Pregenerated sensors for SPATA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026226Ensembl transcript IDs: ENSMUST00000052854.13, ENSMUST00000113344.8, ENSMUST00000125083.2, ENSMUST00000130504.8, ENSMUST00000131151.3, ENSMUST00000135440.2, ENSMUST00000149469.3, ENSMUST00000152501.8, ENSMUST00000153247.3, ENSMUST00000159876.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGATGACCAGTCCCGAGGTAGGAGGACATCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGCCAGCAAGCGGAGCTGCCCGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: MDDQSRGRRTSKIRL*QSPRRCQQAELPGQ Trigger: CTGCCCGGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGATGTCCTCCTACCTCGGGACTGGTCATCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| 3UTR TCA 90 bp | GCCTATGATGTTTGGAGGAAGTTACACACAGTTGCCAACCAGATCTaGGGACCGAGCCTGGCCCTGGGAACTCTACACCCAAGGCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: AYDVWRKLHTVANQI*GPSLALGTLHPRLF Trigger: AAAAAGCCTTGGGTGTAGAGTTCCCAGGGCCAGGCTCGGTCCTCAGATCTGGTTGGCAACTGTGTGTAACTTCCTCCAAACATCATAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| 3UTR CCA 90 bp | TGTGGAAGGACACCGATATGGAGACAAGGCAGACTTTGTGTGGGATaGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTGTTCACCCTT | + |
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Preference number: 1 (lower is better) Translates to: CGRTPIWRQGRLCVG*FSCVLSSGTRLFTL Trigger: AAGGGTGAACAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATATCGGTGTCCTTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
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| 3UTR TCA 90 bp | GAATTTTGTAGGGAAGCTATAAGAGGTTTGAATGTGAATGGTGGCTaGCTGTGGAAGGACACCGATATGGAGACAAGGCAGACTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: EFCREAIRGLNVNGG*LWKDTDMETRQTLC Trigger: ACACAAAGTCTGCCTTGTCTCCATATCGGTGTCCTTCCACAGTCAGCCACCATTCACATTCAAACCTCTTATAGCTTCCCTACAAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCAGCCCTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCGCCGGACGGTGGGCCTaGGGTCCAATTCACAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: PTQPCFVLRVLPPVIWCTAGRWA*GPIHKD Trigger: ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGC...GGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAGGGCTGGGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGATGGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTGTTCACCCTTCCCACCCCTGCCGGACGGTaGGCCTGGGGTCCAATTCAC | + |
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Preference number: 2 (lower is better) Translates to: VGWFSCVLSSGTRLFTLPTPAGR*AWGPIH Trigger: GTGAATTGGACCCCAGGCCCACCGTCCGGCAGGGGT...GGGAAGGGTGAACAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| 3UTR-3UTR CCA 90 bp | CGATATGGAGACAAGGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTACCCCTGCCGGACGGTaGGCCTGGGGTCCAATTCAC | + |
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Preference number: 2 (lower is better) Translates to: RYGDKADFVWDGFPVCCLTPAGR*AWGPIH Trigger: GTGAATTGGACCCCAGGCCCACCGTCCGGCAGGGGT...AAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| 3UTR-3UTR CCA 90 bp | GACTGTTCACCCTTCCCGGGATGGCGTCACCTCATTGTAATAGCAGAGATTATGGCCGGACGGTGGGCCTaGGGTCCAATTCACAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: DCSPFPGWRHLIVIAEIMAGRWA*GPIHKD Trigger: ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGC...CATAATCTCTGCTATTACAATGAGGTGACGCCATCCCGGGAAGGGTGAACAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTCCCACCCAGCCCTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGGACAGGAGTGGTGACTaGAGACATCTTCATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPPTQPCFVLRVLPPVIWDRSGD*RHLHMQ Trigger: CTGCATATGAAGATGTCTTCAGTCACCACTCCTGTC...CCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAGGGCTGGGTGGGAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR CAA 90 bp | GTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTTGGGTCTTaGCTTCTGGGTTCAGGTGAGACAGGAGTGGTGACTGAAGACATC | + |
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Preference number: 2 (lower is better) Translates to: VLPPVIWCTQSLFGS*LLGSGETGVVTEDI Trigger: GATGTCTTCAGTCACCACTCCTGTCTCACCTGAACCCAGAAGCAAAGACCCAAACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLFRRNGFAFEKPMMFGGAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...TCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| 3UTR-3UTR CCA 90 bp | TATAAGAGGTTTGAATGTGAATGGTGGCTGACTGTGGAAGGACACCGATATGGAGCCGGACGGTGGGCCTaGGGTCCAATTCACAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: YKRFECEWWLTVEGHRYGAGRWA*GPIHKD Trigger: ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGC...TCCATATCGGTGTCCTTCCACAGTCAGCCACCATTCACATTCAAACCTCTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAGCTTCGTGTCTCTTGAGGAAGAGCATCTGTTGTACAGATAACATTCTACCTCCCACCCAGCCCTaGTTTGTCCTGAGAGTACTT | + |
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Preference number: 2 (lower is better) Translates to: REASCLLRKSICCTDNILPPTQP*FVLRVL Trigger: AAGTACTCTCAGGACAAAGCAGGGCTGGGTGGGAGG...TAGAATGTTATCTGTACAACAGATGCTCTTCCTCAAGAGACACGAAGCTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGATAACATTCTAGGACTCCACAGGGATGAAGCCTTCCCTTCTTCCTTTTGCTTGGGTCTTTGCTTCTaGGTTCAGGTGAGACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TDNILGLHRDEAFPSSFCLGLCF*VQVRQE Trigger: CTCCTGTCTCACCTGAACCCAGAAGCAAAGACCCAA...GCAAAAGGAAGAAGGGAAGGCTTCATCCCTGTGGAGTCCTAGAATGTTATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTTGTGAGACAGGAGTGGTaGCTGAAGACATCTTCATAT | + |
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Preference number: 2 (lower is better) Translates to: CFVLRVLPPVIWCTQSLFVRQEW*LKTSSY Trigger: ATATGAAGATGTCTTCAGTCACCACTCCTGTCTCAC...AAACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCACAGAGCAAATGACACAAAAGATGTACAGACATCCCCATAAACAGCAAAAGGCAGACTTTGTGTaGGATGGTTTTCCTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCTEQMTQKMYRHPHKQQKADFV*DGFPVC Trigger: GCACACAGGAAAACCATCCCACACAAAGTCTGCCTT...TTGCTGTTTATGGGGATGTCTGTACATCTTTTGTGTCATTTGCTCTGTGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTTAATATAAATGAGCAGTaGCAGAGATCACACACATTC | + |
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Preference number: 2 (lower is better) Translates to: CFVLRVLPPVIWCTQSLFNINEQ*QRSHTF Trigger: GAATGTGTGTGATCTCTGCCACTGCTCATTTATATT...AAACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR GCA 72 bp | ACATCAAAGATTCGGCTATGGCAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCCGGGCAGGCTGCACAG | + |
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Preference number: 3 (lower is better) Translates to: TSKIRLWQSPRR*QQAELPGQAAQ Trigger: CTGTGCAGCCTGCCCGGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| 3UTR GCA 72 bp | ATGCATAGCATGAGCTTGGTACAGGCGGGAGAACACTaGCGGACGGTGGGCCTGGGGTCCAATTCACAAGGA | + |
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Preference number: 3 (lower is better) Translates to: MHSMSLVQAGEH*RTVGLGSNSQG Trigger: TCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGTGTTCTCCCGCCTGTACCAAGCTCATGCTATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR CCA 72 bp | CAGTCCCGAGGTAGGAGGACATCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGCCAGCAAGCGGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: QSRGRRTSKIRL*QSPRRCQQAEL Trigger: CAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGATGTCCTCCTACCTCGGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| 3UTR CCA 72 bp | TACACACAGTTGCCAACCAGATCTGAGGACCGAGCCTaGCCCTGGGAACTCTACACCCAAGGCTTTTTAGCC | + |
