Pregenerated sensors for SPATA20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020867Ensembl transcript IDs: ENSMUST00000041705.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGCTGTGATCACCTGGAGGCAGGGTACCCAGGAGTAGCTATAGGTTaGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GCDHLEAGYPGVAIG*VLASQGLSLWSVGK Trigger: TTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTCCAGGTGATCACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| 3UTR-3UTR GCA 90 bp | GTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGTCAGTTGGAAAATTCTaGCTTCTGGCCCAGCTCATA | + |
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Preference number: 2 (lower is better) Translates to: VPRSSYRFGISLSRPESLSVGKF*LLAQLI Trigger: TATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGA...CAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| 3UTR CCA 72 bp | GGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTaGAAAATTCTGCCTTCTGGCCCAGCTCATAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: GISLSRPESLVS*KILPSGPAHRV Trigger: AACCCTATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGCTGGGACGCGGCGCATaGGCTCAGAGAAGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: EAGYPGVAIGLVLASQGLLGRGA*AQRRLS Trigger: TGACAGCCTTCTCTGAGCGCATGCGCCGCGTCCCAG...CAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | GTGAGTAGGTGCCCATGGGGGAGCCGCAAGGATGGCTGTGATCACCTGGAGGCATCCATCCAATCCTTGTaGCCAGTGAAGCTGTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: VSRCPWGSRKDGCDHLEASIQSL*PVKLCN Trigger: GTTGCACAGCTTCACTGGCCACAAGGATTGGATGGA...TGCCTCCAGGTGATCACAGCCATCCTTGCGGCTCCCCCATGGGCACCTACTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCCTCAGGCAAGGCCACTaGGACGCGGCGCATGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: ISLSRPESLVSWKILPSGLRQGH*DAAHAL Trigger: GAGCGCATGCGCCGCGTCCCAGTGGCCTTGCCTGAG...GCCAGAAGGCAGAATTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | GGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCCCAGAAGGGCTGTGGTaGCGCGCTGGCTGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GYPGVAIGLVLASQGLSLPEGLW*RAGCSP Trigger: TGGAGAACAGCCAGCGCGTCACCACAGCCCTTCTGG...GAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGTTGTCCTGTGTGTCCTaGAGGCGCAGAGCCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: EAGYPGVAIGLVLASQGLLSCVS*RRRAHS Trigger: TGAGTGGGCTCTGCGCCTGCAGGACACACAGGACAA...CAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | CTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCCCAGCTCATAGGGTTCTGGGCACCAGCTCAGCCTCACTaGAGAAGTAGCCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: LWSVGKFCLLAQLIGFWAPAQPH*RSSHHL Trigger: GAGGTGGTGGCTACTTCTGCAGTGAGGCTGAGCTGG...TGCCCAGAACCCTATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGACCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | GTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGACAGGTGTGGGAAACTTaGGGGCCTCGGCGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VAIGLVLASQGLSLWSVGQVWET*GPRRSR Trigger: GCGGCTTCGCCGAGGCCCCCAAGTTTCCCACACCTG...TCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | CTGAGTCTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCCCAGCTCATAGGGTTCGCCACTGTCGGTCCGTaGAGTAGCGGTGAAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LSLWSVGKFCLLAQLIGFATVGP*SSGESP Trigger: AGGGCTTTCACCGCTACTCCACGGACCGACAGTGGC...GAACCCTATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGACCAGAGACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | GCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAAAGGTCAGCGGCTCGCTaGCGCCTACCACGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AIGLVLASQGLSLWSVGKRSAAR*RLPRAL Trigger: CAGAGCCCGTGGTAGGCGCCAGCGAGCCGCTGACCT...TTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | TACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTGTCCCGGGAAGAGCTaGCCCTTTCTGAACCACGGG | + |
