Pregenerated sensors for SPATA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047030Ensembl transcript IDs: ENSMUST00000057627.16, ENSMUST00000109211.9
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAAACCCATACCAGCTGAGCAGGAAGTGGAGAGGGCAGCGAAGTaGCTGAATGGAAGTGCCATCCTGTCCTTCGGACCACACAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PKPIPAEQEVERAAK*LNGSAILSFGPHSS Trigger: GCTGCTGTGTGGTCCGAAGGACAGGATGGCACTTCCATTCAGTCACTTCGCTGCCCTCTCCACTTCCTGCTCAGCTGGTATGGGTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | GGGCTCATTTCACAAGCCAGCAGGCCTCTAGCTCACCACTCCTGGTaGGGATTTGAAGGTGACCCCAAAGGCTCCTTCCCAGTCCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: GLISQASRPLAHHSW*GFEGDPKGSFPVQA Trigger: AGCTTGGACTGGGAAGGAGCCTTTGGGGTCACCTTCAAATCCCCACCAGGAGTGGTGAGCTAGAGGCCTGCTGGCTTGTGAAATGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | GGAGGGCTCATTTCACAAGCCAGCAGGCCTCTAGCTCACCACTCCTaGTGGGGATTTGAAGGTGACCCCAAAGGCTCCTTCCCAGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: GGLISQASRPLAHHS*WGFEGDPKGSFPVQ Trigger: TTGGACTGGGAAGGAGCCTTTGGGGTCACCTTCAAATCCCCACCAGGAGTGGTGAGCTAGAGGCCTGCTGGCTTGTGAAATGAGCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | GGCCTGTCCTCCATCTTAAGAGAGTCCCTGCAATGCTGGAGTGACTaGAATGCAGAGCTGGAGCTCTCAGGAAAGGGCCAGGCCTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: GLSSILRESLQCWSD*NAELELSGKGQALP Trigger: TGGCAAGGCCTGGCCCTTTCCTGAGAGCTCCAGCTCTGCATTCCAGTCACTCCAGCATTGCAGGGACTCTCTTAAGATGGAGGACAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR TCA 90 bp | AGGTGGCCTGTCCTCCATCTTAAGAGAGTCCCTGCAATGCTGGAGTaGCTGGAATGCAGAGCTGGAGCTCTCAGGAAAGGGCCAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: RWPVLHLKRVPAMLE*LECRAGALRKGPGL Trigger: AAGGCCTGGCCCTTTCCTGAGAGCTCCAGCTCTGCATTCCAGTCACTCCAGCATTGCAGGGACTCTCTTAAGATGGAGGACAGGCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | TCCTCAGGTGGCCTGTCCTCCATCTTAAGAGAGTCCCTGCAATGCTaGAGTGACTGGAATGCAGAGCTGGAGCTCTCAGGAAAGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SSGGLSSILRESLQC*SDWNAELELSGKGQ Trigger: CTGGCCCTTTCCTGAGAGCTCCAGCTCTGCATTCCAGTCACTCCAGCATTGCAGGGACTCTCTTAAGATGGAGGACAGGCCACCTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | CTAGGAGGGGAGAGGCCTTGCCAGTCTGTACACTGTATTTCCTGGTaGAACACACTGGACTTCCTCAGGTGGCCTGTCCTCCATCTTAAG | + |
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Preference number: 1 (lower is better) Translates to: LGGERPCQSVHCISW*NTLDFLRWPVLHLK Trigger: CTTAAGATGGAGGACAGGCCACCTGAGGAAGTCCAGTGTGTTCCACCAGGAAATACAGTGTACAGACTGGCAAGGCCTCTCCCCTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR TCA 90 bp | AAAGGAAAACCCAGAGGTGGGATTTATCCCAGGAAGTGTGGACACTaGATACTGGAGAGGCATCTAAGGAGCGCATCCCACCTCTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: KGKPRGGIYPRKCGH*ILERHLRSASHLCP Trigger: CGGGCAGAGGTGGGATGCGCTCCTTAGATGCCTCTCCAGTATTCAGTGTCCACACTTCCTGGGATAAATCCCACCTCTGGGTTTTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | AGAGGCCTTGCCAGTCTGTACACTGTATTTCCTGGTGGAACACACTaGACTTCCTCAGGTGGCCTGTCCTCCATCTTAAGAGAGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: RGLASLYTVFPGGTH*TSSGGLSSILRESL Trigger: CAGGGACTCTCTTAAGATGGAGGACAGGCCACCTGAGGAAGTCCAGTGTGTTCCACCAGGAAATACAGTGTACAGACTGGCAAGGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR GCA 90 bp | AGTGGCTCAGGGTTTGGCCAGAGTCAAGCCTGCTCCAGAACTGAATaGCTGCTTTGGGAAAACTACTTGCCCATAGATCCCAAACACTGG | + |
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Preference number: 1 (lower is better) Translates to: SGSGFGQSQACSRTE*LLWENYLPIDPKHW Trigger: CCAGTGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGTTCTGGAGCAGGCTTGACTCTGGCCAAACCCTGAGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | ACAGTAAGGGGGTTATGCAAACAGGAGGGGACGTCAGTCCTGCTATaGAGTCCACTTTCCAACTGCCAAGCAGAGCTTGCCAACATTGTG | + |
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Preference number: 1 (lower is better) Translates to: TVRGLCKQEGTSVLL*SPLSNCQAELANIV Trigger: CACAATGTTGGCAAGCTCTGCTTGGCAGTTGGAAAGTGGACTCCATAGCAGGACTGACGTCCCCTCCTGTTTGCATAACCCCCTTACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR TCA 90 bp | TCACAGTGGCTCAGGGTTTGGCCAGAGTCAAGCCTGCTCCAGAACTaGATGCCTGCTTTGGGAAAACTACTTGCCCATAGATCCCAAACA | + |
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Preference number: 1 (lower is better) Translates to: SQWLRVWPESSLLQN*MPALGKLLAHRSQT Trigger: TGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGTTCTGGAGCAGGCTTGACTCTGGCCAAACCCTGAGCCACTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR GCA 90 bp | CACCAGCAAATTCACAGTGGCTCAGGGTTTGGCCAGAGTCAAGCCTaGTCCAGAACTGAATGCCTGCTTTGGGAAAACTACTTGCCCATA | + |
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Preference number: 1 (lower is better) Translates to: HQQIHSGSGFGQSQA*SRTECLLWENYLPI Trigger: TATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGTTCTGGAGCAGGCTTGACTCTGGCCAAACCCTGAGCCACTGTGAATTTGCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | GTGTATAATATTTACCGTAGGGAAGACAGTAGCTCTCTACCACCATaGGAAGGAACATGGGCTTTATCAGTCCCTTACGCCAGGCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VYNIYRREDSSSLPP*EGTWALSVPYARLP Trigger: TGGGAGCCTGGCGTAAGGGACTGATAAAGCCCATGTTCCTTCCCATGGTGGTAGAGAGCTACTGTCTTCCCTACGGTAAATATTATACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 90 bp | GAATGCCTGCTTTGGGAAAACTACTTGCCCATAGATCCCAAACACTaGACATCACAACTGCCTATGGCTAAACTGTGTTCACACTTCACA | + |