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Preference number: 3 (lower is better) Translates to: YTQLPTRSEDRA*PWELYTQGFLA Trigger: GGCTAAAAAGCCTTGGGTGTAGAGTTCCCAGGGCCAGGCTCGGTCCTCAGATCTGGTTGGCAACTGTGTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| 3UTR TCA 72 bp | AGAGATCACACACATTCCAAAGAAGCATGCATAGCATaGGCTTGGTACAGGCGGGAGAACACTGCCGGACGG | + |
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Preference number: 3 (lower is better) Translates to: RDHTHSKEACIA*AWYRRENTAGR Trigger: CCGTCCGGCAGTGTTCTCCCGCCTGTACCAAGCTCATGCTATGCATGCTTCTTTGGAATGTGTGTGATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| 3UTR CCA 72 bp | TGTCTTCAGGGACAAGACTGTTCACCCTTCCCGGGATaGCGTCACCTCATTGTAATAGCAGAGATTATGCTG | + |
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Preference number: 3 (lower is better) Translates to: CLQGQDCSPFPG*RHLIVIAEIML Trigger: CAGCATAATCTCTGCTATTACAATGAGGTGACGCCATCCCGGGAAGGGTGAACAGTCTTGTCCCTGAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
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| 3UTR CCA 72 bp | ACACCGATATGGAGACAAGGCAGACTTTGTGTGGGATaGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTG | + |
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Preference number: 3 (lower is better) Translates to: TPIWRQGRLCVG*FSCVLSSGTRL Trigger: CAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATATCGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
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| 3UTR TCA 72 bp | AGGGAAGCTATAAGAGGTTTGAATGTGAATGGTGGCTaGCTGTGGAAGGACACCGATATGGAGACAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: REAIRGLNVNGG*LWKDTDMETRQ Trigger: CTGCCTTGTCTCCATATCGGTGTCCTTCCACAGTCAGCCACCATTCACATTCAAACCTCTTATAGCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
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| 3UTR TCA 72 bp | TTCTCTCTATCTATTTTGGTGACAAGTAAGATCCTTTaGTGGAAACTGGATCTGCCGGACGGTGGGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: FSLSILVTSKIL*WKLDLPDGGPG Trigger: CCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTGTCACCAAAATAGATAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131151.3 ENSMUST00000159876.8 |
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| 3UTR TCA 72 bp | TATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATaGTGTTTGGAGGAAGTTACACACAGTTGCCAACCA | + |
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Preference number: 3 (lower is better) Translates to: YLEGTALLLKSL*CLEEVTHSCQP Trigger: TGGTTGGCAACTGTGTGTAACTTCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125083.2 ENSMUST00000135440.2 ENSMUST00000152501.8 |
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| 3UTR GCA 72 bp | CAAGAGAAAAACAAGTTATTAATGAGGCAGTGCCTGTaGACAGAGCAAATGACACAAAAGATGTACAGACAT | + |
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Preference number: 3 (lower is better) Translates to: QEKNKLLMRQCL*TEQMTQKMYRH Trigger: ATGTCTGTACATCTTTTGTGTCATTTGCTCTGTGCACAGGCACTGCCTCATTAATAACTTGTTTTTCTCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCCAGACGATGCCAGCAAGCGGAGCTGCCCGGGCAGGCTGCACAGGAGCACTGCAGGAACGGAGATaGGGCAGGTTTCTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KPQTMPASGAARAGCTGALQERR*GRFLWR Trigger: CCTCCAGAGAAACCTGCCTCATCTCCGTTCCTGCAG...TGCTCCTGTGCAGCCTGCCCGGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| CDS-3UTR GCA 90 bp | ACGCAGAGTGGCATAGTTGGGGTGCCATGCCATGAACCCCTGCCGGACGGTGGGCAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TQSGIVGVPCHEPLPDGGQSPRR*QQAELP Trigger: GGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTG...CCCACCGTCCGGCAGGGGTTCATGGCATGGCACCCCAACTATGCCACTCTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| CDS-3UTR GCA 90 bp | CAGAGTGGCATAGTTGGGGTGCCATGCCATGAACCCCTGCCGGACGGTGGGCCTCAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QSGIVGVPCHEPLPDGGPQSPRR*QQAELP Trigger: GGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTG...AGGCCCACCGTCCGGCAGGGGTTCATGGCATGGCACCCCAACTATGCCACTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| CDS-3UTR GCA 90 bp | CAAGTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: QVRSFDGNWICRTVGLGSAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...GGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR GCA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: PLMETGSAGRWAWGPIHKAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR GCA 90 bp | AGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCAGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSFDGNWICRTVGLGSNSAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...TGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR CCA 90 bp | CAGAGTGGCATAGTTGGGGTGCCATGCCATGAACCCCTGCCGGACGGTGGGCCTCTCCTCTCCCTGGCATaGATGACCAGTCCCGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: QSGIVGVPCHEPLPDGGPLLSLA*MTSPEV Trigger: TACCTCGGGACTGGTCATCCATGCCAGGGAGAGGAG...AGGCCCACCGTCCGGCAGGGGTTCATGGCATGGCACCCCAACTATGCCACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| CDS-3UTR CCA 90 bp | ATTCGGCTATGGCAAAGCCCCAGACGATGCCAGCAAGCGGAGCTGCCCGGGCAGGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: IRLWQSPRRCQQAELPGQGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...CTGCCCGGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTGCCATAGCCGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
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| CDS-3UTR TCA 90 bp | TCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAACGGCCTGAGACGGACTaGCTTGGGGTCTCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SFDGNWICRTVGLGSNSQRPETD*LGVSGC Trigger: GCAACCGGAGACCCCAAGTCAGTCCGTCTCAGGCCG...TTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
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| CDS-3UTR GCA 90 bp | TCCAGTTATCTGGTGCACCCAGTCCTTGTTTGGGTCTTTGCTTCTGGGTTCAGGGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSYLVHPVLVWVFASGFRAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...CCTGAACCCAGAAGCAAAGACCCAAACAAGGACTGGGTGCACCAGATAACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| CDS-3UTR GCA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGCAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLMETGSAGRWAWGPIHKQSPRR*QQAELP Trigger: GGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTG...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR CCA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATACGTCCAGGACACCCTaGGGGCGGCTGGGACAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LMETGSAGRWAWGPIHKDTSRTP*GRLGQN Trigger: GTTCTGTCCCAGCCGCCCCCAGGGTGTCCTGGACGT...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
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| CDS-3UTR GCA 90 bp | TTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGACAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: FDGNWICRTVGLGSNSQGQSPRR*QQAELP Trigger: GGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTG...TCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR GCA 90 bp | CAAGTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCCCAGGAGCAGCTGCTTaGCGGGCTCTGAGCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QVRSFDGNWICRTVGLGSPGAAA*RALSLA Trigger: AGCTAAGCTCAGAGCCCGGCAAGCAGCTGCTCCTGG...GGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