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Preference number: 4 (lower is better) Translates to: YPGVAIGLVLASQGLSLWCPGKS*PFLNHG Trigger: CCCGTGGTTCAGAAAGGGGCAGCTCTTCCCGGGACA...CCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTCCACGGGGGAGACCGTaGCCTTTGTGCTCCCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: RSSYRFGISLSRPESLVSPRGRP*PLCSPL Trigger: TAAGGGGGAGCACAAAGGCCACGGTCTCCCCCGTGG...ACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | CTGAGTCTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCCCAGCTCATAGGGTTCCGATGTTTCCGGGCCTaGAAGAGCTTCTCCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LSLWSVGKFCLLAQLIGFRCFRA*KSFSSP Trigger: AGGGCTGGAGAAGCTCTTCCAGGCCCGGAAACATCG...GAACCCTATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGACCAGAGACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| 3UTR CAA 72 bp | CACCTGGAGGCAGGGTACCCAGGAGTAGCTATAGGTTaGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: HLEAGYPGVAIG*VLASQGLSLWS Trigger: TGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTCCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | ATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCGTCTGTCACCCACGCTaGTCTCAGATCGGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ISLSRPESLVSWKILPSGVCHPR*SQIGPE Trigger: TTCTGGCCCGATCTGAGATCAGCGTGGGTGACAGAC...GCCAGAAGGCAGAATTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | GCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAATGCAACGCCATCTGCTaGGCTCGGGAGCCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AIGLVLASQGLSLWSVGKCNAIC*AREPSW Trigger: CCAGGATGGCTCCCGAGCTCAGCAGATGGCGTTGCA...TTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | GGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCCTCAAGAAGGGAAGCTaGCGGGACAGGAAGCTCGAT | + |
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Preference number: 4 (lower is better) Translates to: GYPGVAIGLVLASQGLSLLKKGS*RDRKLD Trigger: ATCGAGCTTCCTGTCCCGTCAGCTTCCCTTCTTGAG...GAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | AGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTGACGGTCTTCGGCGGTaGAGGTGGAGGACAGTTAGT | + |
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Preference number: 4 (lower is better) Translates to: RVPRSSYRFGISLSRPESDGLRR*RWRTVS Trigger: ACTAACTGTCCTCCACCTGCACCGCCGAAGACCGTC...AGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | TACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGAGTCAAACCATCCTCTaGCGGGAAGTAGGTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: YPGVAIGLVLASQGLSLWSQTIL*REVGAP Trigger: GGGGGCACCTACTTCCCGCCAGAGGATGGTTTGACT...CCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | AGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTTCAGGATCACAGGTGTaGGAAACTTGGGGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RVPRSSYRFGISLSRPESSGSQV*ETWGPR Trigger: CCGAGGCCCCCAAGTTTCCCACACCTGTGATCCTGA...AGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCGGCTCTGCGCCATCCTaGTCATCCTTCAGACGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PRSSYRFGISLSRPESLVGSAPS*SSFRRR Trigger: TCTTCGTCTGAAGGATGACCAGGATGGCGCAGAGCC...GACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | GAGGCAGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGCATTTTCTCAAAGTaGGGGATGTGCCACTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: EAGYPGVAIGLVLASQGLSIFSK*GMCHCR Trigger: CCGACAGTGGCACATCCCTCACTTTGAGAAAATGCT...CAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | CTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCCCAGCTCATAGGGTTCTGGGCAGGAGTCAGCATCCTCTaGACTGTAAAAGCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LWSVGKFCLLAQLIGFWAGVSIL*TVKASR Trigger: TCTGGAGGCTTTTACAGTGCAGAGGATGCTGACTCC...TGCCCAGAACCCTATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGACCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | TACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGCCCAGCATGGTGGGTTaGTTTGCTCCACAGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: YPGVAIGLVLASQGLSLWPSMVG*FAPQFL Trigger: GAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGG...CCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTGGTGGCAGCAGAGGCTaGAATCTGTCTGTCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: RSSYRFGISLSRPESLVSGGSRG*NLSVTH Trigger: GTGGGTGACAGACAGATTCCAGCCTCTGCTGCCACC...ACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | GTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGATGCTTCATTAGGAGCTaGCCTGAGGTCAGCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VAIGLVLASQGLSLWSVGCFIRS*PEVSGS Trigger: CGAGCCGCTGACCTCAGGCCAGCTCCTAATGAAGCA...TCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | AGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTACAGTTAGTCCGGCTTaGCTTTCCTCCAGCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RVPRSSYRFGISLSRPESTVSPA*LSSSRH