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Preference number: 1 (lower is better) Translates to: ECLLWENYLPIDPKH*TSQLPMAKLCSHFT Trigger: TGTGAAGTGTGAACACAGTTTAGCCATAGGCAGTTGTGATGTCCAGTGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | CATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGGGGGCTGAGGTCGGCTGGAATGTGACCTaGTACGGGAGCCATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: HAQQAPRPDRAIDVGAEVGWNVT*YGSHVT Trigger: TGTCACATGGCTCCCGTAGCAGGTCACATTCCAGCC...GACCTCAGCCCCCACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCAGGGTACAGTCCAAGCTGGCTTTaGAGTGGGTGGGGCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GWRHPPPELPSEIQGSGYSPSWL*SGWGRC Trigger: ACACCTGCCCCACCCACTGCAAAGCCAGCTTGGACT...GTACCCTGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGCAGAGCTGGAGCTCTCAGGAAAGGGCCAGGCCTTGCCAGGTCTGAGGCTGACATCAAAGAGCTaGCCAGGAAGGCCAGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: WNAELELSGKGQALPGLRLTSKS*PGRPVS Trigger: TGAGACTGGCCTTCCTGGGCAGCTCTTTGATGTCAG...CCTCAGACCTGGCAAGGCCTGGCCCTTTCCTGAGAGCTCCAGCTCTGCATTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR CCA 90 bp | CCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCCCATCTTGTCACTGAGGTCAACAGCAGCCACTGGCTaGAATGTGACCTGCTACGGG | + |
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Preference number: 2 (lower is better) Translates to: PDRAIDVGAEVPILSLRSTAATG*NVTCYG Trigger: CCCGTAGCAGGTCACATTCCAGCCAGTGGCTGCTGT...TGACCTCAGTGACAAGATGGGGACCTCAGCCCCCACGTCTATAGCTCTGTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR CCA 90 bp | TGGGGACATCTGCCTAGGGATCCTTGTATCAAGGGAGCAGGAAAAGAGGCGAGCCTTCCCAGTCCAAGCTaGCTTTGCAGTGGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: WGHLPRDPCIKGAGKEASLPSPS*LCSGWG Trigger: GCCCCACCCACTGCAAAGCCAGCTTGGACTGGGAAG...GCTCGCCTCTTTTCCTGCTCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCCCACTGGCTGGAATGTaGCCTGCTACGGGAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: VLTSKSCPGRPVSGIKLPPLAGM*PATGAM Trigger: CATGGCTCCCGTAGCAGGTCACATTCCAGCCAGTGG...GGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGTCAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR TCA 90 bp | CCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCCCATCTTGTCACTGAGGTCAACATTGTGGGCTGGTTaGGTGGAGCTGGCAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: PDRAIDVGAEVPILSLRSTLWAG*VELARW Trigger: CCATCTTGCCAGCTCCACTCAACCAGCCCACAATGT...TGACCTCAGTGACAAGATGGGGACCTCAGCCCCCACGTCTATAGCTCTGTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | CATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGGGGGCTGAGGTCAGGGGTGGGGACATCTaGCTAGGGATCCTTGTATCA | + |
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Preference number: 2 (lower is better) Translates to: HAQQAPRPDRAIDVGAEVRGGDI*LGILVS Trigger: TGATACAAGGATCCCTAGGCAGATGTCCCCACCCCT...GACCTCAGCCCCCACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR CCA 90 bp | TGGAATGCAGAGCTGGAGCTCTCAGGAAAGGGCCAGGCCTTGCCAGGTCTGAGGCTGGTTGAGTGGAGCTaGCAAGATGGCATTCGACTA | + |
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Preference number: 2 (lower is better) Translates to: WNAELELSGKGQALPGLRLVEWS*QDGIRL Trigger: TAGTCGAATGCCATCTTGCCAGCTCCACTCAACCAG...CCTCAGACCTGGCAAGGCCTGGCCCTTTCCTGAGAGCTCCAGCTCTGCATTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCCAAACCCATACCAGCTaGGCAGGAAGTGGAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VLTSKSCPGRPVSGIKLPQTHTS*AGSGEG Trigger: GCCCTCTCCACTTCCTGCTCAGCTGGTATGGGTTTG...GGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGTCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTCCTGCTATGGAGTCCACTTTCCAACTGCCAAGCAGAGCTTGCCAACATTGGCTTTGCAGTGGGTaGGGCAGGTGTGGCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VSPAMESTFQLPSRACQHWLCSG*GRCGKS Trigger: ACTCTTGCCACACCTGCCCCACCCACTGCAAAGCCA...ATGTTGGCAAGCTCTGCTTGGCAGTTGGAAAGTGGACTCCATAGCAGGACTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR CCA 90 bp | CATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCCATGGGAAGGAACATaGGCTTTATCAGTCCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: HAQQAPRPDRAIDVGAEVPWEGT*ALSVPY Trigger: GTAAGGGACTGATAAAGCCCATGTTCCTTCCCATGG...GACCTCAGCCCCCACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR CCA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCCAGTGGCTCAGGGTTTaGCCAGAGTCAAGCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVQWLRV*PESSLL Trigger: GAGCAGGCTTGACTCTGGCCAAACCCTGAGCCACTG...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | AGATGGGGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCAATGCTAACCCCTGTGTaGACACTGGAGGTAGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: RWGWRHPPPELPSEIQGSMLTPV*TLEVGV Trigger: TACACCTACCTCCAGTGTGCACACAGGGGTTAGCAT...TGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCCCCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCACAGTAAGGGGGTTATaGAAACAGGAGGGGACGTCA | + |