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| CDS-3UTR CCA 90 bp | CAAGTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCCTGTGGCTTAGATGGTaGCGAGGCGGGCTCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: QVRSFDGNWICRTVGLGSLWLRW*RGGLWT Trigger: TGTCCAGAGCCCGCCTCGCCACCATCTAAGCCACAG...GGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131151.3 ENSMUST00000159876.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCCACCCAGCCCTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGACAGGAGCAGGAGCGTaGGGCCACATAGGTCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASHPALLCPESTSSSYLVTGAGA*GHIGQR Trigger: CCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGT...CACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAGGGCTGGGTGGGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
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| CDS-3UTR CCA 90 bp | GAAGTTACACACAGTTGCCAACCAGATCTGAGGACCGAGCCTGGCCCTGGGAACACAGGAGCAGGAGCGTaGGGCCACATAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTHSCQPDLRTEPGPGNTGAGA*GHIGQR Trigger: CCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGT...GTTCCCAGGGCCAGGCTCGGTCCTCAGATCTGGTTGGCAACTGTGTGTAACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATAGCACCAGGAGCAGCTaGTTGCCGGGCTCTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRSFDGNWICRTVGLGSNSTRSS*LPGSEL Trigger: AAGCTCAGAGCCCGGCAAGCAGCTGCTCCTGGTGCT...ATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCCCACCCAGCCCTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGCTGTGGCTTAGATGGTaGCGAGGCGGGCTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPPTQPCFVLRVLPPVIWLWLRW*RGGLWT Trigger: TGTCCAGAGCCCGCCTCGCCACCATCTAAGCCACAG...CCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAGGGCTGGGTGGGAGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATACAGGAGCAGGAGCGTaGGGCCACATAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMETGSAGRWAWGPIHKDTGAGA*GHIGQR Trigger: CCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGT...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATACAGGAGCAGGAGCGTaGGGCCACATAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRSFDGNWICRTVGLGSNTGAGA*GHIGQR Trigger: CCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGT...ATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCAGCCCTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCCTCCTCTCCCTGGCATaGATGACCAGTCCCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTQPCFVLRVLPPVIWCTLLSLA*MTSPEV Trigger: TACCTCGGGACTGGTCATCCATGCCAGGGAGAGGAG...GGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAGGGCTGGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGACTCCACAGGGATGAAGCCTTCCCTTCTTCCTTTTGCCTTTGCTCTTGCCAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHRDEAFPSSFCLCSCQSPRR*QQAELP Trigger: GGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTG...GCAAGAGCAAAGGCAAAAGGAAGAAGGGAAGGCTTCATCCCTGTGGAGTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DPLMETGSAGRWAWGPIHGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...GTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131151.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLMETGSAGRWAWGPIHKGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131151.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAACTCCTCTCCCTGGCATaGATGACCAGTCCCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFDGNWICRTVGLGSNSQLLSLA*MTSPEV Trigger: TACCTCGGGACTGGTCATCCATGCCAGGGAGAGGAG...TTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATCTCCTCTCCCTGGCATaGATGACCAGTCCCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMETGSAGRWAWGPIHKDLLSLA*MTSPEV Trigger: TACCTCGGGACTGGTCATCCATGCCAGGGAGAGGAG...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR TCA 90 bp | TTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATACCAGGAACGGAGATaGGGCAGGTTTCTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDGNWICRTVGLGSNSQGYQERR*GRFLWR Trigger: CCTCCAGAGAAACCTGCCTCATCTCCGTTCCTGGTA...TCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131151.3 ENSMUST00000159876.8 |
||
| CDS-3UTR GCA 90 bp | TGGCGTCACCTCATTGTAATAGCAGAGATTATGCTGTTCTCAGGTAGATCAGAGGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRHLIVIAEIMLFSGRSEAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...CTCTGATCTACCTGAGAACAGCATAATCTCTGCTATTACAATGAGGTGACGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTGGCATAGTTGGGGTGCCATGCCATGAACCCCTGCCGGACGGTGGGCCTTCCTTGACGGTTTTCTaGTTTCCTGCTTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSGIVGVPCHEPLPDGGPSLTVF*FPAWKN Trigger: ATTCTTCCAAGCAGGAAAGCAGAAAACCGTCAAGGA...AGGCCCACCGTCCGGCAGGGGTTCATGGCATGGCACCCCAACTATGCCACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | GATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DPLMETGSAGRWAWGPIHEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...GTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTTACACACAGTTGCCAACCAGATCTGAGGACCGAGCCTGGCCCTGGGAACGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVTHSCQPDLRTEPGPGNEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...GTTCCCAGGGCCAGGCTCGGTCCTCAGATCTGGTTGGCAACTGTGTGTAACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCCTGTTGCTTGGGTGTTaGGCAGGGTCGTGTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVRSFDGNWICRTVGLGSLLLGC*AGSCSF Trigger: AAAGCTACACGACCCTGCCCAACACCCAAGCAACAG...GGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR GCA 90 bp | CCCACCCAGCCCTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCGTGAAATGGAATTCCTaGGGCGCCTGGAATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PTQPCFVLRVLPPVIWCTVKWNS*GAWNQT Trigger: AGTCTGATTCCAGGCGCCGCAGGAATTCCATTTCAC...GGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAGGGCTGGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGGTCAGAGGCACTGCTaGTTTCCTGCTTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLMETGSAGRWAWGPIHKGQRHC*FPAWKN Trigger: ATTCTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACC...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159876.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTTACACACAGTTGCCAACCAGATCTGAGGACCGAGCCTGGCCCTGGGAACATAGGTCAGAGGCACTaGTGCTTTCCTGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVTHSCQPDLRTEPGPGNIGQRH*CFPAWK Trigger: CTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACCTAT...GTTCCCAGGGCCAGGCTCGGTCCTCAGATCTGGTTGGCAACTGTGTGTAACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135440.2 |
||
