Pregenerated sensors for SPATA2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033594Ensembl transcript IDs: ENSMUST00000098327.2, ENSMUST00000166768.3, ENSMUST00000212818.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCGTTCCACGAAGGCTCTACCCTCTTTCAACTGCAGGTCCTGAATaGCCCCTGGGGAGTAGGAGGGCCAGGGTAGCCAGTGGCCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: SVPRRLYPLSTAGPE*PLGSRRARVASGLG Trigger: ACCTAGGCCACTGGCTACCCTGGCCCTCCTACTCCCCAGGGGCCATTCAGGACCTGCAGTTGAAAGAGGGTAGAGCCTTCGTGGAACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 90 bp | GAGAATCACTCCTGCTGGGTGGGAGTGACAGCTCCTCCCACTGCCTaGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: ENHSCWVGVTAPPTA*ECASLTAEVNRGPH Trigger: GTGAGGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGAGCTGTCACTCCCACCCAGCAGGAGTGATTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR TCA 90 bp | AGCACATCTGGGCATGAGGCTAGGGATGAGAGGGAAGGATCTTTTTaGTTGAGCTCGGCCTGCTGCACCAGGGCTGAGACTGCACCAGGT | + |
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Preference number: 1 (lower is better) Translates to: STSGHEARDEREGSF*LSSACCTRAETAPG Trigger: ACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGGCCGAGCTCAATCAAAAAGATCCTTCCCTCTCATCCCTAGCCTCATGCCCAGATGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 90 bp | CCCAAATCTAACTCGGGGATCTTAACTGTGTCACCTGCAAGCCCCTaGGTGAGGGTTTCTCAGCACGTGGAAAGAGGGACATGTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PKSNSGILTVSPASP*VRVSQHVERGTCPQ Trigger: CTGAGGACATGTCCCTCTTTCCACGTGCTGAGAAACCCTCACCCAGGGGCTTGCAGGTGACACAGTTAAGATCCCCGAGTTAGATTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 90 bp | ATAGGGTGGGGTCTTTCTGAGTTTGGGTACTGTAACAGGATAACCTaGACTTCTCTACCCAGCACATCTGGGCATGAGGCTAGGGATGAG | + |
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Preference number: 1 (lower is better) Translates to: IGWGLSEFGYCNRIT*TSLPSTSGHEARDE Trigger: CTCATCCCTAGCCTCATGCCCAGATGTGCTGGGTAGAGAAGTCCAGGTTATCCTGTTACAGTACCCAAACTCAGAAAGACCCCACCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCGTCCTGAATGGCCCCTaGGGAGTAGGAGGGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSHCLGVCLTNSRGEPGSVLNGP*GVGGPG Trigger: CCCTGGCCCTCCTACTCCCCAGGGGCCATTCAGGAC...GGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGGACCCGTGTCCTCTGAGGGCCTGCATGAGGAGCAGGGACAGGCTTGGCTGGGTGATCTCTGTGCCTaGGCCTTCGAGTGGTTGATG | + |
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Preference number: 2 (lower is better) Translates to: GGPVSSEGLHEEQGQAWLGDLCA*AFEWLM Trigger: CATCAACCACTCGAAGGCCCAGGCACAGAGATCACC...CAGCCAAGCCTGTCCCTGCTCCTCATGCAGGCCCTCAGAGGACACGGGTCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGCCCAAATCTAACTCGGGGATCTTAACTGTGTCACCTGCAAGCCCCTGGGTCCTGAATGGCCCCTaGGGAGTAGGAGGGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TWPKSNSGILTVSPASPWVLNGP*GVGGPG Trigger: CCCTGGCCCTCCTACTCCCCAGGGGCCATTCAGGAC...CCAGGGGCTTGCAGGTGACACAGTTAAGATCCCCGAGTTAGATTTGGGCCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGCAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAGTGGTTGATGAAAATCCCTGCTGGGTGGGAGTaGCAGCTCCTCCCACTGCCT | + |
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Preference number: 2 (lower is better) Translates to: VWQSGDLCAWAFEWLMKIPAGWE*QLLPLP Trigger: AGGCAGTGGGAGGAGCTGTCACTCCCACCCAGCAGG...GATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTGCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGGACCCGTGTCCTCTGAGGGCCTGCATGAGGAGCAGGGACAGGCTTGGCTGTTTTTGGCAATAGCCTaGGAAGTGGCTTGTACATGC | + |
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Preference number: 2 (lower is better) Translates to: GGPVSSEGLHEEQGQAWLFLAIA*EVACTC Trigger: GCATGTACAAGCCACTTCTCAGGCTATTGCCAAAAA...CAGCCAAGCCTGTCCCTGCTCCTCATGCAGGCCCTCAGAGGACACGGGTCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAATGAGCTACGTGGAGTGGCTGCAAGCCCCTGGGTaGGGGTTTCTCAGCACGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GYNFFLVSCMPRMSYVEWLQAPG*GFLSTW Trigger: CCACGTGCTGAGAAACCCTCACCCAGGGGCTTGCAG...CCACTCCACGTAGCTCATTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTGATCTTAACTGTGTCACCTaGAAGCCCCTGGGTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GTGLAEEVPLEEVWQSGDLNCVT*KPLGEG Trigger: ACCCTCACCCAGGGGCTTGCAGGTGACACAGTTAAG...ATCACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTGATCACTGCCTGGGAGTGTaGCTCACTAACAGCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: GTGLAEEVPLEEVWQSGDHCLGV*LTNSRG Trigger: ACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTG...ATCACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR GCA 90 bp | AATGAGGGGTCCTGGTCTACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGGACAGCTCCTCCCACTaGCTGGGAGTGTGCCTCACT | + |