Trigger: ATGCCTGCTGGAGGAAAGTCAAGCCGGACTAACTGT...AGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | GAGGCAGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGGCTGTTGGACCTCTTTaGCTGTCCACACATAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: EAGYPGVAIGLVLASQGLAVGPL*LSTHSK Trigger: CTTACTATGTGTGGACAGTCAAAGAGGTCCAACAGC...CAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | AGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTATGGAGTGGACACATTaGAGCAGGGCCTTGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RSSYRFGISLSRPESLVSMEWTH*SRALVS Trigger: GGACACCAAGGCCCTGCTGCAATGTGTCCACTCCAT...ACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | TACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGAGCCTCCTCCACTACTaGTGGCCTGCACAAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: YPGVAIGLVLASQGLSLWSLLHY*WPAQKS Trigger: TGACTTTTGTGCAGGCCACCAGTAGTGGAGGAGGCT...CCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTACCGAGAGTTGGGCCTaGTCATACAGCATTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GGRVPRSSYRFGISLSRPTESWA*SYSIFS Trigger: TGAGAAAATGCTGTATGACCAGGCCCAACTCTCGGT...AGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | GGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTCTGGGAGTAGCTGTTaGACCTCTTTGACTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GYPGVAIGLVLASQGLSLSGSSC*TSLTVH Trigger: GTGGACAGTCAAAGAGGTCCAACAGCTACTCCCAGA...GAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTCTTCAGGCGGCCGCTaGACACATCAAACATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSSYRFGISLSRPESLVSSSGGR*THQTCA Trigger: GGCACATGTTTGATGTGTCCAGCGGCCGCCTGAAGA...ACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTATCATGTGGCACCAGTaGCAGGTAGAGTACCCCACT | + |
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Preference number: 4 (lower is better) Translates to: RSSYRFGISLSRPESLVSIMWHQ*QVEYPT Trigger: AGTGGGGTACTCTACCTGTCACTGGTGCCACATGAT...ACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | GGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTCAGCCACACATTCATTaGCCAGCCTCCTCCACTACT | + |
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Preference number: 4 (lower is better) Translates to: GVAIGLVLASQGLSLWSVQPHIH*PASSTT Trigger: AGTAGTGGAGGAGGCTGGCCAATGAATGTGTGGCTG...AACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | GTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGGTAGAGTACCCCACTaGGAGAAAAATCGGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VPRSSYRFGISLSRPESLGRVPH*EKNRLV Trigger: AACAAGCCGATTTTTCTCTCAGTGGGGTACTCTACC...CAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | CTGAGTCTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCCCAGCTCATAGGGTTCCCACTACTGGTGGCCTaGACAAAAGTCATGTATACT | + |
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Preference number: 4 (lower is better) Translates to: LSLWSVGKFCLLAQLIGFPLLVA*TKVMYT Trigger: AGTATACATGACTTTTGTGCAGGCCACCAGTAGTGG...GAACCCTATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGACCAGAGACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | ATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAATTCCCCTCATCCAGCTGCTaGAAGCAACGGCTGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: IGLVLASQGLSLWSVGKFPSSSC*KQRLFM Trigger: CATGAACAGCCGTTGCTTCCAGCAGCTGGATGAGGG...GAATTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | ATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAATTCAGACCGTGGCCTTTGTaGTCCCCCTTATGTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: IGLVLASQGLSLWSVGKFRPWPL*SPLCFG Trigger: CCCAAAACATAAGGGGGAGCACAAAGGCCACGGTCT...GAATTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCTATTGCCTACTTCACTaGGTCCATAGTGCTTCATTA | + |