| CDS-3UTR GCA 90 bp | AGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCAACTTTGGCAGTCTGTTaGTTGGGTGTTGGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSFDGNWICRTVGLGSNSTLAVC*LGVGQG Trigger: ACCCTGCCCAACACCCAAGCAACAGACTGCCAAAGT...TGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTACAGGAGCAGGAGCGTaGGGCCACATAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQTLCGMVFLCAVFRDKTTGAGA*GHIGQR Trigger: CCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGT...AGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGTCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PLMETGSAGRWAWGPIHKSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR CCA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMETGSAGRWAWGPIHKDEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFDGNWICRTVGLGSNSQEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...TTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR TCA 90 bp | GATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAGCGCAGTACTTCCTTaGCGGTTTTCTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DPLMETGSAGRWAWGPIHSAVLP*RFSVEG Trigger: ACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCT...GTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS-3UTR GCA 90 bp | AGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCAATAGGTCAGAGGCACTaGTGCTTTCCTGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSFDGNWICRTVGLGSNSIGQRH*CFPAWK Trigger: CTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACCTAT...TGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159876.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGAAAAACAAGTTATTAATGAGGCAGTGCCTGTGCACAGAGCAAATGACAGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEKNKLLMRQCLCTEQMTAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...TGTCATTTGCTCTGTGCACAGGCACTGCCTCATTAATAACTTGTTTTTCTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
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| CDS-3UTR CCA 90 bp | GTAATAGCAGAGATTATGCTGTTCTCAGGTAGATCAGAGAGGGCAGAGACGAGCCTGTGGCTTAGATGGTaGCGAGGCGGGCTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VIAEIMLFSGRSERAETSLWLRW*RGGLWT Trigger: TGTCCAGAGCCCGCCTCGCCACCATCTAAGCCACAG...GCTCGTCTCTGCCCTCTCTGATCTACCTGAGAACAGCATAATCTCTGCTATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAATCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFDGNWICRTVGLGSNSQSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...TTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FDGNWICRTVGLGSNSQGSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...TCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| 3UTR CAA 72 bp | CCAGTTATCTGGTGCACCCAGTCCTTGTTTGGGTCTTaGCTTCTGGGTTCAGGTGAGACAGGAGTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVIWCTQSLFGS*LLGSGETGVVT Trigger: AGTCACCACTCCTGTCTCACCTGAACCCAGAAGCAAAGACCCAAACAAGGACTGGGTGCACCAGATAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR TCA 90 bp | CCGATATGGAGACAAGGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTACCAGGAACGGAGATaGGGCAGGTTTCTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIWRQGRLCVGWFSCVLSYQERR*GRFLWR Trigger: CCTCCAGAGAAACCTGCCTCATCTCCGTTCCTGGTA...AGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATATCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFDGNWICRTVGLGSNSQVFCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAAC...TTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCAGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSFDGNWICRTVGLGSNSVFCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAAC...TGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMETGSAGRWAWGPIHKDVFCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAAC...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCAAGCGCAGTACTTCCTTaGCGGTTTTCTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSFDGNWICRTVGLGSNSSAVLP*RFSVEG Trigger: ACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCT...TGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATAGCGCAGTACTTCCTTaGCGGTTTTCTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMETGSAGRWAWGPIHKDSAVLP*RFSVEG Trigger: ACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCT...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTCCCGTTCATGCGGAACCTGTAGAAGGTGAGAAGGTTTGGGACTCCGTGAAATGGAATTCCTaGGGCGCCTGGAATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FSPPVHAEPVEGEKVWDSVKWNS*GAWNQT Trigger: AGTCTGATTCCAGGCGCCGCAGGAATTCCATTTCAC...GGAGTCCCAAACCTTCTCACCTTCTACAGGTTCCGCATGAACGGGAGGGCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125083.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PETLLFRRNGFAFEKPMMAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...CATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | TTATGCTGTTCTCAGGTAGATCAGAGAGGGCAGAGACGAGCTTCAGTTTCTCAACTGTGGCTTAGATGGTaGCGAGGCGGGCTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LCCSQVDQRGQRRASVSQLWLRW*RGGLWT Trigger: TGTCCAGAGCCCGCCTCGCCACCATCTAAGCCACAG...TTGAGAAACTGAAGCTCGTCTCTGCCCTCTCTGATCTACCTGAGAACAGCATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | CTGTTCACCCTTCCCGGGATGGCGTCACCTCATTGTAATAGCAGAGATTATGCTGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFTLPGMASPHCNSRDYAGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...AGCATAATCTCTGCTATTACAATGAGGTGACGCCATCCCGGGAAGGGTGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCCCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QVRSFDGNWICRTVGLGSPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...GGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131151.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTTGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CFVLRVLPPVIWCTQSLFGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...AAACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCAGAGATTATGCTGTTCTCAGGTAGATCAGAGAGGGCAGAGACGAGCTTCGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IAEIMLFSGRSERAETSFGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...GAAGCTCGTCTCTGCCCTCTCTGATCTACCTGAGAACAGCATAATCTCTGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATCCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LMETGSAGRWAWGPIHKDPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131151.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTGTAATAGCAGAGATTATGCTGTTCTCAGGTAGATCAGAGAGGGCAGAGACAGGAGCAGGAGCGTaGGGCCACATAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIVIAEIMLFSGRSERAETGAGA*GHIGQR Trigger: CCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGT...CTCTGCCCTCTCTGATCTACCTGAGAACAGCATAATCTCTGCTATTACAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGAGACAAGGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCACTCCTCTCCCTGGCATaGATGACCAGTCCCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IWRQGRLCVGWFSCVLSSLLSLA*MTSPEV Trigger: TACCTCGGGACTGGTCATCCATGCCAGGGAGAGGAG...TGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGCACTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLMETGSAGRWAWGPIHKHCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGTG...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131151.3 |
||
| CDS-3UTR TCA 90 bp | GCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTGTAGCGCAGTACTTCCTTaGCGGTTTTCTGCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADFVWDGFPVCCLQGQDCSAVLP*RFSAFL Trigger: CAGGAAAGCAGAAAACCGTCAAGGAAGTACTGCGCT...ACAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153247.3 |
||
| CDS-3UTR TCA 90 bp | GCAGAGATTATGCTGTTCTCAGGTAGATCAGAGAGGGCAGAGACGAGCTTCAGTACAAGGATTCAGCCATaGAGTAGGCAACTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEIMLFSGRSERAETSFSTRIQP*SRQLPR Trigger: CCTTGGGAGTTGCCTACTTCATGGCTGAATCCTTGT...ACTGAAGCTCGTCTCTGCCCTCTCTGATCTACCTGAGAACAGCATAATCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153247.3 |