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Preference number: 2 (lower is better) Translates to: NEGSWSTRMGDEGITSSWDSSSH*LGVCLT Trigger: AGTGAGGCACACTCCCAGGCAGTGGGAGGAGCTGTC...CCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGTAGACCAGGACCCCTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTGATCAGCTAAGTAAGCTCTaGTCTTTCAGACCCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: GTGLAEEVPLEEVWQSGDQLSKL*SFRPSH Trigger: GTGGGAGGGTCTGAAAGAGCAGAGCTTACTTAGCTG...ATCACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAACTTAACTGTGTCACCTaGAAGCCCCTGGGTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TRMGDEGITSSWLAACPELNCVT*KPLGEG Trigger: ACCCTCACCCAGGGGCTTGCAGGTGACACAGTTAAG...TTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAATGAGCTACGTGGAGTGGTGGCTGGTAGGTAGCTaGTGGCAGAGAATCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: GYNFFLVSCMPRMSYVEWWLVGS*WQRITP Trigger: AGGAGTGATTCTCTGCCATCAGCTACCTACCAGCCA...CCACTCCACGTAGCTCATTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAGTGGTTGATGAAAATCCAGCCCAGGCAGTTCATAGGGTaGGGTCTTTCTGAGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QSGDLCAWAFEWLMKIQPRQFIG*GLSEFG Trigger: CCCAAACTCAGAAAGACCCCACCCTATGAACTGCCT...GGGCTGGATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGAAAGAGGGACATGTCCTCAGTCATACTCCACAGGGATCAGGTAGGGAGAGGCAGTTCATAGGGTaGGGTCTTTCTGAGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: TWKEGHVLSHTPQGSGRERQFIG*GLSEFG Trigger: CCCAAACTCAGAAAGACCCCACCCTATGAACTGCCT...CTCCCTACCTGATCCCTGTGGAGTATGACTGAGGACATGTCCCTCTTTCCACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAATGAGCTACGTGGAGTGGGGGTTTCTCAGCACGTaGAAAGAGGGACATGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GYNFFLVSCMPRMSYVEWGFLST*KEGHVL Trigger: GAGGACATGTCCCTCTTTCCACGTGCTGAGAAACCC...CCACTCCACGTAGCTCATTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGCAATCCTTTAATGTACTGTGGGGTTTCGATCCATGCAACATGGACAGTGCAGAGAATCACTCCTaGTGGGTGGGAGTGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: VWQSFNVLWGFDPCNMDSAENHS*WVGVTA Trigger: AGCTGTCACTCCCACCCAGCAGGAGTGATTCTCTGC...ACTGTCCATGTTGCATGGATCGAAACCCCACAGTACATTAAAGGATTGCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGCAATCCTTTAATGTACTGTGGGGTTTCGATCCATGCAACATGGACAGTTGGCTGGTAGGTAGCTaGTGGCAGAGAATCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: VWQSFNVLWGFDPCNMDSWLVGS*WQRITP Trigger: AGGAGTGATTCTCTGCCATCAGCTACCTACCAGCCA...ACTGTCCATGTTGCATGGATCGAAACCCCACAGTACATTAAAGGATTGCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | TCCTGCTGGGTGGGAGTGACAGCTCCTCCCACTGCCTaGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGG | + |
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Preference number: 3 (lower is better) Translates to: SCWVGVTAPPTA*ECASLTAEVNR Trigger: CCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGAGCTGTCACTCCCACCCAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | ACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTaGCAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAG | + |
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Preference number: 3 (lower is better) Translates to: TGLAEEVPLEEV*QSGDLCAWAFE Trigger: CTCGAAGGCCCAGGCACAGAGATCACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR TCA 72 bp | GGGCATGAGGCTAGGGATGAGAGGGAAGGATCTTTTTaGTTGAGCTCGGCCTGCTGCACCAGGGCTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: GHEARDEREGSF*LSSACCTRAET Trigger: AGTCTCAGCCCTGGTGCAGCAGGCCGAGCTCAATCAAAAAGATCCTTCCCTCTCATCCCTAGCCTCATGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR TCA 72 bp | ATGAGGCTAGGGATGAGAGGGAAGGATCTTTTTGATTaGGCTCGGCCTGCTGCACCAGGGCTGAGACTGCAC | + |
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Preference number: 3 (lower is better) Translates to: MRLGMRGKDLFD*ARPAAPGLRLH Trigger: GTGCAGTCTCAGCCCTGGTGCAGCAGGCCGAGCTCAATCAAAAAGATCCTTCCCTCTCATCCCTAGCCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | AACTCGGGGATCTTAACTGTGTCACCTGCAAGCCCCTaGGTGAGGGTTTCTCAGCACGTGGAAAGAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: NSGILTVSPASP*VRVSQHVERGT Trigger: TGTCCCTCTTTCCACGTGCTGAGAAACCCTCACCCAGGGGCTTGCAGGTGACACAGTTAAGATCCCCGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR TCA 72 bp | TGGAGTGGGGCGGTGAGCTGCTTTTTGGCAATAGCCTaGGAAGTGGCTTGTACATGCTCCCTTCCTTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WSGAVSCFLAIA*EVACTCSLPFW Trigger: CCAGAAAGGAAGGGAGCATGTACAAGCCACTTCTCAGGCTATTGCCAAAAAGCAGCTCACCGCCCCACTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR TCA 72 bp | GGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAATaGGCTACGTGGAGTGGGGCGGTGAGCTGCTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: GITSSWLAACPE*ATWSGAVSCFL Trigger: CAAAAAGCAGCTCACCGCCCCACTCCACGTAGCTCATTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR GCA 72 bp | TGGCAATCCTTTAATGTACTGTGGGGTTTCGATCCATaGAACATGGACAGTGTCCTCCGAGGGCCCTGCATG | + |