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Preference number: 4 (lower is better) Translates to: PRSSYRFGISLSRPESLVYCLLH*VHSASL Trigger: TAATGAAGCACTATGGACTCAGTGAAGTAGGCAATA...GACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CCA 90 bp | ATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAATTCATTTGGCACCGCTGGTaGCCTGGGCAACTAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: IGLVLASQGLSLWSVGKFIWHRW*PGQLTF Trigger: AAAAGTTAGTTGCCCAGGCCACCAGCGGTGCCAAAT...GAATTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR GCA 90 bp | GGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGACACATCAAACATGTaGCGCTTAAGGAATTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVAIGLVLASQGLSLWSVDTSNM*RLRNLA Trigger: TGCCAAATTCCTTAAGCGGCACATGTTTGATGTGTC...AACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS GCA 90 bp | GGGCTCTGCGCCATCCTGGTCATCCTTCAGACGAAGAGGCAGGTCTaGCCCCAGCTCAGCCTCACTGCAGAAGTAGCCACCACCTCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GLCAILVILQTKRQV*PQLSLTAEVATTSG Trigger: CCCCGAGGTGGTGGCTACTTCTGCAGTGAGGCTGAGCTGGGGGCAGACCTGCCTCTTCGTCTGAAGGATGACCAGGATGGCGCAGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 90 bp | TCGAGTCAAACCATCCTCTGGCGGGAAGTAGGTGCCCCCAACGAATaGCTGGAGGCCGGGGGTCAGCCACACATTCATTGGCCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSQTILWREVGAPNE*LEAGGQPHIHWPAS Trigger: GGAGGCTGGCCAATGAATGTGTGGCTGACCCCCGGCCTCCAGCCATTCGTTGGGGGCACCTACTTCCCGCCAGAGGATGGTTTGACTCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS GCA 90 bp | CAACCGAAGGAGGTTGTGGGCCGACACAGAGTTAGCACTGGGCTCTaGGCCATCCTGGTCATCCTTCAGACGAAGAGGCAGGTCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QPKEVVGRHRVSTGL*AILVILQTKRQVCP Trigger: GGGGCAGACCTGCCTCTTCGTCTGAAGGATGACCAGGATGGCGCAGAGCCCAGTGCTAACTCTGTGTCGGCCCACAACCTCCTTCGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS GCA 90 bp | TTCGGAAGCCAACTCGAGTCAAACCATCCTCTGGCGGGAAGTAGGTaGCCCCAACGAATGGCTGGAGGCCGGGGGTCAGCCACACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FGSQLESNHPLAGSR*PQRMAGGRGSATHS Trigger: TGAATGTGTGGCTGACCCCCGGCCTCCAGCCATTCGTTGGGGGCACCTACTTCCCGCCAGAGGATGGTTTGACTCGAGTTGGCTTCCGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 90 bp | AGTAGCGGTGAAAGCCCTGCCCCACATGATCCTGGATGCCTCCGTTaGCCATCATCTTCAGGGTGTGCAACGCCATCTGCTGAGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGESPAPHDPGCLR*PSSSGCATPSAELG Trigger: CCCGAGCTCAGCAGATGGCGTTGCACACCCTGAAGATGATGGCCAACGGAGGCATCCAGGATCATGTGGGGCAGGGCTTTCACCGCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS TCA 90 bp | CGCTGGCGCCTACCACGGGCTCTGGGAGTAGCTGTTGGACCTCTTTaGCTGTCCACACATAGTAAGCACCCTCTTGGGGCTTCATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RWRLPRALGVAVGPL*LSTHSKHPLGASCL Trigger: GAGGCATGAAGCCCCAAGAGGGTGCTTACTATGTGTGGACAGTCAAAGAGGTCCAACAGCTACTCCCAGAGCCCGTGGTAGGCGCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS GCA 90 bp | GGAAACCCCAGCATGGTGGGTTGCTTTGCTCCACAGTTCCTCCGGTaGCAGCATAGCATGTCCTCTTCAGGCGGCCGCTGGACACATCAA | + |
|
Preference number: 5 (lower is better) Translates to: GNPSMVGCFAPQFLR*QHSMSSSGGRWTHQ Trigger: TTGATGTGTCCAGCGGCCGCCTGAAGAGGACATGCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 90 bp | TCTCATCAACACTGTTCGGAAGCCAACTCGAGTCAAACCATCCTCTaGCGGGAAGTAGGTGCCCCCAACGAATGGCTGGAGGCCGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHQHCSEANSSQTIL*REVGAPNEWLEAGG Trigger: ACCCCCGGCCTCCAGCCATTCGTTGGGGGCACCTACTTCCCGCCAGAGGATGGTTTGACTCGAGTTGGCTTCCGAACAGTGTTGATGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 90 bp | GAGGCCCCGTACCACAAAGGCATAGTCCTCCAGGAAACCCCAGCATaGTGGGTTGCTTTGCTCCACAGTTCCTCCGGTGCCAGCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAPYHKGIVLQETPA*WVALLHSSSGASIA Trigger: TGCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTATGCCTTTGTGGTACGGGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 90 bp | ATCCAGCTGCTGGAAGCAACGGCTGTTCATGGTGGCAGCAGAGGCTaGAATCTGTCTGTCACCCACGCTGATCTCAGATCGGGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IQLLEATAVHGGSRG*NLSVTHADLRSGQK Trigger: CTTCTGGCCCGATCTGAGATCAGCGTGGGTGACAGACAGATTCCAGCCTCTGCTGCCACCATGAACAGCCGTTGCTTCCAGCAGCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 90 bp | AGCATCTTGTTGTCTAGGTGTGCTTTCGGCCGATGTTTCCGGGCCTaGAAGAGCTTCTCCAGCCCTGTGTTGAGCAAGGCCCTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SILLSRCAFGRCFRA*KSFSSPVLSKALTA Trigger: GGCTGTGAGGGCCTTGCTCAACACAGGGCTGGAGAAGCTCTTCCAGGCCCGGAAACATCGGCCGAAAGCACACCTAGACAACAAGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 90 bp | GCCCCGTACCACAAAGGCATAGTCCTCCAGGAAACCCCAGCATGGTaGGTTGCTTTGCTCCACAGTTCCTCCGGTGCCAGCATAGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: APYHKGIVLQETPAW*VALLHSSSGASIAC Trigger: ACATGCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTATGCCTTTGTGGTACGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 90 bp | GGCCGGGGGTCAGCCACACATTCATTGGCCAGCCTCCTCCACTACTaGTGGCCTGCACAAAAGTCATGTATACTTTGTCCACATCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGSATHSLASLLHY*WPAQKSCILCPHLA