||
| CDS-3UTR GCA 90 bp | CCGATATGGAGACAAGGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTGTGAAATGGAATTCCTaGGGCGCCTGGAATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PIWRQGRLCVGWFSCVLSVKWNS*GAWNQT Trigger: AGTCTGATTCCAGGCGCCGCAGGAATTCCATTTCAC...AGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR GCA 90 bp | ACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLFRRNGFAFEKPMMFGAARAG*TGAGAW Trigger: CCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGC...TCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTGAAAAGCCTATGATGTTTGGAGGAAGTTACACACAGTTGCCAACCAGACTGTGGCTTAGATGGTaGCGAGGCGGGCTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AFEKPMMFGGSYTQLPTRLWLRW*RGGLWT Trigger: TGTCCAGAGCCCGCCTCGCCACCATCTAAGCCACAG...TCTGGTTGGCAACTGTGTGTAACTTCCTCCAAACATCATAGGCTTTTCAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125083.2 ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | GATGGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTGTTCACCCTTCCCGGGACCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DGFPVCCLQGQDCSPFPGPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...TCCCGGGAAGGGTGAACAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | AGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCATGCTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSFDGNWICRTVGLGSNSCCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGCA...TGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159876.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTTCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCPESTSSSYLVHPVLVSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...AACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTTGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFVLRVLPPVIWCTQSLFEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...AAACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR CCA 90 bp | TATGGAGACAAGGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCAGGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YGDKADFVWDGFPVCCLQEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...CTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| 3UTR CAA 72 bp | AGAGTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTaGTTTGGGTCTTTGCTTCTGGGTTCAGGTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RVLPPVIWCTQS*FGSLLLGSGET Trigger: TGTCTCACCTGAACCCAGAAGCAAAGACCCAAACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGAGGAAGAGCATCTGTTGTACAGATAACATTCTAGGACTCCACAGGGATTACCAGGAACGGAGATaGGGCAGGTTTCTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRKSICCTDNILGLHRDYQERR*GRFLWR Trigger: CCTCCAGAGAAACCTGCCTCATCTCCGTTCCTGGTA...ATCCCTGTGGAGTCCTAGAATGTTATCTGTACAACAGATGCTCTTCCTCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTGTGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADFVWDGFPVCCLQGQDCVFCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAAC...ACAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTCACCCTTCCCGGGATGGCGTCACCTCATTGTAATAGCAGAGATTATGCTAGCGCAGTACTTCCTTaGCGGTTTTCTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTLPGMASPHCNSRDYASAVLP*RFSVEG Trigger: ACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCT...AGCATAATCTCTGCTATTACAATGAGGTGACGCCATCCCGGGAAGGGTGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR TCA 90 bp | GTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTTGGGTCTTTGCTTCTGAGCGCAGTACTTCCTTaGCGGTTTTCTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLPPVIWCTQSLFGSLLLSAVLP*RFSVEG Trigger: ACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCT...CAGAAGCAAAGACCCAAACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR TCA 90 bp | GATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAGCTTTCATCCTGCTTaGAGAACTCTCTTATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: DPLMETGSAGRWAWGPIHSFHPA*RTLLLT Trigger: TGTTAATAAGAGAGTTCTTCAAGCAGGATGAAAGCT...GTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CCA 90 bp | AGCTATAAGAGGTTTGAATGTGAATGGTGGCTGACTGTGGAAGGACACCGATATGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYKRFECEWWLTVEGHRYGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...ATATCGGTGTCCTTCCACAGTCAGCCACCATTCACATTCAAACCTCTTATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTATCTGGTGCACCCAGTCCTTGTTTGGGTCTTTGCTTCTGGGTTCAGGCCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSYLVHPVLVWVFASGFRPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...CCTGAACCCAGAAGCAAAGACCCAAACAAGGACTGGGTGCACCAGATAACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCTCAGGTAGATCAGAGAGGGCAGAGACGAGCTTCAGTTTCTCAATGACTTCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSGRSERAETSFSFSMTSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...AGTCATTGAGAAACTGAAGCTCGTCTCTGCCCTCTCTGATCTACCTGAGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTGAAAAGCCTATGATGTTTGGAGGAAGTTACACACAGTTGCCAACCAGACTCCTCTCCCTGGCATaGATGACCAGTCCCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AFEKPMMFGGSYTQLPTRLLSLA*MTSPEV Trigger: TACCTCGGGACTGGTCATCCATGCCAGGGAGAGGAG...TCTGGTTGGCAACTGTGTGTAACTTCCTCCAAACATCATAGGCTTTTCAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGAGACAAGGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCAGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IWRQGRLCVGWFSCVLSSEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...TGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCCTTGTCTCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGACAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFRRNGFAFEKPMMFGGQSPRR*QQAELP Trigger: GGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTG...TCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | GCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTGTCCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ADFVWDGFPVCCLQGQDCPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...ACAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | GACTGTTCACCCTTCCCGGGATGGCGTCACCTCATTGTAATAGCAGAGATTATGCCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DCSPFPGWRHLIVIAEIMPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...CATAATCTCTGCTATTACAATGAGGTGACGCCATCCCGGGAAGGGTGAACAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | CCCACCAAACCAGAGACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCTCCTCTCCCTGGCATaGATGACCAGTCCCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTKPETLLFRRNGFAFEKLLSLA*MTSPEV Trigger: TACCTCGGGACTGGTCATCCATGCCAGGGAGAGGAG...CTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGTCTCTGGTTTGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGACTTTGTGTGGGATGGTTTTCCTGTGTGCTGTCTTCAGGGACAAGACTGCACTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRLCVGWFSCVLSSGTRLHCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGTG...CAGTCTTGTCCCTGAAGACAGCACACAGGAAAACCATCCCACACAAAGTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130504.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGCAGTGGCAGAGATCACACACATTCCAAAGAAGCATGCATAGCATGAGCGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NEQWQRSHTFQRSMHSMSVFCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAAC...GCTCATGCTATGCATGCTTCTTTGGAATGTGTGTGATCTCTGCCACTGCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGATCAGAGAGGGCAGAGACGAGCTTCAGTTTCTCAATGACTTTCTTCTTAGTGAAATGGAATTCCTaGGGCGCCTGGAATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GRSERAETSFSFSMTFFLVKWNS*GAWNQT Trigger: AGTCTGATTCCAGGCGCCGCAGGAATTCCATTTCAC...TAAGAAGAAAGTCATTGAGAAACTGAAGCTCGTCTCTGCCCTCTCTGATCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR GCA 90 bp | TATAAGAGGTTTGAATGTGAATGGTGGCTGACTGTGGAAGGACACCGATATGGAGGTCAGAGGCACTGCTaGTTTCCTGCTTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKRFECEWWLTVEGHRYGGQRHC*FPAWKN Trigger: ATTCTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACC...TCCATATCGGTGTCCTTCCACAGTCAGCCACCATTCACATTCAAACCTCTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052854.13 |