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Preference number: 3 (lower is better) Translates to: WQSFNVLWGFDP*NMDSVLRGPCM Trigger: CATGCAGGGCCCTCGGAGGACACTGTCCATGTTGCATGGATCGAAACCCCACAGTACATTAAAGGATTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | GAGGATTGGCAGTTTAGGGACCCTAATGAGGGGTCCTaGTCTACCCGCATGGGAGATGAGGGTATAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: EDWQFRDPNEGS*STRMGDEGITS Trigger: AGAAGTTATACCCTCATCTCCCATGCGGGTAGACCAGGACCCCTCATTAGGGTCCCTAAACTGCCAATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | CTAGAGGAAGTGTGGCAAAGTGGTGATCTCTGTGCCTaGGCCTTCGAGTGGTTGATGAAAATCCAGCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LEEVWQSGDLCA*AFEWLMKIQPF Trigger: GAAGGGCTGGATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTGCCACACTTCCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CAA 90 bp | GGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAATGAGCTACGTGGAGTGGAGCCTGAGAAGTGGCTaGTACATGCTCCCTTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GYNFFLVSCMPRMSYVEWSLRSG*YMLPSF Trigger: AAAGGAAGGGAGCATGTACAAGCCACTTCTCAGGCT...CCACTCCACGTAGCTCATTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | GAAAATCCAGCCCTTCACTATCCCTATCCTGAGGATTaGCAGTTTAGGGACCCTAATGAGGGGTCCTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: ENPALHYPYPED*QFRDPNEGSWS Trigger: AGACCAGGACCCCTCATTAGGGTCCCTAAACTGCCAATCCTCAGGATAGGGATAGTGAAGGGCTGGATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | TGGCAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAGTaGTTGATGAAAATCCAGCCCTTCACTATCCCTATC | + |
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Preference number: 3 (lower is better) Translates to: WQSGDLCAWAFE*LMKIQPFTIPI Trigger: GATAGGGATAGTGAAGGGCTGGATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | GGTCTTTCTGAGTTTGGGTACTGTAACAGGATAACCTaGACTTCTCTACCCAGCACATCTGGGCATGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GLSEFGYCNRIT*TSLPSTSGHEA Trigger: AGCCTCATGCCCAGATGTGCTGGGTAGAGAAGTCCAGGTTATCCTGTTACAGTACCCAAACTCAGAAAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR CCA 72 bp | AGGGATCAGGTAGGGAGCTTCAGGCAGTTCATAGGGTaGGGTCTTTCTGAGTTTGGGTACTGTAACAGGATA | + |
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Preference number: 3 (lower is better) Translates to: RDQVGSFRQFIG*GLSEFGYCNRI Trigger: TATCCTGTTACAGTACCCAAACTCAGAAAGACCCCACCCTATGAACTGCCTGAAGCTCCCTACCTGATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| 3UTR-3UTR CAA 90 bp | GTTTGGCAATCCTTTAATGTACTGTGGGGTTTCGATCCATGCAACATGGACAGTGAGGGAAGGATCTTTTaGATTGAGCTCGGCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VWQSFNVLWGFDPCNMDSEGRIF*IELGLL Trigger: CAGCAGGCCGAGCTCAATCAAAAAGATCCTTCCCTC...ACTGTCCATGTTGCATGGATCGAAACCCCACAGTACATTAAAGGATTGCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR CCA 90 bp | TCCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCGCCACCTGCACCAGCTaGCAGGCAGGGGGTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSHCLGVCLTNSRGEPGSATCTS*QAGGGV Trigger: CACCCCACCCCCTGCCTGCCAGCTGGTGCAGGTGGC...GGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR GCA 90 bp | GGTGGACCCGTGTCCTCTGAGGGCCTGCATGAGGAGCAGGGACAGGCTTGGCTGCATAAGTGGCAGGTGTaGCCCGAGGGGGCAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GGPVSSEGLHEEQGQAWLHKWQV*PEGAEV Trigger: CACCTCTGCCCCCTCGGGGCACACCTGCCACTTATG...CAGCCAAGCCTGTCCCTGCTCCTCATGCAGGCCCTCAGAGGACACGGGTCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR GCA 90 bp | GGTGGACCCGTGTCCTCTGAGGGCCTGCATGAGGAGCAGGGACAGGCTTGGCTGGGCCGAGGATGCAGCTaGTTCTGCCTGCCTGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GGPVSSEGLHEEQGQAWLGRGCS*FCLPVS Trigger: CGACACAGGCAGGCAGAAGCAGCTGCATCCTCGGCC...CAGCCAAGCCTGTCCCTGCTCCTCATGCAGGCCCTCAGAGGACACGGGTCCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR GCA 90 bp | CCTGCTGCACCAGGGCTGAGACTGCACCAGGTGAGAGCGTTCCACGAAGGCTCTCAACCTAGGGCCACCTaGACCAGCTGGCAGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PAAPGLRLHQVRAFHEGSQPRAT*TSWQAG Trigger: CCCTGCCTGCCAGCTGGTGCAGGTGGCCCTAGGTTG...AGAGCCTTCGTGGAACGCTCTCACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR CCA 90 bp | GGTGGACCCGTGTCCTCTGAGGGCCTGCATGAGGAGCAGGGACAGGCTTGGCTGGATAGGGCAGTGCAGTaGGTAGCATGGAGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GGPVSSEGLHEEQGQAWLDRAVQ*VAWSWR Trigger: CCGCCAGCTCCATGCTACCCACTGCACTGCCCTATC...CAGCCAAGCCTGTCCCTGCTCCTCATGCAGGCCCTCAGAGGACACGGGTCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR TCA 90 bp | CCTGCTGCACCAGGGCTGAGACTGCACCAGGTGAGAGCGTTCCACGAAGGCTCTGGCGGTTCCCAGGGCTaGCCTCCAGAACCCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: PAAPGLRLHQVRAFHEGSGGSQG*PPEPHS Trigger: ACTATGGGGTTCTGGAGGTCAGCCCTGGGAACCGCC...AGAGCCTTCGTGGAACGCTCTCACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR GCA 90 bp | CCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCTTCTTGGGCCAGGCGTTaGTGCAGCCAGGCCACACAG | + |