Trigger: GGCCAGATGTGGACAAAGTATACATGACTTTTGTGCAGGCCACCAGTAGTGGAGGAGGCTGGCCAATGAATGTGTGGCTGACCCCCGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCGTAGCACTTCGGTCCTaGTCCCGGGAAGAGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSSYRFGISLSRPESLVVALRS*SREELP Trigger: GGGCAGCTCTTCCCGGGACAAGGACCGAAGTGCTAC...GACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCATTGCAGCAGGGCCTaGGTGTCCTTGGCCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVPRSSYRFGISLSRPESHCSRA*VSLAWG Trigger: CCCCCAGGCCAAGGACACCAAGGCCCTGCTGCAATG...AGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS GCA 90 bp | GTACCACAAAGGCATAGTCCTCCAGGAAACCCCAGCATGGTGGGTTaGTTTGCTCCACAGTTCCTCCGGTGCCAGCATAGCATGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPQRHSPPGNPSMVG*FAPQFLRCQHSMSS Trigger: AGAGGACATGCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTATGCCTTTGTGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 90 bp | CGGGGGTCAGCCACACATTCATTGGCCAGCCTCCTCCACTACTGGTaGCCTGCACAAAAGTCATGTATACTTTGTCCACATCTGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSATHSLASLLHYW*PAQKSCILCPHLAA Trigger: AGCGGCCAGATGTGGACAAAGTATACATGACTTTTGTGCAGGCCACCAGTAGTGGAGGAGGCTGGCCAATGAATGTGTGGCTGACCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 90 bp | CATACAGCATTTTCTCAAAGTGAGGGATGTGCCACTGTCGGTCCGTaGAGTAGCGGTGAAAGCCCTGCCCCACATGATCCTGGATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTAFSQSEGCATVGP*SSGESPAPHDPGCL Trigger: GAGGCATCCAGGATCATGTGGGGCAGGGCTTTCACCGCTACTCCACGGACCGACAGTGGCACATCCCTCACTTTGAGAAAATGCTGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 90 bp | ACATCAAACATGTGCCGCTTAAGGAATTTGGCACCGCTGGTGGCCTaGGCAACTAACTTTTCCATACCCAGGGCAGCCCCCGTCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSNMCRLRNLAPLVA*ATNFSIPRAAPVTA Trigger: TGCTGTGACGGGGGCTGCCCTGGGTATGGAAAAGTTAGTTGCCCAGGCCACCAGCGGTGCCAAATTCCTTAAGCGGCACATGTTTGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | GGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTTCTCCAGCCCTGTGTaGAGCAAGGCCCTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GYPGVAIGLVLASQGLSLFSSPV*SKALTA Trigger: GGCTGTGAGGGCCTTGCTCAACACAGGGCTGGAGAA...GAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGGGTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGGCTCCCCCTTATGTTTaGGGGGTGGTGAGGAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: EAGYPGVAIGLVLASQGLAPPYV*GVVRNG Trigger: ACCATTCCTCACCACCCCCAAAACATAAGGGGGAGC...CAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTACCCTGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS GCA 90 bp | TCTCAAATATGTAGACTGTGGCCCGGTCTTCTACTCTTCGAAGGCTaGTCAAGAAGGGAAGCTGACGGGACAGGAAGCTCGATGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQICRLWPGLLLFEG*SRREADGTGSSMGL Trigger: GAGACCCATCGAGCTTCCTGTCCCGTCAGCTTCCCTTCTTGAGCAGCCTTCGAAGAGTAGAAGACCGGGCCACAGTCTACATATTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | CTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCCCAGCTCATAGGGTTCTGGGCAATAGACCACCGAGAGTaGGGCCTGGTCATACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LWSVGKFCLLAQLIGFWAIDHRE*GLVIQH Trigger: ATGCTGTATGACCAGGCCCAACTCTCGGTGGTCTAT...TGCCCAGAACCCTATGAGCTGGGCCAGAAGGCAGAATTTTCCAACTGACCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | TACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGCCCCAGCATGGTGGGTaGCTTTGCTCCACAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YPGVAIGLVLASQGLSLWPQHGG*LCSTVP Trigger: AGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGG...CCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | GTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAGGGTCCCAGAAGAGCTaGTCCTGTGTGTCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAIGLVLASQGLSLWSVGGSQKS*SCVSCR Trigger: CCTGCAGGACACACAGGACAAGCTCTTCTGGGACCC...TCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | GTACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGTCAGCCACACATTCATaGGCCAGCCTCCTCCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: VPRSSYRFGISLSRPESLSATHS*ASLLHY Trigger: GTAGTGGAGGAGGCTGGCCAATGAATGTGTGGCTGA...CAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | TACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGCAGGCAGCGAGCATCTaGTTGTCTAGGTGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YPGVAIGLVLASQGLSLWQAASI*LSRCAF