||
| CDS-3UTR GCA 90 bp | AGCTATAAGAGGTTTGAATGTGAATGGTGGCTGACTGTGGAAGGACACCGATATATAGGTCAGAGGCACTaGTGCTTTCCTGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYKRFECEWWLTVEGHRYIGQRH*CFPAWK Trigger: CTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACCTAT...ATATCGGTGTCCTTCCACAGTCAGCCACCATTCACATTCAAACCTCTTATAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052854.13 |
||
| CDS-3UTR GCA 90 bp | ACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGACAAAGCCCCAGACGATaGCAGCAAGCGGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLFRRNGFAFEKPMMFGQSPRR*QQAELP Trigger: GGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTG...TCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | CCACCAAACCAGAGACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPNQRHCYLEGTALLLKSGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...GCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGTCTCTGGTTTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125083.2 ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAAGTACAGGAGCAGGAGCGTaGGGCCACATAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRRNGFAFEKPMMFGGSTGAGA*GHIGQR Trigger: CCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGT...ACTTCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTGTCCTGAGAGTACTTCCTCCAGTTATCTGGTGCACCCAGTCCTTGTTCACTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCPESTSSSYLVHPVLVHCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGTG...AACAAGGACTGGGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAGACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTACCAGGAACGGAGATaGGGCAGGTTTCTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PETLLFRRNGFAFEKPMMYQERR*GRFLWR Trigger: CCTCCAGAGAAACCTGCCTCATCTCCGTTCCTGGTA...CATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGTCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR TCA 90 bp | CTCATTGTAATAGCAGAGATTATGCTGTTCTCAGGTAGATCAGAGAGGGCAGAGGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVIAEIMLFSGRSERAEVFCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAAC...CTCTGCCCTCTCTGATCTACCTGAGAACAGCATAATCTCTGCTATTACAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCAAACCAGAGACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGGGAACCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTKPETLLFRRNGFAFEKGTCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGGTTCC...CTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGTCTCTGGTTTGGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCTCAGGTAGATCAGAGAGGGCAGAGACGAGCTTCAGTTTCTCAATGACTTGCTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSGRSERAETSFSFSMTCCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGCA...AGTCATTGAGAAACTGAAGCTCGTCTCTGCCCTCTCTGATCTACCTGAGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052854.13 |
||
| CDS-3UTR CCA 90 bp | CTGTGCACAGAGCAAATGACACAAAAGATGTACAGACATCCCCATAAACAGCAATCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LCTEQMTQKMYRHPHKQQSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...TTGCTGTTTATGGGGATGTCTGTACATCTTTTGTGTCATTTGCTCTGTGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGTACAGACATCCCCATAAACAGCAAGAATTTTGTAGGGAAGCTATAAGATACCAGGAACGGAGATaGGGCAGGTTTCTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KMYRHPHKQQEFCREAIRYQERR*GRFLWR Trigger: CCTCCAGAGAAACCTGCCTCATCTCCGTTCCTGGTA...TCTTATAGCTTCCCTACAAAATTCTTGCTGTTTATGGGGATGTCTGTACATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CCA 90 bp | ACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLFRRNGFAFEKPMMFGGVVDS*QGCGLD Trigger: ATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACC...TCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125083.2 ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR TCA 90 bp | ACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAACCTGTAGAAGGTaGGAAGGTTTGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLFRRNGFAFEKPMMFGGTCRR*EGLGLL Trigger: GAGGAGTCCCAAACCTTCTCACCTTCTACAGGTTCC...TCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAGTGAAATGGAATTCCTaGGGCGCCTGGAATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLFRRNGFAFEKPMMFGGVKWNS*GAWNQT Trigger: AGTCTGATTCCAGGCGCCGCAGGAATTCCATTTCAC...TCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125083.2 ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAGGTCAGAGGCACTGCTaGTTTCCTGCTTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFRRNGFAFEKPMMFGGGQRHC*FPAWKN Trigger: ATTCTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACC...TCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135440.2 |
||
| CDS-3UTR CCA 90 bp | CCACCAAACCAGAGACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PPNQRHCYLEGTALLLKSPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...GCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGTCTCTGGTTTGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAAGTTCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFRRNGFAFEKPMMFGGSSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...ACTTCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | ACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGAAGGTGAGAAGGTTTaGGACTCCTCTCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLFRRNGFAFEKPMMFGEGEKV*DSSPWH Trigger: ATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTC...TCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGATCAGAGAGGGCAGAGACGAGCTTCAGTTTCTCAATGACTTTCTTCTTATTCTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRSERAETSFSFSMTFFLFCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGAA...TAAGAAGAAAGTCATTGAGAAACTGAAGCTCGTCTCTGCCCTCTCTGATCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153247.3 |
||
| CDS-3UTR TCA 90 bp | AAGATGTACAGACATCCCCATAAACAGCAAGAATTTTGTAGGGAAGCTATAAGAAGCGCAGTACTTCCTTaGCGGTTTTCTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KMYRHPHKQQEFCREAIRSAVLP*RFSVEG Trigger: ACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCT...TCTTATAGCTTCCCTACAAAATTCTTGCTGTTTATGGGGATGTCTGTACATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 |
||