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Preference number: 2 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVTVRGL*KQEGTS Trigger: TGACGTCCCCTCCTGTTTGCATAACCCCCTTACTGT...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCTTCAAATTCCTGCCCTaGCCCTCTCCCCAAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVFKFLP*PSPQKG Trigger: TCCTTTTTGGGGAGAGGGGCAGGGCAGGAATTTGAA...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR TCA 90 bp | CTAAACTGTGTTCACACTTCACAAGGAAGTGACAGCTTCAAATTCCTGCCCTGCGGGCAGCGAAGTGACTaGATGGAAGTGCCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LNCVHTSQGSDSFKFLPCGQRSD*MEVPSC Trigger: ACAGGATGGCACTTCCATTCAGTCACTTCGCTGCCC...GCAGGGCAGGAATTTGAAGCTGTCACTTCCTTGTGAAGTGTGAACACAGTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR GCA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCTGCTCCAGAACTGAATaGCTGCTTTGGGAAAACTAC | + |
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Preference number: 2 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVCSRTE*LLWENY Trigger: GTAGTTTTCCCAAAGCAGGCATTCAGTTCTGGAGCA...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR TCA 72 bp | AAGACTGAGAGCCGCGCTGACAGCCCCGGGAACCAGTaGGGAAGGCTAGATGGGGGTGGAGGCACCCACCGC | + |
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Preference number: 3 (lower is better) Translates to: KTESRADSPGNQ*GRLDGGGGTHR Trigger: GCGGTGGGTGCCTCCACCCCCATCTAGCCTTCCTCACTGGTTCCCGGGGCTGTCAGCGCGGCTCTCAGTCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | CAGCCCCGGGAACCAGTGAGGAAGGCTAGATGGGGGTaGAGGCACCCACCGCCTGAACTTCCTTCTGAGATT | + |
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Preference number: 3 (lower is better) Translates to: QPREPVRKARWG*RHPPPELPSEI Trigger: AATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCCCCATCTAGCCTTCCTCACTGGTTCCCGGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR TCA 72 bp | TCAGGAAAGGGCCAGGCCTTGCCAGGTCTGAGGTGCTaGCATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: SGKGQALPGLRC*HQRAAQEGQSQ Trigger: CTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGTCAGCACCTCAGACCTGGCAAGGCCTGGCCCTTTCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | AGTGCCATCCTGTCCTTCGGACCACACAGCAGCCACTaGCTGGAATGTGACCTGCTACGGGAGCCATGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SAILSFGPHSSH*LECDLLREPCD Trigger: GTCACATGGCTCCCGTAGCAGGTCACATTCCAGCCAGTGGCTGCTGTGTGGTCCGAAGGACAGGATGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR GCA 72 bp | GGAAGTGGAGAGGGCAGCGAAGTGACTGAATGGAAGTaGCATCCTGTCCTTCGGACCACACAGCAGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: GSGEGSEVTEWK*HPVLRTTQQPL Trigger: CAGTGGCTGCTGTGTGGTCCGAAGGACAGGATGGCACTTCCATTCAGTCACTTCGCTGCCCTCTCCACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | CCATCCTGTCCTTCGGACCACACAGCAGCCACTGGCTaGAATGTGACCTGCTACGGGAGCCATGTGACAAAG | + |
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Preference number: 3 (lower is better) Translates to: PSCPSDHTAATG*NVTCYGSHVTK Trigger: CTTTGTCACATGGCTCCCGTAGCAGGTCACATTCCAGCCAGTGGCTGCTGTGTGGTCCGAAGGACAGGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | TCACAAGCCAGCAGGCCTCTAGCTCACCACTCCTGGTaGGGATTTGAAGGTGACCCCAAAGGCTCCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SQASRPLAHHSW*GFEGDPKGSFP Trigger: TGGGAAGGAGCCTTTGGGGTCACCTTCAAATCCCCACCAGGAGTGGTGAGCTAGAGGCCTGCTGGCTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | GGGGAGAGGCCTTGCCAGTCTGTACACTGTATTTCCTaGTGGAACACACTGGACTTCCTCAGGTGGCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GERPCQSVHCIS*WNTLDFLRWPV Trigger: GACAGGCCACCTGAGGAAGTCCAGTGTGTTCCACCAGGAAATACAGTGTACAGACTGGCAAGGCCTCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR TCA 72 bp | ATACCAGCTGAGCAGGAAGTGGAGAGGGCAGCGAAGTaGCTGAATGGAAGTGCCATCCTGTCCTTCGGACCA | + |
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Preference number: 3 (lower is better) Translates to: IPAEQEVERAAK*LNGSAILSFGP Trigger: TGGTCCGAAGGACAGGATGGCACTTCCATTCAGTCACTTCGCTGCCCTCTCCACTTCCTGCTCAGCTGGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR GCA 72 bp | GGTGGCCTGTCCTCCATCTTAAGAGAGTCCCTGCAATaGTGGAGTGACTGGAATGCAGAGCTGGAGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: GGLSSILRESLQ*WSDWNAELELS Trigger: TGAGAGCTCCAGCTCTGCATTCCAGTCACTCCAGCATTGCAGGGACTCTCTTAAGATGGAGGACAGGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | GGGTTATGCAAACAGGAGGGGACGTCAGTCCTGCTATaGAGTCCACTTTCCAACTGCCAAGCAGAGCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: GLCKQEGTSVLL*SPLSNCQAELA Trigger: GGCAAGCTCTGCTTGGCAGTTGGAAAGTGGACTCCATAGCAGGACTGACGTCCCCTCCTGTTTGCATAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | GAGAGGCCTTGCCAGTCTGTACACTGTATTTCCTGGTaGAACACACTGGACTTCCTCAGGTGGCCTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: ERPCQSVHCISW*NTLDFLRWPVL Trigger: GAGGACAGGCCACCTGAGGAAGTCCAGTGTGTTCCACCAGGAAATACAGTGTACAGACTGGCAAGGCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR-3UTR CAA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCCAGCTCTGTTCCCTCTaGATGGGACCAAGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVQLCSL*MGPSQV Trigger: GACCTGGCTTGGTCCCATCAAGAGGGAACAGAGCTG...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR TCA 72 bp | CCCAGAGGTGGGATTTATCCCAGGAAGTGTGGACACTaGATACTGGAGAGGCATCTAAGGAGCGCATCCCAC | + |