Trigger: GAAAGCACACCTAGACAACAAGATGCTCGCTGCCTG...CCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS TCA 90 bp | ACGCGCTGGCTGTTCTCCAGAAGGGTGTTCTTGTTCAGTTTCCACTaGTCACAGATTCTCATCAACACTGTTCGGAAGCCAACTCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TRWLFSRRVFLFSFH*SQILINTVRKPTRV Trigger: GACTCGAGTTGGCTTCCGAACAGTGTTGATGAGAATCTGTGATCAGTGGAAACTGAACAAGAACACCCTTCTGGAGAACAGCCAGCGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | GCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAAGGGAGACCGTGGCCTTaGTGCTCCCCCTTATGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AIGLVLASQGLSLWSVGKGRPWP*CSPLCF Trigger: AAAACATAAGGGGGAGCACAAAGGCCACGGTCTCCC...TTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | TACCCAGGAGTAGCTATAGGTTTGGTATTAGCCTCTCAAGGCCTGAGTCTCTGGTATGGAGACTTCTCATaGATCAGGCGATTGACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YPGVAIGLVLASQGLSLWYGDFS*IRRLTV Trigger: GACCGTCAATCGCCTGATCAATGAGAAGTCTCCATA...CCAGAGACTCAGGCCTTGAGAGGCTAATACCAAACCTATAGCTACTCCTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS-3UTR CAA 90 bp | ATTAGCCTCTCAAGGCCTGAGTCTCTGGTCAGTTGGAAAATTCTGCCTTCTGGCAGGCATGGAGCAGGCTaGGTTCTCAAATATGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISLSRPESLVSWKILPSGRHGAG*VLKYVD Trigger: GTCTACATATTTGAGAACCAAGCCTGCTCCATGCCT...GCCAGAAGGCAGAATTTTCCAACTGACCAGAGACTCAGGCCTTGAGAGGCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 72 bp | GCTTCATTAGGAGCTGGCCTGAGGTCAGCGGCTCGCTaGCGCCTACCACGGGCTCTGGGAGTAGCTGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASLGAGLRSAAR*RLPRALGVAVG Trigger: TCCAACAGCTACTCCCAGAGCCCGTGGTAGGCGCCAGCGAGCCGCTGACCTCAGGCCAGCTCCTAATGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 72 bp | ACCATCCTCTGGCGGGAAGTAGGTGCCCCCAACGAATaGCTGGAGGCCGGGGGTCAGCCACACATTCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: TILWREVGAPNE*LEAGGQPHIHW Trigger: CCAATGAATGTGTGGCTGACCCCCGGCCTCCAGCCATTCGTTGGGGGCACCTACTTCCCGCCAGAGGATGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS GCA 72 bp | AGCATGGTGGGTTGCTTTGCTCCACAGTTCCTCCGGTaGCAGCATAGCATGTCCTCTTCAGGCGGCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMVGCFAPQFLR*QHSMSSSGGRW Trigger: CCAGCGGCCGCCTGAAGAGGACATGCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 72 bp | GAATGGCTGGAGGCCGGGGGTCAGCCACACATTCATTaGCCAGCCTCCTCCACTACTGGTGGCCTGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: EWLEAGGQPHIH*PASSTTGGLHK Trigger: TTTGTGCAGGCCACCAGTAGTGGAGGAGGCTGGCCAATGAATGTGTGGCTGACCCCCGGCCTCCAGCCATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 90 bp | GCAGGCATGGGCGCTGAACTACTAACTGTAGTAGCACTTCGGTCCTaGTCCCGGGAAGAGCTGCCCCTTTCTGAACCACGGGGGAGACCG | + |
|
Preference number: 6 (lower is better) Translates to: AGMGAELLTVVALRS*SREELPLSEPRGRP Trigger: CGGTCTCCCCCGTGGTTCAGAAAGGGGCAGCTCTTCCCGGGACAAGGACCGAAGTGCTACTACAGTTAGTAGTTCAGCGCCCATGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS GCA 72 bp | GTCCTCTTCAGGCGGCCGCTGGACACATCAAACATGTaGCGCTTAAGGAATTTGGCACCGCTGGTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLFRRPLDTSNM*RLRNLAPLVAW Trigger: CCAGGCCACCAGCGGTGCCAAATTCCTTAAGCGGCACATGTTTGATGTGTCCAGCGGCCGCCTGAAGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS GCA 72 bp | GAGGTTGTGGGCCGACACAGAGTTAGCACTGGGCTCTaGGCCATCCTGGTCATCCTTCAGACGAAGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVVGRHRVSTGL*AILVILQTKRQ Trigger: CTGCCTCTTCGTCTGAAGGATGACCAGGATGGCGCAGAGCCCAGTGCTAACTCTGTGTCGGCCCACAACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 72 bp | CCTCATCCAGCTGCTGGAAGCAACGGCTGTTCATGGTaGCAGCAGAGGCTGGAATCTGTCTGTCACCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: PHPAAGSNGCSW*QQRLESVCHPR Trigger: GCGTGGGTGACAGACAGATTCCAGCCTCTGCTGCCACCATGAACAGCCGTTGCTTCCAGCAGCTGGATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS GCA 72 bp | AGGCATAGTCCTCCAGGAAACCCCAGCATGGTGGGTTaGTTTGCTCCACAGTTCCTCCGGTGCCAGCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: RHSPPGNPSMVG*FAPQFLRCQHS Trigger: GCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 72 bp | CACTGTTCGGAAGCCAACTCGAGTCAAACCATCCTCTaGCGGGAAGTAGGTGCCCCCAACGAATGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HCSEANSSQTIL*REVGAPNEWLE Trigger: CTCCAGCCATTCGTTGGGGGCACCTACTTCCCGCCAGAGGATGGTTTGACTCGAGTTGGCTTCCGAACAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 