| CDS-3UTR CCA 90 bp | ACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGATCAAAGATTCGGCTATaGCAAAGCCCCAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLFRRNGFAFEKPMMFGSKIRL*QSPRRC Trigger: GCATCGTCTGGGGCTTTGCCATAGCCGAATCTTTGA...TCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAAGTCCTGCTTGGAAGAATTaGTTTAGGTTCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LFRRNGFAFEKPMMFGGSPAWKN*FRFHGY Trigger: GTACCCATGGAACCTAAACCAATTCTTCCAAGCAGG...ACTTCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135440.2 ENSMUST00000152501.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTGGAGGAAGTTGCTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFRRNGFAFEKPMMFGGSCCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGCA...ACTTCCTCCAAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135440.2 |
||
| CDS-3UTR CCA 90 bp | GAGACATTGTTATTTAGAAGGAACGGCTTTGCTTTTGAAAAGCCTATGATGTTTCACTGCTTTCCTGCTTaGAAGAATTGGTTTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETLLFRRNGFAFEKPMMFHCFPA*KNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGTG...AAACATCATAGGCTTTTCAAAAGCAAAGCCGTTCCTTCTAAATAACAATGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152501.8 |
||
| CDS GCA 90 bp | TCCCCCAGACGGCGGCGCGACTCGTCCTCCTCATCCGGCCGCGGCTaGACCAGGATCCCGACGAGCGCGGCTGGCGGGCGACGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRRRRDSSSSSGRG*TRIPTSAAGGRRSW Trigger: CCAGGAGCGTCGCCCGCCAGCCGCGCTCGTCGGGATCCTGGTGCAGCCGCGGCCGGATGAGGAGGACGAGTCGCGCCGCCGTCTGGGGGA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CCA 90 bp | CTCCTCATCCGGCCGCGGCTGCACCAGGATCCCGACGAGCGCGGCTaGCGGGCGACGCTCCTGGACCCGTACCTGCTGCAGGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLIRPRLHQDPDERG*RATLLDPYLLQEQL Trigger: CAGCTGCTCCTGCAGCAGGTACGGGTCCAGGAGCGTCGCCCGCCAGCCGCGCTCGTCGGGATCCTGGTGCAGCCGCGGCCGGATGAGGAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS GCA 90 bp | GCAAAGCCCCAGACGATGCCAGCAAGCGGAGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGGGGCCACATAGGTCAGAGGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: AKPQTMPASGAARAG*TGAGAWGHIGQRHC Trigger: GCAGTGCCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000130504.8 ENSMUST00000131151.3 ENSMUST00000135440.2 ENSMUST00000152501.8 ENSMUST00000159876.8 |
||
| CDS GCA 90 bp | GCAAAGCCCCAGACGATGCCAGCAAGCGGAGCTGCCCGGGCAGGCTaGACAGGAGCAGGAGCGTGGGGCCACATAGGTCAGAGGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: AKPQTMPASGAARAG*TGAGAWGHIGQRHI Trigger: GATGTGCCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGTGCAGCCTGCCCGGGCAGCTCCGCTTGCTGGCATCGTCTGGGGCTTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CCA 90 bp | ACCATGTGCGCTTGGTTATCAGCGCGCTGGACGTCCAGGACACCCTaGGGGCGGCTGGGACAGAACACTGCTGTGTGCACCTCGACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TMCAWLSARWTSRTP*GRLGQNTAVCTSTP Trigger: GGGGGTCGAGGTGCACACAGCAGTGTTCTGTCCCAGCCGCCCCCAGGGTGTCCTGGACGTCCAGCGCGCTGATAACCAAGCGCACATGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCGCCGGGGCTTCGGGGTaGTCCGCCAAGCTGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVRSFDGNWICRTVGLGSAGASG*SAKLSL Trigger: CAGCGACAGCTTGGCGGACAACCCCGAAGCCCCGGC...GGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS GCA 90 bp | GGCGAGGCGGGCTCTGGACATGACGGCGGGGTTTCTGAGCTGGGCTaGTGTGAGGAATCGGAGCTAGTCTGCGGTGAAATGGAATTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GEAGSGHDGGVSELG*CEESELVCGEMEFL Trigger: CAGGAATTCCATTTCACCGCAGACTAGCTCCGATTCCTCACAGCAGCCCAGCTCAGAAACCCCGCCGTCATGTCCAGAGCCCGCCTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000125083.2 ENSMUST00000130504.8 ENSMUST00000135440.2 ENSMUST00000152501.8 ENSMUST00000153247.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATCCTTCTTTGGGGCTCTaGAGGGCTGCTCCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRSFDGNWICRTVGLGSNPSLGL*RAAPQA Trigger: GGCCTGGGGAGCAGCCCTCAAGAGCCCCAAAGAAGG...ATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CAA 90 bp | AGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCAACCAGGAGCAGCTGCTaGCCGGGCTCTGAGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSFDGNWICRTVGLGSNSTRSSC*PGSELS Trigger: GCTAAGCTCAGAGCCCGGCAAGCAGCTGCTCCTGGT...TGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS GCA 90 bp | GGCGGGGTTTCTGAGCTGGGCTGCTGTGAGGAATCGGAGCTAGTCTaGGGTGAAATGGAATTCCTGCGGCGCCTGGAATCAGACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGVSELGCCEESELV*GEMEFLRRLESDFF Trigger: GAAAAAGTCTGATTCCAGGCGCCGCAGGAATTCCATTTCACCGCAGACTAGCTCCGATTCCTCACAGCAGCCCAGCTCAGAAACCCCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000125083.2 ENSMUST00000130504.8 ENSMUST00000135440.2 ENSMUST00000152501.8 ENSMUST00000153247.3 ENSMUST00000159876.8 |
||
| CDS GCA 90 bp | GGCTGCACAGGAGCAGGAGCGTGGGGCCACATAGGTCAGAGGCACTaGTTTCCTGCTTGGAAGAATTGGTTTAGGTTCCATGGGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCTGAGAWGHIGQRH*FPAWKNWFRFHGYQ Trigger: CTGGTACCCATGGAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGTGCCTCTGACCTATGTGGCCCCACGCTCCTGCTCCTGTGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113344.8 ENSMUST00000130504.8 ENSMUST00000131151.3 ENSMUST00000152501.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATTTGGCAGTCTGTTGCTaGGGTGTTGGGCAGGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LMETGSAGRWAWGPIHKDLAVCC*GVGQGR Trigger: ACGACCCTGCCCAACACCCAAGCAACAGACTGCCAA...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CAA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGTACTTTGGCAGTCTGTaGCTTGGGTGTTGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLMETGSAGRWAWGPIHKYFGSL*LGCWAG Trigger: CCCTGCCCAACACCCAAGCAACAGACTGCCAAAGTA...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTAAGATCCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAACAGTTCCGAGAGCTaGAAGCACGAGAGTTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVRSFDGNWICRTVGLGSNSSES*KHESYG Trigger: CCCGTAACTCTCGTGCTTCAAGCTCTCGGAACTGTT...GGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGGATCTTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS TCA 90 bp | AGTTACGGGGAGCGCAGTACTTCCTTGACGGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTCTCCCTGGCATGGATGACCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SYGERSTSLTVFCRR*EGLGLLSLAWMTSP Trigger: GGGACTGGTCATCCATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCTCCCCGTAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000130504.8 ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGATAACAGTTCCGAGAGCTaGAAGCACGAGAGTTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: LMETGSAGRWAWGPIHKDNSSES*KHESYG Trigger: CCCGTAACTCTCGTGCTTCAAGCTCTCGGAACTGTT...ATCCTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTGATGGAAACTGGATCTGCCGGACGGTGGGCCTGGGGTCCAATTCACAAGGTCTCCGGTTGCTCCTaGATCTTTTCCTTCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLMETGSAGRWAWGPIHKVSGCS*IFSFFG Trigger: CCCAAAGAAGGAAAAGATCAAGGAGCAACCGGAGAC...CTTGTGAATTGGACCCCAGGCCCACCGTCCGGCAGATCCAGTTTCCATCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS TCA 90 bp | AAGAACTCTCTTATTAACAGCACCCGACCGCGGCCTGAGACGGACTaGCTTGGGGTCTCCGGTTGCTCCTTGATCTTTTCCTTCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KNSLINSTRPRPETD*LGVSGCSLIFSFFG Trigger: CCCAAAGAAGGAAAAGATCAAGGAGCAACCGGAGACCCCAAGTCAGTCCGTCTCAGGCCGCGGTCGGGTGCTGTTAATAAGAGAGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS-3UTR CAA 90 bp | GCAGAGATTATGCTGTTCTCAGGTAGATCAGAGAGGGCAGAGACGAGCTTCAGTAACAGTTCCGAGAGCTaGAAGCACGAGAGTTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: AEIMLFSGRSERAETSFSNSSES*KHESYG Trigger: CCCGTAACTCTCGTGCTTCAAGCTCTCGGAACTGTT...ACTGAAGCTCGTCTCTGCCCTCTCTGATCTACCTGAGAACAGCATAATCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS-3UTR CAA 90 bp | AATGAGCAGTGGCAGAGATCACACACATTCCAAAGAAGCATGCATAGCATGAGCAACAGTTCCGAGAGCTaGAAGCACGAGAGTTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: NEQWQRSHTFQRSMHSMSNSSES*KHESYG Trigger: CCCGTAACTCTCGTGCTTCAAGCTCTCGGAACTGTT...GCTCATGCTATGCATGCTTCTTTGGAATGTGTGTGATCTCTGCCACTGCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113344.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGTACAGACATCCCCATAAACAGCAAGAATTTTGTAGGGAAGCTATAAGAAACAGTTCCGAGAGCTaGAAGCACGAGAGTTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: KMYRHPHKQQEFCREAIRNSSES*KHESYG Trigger: CCCGTAACTCTCGTGCTTCAAGCTCTCGGAACTGTT...TCTTATAGCTTCCCTACAAAATTCTTGCTGTTTATGGGGATGTCTGTACATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000130504.8 ENSMUST00000153247.3 |