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Preference number: 3 (lower is better) Translates to: PRGGIYPRKCGH*ILERHLRSASH Trigger: GTGGGATGCGCTCCTTAGATGCCTCTCCAGTATTCAGTGTCCACACTTCCTGGGATAAATCCCACCTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | CTACCCATTAATACCAGTCAGGGGGCAGACAAGGGGTaGGGACATCTGCCTAGGGATCCTTGTATCAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LPINTSQGADKG*GHLPRDPCIKG Trigger: TCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCACCCCTTGTCTGCCCCCTGACTGGTATTAATGGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| 3UTR CCA 72 bp | GAAGACAGTAGCTCTCTACCACCATGGGAAGGAACATaGGCTTTATCAGTCCCTTACGCCAGGCTCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EDSSSLPPWEGT*ALSVPYARLPA Trigger: AGCTGGGAGCCTGGCGTAAGGGACTGATAAAGCCCATGTTCCTTCCCATGGTGGTAGAGAGCTACTGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR-3UTR CAA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCACTCCTGGTGGGGATTaGAAGGTGACCCCAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVTPGGD*KVTPKA Trigger: AGCCTTTGGGGTCACCTTCAAATCCCCACCAGGAGT...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR TCA 72 bp | CAGCTTCCCCAGATGACCAAAGCAGTAGGATCCGTCTaGGTCCTGTCACTTGAGCTAACTGTGGTGTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLPQMTKAVGSV*VLSLELTVVSR Trigger: CCTAGACACCACAGTTAGCTCAAGTGACAGGACTCAGACGGATCCTACTGCTTTGGTCATCTGGGGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR CCA 72 bp | CCAAGCAGAGCTTGCCAACATTGTGGGCTGGTTGAGTaGAGCTGGCAAGATGGCATTCGACTAATACTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSRACQHCGLVE*SWQDGIRLILD Trigger: GTCCAGTATTAGTCGAATGCCATCTTGCCAGCTCCACTCAACCAGCCCACAATGTTGGCAAGCTCTGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR TCA 72 bp | CCTATGGCTAAACTGTGTTCACACTTCACAAGGAAGTaGCAGCTTCAAATTCCTGCCCTGCCCCTCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PMAKLCSHFTRK*QLQIPALPLSP Trigger: TGGGGAGAGGGGCAGGGCAGGAATTTGAAGCTGTCACTTCCTTGTGAAGTGTGAACACAGTTTAGCCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR TCA 72 bp | CTCAGGGTTTGGCCAGAGTCAAGCCTGCTCCAGAACTaGATGCCTGCTTTGGGAAAACTACTTGCCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRVWPESSLLQN*MPALGKLLAHR Trigger: TCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGTTCTGGAGCAGGCTTGACTCTGGCCAAACCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR GCA 72 bp | ATTCACAGTGGCTCAGGGTTTGGCCAGAGTCAAGCCTaGTCCAGAACTGAATGCCTGCTTTGGGAAAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: IHSGSGFGQSQA*SRTECLLWENY Trigger: GTAGTTTTCCCAAAGCAGGCATTCAGTTCTGGAGCAGGCTTGACTCTGGCCAAACCCTGAGCCACTGTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR CCA 72 bp | AGGAAAACCCAGAGGTGGGATTTATCCCAGGAAGTGTaGACACTGAATACTGGAGAGGCATCTAAGGAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RKTQRWDLSQEV*TLNTGEASKER Trigger: GCGCTCCTTAGATGCCTCTCCAGTATTCAGTGTCCACACTTCCTGGGATAAATCCCACCTCTGGGTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR CCA 72 bp | ATTTACCGTAGGGAAGACAGTAGCTCTCTACCACCATaGGAAGGAACATGGGCTTTATCAGTCCCTTACGCC | + |
|
Preference number: 3 (lower is better) Translates to: IYRREDSSSLPP*EGTWALSVPYA Trigger: GGCGTAAGGGACTGATAAAGCCCATGTTCCTTCCCATGGTGGTAGAGAGCTACTGTCTTCCCTACGGTAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR GCA 72 bp | CTCAAATTCTGTATGTACAATACAGTAAGGGGGTTATaGAAACAGGAGGGGACGTCAGTCCTGCTATGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LKFCMYNTVRGL*KQEGTSVLLWS Trigger: ACTCCATAGCAGGACTGACGTCCCCTCCTGTTTGCATAACCCCCTTACTGTATTGTACATACAGAATTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR CCA 72 bp | CTTTGGGAAAACTACTTGCCCATAGATCCCAAACACTaGACATCACAACTGCCTATGGCTAAACTGTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LWENYLPIDPKH*TSQLPMAKLCS Trigger: TGAACACAGTTTAGCCATAGGCAGTTGTGATGTCCAGTGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAAGAGGCGAGCCACCAGAGAGGCCCGGTGTGGCAGGAGGGCTCATTTCCACTCAGGCTGGAGCTaGTCAGCGAGCGGAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEKRRATREARCGRRAHFHSGWS*SASGGS Trigger: GCTCCCTCCGCTCGCTGAGCAGCTCCAGCCTGAGTG...GAAATGAGCCCTCCTGCCACACCGGGCCTCTCTGGTGGCTCGCCTCTTTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCAGCTCCACCCTAGCTGTGGAAGAAACACGGGGAAAGGGCATGCGGCCGCAGAGCACTCAGGCTaGAGCTGCTCAGCGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQLHPSCGRNTGKGHAAAEHSG*SCSASG Trigger: TCCGCTCGCTGAGCAGCTCCAGCCTGAGTGCTCTGC...GGCCGCATGCCCTTTCCCCGTGTTTCTTCCACAGCTAGGGTGGAGCTGGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGCCCGCCCTAGTGCAAAAAGACTGAGAGCCGCGCTGACAGCCCCGGGACCTGCCTCCGGTAGGTaGCCCTGGGTTCTGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSARPSAKRLRAALTAPGPASGR*PWVLNP Trigger: CGGATTCAGAACCCAGGGCCACCTACCGGAGGCAGG...TCCCGGGGCTGTCAGCGCGGCTCTCAGTCTTTTTGCACTAGGGCGGGCAGAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | TGGAATGCAGAGCTGGAGCTCTCAGGAAAGGGCCAGGCCTTGCCAGGTCTGAGGTGCTGGGGAAAGCGCTaGGCTTGGAGGCCGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WNAELELSGKGQALPGLRCWGKR*AWRPKD Trigger: GTCCTTCGGCCTCCAAGCCCAGCGCTTTCCCCAGCA...CCTCAGACCTGGCAAGGCCTGGCCCTTTCCTGAGAGCTCCAGCTCTGCATTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCAGCTCCACCCTAGCTGTGGAAGAAACACGGGGAAAGGGCATGCGGCCGGCCAGTGTAGGTCTTaGTGCTGCGGAACTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQLHPSCGRNTGKGHAAGQCRS*CCGTPS Trigger: AGAAGGAGTTCCGCAGCATCAAGACCTACACTGGCC...GGCCGCATGCCCTTTCCCCGTGTTTCTTCCACAGCTAGGGTGGAGCTGGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAAGAGGCGAGCCACCAGAGAGGCCCGGTGTGGCAGGAGGGCTCATTTCTGGATGCCCAGCATCTaGTCACACTCGACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QEKRRATREARCGRRAHFWMPSI*SHSTLA Trigger: GGCCAAGGTCGAGTGTGAGCAGATGCTGGGCATCCA...GAAATGAGCCCTCCTGCCACACCGGGCCTCTCTGGTGGCTCGCCTCTTTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAAGAGGCGAGCCACCAGAGAGGCCCGGTGTGGCAGGAGGGCTCATTTCGGGTGGTGTCCACTTTaGCCTCATGGAACTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: QEKRRATREARCGRRAHFGWCPL*PHGTAR Trigger: ACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCC...GAAATGAGCCCTCCTGCCACACCGGGCCTCTCTGGTGGCTCGCCTCTTTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGCCCGCCCTAGTGCAAAAAGACTGAGAGCCGCGCTGACAGCCCCGGGATCCACTTTGCCCTCATaGAACTGCACGTACTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TSARPSAKRLRAALTAPGSTLPS*NCTYFR Trigger: CCGGAAGTACGTGCAGTTCCATGAGGGCAAAGTGGA...TCCCGGGGCTGTCAGCGCGGCTCTCAGTCTTTTTGCACTAGGGCGGGCAGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGCTCATTTCACAAGCCAGCAGGCCTCTAGCTCACCACTCCTGGTGGGGGACAGGCCGCAGTTTTaGCACTTGGAGAGGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRAHFTSQQASSSPLLVGDRPQF*HLERAD Trigger: GTCTGCCCTCTCCAAGTGCCAAAACTGCGGCCTGTC...CCCCACCAGGAGTGGTGAGCTAGAGGCCTGCTGGCTTGTGAAATGAGCCCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | TGGGGATTTGAAGGTGACCCCAAAGGCTCCTTCCCAGTCCAAGCTGGCTTTGCAAGCCGGTCAAGGCCCTaGGTCTGGTGGCCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: WGFEGDPKGSFPVQAGFASRSRP*VWWPTY Trigger: GTATGTGGGCCACCAGACTCAGGGCCTTGACCGGCT...TGCAAAGCCAGCTTGGACTGGGAAGGAGCCTTTGGGGTCACCTTCAAATCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | AGATGGGGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCAAGAGGGCTTGGGCTTTaGGTGGACAGGTGCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RWGWRHPPPELPSEIQGSRGLGL*VDRCQP Trigger: CGGCTGGCACCTGTCCACTCAAAGCCCAAGCCCTCT...TGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCCCCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAGTGGAGAGGGCAGCGAAGTGACTGAATGGAAGTGCCATCCTGTCCTTTGCCAGGCTGCTGGTTaGCGGGGGTGGTGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGEGSEVTEWKCHPVLCQAAG*RGWCPL Trigger: AAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCA...AAGGACAGGATGGCACTTCCATTCAGTCACTTCGCTGCCCTCTCCACTTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | CCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCCCATCTTGTCACTGAGGTCAGGCAGAGGGAGGAGCTaGAGGACAGGCCGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PDRAIDVGAEVPILSLRSGRGRS*RTGRSF Trigger: AAAACTGCGGCCTGTCCTGCAGCTCCTCCCTCTGCC...TGACCTCAGTGACAAGATGGGGACCTCAGCCCCCACGTCTATAGCTCTGTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | CCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCCCATCTTGTCACTGAGGTCAGGAAAGCGCTGGGCTTaGAGGCCGAAGGACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PDRAIDVGAEVPILSLRSGKRWA*RPKDRP Trigger: TGGTCTGTCCTTCGGCCTCCAAGCCCAGCGCTTTCC...TGACCTCAGTGACAAGATGGGGACCTCAGCCCCCACGTCTATAGCTCTGTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCAGGGTACCGCATAGGTGCCCCGTaGGCCAAGCTGTCGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GWRHPPPELPSEIQGSGYRIGAP*AKLSCT Trigger: TGTACACGACAGCTTGGCCCACGGGGCACCTATGCG...GTACCCTGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | GGCTCCCAGCTCCACCCTAGCTGTGGAAGAAACACGGGGAAAGGGCATGCGGCCTTGCCCTCATGGAACTaGACGTACTTCCGGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSQLHPSCGRNTGKGHAALPSWN*TYFRNK Trigger: CTTATTCCGGAAGTACGTGCAGTTCCATGAGGGCAA...GGCCGCATGCCCTTTCCCCGTGTTTCTTCCACAGCTAGGGTGGAGCTGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | TGGGGATTTGAAGGTGACCCCAAAGGCTCCTTCCCAGTCCAAGCTGGCTTTGCAGCTGGTTGCCGGGGGTaGTGTCCACTTTGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGFEGDPKGSFPVQAGFAAGCRG*CPLCPH Trigger: ATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGC...TGCAAAGCCAGCTTGGACTGGGAAGGAGCCTTTGGGGTCACCTTCAAATCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | CATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGGGGGCTGAGGTCTGGCTGCTCGCTCACTaGCTGATTTCTGGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HAQQAPRPDRAIDVGAEVWLLAH*LISGVP Trigger: TGGCACTCCAGAAATCAGCCAGTGAGCGAGCAGCCA...GACCTCAGCCCCCACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | AGATGGGGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCAAGGCATCCACAGACCTaGAGGGTTTGGTCACCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWGWRHPPPELPSEIQGSRHPQT*RVWSPG Trigger: CCCGGGTGACCAAACCCTCCAGGTCTGTGGATGCCT...TGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCCCCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | AGATGGGGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCACACCACGTCCAGCTCTaGGTAGCCCTTGTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RWGWRHPPPELPSEIQGSHHVQL*VALVLH Trigger: GTGAAGGACAAGGGCTACTCAGAGCTGGACGTGGTG...TGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCCCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGGGGTGGGGACATCTGCCTAGGGATCCTTGTATCAAGGGAGCAGGAAGGTGGCCCTGGGTTCTaGATCCGTATACAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTRGGDICLGILVSREQEGGPGF*IRIQVH Trigger: GTGGACCTGTATACGGATTCAGAACCCAGGGCCACC...TTCCTGCTCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCACCCCTTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCACGGTCAAGCTCAAGTCTCTGCTTCCTTCCGGTGCAGCTCTGTTCCCTTGAAGGGGGCTTCCTaGTCTCCCAGTAGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CFHGQAQVSASFRCSSVPLKGAS*SPSSCR Trigger: ACGACAGCTACTGGGAGAGCAGGAAGCCCCCTTCAA...GGGAACAGAGCTGCACCGGAAGGAAGCAGAGACTTGAGCTTGACCGTGGAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCCTGCTATGGAGTCCACTTTCCAACTGCCAAGCAGAGCTTGCCAACATTGGCCAGGGGCTCCTTaGGCAGACTCAGTGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPAMESTFQLPSRACQHWPGAP*ADSVRP Trigger: AGGCCTCACTGAGTCTGCGCAAGGAGCCCCTGGCCA...ATGTTGGCAAGCTCTGCTTGGCAGTTGGAAAGTGGACTCCATAGCAGGACTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | TGGGGACATCTGCCTAGGGATCCTTGTATCAAGGGAGCAGGAAAAGAGGCGAGCCGTGTACAGAAGCCTTaGTGGGGAAAGCGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGHLPRDPCIKGAGKEASRVQKP*WGKRWA Trigger: AGCCCAGCGCTTTCCCCAGCAAGGCTTCTGTACACG...GCTCGCCTCTTTTCCTGCTCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | GGGTACAAGATTCATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGCTTCTCCCGCATAGGTaGCCCGTGGGCCAAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYKIHAQQAPRPDRAIDVLLPHR*PVGQAV Trigger: GACAGCTTGGCCCACGGGGCACCTATGCGGGAGAAG...CACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATGAATCTTGTACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | AGATGGGGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCACAGACCTGGAGGGTTTaGTCACCCGGGGCTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWGWRHPPPELPSEIQGSQTWRV*SPGACS Trigger: ACTACAAGCCCCGGGTGACCAAACCCTCCAGGTCTG...TGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCCCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | GTGCTGACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCTTGTCTCCAGCATGCTaGAGGCGCAGTGCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSKSCPGRPVSGIKLPLSPAC*RRSAEH Trigger: GTGCTCTGCACTGCGCCTTCAGCATGCTGGAGACAA...GGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGTCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCACGGTCAAGCTCAAGTCTCTGCTTCCTTCCGGTGCAGCTCTGTTCCCGAAGGCCAAGGCCATTaGTGGAGGAGATGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFHGQAQVSASFRCSSVPEGQGH*WRRWRK Trigger: TTTCCTCCATCTCCTCCATCAATGGCCTTGGCCTTC...GGGAACAGAGCTGCACCGGAAGGAAGCAGAGACTTGAGCTTGACCGTGGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGGGGTGGGGACATCTGCCTAGGGATCCTTGTATCAAGGGAGCAGGAATCACCTGCGAGTGGATaGCCAGCATCTGCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: QTRGGDICLGILVSREQESPASG*PASAHT Trigger: AGTGTGAGCAGATGCTGGGCATCCACTCGCAGGTGA...TTCCTGCTCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCACCCCTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | AGAGACTTATTTCAAGGGAACCAGAACCAGAACCCAAACCCATACCAGCTGAGCCCTCCGTGCTGCCCTTaGGCTCAGCCACCACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDLFQGNQNQNPNPYQLSPPCCP*AQPPRP Trigger: TGGACGTGGTGGCTGAGCGCAAGGGCAGCACGGAGG...GCTCAGCTGGTATGGGTTTGGGTTCTGGTTCTGGTTCCCTTGAAATAAGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGGGGTGGGGACATCTGCCTAGGGATCCTTGTATCAAGGGAGCAGGAAGCAGCTCACTCTTTCTaGAGCACGGGTCGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTRGGDICLGILVSREQEAAHSF*STGRSG Trigger: ACCACTACGACCCGTGCTGCAGAAAGAGTGAGCTGC...TTCCTGCTCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCACCCCTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | CACACAGCAGCCACTGGCTGGAATGTGACCTGCTACGGGAGCCATGTGACAAAGGAGACCATCTTCACCTaGAGGGACTCCACAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTAATGWNVTCYGSHVTKETIFT*RDSTSS Trigger: AGAGCTTGTGGAGTCCCTCCAGGTGAAGATGGTCTC...CTTTGTCACATGGCTCCCGTAGCAGGTCACATTCCAGCCAGTGGCTGCTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCGGCTTGGGCTTTGAGTaGACAGGTGCCAGCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVGLGFE*TGASRS Trigger: TGACCGGCTGGCACCTGTCCACTCAAAGCCCAAGCC...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | TGGGGATTTGAAGGTGACCCCAAAGGCTCCTTCCCAGTCCAAGCTGGCTTTGCATATCTGTACACGAGCTaGGAGAACGGGGCGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: WGFEGDPKGSFPVQAGFAYLYTS*ENGADL Trigger: CAAGTCCGCCCCGTTCTCCCAGCTCGTGTACAGATA...TGCAAAGCCAGCTTGGACTGGGAAGGAGCCTTTGGGGTCACCTTCAAATCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCACGGTCAAGCTCAAGTCTCTGCTTCCTTCCGGTGCAGCTCTGTTCCCCCAGCAACGTGGACTTaGCATAGTAAACAAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFHGQAQVSASFRCSSVPPATWT*HSKQKG Trigger: GCCCTTTTGTTTACTATGTCAAGTCCACGTTGCTGG...GGGAACAGAGCTGCACCGGAAGGAAGCAGAGACTTGAGCTTGACCGTGGAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | GCTCTGTTCCCTCTTGATGGGACCAAGCCAGGTCAGTGGTGTGTAGCCCTTGTATTGGGCAGGAACTTGTaGAGCTCACTCTTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALFPLDGTKPGQWCVALVLGRNL*SSLFLQ Trigger: CTGCAGAAAGAGTGAGCTGCACAAGTTCCTGCCCAA...TACAAGGGCTACACACCACTGACCTGGCTTGGTCCCATCAAGAGGGAACAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS-3UTR CCA 90 bp | GGGTACAAGATTCATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGGCTTGTAGTAGTCCTTaGCTGCTCGCTCACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GYKIHAQQAPRPDRAIDVACSSP*LLAHWL Trigger: CAGCCAGTGAGCGAGCAGCCAAGGACTACTACAAGC...CACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATGAATCTTGTACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | CCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCCCATCTTGTCACTGAGGTCAAGGTCCACGTCATCCTaGGTGGAAAAGTATGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: PDRAIDVGAEVPILSLRSRSTSS*VEKYVL Trigger: TAGTACATACTTTTCCACTCAGGATGACGTGGACCT...TGACCTCAGTGACAAGATGGGGACCTCAGCCCCCACGTCTATAGCTCTGTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS-3UTR TCA 90 bp | CAGACAAGGGGTGGGGACATCTGCCTAGGGATCCTTGTATCAAGGGAGCAGGAAGTCACAGGAAACTTTTaGACACTGGGTGCACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTRGGDICLGILVSREQEVTGNF*TLGARV Trigger: AACACGTGCACCCAGTGTTCAAAAGTTTCCTGTGAC...TTCCTGCTCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCACCCCTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS-3UTR GCA 90 bp | CTAAACTGTGTTCACACTTCACAAGGAAGTGACAGCTTCAAATTCCTGCCCTGCAAAGGGTCCACCTTGTaGAGGCTGAGCAGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNCVHTSQGSDSFKFLPCKGSTL*RLSRVA Trigger: TGCCACCCTGCTCAGCCTGCACAAGGTGGACCCTTT...GCAGGGCAGGAATTTGAAGCTGTCACTTCCTTGTGAAGTGTGAACACAGTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR GCA 90 bp | CTAAACTGTGTTCACACTTCACAAGGAAGTGACAGCTTCAAATTCCTGCCCTGCCCCTTGTCCTTCACCTaGGAGTGGATGCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LNCVHTSQGSDSFKFLPCPLSFT*EWMPSI Trigger: GATGCTGGGCATCCACTCGCAGGTGAAGGACAAGGG...GCAGGGCAGGAATTTGAAGCTGTCACTTCCTTGTGAAGTGTGAACACAGTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | CTAAACTGTGTTCACACTTCACAAGGAAGTGACAGCTTCAAATTCCTGCCCTGCGTACAGAAGCCTTGCTaGGGAAAGCGCTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNCVHTSQGSDSFKFLPCVQKPC*GKRWAW Trigger: CCAAGCCCAGCGCTTTCCCCAGCAAGGCTTCTGTAC...GCAGGGCAGGAATTTGAAGCTGTCACTTCCTTGTGAAGTGTGAACACAGTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | ACTGAATGCCTGCTTTGGGAAAACTACTTGCCCATAGATCCCAAACACTGGACAACTGGGTGCACGTGTTaGTGGCACCTGCACGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TECLLWENYLPIDPKHWTTGCTC*WHLHGY Trigger: GTAACCGTGCAGGTGCCACCAACACGTGCACCCAGT...TGTCCAGTGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR TCA 90 bp | ACTGAATGCCTGCTTTGGGAAAACTACTTGCCCATAGATCCCAAACACTGGACAAGGGGGATGGGCGGATaGTCTCGTCCTTCAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TECLLWENYLPIDPKHWTRGMGG*SRPSSL Trigger: AAGACTTGAAGGACGAGATCATCCGCCCATCCCCCT...TGTCCAGTGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | ACTGAATGCCTGCTTTGGGAAAACTACTTGCCCATAGATCCCAAACACTGGACAGCTCACACTCGACCTTaGCCAGGAAGAGCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TECLLWENYLPIDPKHWTAHTRP*PGRAQR Trigger: CCTTTGAGCTCTTCCTGGCCAAGGTCGAGTGTGAGC...TGTCCAGTGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | GCAGGAAGTGGAGAGGGCAGCGAAGTGACTGAATGGAAGTGCCATCCTGTCCTTCCACGTCATCCTGAGTaGAAAAGTATGTACTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSGEGSEVTEWKCHPVLPRHPE*KSMYYE Trigger: TTCGTAGTACATACTTTTCCACTCAGGATGACGTGG...AAGGACAGGATGGCACTTCCATTCAGTCACTTCGCTGCCCTCTCCACTTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | AGAGACTTATTTCAAGGGAACCAGAACCAGAACCCAAACCCATACCAGCTGAGCCGCAGTTTTGGCACTTaGAGAGGGCAGACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLFQGNQNQNPNPYQLSRSFGT*RGQTLW Trigger: CCAAAGAGTCTGCCCTCTCCAAGTGCCAAAACTGCG...GCTCAGCTGGTATGGGTTTGGGTTCTGGTTCTGGTTCCCTTGAAATAAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CCA 90 bp | CTAAACTGTGTTCACACTTCACAAGGAAGTGACAGCTTCAAATTCCTGCCCTGCTCCGGTAGGTGGCCCTaGGTTCTGAATCCGTATACA | + |
|
Preference number: 4 (lower is better) Translates to: LNCVHTSQGSDSFKFLPCSGRWP*VLNPYT Trigger: TGTATACGGATTCAGAACCCAGGGCCACCTACCGGA...GCAGGGCAGGAATTTGAAGCTGTCACTTCCTTGTGAAGTGTGAACACAGTTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS-3UTR CCA 90 bp | AGAGACTTATTTCAAGGGAACCAGAACCAGAACCCAAACCCATACCAGCTGAGCGAAACTTTTGAACACTaGGTGCACGTGTTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDLFQGNQNQNPNPYQLSETFEH*VHVLVA Trigger: TGCCACCAACACGTGCACCCAGTGTTCAAAAGTTTC...GCTCAGCTGGTATGGGTTTGGGTTCTGGTTCTGGTTCCCTTGAAATAAGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| 3UTR CAA 72 bp | TGCTCCAGAACTGAATGCCTGCTTTGGGAAAACTACTaGCCCATAGATCCCAAACACTGGACATCACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: CSRTECLLWENY*PIDPKHWTSQL Trigger: CAGTTGTGATGTCCAGTGTTTGGGATCTATGGGCAAGTAGTTTTCCCAAAGCAGGCATTCAGTTCTGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS TCA 90 bp | AGTGGTCAGGTGCTCCCGACTCTCAGCCCGCCTCCGCAGAGCATCTaGGCACCCGCGCGCATCCTCCGTGCTGCCCTTGCGCTCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGQVLPTLSPPPQSI*APARILRAALALSH Trigger: GTGGCTGAGCGCAAGGGCAGCACGGAGGATGCGCGCGGGTGCTCAGATGCTCTGCGGAGGCGGGCTGAGAGTCGGGAGCACCTGACCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 90 bp | CCCGCCTCCGCAGAGCATCTGAGCACCCGCGCGCATCCTCCGTGCTaGCCTTGCGCTCAGCCACCACGTCCAGCTCTGAGTAGCCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PASAEHLSTRAHPPC*PCAQPPRPALSSPC Trigger: ACAAGGGCTACTCAGAGCTGGACGTGGTGGCTGAGCGCAAGGGCAGCACGGAGGATGCGCGCGGGTGCTCAGATGCTCTGCGGAGGCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS-3UTR CAA 90 bp | GGCTCCCAGCTCCACCCTAGCTGTGGAAGAAACACGGGGAAAGGGCATGCGGCCTCCTCCGTGCTGCCCTaGCGCTCAGCCACCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSQLHPSCGRNTGKGHAASSVLP*RSATTS Trigger: GGACGTGGTGGCTGAGCGCAAGGGCAGCACGGAGGA...GGCCGCATGCCCTTTCCCCGTGTTTCTTCCACAGCTAGGGTGGAGCTGGGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS GCA 90 bp | AGCAGGGTGGCAGCTGCCACGCGCAGGTACTCATCGCTGCCAGGCTaGTGGTTGCCGGGGGTGGTGTCCACTTTGCCCTCATGGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRVAAATRRYSSLPG*WLPGVVSTLPSWNC Trigger: GCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGGCAGCTGCCACCCTGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CCA 