72 bp | AGCCCTCATCCAGCTGCTGGAAGCAACGGCTGTTCATaGTGGCAGCAGAGGCTGGAATCTGTCTGTCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPHPAAGSNGCS*WQQRLESVCHP Trigger: TGGGTGACAGACAGATTCCAGCCTCTGCTGCCACCATGAACAGCCGTTGCTTCCAGCAGCTGGATGAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 72 bp | GAAAGCCCTGCCCCACATGATCCTGGATGCCTCCGTTaGCCATCATCTTCAGGGTGTGCAACGCCATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ESPAPHDPGCLR*PSSSGCATPSA Trigger: AGCAGATGGCGTTGCACACCCTGAAGATGATGGCCAACGGAGGCATCCAGGATCATGTGGGGCAGGGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 72 bp | TTGTCTAGGTGTGCTTTCGGCCGATGTTTCCGGGCCTaGAAGAGCTTCTCCAGCCCTGTGTTGAGCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSRCAFGRCFRA*KSFSSPVLSKA Trigger: GGCCTTGCTCAACACAGGGCTGGAGAAGCTCTTCCAGGCCCGGAAACATCGGCCGAAAGCACACCTAGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 72 bp | ATGTGCCGCTTAAGGAATTTGGCACCGCTGGTGGCCTaGGCAACTAACTTTTCCATACCCAGGGCAGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: MCRLRNLAPLVA*ATNFSIPRAAP Trigger: GGGGGCTGCCCTGGGTATGGAAAAGTTAGTTGCCCAGGCCACCAGCGGTGCCAAATTCCTTAAGCGGCACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 72 bp | CACAAAGGCATAGTCCTCCAGGAAACCCCAGCATGGTaGGTTGCTTTGCTCCACAGTTCCTCCGGTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HKGIVLQETPAW*VALLHSSSGAS Trigger: GCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTATGCCTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CAA 90 bp | GCAAAGCCAGAAACCATCAAGCCGTTCCAGGCAGCGAGCATCTTGTaGTCTAGGTGTGCTTTCGGCCGATGTTTCCGGGCCTGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AKPETIKPFQAASIL*SRCAFGRCFRAWKS Trigger: GCTCTTCCAGGCCCGGAAACATCGGCCGAAAGCACACCTAGACAACAAGATGCTCGCTGCCTGGAACGGCTTGATGGTTTCTGGCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS GCA 72 bp | TGTAGACTGTGGCCCGGTCTTCTACTCTTCGAAGGCTaGTCAAGAAGGGAAGCTGACGGGACAGGAAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CRLWPGLLLFEG*SRREADGTGSS Trigger: CGAGCTTCCTGTCCCGTCAGCTTCCCTTCTTGAGCAGCCTTCGAAGAGTAGAAGACCGGGCCACAGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CCA 72 bp | TACCACAAAGGCATAGTCCTCCAGGAAACCCCAGCATaGTGGGTTGCTTTGCTCCACAGTTCCTCCGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: YHKGIVLQETPA*WVALLHSSSGA Trigger: GGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTATGCCTTTGTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
||
| CDS CAA 72 bp | GGCGCTGAACTACTAACTGTAGTAGCACTTCGGTCCTaGTCCCGGGAAGAGCTGCCCCTTTCTGAACCACGG | + |
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Preference number: 6 (lower is better) Translates to: GAELLTVVALRS*SREELPLSEPR Trigger: CCGTGGTTCAGAAAGGGGCAGCTCTTCCCGGGACAAGGACCGAAGTGCTACTACAGTTAGTAGTTCAGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 72 bp | GAAACCATCAAGCCGTTCCAGGCAGCGAGCATCTTGTaGTCTAGGTGTGCTTTCGGCCGATGTTTCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ETIKPFQAASIL*SRCAFGRCFRA Trigger: GGCCCGGAAACATCGGCCGAAAGCACACCTAGACAACAAGATGCTCGCTGCCTGGAACGGCTTGATGGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 90 bp | ACAGCAAAGCCAGAAACCATCAAGCCGTTCCAGGCAGCGAGCATCTaGTTGTCTAGGTGTGCTTTCGGCCGATGTTTCCGGGCCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TAKPETIKPFQAASI*LSRCAFGRCFRAWK Trigger: CTTCCAGGCCCGGAAACATCGGCCGAAAGCACACCTAGACAACAAGATGCTCGCTGCCTGGAACGGCTTGATGGTTTCTGGCTTTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 90 bp | TTCAGGCGGCCGCTGGACACATCAAACATGTGCCGCTTAAGGAATTaGGCACCGCTGGTGGCCTGGGCAACTAACTTTTCCATACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FRRPLDTSNMCRLRN*APLVAWATNFSIPR Trigger: CCTGGGTATGGAAAAGTTAGTTGCCCAGGCCACCAGCGGTGCCAAATTCCTTAAGCGGCACATGTTTGATGTGTCCAGCGGCCGCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 90 bp | CACAAAGGCATAGTCCTCCAGGAAACCCCAGCATGGTGGGTTGCTTaGCTCCACAGTTCCTCCGGTGCCAGCATAGCATGTCCTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HKGIVLQETPAWWVA*LHSSSGASIACPLQ Trigger: CTGAAGAGGACATGCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTATGCCTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS TCA 72 bp | CTACCACGGGCTCTGGGAGTAGCTGTTGGACCTCTTTaGCTGTCCACACATAGTAAGCACCCTCTTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LPRALGVAVGPL*LSTHSKHPLGA Trigger: AGCCCCAAGAGGGTGCTTACTATGTGTGGACAGTCAAAGAGGTCCAACAGCTACTCCCAGAGCCCGTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 72 bp | ATCTCAGATCGGGCCAGAAGGGCTGTGGTGACGCGCTaGCTGTTCTCCAGAAGGGTGTTCTTGTTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISDRARRAVVTR*LFSRRVFLFSF Trigger: GAAACTGAACAAGAACACCCTTCTGGAGAACAGCCAGCGCGTCACCACAGCCCTTCTGGCCCGATCTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CCA 72 bp | TTTTCTCAAAGTGAGGGATGTGCCACTGTCGGTCCGTaGAGTAGCGGTGAAAGCCCTGCCCCACATGATCCT | + |