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Preference number: 4 (lower is better) Translates to: PPTAWECASLTAEVNRGPSWARR*CSQATQ Trigger: CTGTGTGGCCTGGCTGCAGCAACGCCTGGCCCAAGA...AGGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR GCA 90 bp | GGTGGACCCGTGTCCTCTGAGGGCCTGCATGAGGAGCAGGGACAGGCTTGGCTGAGAGGGTGGGTAGGTTaGCAGGGCTCAAGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGPVSSEGLHEEQGQAWLRGWVG*QGSSSC Trigger: ACAGCTGCTTGAGCCCTGGCAACCTACCCACCCTCT...CAGCCAAGCCTGTCCCTGCTCCTCATGCAGGCCCTCAGAGGACACGGGTCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | GGTGGACCCGTGTCCTCTGAGGGCCTGCATGAGGAGCAGGGACAGGCTTGGCTGACTCTGCTCCCAGAGTaGTGGCCTGTAAGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGPVSSEGLHEEQGQAWLTLLPE*WPVSQL Trigger: GAGCTGGCTTACAGGCCACCACTCTGGGAGCAGAGT...CAGCCAAGCCTGTCCCTGCTCCTCATGCAGGCCCTCAGAGGACACGGGTCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGCACCAGGGCTGAGACTGCACCAGGTGAGAGCGTTCCACGAAGGCTCTCCCACAGGCCATCAGTaGACAGGGCTAGCGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: PAAPGLRLHQVRAFHEGSPTGHQ*TGLAHR Trigger: ACGATGCGCTAGCCCTGTTCACTGATGGCCTGTGGG...AGAGCCTTCGTGGAACGCTCTCACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGCACCAGGGCTGAGACTGCACCAGGTGAGAGCGTTCCACGAAGGCTCTTCTTCCACCAGAATCTaGCAGAGCACCGCGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAAPGLRLHQVRAFHEGSSSTRI*QSTARS Trigger: GCTGCGCGCGGTGCTCTGGCAGATTCTGGTGGAAGA...AGAGCCTTCGTGGAACGCTCTCACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGCACCAGGGCTGAGACTGCACCAGGTGAGAGCGTTCCACGAAGGCTCTCCCATAGGCCGAGGATaGAGCTGCTTCTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAAPGLRLHQVRAFHEGSPIGRG*SCFCLP Trigger: AGGCAGGCAGAAGCAGCTGCATCCTCGGCCTATGGG...AGAGCCTTCGTGGAACGCTCTCACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCGATAGGGCAGTGCAGTaGGTAGCATGGAGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHCLGVCLTNSRGEPGSDRAVQ*VAWSWR Trigger: CCGCCAGCTCCATGCTACCCACTGCACTGCCCTATC...GGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | GTGACAGCTCCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACTCTTGGGCCAGGCGTTaGTGCAGCCAGGCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VTAPPTAWECASLTAEVNSWARR*CSQATQ Trigger: CTGTGTGGCCTGGCTGCAGCAACGCCTGGCCCAAGA...GTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGAGCTGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTCATAAGTGGCAGGTGTaGCCCGAGGGGGCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGTGLAEEVPLEEVWQSGHKWQV*PEGAEV Trigger: CACCTCTGCCCCCTCGGGGCACACCTGCCACTTATG...ACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTGGATGCAGCTGCTTCTaGCTGCCTGTGTCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTGLAEEVPLEEVWQSGGCSCF*LPVSGA Trigger: AGCCCCCGACACAGGCAGGCAGAAGCAGCTGCATCC...ACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR TCA 90 bp | GGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTGATGGCGGTTCCCAGGGCTaGCCTCCAGAACCCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGLAEEVPLEEVWQSGDGGSQG*PPEPHS Trigger: ACTATGGGGTTCTGGAGGTCAGCCCTGGGAACCGCC...ATCACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | TTCCACGAAGGCTCTACCCTCTTTCAACTGCAGGTCCTGAATGGCCCCTGGGGAGGCAGCAGGTACAGGTaGACAGCGGCCAGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHEGSTLFQLQVLNGPWGGSRYR*TAASSR Trigger: CCTAGAGCTGGCCGCTGTGCACCTGTACCTGCTGCC...TCCCCAGGGGCCATTCAGGACCTGCAGTTGAAAGAGGGTAGAGCCTTCGTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCTGAAAGCAGAGGGTTCTaGCTCCAGCTCCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPTAWECASLTAEVNRGPESRGF*LQLLFQ Trigger: CTGGAAGAGGAGCTGGAGCCAGAACCCTCTGCTTTC...AGGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGCACCAGGGCTGAGACTGCACCAGGTGAGAGCGTTCCACGAAGGCTCTGAAAGCAGAGGGTTCTaGCTCCAGCTCCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAAPGLRLHQVRAFHEGSESRGF*LQLLFQ Trigger: CTGGAAGAGGAGCTGGAGCCAGAACCCTCTGCTTTC...AGAGCCTTCGTGGAACGCTCTCACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | ACGTGGAAAGAGGGACATGTCCTCAGTCATACTCCACAGGGATCAGGTAGGGAGGCAGCTGCTTCTGCCTaGCTGTGTCGGGGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWKEGHVLSHTPQGSGREAAASA*LCRGLA Trigger: AGCCAGCCCCCGACACAGGCAGGCAGAAGCAGCTGC...CTCCCTACCTGATCCCTGTGGAGTATGACTGAGGACATGTCCCTCTTTCCACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | GTGACAGCTCCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACGCTCAAGCAGCTGTGTaGCTGGTAGCTCAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTAPPTAWECASLTAEVNAQAAV*LVAQRL Trigger: GAGCCTCTGAGCTACCAGGCACACAGCTGCTTGAGC...GTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGAGCTGTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCTCACAGCTAAGTAAGCTCGGTGGCTCCTCATCTTaGGCCAGGCGTTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCLTNSRGEPGSSQLSKLGGSSS*ARRCCS Trigger: GCTGCAGCAACGCCTGGCCCAAGATGAGGAGCCACC...GAGCTTACTTAGCTGTGAGGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | GTGACAGCTCCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACACTCTGCTCCCAGAGTaGTGGCCTGTAAGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTAPPTAWECASLTAEVNTLLPE*WPVSQL Trigger: GAGCTGGCTTACAGGCCACCACTCTGGGAGCAGAGT...GTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGAGCTGTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACCGGGGTCCTCATATGGTGGGCTGCTaGCCCGATGCATATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPTAWECASLTAEVNRGPHMVGC*PDAYHQ Trigger: CTGATGATATGCATCGGGCCAGCAGCCCACCATATG...AGGACCCCGGTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | CACCAGGTGAGAGCGTTCCACGAAGGCTCTACCCTCTTTCAACTGCAGGTCCTGTTCCAGAGCCCCATATaGTGGGCTGCTGGCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HQVRAFHEGSTLFQLQVLFQSPI*WAAGPM Trigger: CATCGGGCCAGCAGCCCACCATATGGGGCTCTGGAA...CAGGACCTGCAGTTGAAAGAGGGTAGAGCCTTCGTGGAACGCTCTCACCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | CACCAGGTGAGAGCGTTCCACGAAGGCTCTACCCTCTTTCAACTGCAGGTCCTGGCTCAAGCAGCTGTGTaGCTGGTAGCTCAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQVRAFHEGSTLFQLQVLAQAAV*LVAQRL Trigger: GAGCCTCTGAGCTACCAGGCACACAGCTGCTTGAGC...CAGGACCTGCAGTTGAAAGAGGGTAGAGCCTTCGTGGAACGCTCTCACCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | ACGTGGCCCAAATCTAACTCGGGGATCTTAACTGTGTCACCTGCAAGCCCCTGGAGGCGAGTCCAGCCCTaGGGAAGGCTCACCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: TWPKSNSGILTVSPASPWRRVQP*GRLTIQ Trigger: CTGTATGGTGAGCCTTCCCCAGGGCTGGACTCGCCT...CCAGGGGCTTGCAGGTGACACAGTTAAGATCCCCGAGTTAGATTTGGGCCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | ACGTGGCCCAAATCTAACTCGGGGATCTTAACTGTGTCACCTGCAAGCCCCTGGCAGAGCCCCATATGGTaGGCTGCTGGCCCGATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TWPKSNSGILTVSPASPWQSPIW*AAGPMH Trigger: ATGCATCGGGCCAGCAGCCCACCATATGGGGCTCTG...CCAGGGGCTTGCAGGTGACACAGTTAAGATCCCCGAGTTAGATTTGGGCCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAGTGGTTGATGAAAATCCAGCCCTCTTCCACCAGAATCTaGCAGAGCACCGCGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSGDLCAWAFEWLMKIQPSSTRI*QSTARS Trigger: GCTGCGCGCGGTGCTCTGGCAGATTCTGGTGGAAGA...GGGCTGGATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | ACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAAGGATGCAGCTGCTTCTaGCTGCCTGTGTCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRMGDEGITSSWLAACPEGCSCF*LPVSGA Trigger: AGCCCCCGACACAGGCAGGCAGAAGCAGCTGCATCC...TTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | GTGTGGCAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAGTGGTTGATGAAAATCGGCCGAGGATGCAGCTaGTTCTGCCTGCCTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VWQSGDLCAWAFEWLMKIGRGCS*FCLPVS Trigger: CGACACAGGCAGGCAGAAGCAGCTGCATCCTCGGCC...GATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTGCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGGTCCTGGTCTACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGCCCATAGGCCGAGGATaGAGCTGCTTCTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NEGSWSTRMGDEGITSSWPIGRG*SCFCLP Trigger: AGGCAGGCAGAAGCAGCTGCATCCTCGGCCTATGGG...CCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGTAGACCAGGACCCCTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGGCAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAGTGGTTGATGAAAATCGGTGGCTCCTCATCTTaGGCCAGGCGTTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWQSGDLCAWAFEWLMKIGGSSS*ARRCCS Trigger: GCTGCAGCAACGCCTGGCCCAAGATGAGGAGCCACC...GATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTGCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | ACGTGGAAAGAGGGACATGTCCTCAGTCATACTCCACAGGGATCAGGTAGGGAGAGGCGAGTCCAGCCCTaGGGAAGGCTCACCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: TWKEGHVLSHTPQGSGRERRVQP*GRLTIQ Trigger: CTGTATGGTGAGCCTTCCCCAGGGCTGGACTCGCCT...CTCCCTACCTGATCCCTGTGGAGTATGACTGAGGACATGTCCCTCTTTCCACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTCAGAACCCCATAGTTTaGCACTCTGCTCCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGTGLAEEVPLEEVWQSGQNPIV*HSAPRV Trigger: CACTCTGGGAGCAGAGTGCCAAACTATGGGGTTCTG...ACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | AATGAGGGGTCCTGGTCTACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGTTCCAGAGCCCCATATaGTGGGCTGCTGGCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NEGSWSTRMGDEGITSSWFQSPI*WAAGPM Trigger: CATCGGGCCAGCAGCCCACCATATGGGGCTCTGGAA...CCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGTAGACCAGGACCCCTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | GTTTGGCAATCCTTTAATGTACTGTGGGGTTTCGATCCATGCAACATGGACAGTGCCACCTGCACCAGCTaGCAGGCAGGGGGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VWQSFNVLWGFDPCNMDSATCTS*QAGGGV Trigger: CACCCCACCCCCTGCCTGCCAGCTGGTGCAGGTGGC...ACTGTCCATGTTGCATGGATCGAAACCCCACAGTACATTAAAGGATTGCCAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGACAGGCTTGGCTGAGGAGGTGCCACTAGAGGAAGTGTGGCAAAGTGGTGCTCACCATACAGACTaGCCTCTGAGCTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGTGLAEEVPLEEVWQSGAHHTD*PLSSHL Trigger: AAGATGAGAGCTCAGAGGCCAGTCTGTATGGTGAGC...ACCACTTTGCCACACTTCCTCTAGTGGCACCTCCTCAGCCAAGCCTGTCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | AATGAGGGGTCCTGGTCTACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGTGTCACAGCAGAGGGTaGGTAGGTTGCCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NEGSWSTRMGDEGITSSWCHSRG*VGCQGS Trigger: TGAGCCCTGGCAACCTACCCACCCTCTGCTGTGACA...CCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGTAGACCAGGACCCCTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | ACGTGGCCCAAATCTAACTCGGGGATCTTAACTGTGTCACCTGCAAGCCCCTGGCATATGGTGGGCTGCTaGCCCGATGCATATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TWPKSNSGILTVSPASPWHMVGC*PDAYHQ Trigger: CTGATGATATGCATCGGGCCAGCAGCCCACCATATG...CCAGGGGCTTGCAGGTGACACAGTTAAGATCCCCGAGTTAGATTTGGGCCACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGTGGTGATCTCTGTGCCTGGGCCTTCGAGTGGTTGATGAAAATCCAGCCCATACAGACTGGCCTCTaGGCTCTCATCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSGDLCAWAFEWLMKIQPIQTGL*ALIFLQ Trigger: CTGCAGGAAGATGAGAGCTCAGAGGCCAGTCTGTAT...GGGCTGGATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCAATCCTTTAATGTACTGTGGGGTTTCGATCCATGCAACATGGACAGTGCAGCTGCTTCTGCCTaGCTGTGTCGGGGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VWQSFNVLWGFDPCNMDSAAASA*LCRGLA Trigger: AGCCAGCCCCCGACACAGGCAGGCAGAAGCAGCTGC...ACTGTCCATGTTGCATGGATCGAAACCCCACAGTACATTAAAGGATTGCCAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR CCA 90 bp | AATGAGGGGTCCTGGTCTACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGCAGAACCCCATAGTTTaGCACTCTGCTCCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NEGSWSTRMGDEGITSSWQNPIV*HSAPRV Trigger: CACTCTGGGAGCAGAGTGCCAAACTATGGGGTTCTG...CCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGTAGACCAGGACCCCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR TCA 90 bp | ACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAAATACAGACTGGCCTCTaGGCTCTCATCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRMGDEGITSSWLAACPEIQTGL*ALIFLQ Trigger: CTGCAGGAAGATGAGAGCTCAGAGGCCAGTCTGTAT...TTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCAATCCTTTAATGTACTGTGGGGTTTCGATCCATGCAACATGGACAGTGGCAGCAGGTACAGGTaGACAGCGGCCAGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWQSFNVLWGFDPCNMDSGSRYR*TAASSR Trigger: CCTAGAGCTGGCCGCTGTGCACCTGTACCTGCTGCC...ACTGTCCATGTTGCATGGATCGAAACCCCACAGTACATTAAAGGATTGCCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS TCA 90 bp | CTTGGAGGGCCGGTGCCAGGTCAGCCCGCCCCCACAGGCCATCAGTaGACAGGGCTAGCGCATCGTCCTGTAGCGCCCCGTGCAGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGGPVPGQPAPTGHQ*TGLAHRPVAPRAGQ Trigger: TTGACCTGCACGGGGCGCTACAGGACGATGCGCTAGCCCTGTTCACTGATGGCCTGTGGGGGCGGGCTGACCTGGCACCGGCCCTCCAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 ENSMUST00000212818.2 |
||
| CDS GCA 90 bp | TCGTCCTGTAGCGCCCCGTGCAGGTCAAAGTCTTCCACCAGAATCTaGCAGAGCACCGCGCGCAGCGAGGGGTCGCCGCAAACGCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSAPCRSKSSTRI*QSTARSEGSPQTPA Trigger: CGCGGGCGTTTGCGGCGACCCCTCGCTGCGCGCGGTGCTCTGGCAGATTCTGGTGGAAGACTTTGACCTGCACGGGGCGCTACAGGACGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 ENSMUST00000212818.2 |
||
| CDS CCA 90 bp | CACTCCAACCGAAGAGCAAAGCAACCTAGGGCCACCTGCACCAGCTaGCAGGCAGGGGGTGGGGTGGTCACCATTAGGCGGTGGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSNRRAKQPRATCTS*QAGGGVVTIRRWLS Trigger: GGACAACCACCGCCTAATGGTGACCACCCCACCCCCTGCCTGCCAGCTGGTGCAGGTGGCCCTAGGTTGCTTTGCTCTTCGGTTGGAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
||
| CDS GCA 90 bp | AGGCCATCAGTGAACAGGGCTAGCGCATCGTCCTGTAGCGCCCCGTaGAGGTCAAAGTCTTCCACCAGAATCTGCCAGAGCACCGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: RPSVNRASASSCSAP*RSKSSTRICQSTAR Trigger: GCGCGCGGTGCTCTGGCAGATTCTGGTGGAAGACTTTGACCTGCACGGGGCGCTACAGGACGATGCGCTAGCCCTGTTCACTGATGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 ENSMUST00000212818.2 |
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| CDS GCA 90 bp | AGGATCTCACACTCCAACCGAAGAGCAAAGCAACCTAGGGCCACCTaGACCAGCTGGCAGGCAGGGGGTGGGGTGGTCACCATTAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RISHSNRRAKQPRAT*TSWQAGGGVVTIRR Trigger: CCGCCTAATGGTGACCACCCCACCCCCTGCCTGCCAGCTGGTGCAGGTGGCCCTAGGTTGCTTTGCTCTTCGGTTGGAGTGTGAGATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS CCA 90 bp | GTTCTGGCTCCAGCTCCTCTTCCAGAGCCCCATATGGTGGGCTGCTaGCCCGATGCATATCATCAGCTGGCGGTTCCCAGGGCTGACCTC | + |