||
| CDS GCA 72 bp | CGGCGGCGCGACTCGTCCTCCTCATCCGGCCGCGGCTaGACCAGGATCCCGACGAGCGCGGCTGGCGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRDSSSSSGRG*TRIPTSAAGGR Trigger: TCGCCCGCCAGCCGCGCTCGTCGGGATCCTGGTGCAGCCGCGGCCGGATGAGGAGGACGAGTCGCGCCGCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CCA 72 bp | CGGCCGCGGCTGCACCAGGATCCCGACGAGCGCGGCTaGCGGGCGACGCTCCTGGACCCGTACCTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPRLHQDPDERG*RATLLDPYLLQ Trigger: CTGCAGCAGGTACGGGTCCAGGAGCGTCGCCCGCCAGCCGCGCTCGTCGGGATCCTGGTGCAGCCGCGGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CCA 72 bp | CAGCGCGCTGGACGTCCAGGACACCCTGGGGGCGGCTaGGACAGAACACTGCTGTGTGCACCTCGACCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QRAGRPGHPGGG*DRTLLCAPRPP Trigger: CGGGGGTCGAGGTGCACACAGCAGTGTTCTGTCCCAGCCGCCCCCAGGGTGTCCTGGACGTCCAGCGCGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CAA 72 bp | AGCGCCGATGCGTGGCACAGCACCAGGAGCAGCTGCTaGCCGGGCTCTGAGCTTAGCTCGGCGATCTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SADAWHSTRSSC*PGSELSSAISA Trigger: CGCTGAGATCGCCGAGCTAAGCTCAGAGCCCGGCAAGCAGCTGCTCCTGGTGCTGTGCCACGCATCGGCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CCA 72 bp | GGCTCAGGGTTAACTTGGTGTGGTGTGGTGGACTCCTaGCAAGGCTGTGGCTTAGATGGTGGCGAGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSGLTWCGVVDS*QGCGLDGGEAG Trigger: GCCCGCCTCGCCACCATCTAAGCCACAGCCTTGCCAGGAGTCCACCACACCACACCAAGTTAACCCTGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000125083.2 ENSMUST00000130504.8 ENSMUST00000131151.3 ENSMUST00000135440.2 ENSMUST00000152501.8 ENSMUST00000153247.3 ENSMUST00000159876.8 |
||
| CDS CCA 72 bp | CGCTTGAGTCGCCGTCTGGCACTGCGGCAACTACTTTaGCAGTCTGTTGCTTGGGTGTTGGGCAGGGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLSRRLALRQLL*QSVAWVLGRVV Trigger: CACGACCCTGCCCAACACCCAAGCAACAGACTGCCAAAGTAGTTGCCGCAGTGCCAGACGGCGACTCAAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CAA 72 bp | GCGCTTGAGTCGCCGTCTGGCACTGCGGCAACTACTTaGGCAGTCTGTTGCTTGGGTGTTGGGCAGGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: ALESPSGTAATT*AVCCLGVGQGR Trigger: ACGACCCTGCCCAACACCCAAGCAACAGACTGCCAAAGTAGTTGCCGCAGTGCCAGACGGCGACTCAAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
||
| CDS CAA 72 bp | CAAGGCCCCCAGAGCCACAGCAACAGTTCCGAGAGCTaGAAGCACGAGAGTTACGGGGAGCGCAGTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: QGPQSHSNSSES*KHESYGERSTS Trigger: GGAAGTACTGCGCTCCCCGTAACTCTCGTGCTTCAAGCTCTCGGAACTGTTGCTGTGGCTCTGGGGGCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000130504.8 ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000153247.3 ENSMUST00000159876.8 |
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| CDS GCA 72 bp | CCGTCTGGCACTGCGGCAACTACTTTGGCAGTCTGTTaGTTGGGTGTTGGGCAGGGTCGTGTAGCTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: PSGTAATTLAVC*LGVGQGRVAFI Trigger: GATGAAAGCTACACGACCCTGCCCAACACCCAAGCAACAGACTGCCAAAGTAGTTGCCGCAGTGCCAGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
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| CDS CAA 72 bp | GCCGTCTGGCACTGCGGCAACTACTTTGGCAGTCTGTaGCTTGGGTGTTGGGCAGGGTCGTGTAGCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: AVWHCGNYFGSL*LGCWAGSCSFH Trigger: ATGAAAGCTACACGACCCTGCCCAACACCCAAGCAACAGACTGCCAAAGTAGTTGCCGCAGTGCCAGACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
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| CDS GCA 72 bp | GGAGCAGGAGCGTGGGGCCACATAGGTCAGAGGCACTaGTGCTTTCCTGCTTGGAAGAATTGGTTTAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GAGAWGHIGQRH*CFPAWKNWFRF Trigger: GAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACCTATGTGGCCCCACGCTCCTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000135440.2 ENSMUST00000159876.8 |
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| CDS CAA 72 bp | TGGTGTATGCTGTTGCGGTTTAGGCTCAGGGTTAACTaGGTGTGGTGTGGTGGACTCCTGGCAAGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: WCMLLRFRLRVN*VWCGGLLARLW Trigger: CCACAGCCTTGCCAGGAGTCCACCACACCACACCAAGTTAACCCTGAGCCTAAACCGCAACAGCATACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000125083.2 ENSMUST00000130504.8 ENSMUST00000131151.3 ENSMUST00000135440.2 ENSMUST00000152501.8 ENSMUST00000153247.3 ENSMUST00000159876.8 |
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| CDS CAA 72 bp | TCTGGCACTGCGGCAACTACTTTGGCAGTCTGTTGCTaGGGTGTTGGGCAGGGTCGTGTAGCTTTCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: SGTAATTLAVCC*GVGQGRVAFIL Trigger: CAGGATGAAAGCTACACGACCCTGCCCAACACCCAAGCAACAGACTGCCAAAGTAGTTGCCGCAGTGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149469.3 |
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| CDS GCA 72 bp | GCAGGAGCGTGGGGCCACATAGGTCAGAGGCACTGCTaGTTTCCTGCTTGGAAGAATTGGTTTAGGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: AGAWGHIGQRHC*FPAWKNWFRFH Trigger: ATGGAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGCAGTGCCTCTGACCTATGTGGCCCCACGCTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052854.13 ENSMUST00000135440.2 ENSMUST00000159876.8 |
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| CDS TCA 72 bp | GAGCGCAGTACTTCCTTGACGGTTTTCTGTAGAAGGTaGGAAGGTTTGGGACTCCTCTCCCTGGCATGGATG | + |
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Preference number: 6 (lower is better) Translates to: ERSTSLTVFCRR*EGLGLLSLAWM Trigger: CATCCATGCCAGGGAGAGGAGTCCCAAACCTTCTCACCTTCTACAGAAAACCGTCAAGGAAGTACTGCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000052854.13 ENSMUST00000113344.8 ENSMUST00000130504.8 ENSMUST00000131151.3 ENSMUST00000149469.3 ENSMUST00000159876.8 |
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| CDS CAA 72 bp | TTGAAGCACGAGAGTTACGGGGAGCGCAGTACTTCCTaGACGGTTTTCTGCTTTCCTGCTTGGAAGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: LKHESYGERSTS*TVFCFPAWKNW Trigger: CCAATTCTTCCAAGCAGGAAAGCAGAAAACCGTCAAGGAAGTACTGCGCTCCCCGTAACTCTCGTGCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153247.3 |
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| CDS GCA 72 bp | AGTTACGGGGAGCGCAGTACTTCCTTGACGGTTTTCTaGTTTCCTGCTTGGAAGAATTGGTTTAGGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SYGERSTSLTVF*FPAWKNWFRFH Trigger: ATGGAACCTAAACCAATTCTTCCAAGCAGGAAAGCAGAAAACCGTCAAGGAAGTACTGCGCTCCCCGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153247.3 |
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