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Preference number: 6 (lower is better) Translates to: FSQSEGCATVGP*SSGESPAPHDP Trigger: AGGATCATGTGGGGCAGGGCTTTCACCGCTACTCCACGGACCGACAGTGGCACATCCCTCACTTTGAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 72 bp | CCAGAAACCATCAAGCCGTTCCAGGCAGCGAGCATCTaGTTGTCTAGGTGTGCTTTCGGCCGATGTTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: PETIKPFQAASI*LSRCAFGRCFR Trigger: CCGGAAACATCGGCCGAAAGCACACCTAGACAACAAGATGCTCGCTGCCTGGAACGGCTTGATGGTTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 72 bp | ATAGTCCTCCAGGAAACCCCAGCATGGTGGGTTGCTTaGCTCCACAGTTCCTCCGGTGCCAGCATAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: IVLQETPAWWVA*LHSSSGASIAC Trigger: ACATGCTATGCTGGCACCGGAGGAACTGTGGAGCAAAGCAACCCACCATGCTGGGGTTTCCTGGAGGACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 90 bp | TCTGGCCGCTCCTCTCGGTCCACCATGACACAGATGAAGTTCTCATaGAGCAGGCGCCCTATCTCTTCATTCTGGAAGGATTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SGRSSRSTMTQMKFS*SRRPISSFWKDSSS Trigger: GGAGGAGGAATCCTTCCAGAATGAAGAGATAGGGCGCCTGCTCAATGAGAACTTCATCTGTGTCATGGTGGACCGAGAGGAGCGGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 90 bp | CAGCCTCCTCCACTACTGGTGGCCTGCACAAAAGTCATGTATACTTaGTCCACATCTGGCCGCTCCTCTCGGTCCACCATGACACAGATG | + |
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Preference number: 6 (lower is better) Translates to: QPPPLLVACTKVMYT*STSGRSSRSTMTQM Trigger: CATCTGTGTCATGGTGGACCGAGAGGAGCGGCCAGATGTGGACAAAGTATACATGACTTTTGTGCAGGCCACCAGTAGTGGAGGAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 72 bp | CCACTACTGGTGGCCTGCACAAAAGTCATGTATACTTaGTCCACATCTGGCCGCTCCTCTCGGTCCACCATG | + |
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Preference number: 6 (lower is better) Translates to: PLLVACTKVMYT*STSGRSSRSTM Trigger: CATGGTGGACCGAGAGGAGCGGCCAGATGTGGACAAAGTATACATGACTTTTGTGCAGGCCACCAGTAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 72 bp | CCGCTGGACACATCAAACATGTGCCGCTTAAGGAATTaGGCACCGCTGGTGGCCTGGGCAACTAACTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PLDTSNMCRLRN*APLVAWATNFS Trigger: GGAAAAGTTAGTTGCCCAGGCCACCAGCGGTGCCAAATTCCTTAAGCGGCACATGTTTGATGTGTCCAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS TCA 72 bp | AGGACATTCTGGCCGTGCAGTTCCCCGTTGGGATCCTaGGAGGAGTTGATATTGCCTACTTCACTGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RTFWPCSSPLGS*EELILPTSLSP Trigger: TGGACTCAGTGAAGTAGGCAATATCAACTCCTCTCAGGATCCCAACGGGGAACTGCACGGCCAGAATGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 90 bp | TTCATCGCCAGAGATCTGGAAGGCCTGGGTATAGACCACCGAGAGTaGGGCCTGGTCATACAGCATTTTCTCAAAGTGAGGGATGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: FIARDLEGLGIDHRE*GLVIQHFLKVRDVP Trigger: TGGCACATCCCTCACTTTGAGAAAATGCTGTATGACCAGGCCCAACTCTCGGTGGTCTATACCCAGGCCTTCCAGATCTCTGGCGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS TCA 72 bp | TTCTGGAAGGATTCCTCCTCCATCATGTGGCACCAGTaGCAGGTAGAGTACCCCACTGAGAGAAAAATCGGC | + |
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Preference number: 6 (lower is better) Translates to: FWKDSSSIMWHQ*QVEYPTERKIG Trigger: GCCGATTTTTCTCTCAGTGGGGTACTCTACCTGTCACTGGTGCCACATGATGGAGGAGGAATCCTTCCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS CAA 72 bp | TCCTCTCGGTCCACCATGACACAGATGAAGTTCTCATaGAGCAGGCGCCCTATCTCTTCATTCTGGAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SSRSTMTQMKFS*SRRPISSFWKD Trigger: ATCCTTCCAGAATGAAGAGATAGGGCGCCTGCTCAATGAGAACTTCATCTGTGTCATGGTGGACCGAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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| CDS TCA 72 bp | CTGTTCTCCAGAAGGGTGTTCTTGTTCAGTTTCCACTaGTCACAGATTCTCATCAACACTGTTCGGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LFSRRVFLFSFH*SQILINTVRKP Trigger: TGGCTTCCGAACAGTGTTGATGAGAATCTGTGATCAGTGGAAACTGAACAAGAACACCCTTCTGGAGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041705.8 |
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