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Preference number: 5 (lower is better) Translates to: VLAPAPLPEPHMVGC*PDAYHQLAVPRADL Trigger: GAGGTCAGCCCTGGGAACCGCCAGCTGATGATATGCATCGGGCCAGCAGCCCACCATATGGGGCTCTGGAAGAGGAGCTGGAGCCAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS TCA 90 bp | AGGCGAGTCCAGCCCTGGGGAAGGCTCACCATACAGACTGGCCTCTaGGCTCTCATCTTCCTGCAGGTCCTGATACAGGTCCACTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RRVQPWGRLTIQTGL*ALIFLQVLIQVHWG Trigger: GCCCCAGTGGACCTGTATCAGGACCTGCAGGAAGATGAGAGCTCAGAGGCCAGTCTGTATGGTGAGCCTTCCCCAGGGCTGGACTCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS TCA 90 bp | GGGCTGCTGGCCCGATGCATATCATCAGCTGGCGGTTCCCAGGGCTaGCCTCCAGAACCCCATAGTTTGGCACTCTGCTCCCAGAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: GLLARCISSAGGSQG*PPEPHSLALCSQSG Trigger: ACCACTCTGGGAGCAGAGTGCCAAACTATGGGGTTCTGGAGGTCAGCCCTGGGAACCGCCAGCTGATGATATGCATCGGGCCAGCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS CCA 90 bp | CATCAGCTGGCGGTTCCCAGGGCTGACCTCCAGAACCCCATAGTTTaGCACTCTGCTCCCAGAGTGGTGGCCTGTAAGCCAGCTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: HQLAVPRADLQNPIV*HSAPRVVACKPAPQ Trigger: CTGTGGAGCTGGCTTACAGGCCACCACTCTGGGAGCAGAGTGCCAAACTATGGGGTTCTGGAGGTCAGCCCTGGGAACCGCCAGCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR CAA 90 bp | GTGACAGCTCCTCCCACTGCCTGGGAGTGTGCCTCACTAACAGCAGAGGTGAACTGGTGGCTCCTCATCTaGGGCCAGGCGTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VTAPPTAWECASLTAEVNWWLLI*GQALLQ Trigger: CTGCAGCAACGCCTGGCCCAAGATGAGGAGCCACCA...GTTCACCTCTGCTGTTAGTGAGGCACACTCCCAGGCAGTGGGAGGAGCTGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS CCA 90 bp | CCACAGGAGGCGAGTCCAGCCCTGGGGAAGGCTCACCATACAGACTaGCCTCTGAGCTCTCATCTTCCTGCAGGTCCTGATACAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PQEASPALGKAHHTD*PLSSHLPAGPDTGP Trigger: TGGACCTGTATCAGGACCTGCAGGAAGATGAGAGCTCAGAGGCCAGTCTGTATGGTGAGCCTTCCCCAGGGCTGGACTCGCCTCCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTGCACCAGGGCTGAGACTGCACCAGGTGAGAGCGTTCCACGAAGGCTCTCCAGAACCCCATAGTTaGGCACTCTGCTCCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: PAAPGLRLHQVRAFHEGSPEPHS*ALCSQS Trigger: ACTCTGGGAGCAGAGTGCCAAACTATGGGGTTCTGG...AGAGCCTTCGTGGAACGCTCTCACCTGGTGCAGTCTCAGCCCTGGTGCAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR CAA 90 bp | TTCCACGAAGGCTCTACCCTCTTTCAACTGCAGGTCCTGAATGGCCCCTGGGGACAGAGGGTGGGTAGGTaGCCAGGGCTCAAGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: FHEGSTLFQLQVLNGPWGQRVGR*PGLKQL Trigger: CAGCTGCTTGAGCCCTGGCAACCTACCCACCCTCTG...TCCCCAGGGGCCATTCAGGACCTGCAGTTGAAAGAGGGTAGAGCCTTCGTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS GCA 90 bp | GTCTTGATAGTGGTGAACTCCTTTCTCCAGGGCAGCAGGTACAGGTaGACAGCGGCCAGCTCTAGGAGCTCAAAGGCGCGGGCCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: VLIVVNSFLQGSRYR*TAASSRSSKARARS Trigger: AGATCTGGCCCGCGCCTTTGAGCTCCTAGAGCTGGCCGCTGTGCACCTGTACCTGCTGCCCTGGAGAAAGGAGTTCACCACTATCAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS TCA 90 bp | CGAGCTCGGAGCAGCTCCTCGGCTGGTAGTACGCTTGTACCCAGCTaGGTCAGGACCTCACTTAGGATCTCACACTCCAACCGAAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: RARSSSSAGSTLVPS*VRTSLRISHSNRRA Trigger: TGCTCTTCGGTTGGAGTGTGAGATCCTAAGTGAGGTCCTGACTCAGCTGGGTACAAGCGTACTACCAGCCGAGGAGCTGCTCCGAGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR CAA 90 bp | GGGTATAACTTCTTCCTGGTTAGCTGCATGCCCAGAATGAGCTACGTGGAGTGGTGGTGGCTCCTCATCTaGGGCCAGGCGTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GYNFFLVSCMPRMSYVEWWWLLI*GQALLQ Trigger: CTGCAGCAACGCCTGGCCCAAGATGAGGAGCCACCA...CCACTCCACGTAGCTCATTCTGGGCATGCAGCTAACCAGGAAGAAGTTATACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS-3UTR CAA 90 bp | AATGAGGGGTCCTGGTCTACCCGCATGGGAGATGAGGGTATAACTTCTTCCTGGCCAGAACCCCATAGTTaGGCACTCTGCTCCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: NEGSWSTRMGDEGITSSWPEPHS*ALCSQS Trigger: ACTCTGGGAGCAGAGTGCCAAACTATGGGGTTCTGG...CCAGGAAGAAGTTATACCCTCATCTCCCATGCGGGTAGACCAGGACCCCTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS TCA 72 bp | CCGGTGCCAGGTCAGCCCGCCCCCACAGGCCATCAGTaGACAGGGCTAGCGCATCGTCCTGTAGCGCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: PVPGQPAPTGHQ*TGLAHRPVAPR Trigger: ACGGGGCGCTACAGGACGATGCGCTAGCCCTGTTCACTGATGGCCTGTGGGGGCGGGCTGACCTGGCACCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 ENSMUST00000212818.2 |
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| CDS GCA 72 bp | GAGCTCAAAGGCGCGGGCCAGATCTTGGAGGGCCGGTaGCAGGTCAGCCCGCCCCCACAGGCCATCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: ELKGAGQILEGR*QVSPPPQAISE Trigger: TTCACTGATGGCCTGTGGGGGCGGGCTGACCTGGCACCGGCCCTCCAAGATCTGGCCCGCGCCTTTGAGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 ENSMUST00000212818.2 |
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| CDS GCA 72 bp | AACAGCAGGCCCATAGGCCGAGGATGCAGCTGCTTCTaGCTGCCTGTGTCGGGGGCTGGCTTGCCCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: NSRPIGRGCSCF*LPVSGAGLPGA Trigger: AGCCCCGGGCAAGCCAGCCCCCGACACAGGCAGGCAGAAGCAGCTGCATCCTCGGCCTATGGGCCTGCTGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS GCA 72 bp | AGCGCCCCGTGCAGGTCAAAGTCTTCCACCAGAATCTaGCAGAGCACCGCGCGCAGCGAGGGGTCGCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: SAPCRSKSSTRI*QSTARSEGSPQ Trigger: TTGCGGCGACCCCTCGCTGCGCGCGGTGCTCTGGCAGATTCTGGTGGAAGACTTTGACCTGCACGGGGCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 ENSMUST00000212818.2 |
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| CDS GCA 72 bp | AGGCTCAACAGCAGGCCCATAGGCCGAGGATGCAGCTaGTTCTGCCTGCCTGTGTCGGGGGCTGGCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RLNSRPIGRGCS*FCLPVSGAGLP Trigger: GGGCAAGCCAGCCCCCGACACAGGCAGGCAGAAGCAGCTGCATCCTCGGCCTATGGGCCTGCTGTTGAGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS CCA 72 bp | CCCATAAGTGGCAGGTGTGCCCCGAGGGGGCAGAGGTaGTGGCTCCTCATCTTGGGCCAGGCGTTGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PISGRCAPRGQR*WLLILGQALLQ Trigger: CTGCAGCAACGCCTGGCCCAAGATGAGGAGCCACCACCTCTGCCCCCTCGGGGCACACCTGCCACTTATGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS GCA 72 bp | GCTGGCGGCAGGTGTCACAGCAGAGGGTGGGTAGGTTaGCAGGGCTCAAGCAGCTGTGTGCCTGGTAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: AGGRCHSRGWVG*QGSSSCVPGSS Trigger: TGAGCTACCAGGCACACAGCTGCTTGAGCCCTGGCAACCTACCCACCCTCTGCTGTGACACCTGCCGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS CCA 72 bp | GCTCTCATCTTCCTGCAGGTCCTGATACAGGTCCACTaGGGCCCCATAAGTGGCAGGTGTGCCCCGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALIFLQVLIQVH*GPISGRCAPRG Trigger: CCCCCTCGGGGCACACCTGCCACTTATGGGGCCCCAGTGGACCTGTATCAGGACCTGCAGGAAGATGAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS GCA 72 bp | GCTCCAGCTCCTCTTCCAGAGCCCCATATGGTGGGCTaGTGGCCCGATGCATATCATCAGCTGGCGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: APAPLPEPHMVG*WPDAYHQLAVP Trigger: GGGAACCGCCAGCTGATGATATGCATCGGGCCAGCAGCCCACCATATGGGGCTCTGGAAGAGGAGCTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS CCA 72 bp | GCGGTTCCCAGGGCTGACCTCCAGAACCCCATAGTTTaGCACTCTGCTCCCAGAGTGGTGGCCTGTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVPRADLQNPIV*HSAPRVVACKP Trigger: TGGCTTACAGGCCACCACTCTGGGAGCAGAGTGCCAAACTATGGGGTTCTGGAGGTCAGCCCTGGGAACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS TCA 72 bp | GCCCGATGCATATCATCAGCTGGCGGTTCCCAGGGCTaGCCTCCAGAACCCCATAGTTTGGCACTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ARCISSAGGSQG*PPEPHSLALCS Trigger: GGAGCAGAGTGCCAAACTATGGGGTTCTGGAGGTCAGCCCTGGGAACCGCCAGCTGATGATATGCATCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS GCA 72 bp | GTGAACAGGGCTAGCGCATCGTCCTGTAGCGCCCCGTaGAGGTCAAAGTCTTCCACCAGAATCTGCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: VNRASASSCSAP*RSKSSTRICQS Trigger: GCTCTGGCAGATTCTGGTGGAAGACTTTGACCTGCACGGGGCGCTACAGGACGATGCGCTAGCCCTGTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 ENSMUST00000212818.2 |
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| CDS CCA 72 bp | GCGAGTCCAGCCCTGGGGAAGGCTCACCATACAGACTaGCCTCTGAGCTCTCATCTTCCTGCAGGTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ASPALGKAHHTD*PLSSHLPAGPD Trigger: ATCAGGACCTGCAGGAAGATGAGAGCTCAGAGGCCAGTCTGTATGGTGAGCCTTCCCCAGGGCTGGACTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS TCA 72 bp | CAGCCCTGGGGAAGGCTCACCATACAGACTGGCCTCTaGGCTCTCATCTTCCTGCAGGTCCTGATACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QPWGRLTIQTGL*ALIFLQVLIQV Trigger: GACCTGTATCAGGACCTGCAGGAAGATGAGAGCTCAGAGGCCAGTCTGTATGGTGAGCCTTCCCCAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS CAA 72 bp | GTCGAGCTCGGAGCAGCTCCTCGGCTGGTAGTACGCTaGTACCCAGCTGAGTCAGGACCTCACTTAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: VELGAAPRLVVR*YPAESGPHLGS Trigger: AGATCCTAAGTGAGGTCCTGACTCAGCTGGGTACAAGCGTACTACCAGCCGAGGAGCTGCTCCGAGCTCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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| CDS TCA 72 bp | AGCAGCTCCTCGGCTGGTAGTACGCTTGTACCCAGCTaGGTCAGGACCTCACTTAGGATCTCACACTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: SSSSAGSTLVPS*VRTSLRISHSN Trigger: GTTGGAGTGTGAGATCCTAAGTGAGGTCCTGACTCAGCTGGGTACAAGCGTACTACCAGCCGAGGAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098327.2 ENSMUST00000166768.3 |
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