90 bp | AGGGTGGCAGCTGCCACGCGCAGGTACTCATCGCTGCCAGGCTGCTaGTTGCCGGGGGTGGTGTCCACTTTGCCCTCATGGAACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RVAAATRRYSSLPGC*LPGVVSTLPSWNCT Trigger: CGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGGCAGCTGCCACCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS TCA 90 bp | GAGGGCTTGGGCTTTGAGTGGACAGGTGCCAGCCGGTCAAGGCCCTaGGTCTGGTGGCCCACATACTTCTCCCGCATAGGTGCCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGLGFEWTGASRSRP*VWWPTYFSRIGAPW Trigger: CCACGGGGCACCTATGCGGGAGAAGTATGTGGGCCACCAGACTCAGGGCCTTGACCGGCTGGCACCTGTCCACTCAAAGCCCAAGCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS GCA 90 bp | TCCGCAGAGCATCTGAGCACCCGCGCGCATCCTCCGTGCTGCCCTTaGGCTCAGCCACCACGTCCAGCTCTGAGTAGCCCTTGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAEHLSTRAHPPCCP*AQPPRPALSSPCPS Trigger: TGAAGGACAAGGGCTACTCAGAGCTGGACGTGGTGGCTGAGCGCAAGGGCAGCACGGAGGATGCGCGCGGGTGCTCAGATGCTCTGCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS TCA 90 bp | CGCATCCTCCGTGCTGCCCTTGCGCTCAGCCACCACGTCCAGCTCTaGGTAGCCCTTGTCCTTCACCTGCGAGTGGATGCCCAGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RILRAALALSHHVQL*VALVLHLRVDAQHL Trigger: CAGATGCTGGGCATCCACTCGCAGGTGAAGGACAAGGGCTACTCAGAGCTGGACGTGGTGGCTGAGCGCAAGGGCAGCACGGAGGATGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 90 bp | TGGCAGCTGCCACGCGCAGGTACTCATCGCTGCCAGGCTGCTGGTTaGCGGGGGTGGTGTCCACTTTGCCCTCATGGAACTGCACGTACT | + |
|
Preference number: 5 (lower is better) Translates to: WQLPRAGTHRCQAAG*RGWCPLCPHGTART Trigger: AGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGGCAGCTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 90 bp | CTGGCTGATTTCTGGAGTGCCACACGAGCCATGGAAGTGGTCAGGTaGTCCCGACTCTCAGCCCGCCTCCGCAGAGCATCTGAGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: LADFWSATRAMEVVR*SRLSARLRRASEHP Trigger: CGGGTGCTCAGATGCTCTGCGGAGGCGGGCTGAGAGTCGGGAGCACCTGACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 90 bp | TGGCTGCTCGCTCACTGGCTGATTTCTGGAGTGCCACACGAGCCATaGAAGTGGTCAGGTGCTCCCGACTCTCAGCCCGCCTCCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WLLAHWLISGVPHEP*KWSGAPDSQPASAE Trigger: CTCTGCGGAGGCGGGCTGAGAGTCGGGAGCACCTGACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAGTGAGCGAGCAGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS-3UTR CAA 90 bp | CATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCTGCCAGGCTGCTGGTaGCCGGGGGTGGTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HAQQAPRPDRAIDVGAEVLPGCW*PGVVST Trigger: AGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAG...GACCTCAGCCCCCACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS CCA 90 bp | CTCGCTCACTGGCTGATTTCTGGAGTGCCACACGAGCCATGGAAGTaGTCAGGTGCTCCCGACTCTCAGCCCGCCTCCGCAGAGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAHWLISGVPHEPWK*SGAPDSQPASAEHL Trigger: CAGATGCTCTGCGGAGGCGGGCTGAGAGTCGGGAGCACCTGACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAGTGAGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 90 bp | GTCAAGGCCCTGAGTCTGGTGGCCCACATACTTCTCCCGCATAGGTaGCCCGTGGGCCAAGCTGTCGTGTACAGAAGCCTTGCTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VKALSLVAHILLPHR*PVGQAVVYRSLAGE Trigger: TTCCCCAGCAAGGCTTCTGTACACGACAGCTTGGCCCACGGGGCACCTATGCGGGAGAAGTATGTGGGCCACCAGACTCAGGGCCTTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS CCA 90 bp | CCACGCGCAGGTACTCATCGCTGCCAGGCTGCTGGTTGCCGGGGGTaGTGTCCACTTTGCCCTCATGGAACTGCACGTACTTCCGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: PRAGTHRCQAAGCRG*CPLCPHGTARTSGI Trigger: TATTCCGGAAGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 90 bp | GGGGCTTCCTGCTCTCCCAGTAGCTGTCGTAGGCATCCACAGACCTaGAGGGTTTGGTCACCCGGGGCTTGTAGTAGTCCTTGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GASCSPSSCRRHPQT*RVWSPGACSSPWLL Trigger: GAGCAGCCAAGGACTACTACAAGCCCCGGGTGACCAAACCCTCCAGGTCTGTGGATGCCTACGACAGCTACTGGGAGAGCAGGAAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS-3UTR CAA 90 bp | CAGGAAAAGAGGCGAGCCACCAGAGAGGCCCGGTGTGGCAGGAGGGCTCATTTCGCTGTGGTAGAGGGCTaGGGCTTTGAGTGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QEKRRATREARCGRRAHFAVVEG*GFEWTG Trigger: ACCTGTCCACTCAAAGCCCAAGCCCTCTACCACAGC...GAAATGAGCCCTCCTGCCACACCGGGCCTCTCTGGTGGCTCGCCTCTTTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS TCA 90 bp | GGTCACCCGGGGCTTGTAGTAGTCCTTGGCTGCTCGCTCACTGGCTaGTTTCTGGAGTGCCACACGAGCCATGGAAGTGGTCAGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHPGLVVVLGCSLTG*FLECHTSHGSGQVL Trigger: GAGCACCTGACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAGTGAGCGAGCAGCCAAGGACTACTACAAGCCCCGGGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 90 bp | AAGGACAGACCAGCACACTGTCACAGCGCTGGCAGAGGGAGGAGCTaGAGGACAGGCCGCAGTTTTGGCACTTGGAGAGGGCAGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KDRPAHCHSAGRGRS*RTGRSFGTWRGQTL Trigger: AAGAGTCTGCCCTCTCCAAGTGCCAAAACTGCGGCCTGTCCTGCAGCTCCTCCCTCTGCCAGCGCTGTGACAGTGTGCTGGTCTGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 90 bp | TGCTCTCCCAGTAGCTGTCGTAGGCATCCACAGACCTGGAGGGTTTaGTCACCCGGGGCTTGTAGTAGTCCTTGGCTGCTCGCTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSPSSCRRHPQTWRV*SPGACSSPWLLAHW Trigger: CCAGTGAGCGAGCAGCCAAGGACTACTACAAGCCCCGGGTGACCAAACCCTCCAGGTCTGTGGATGCCTACGACAGCTACTGGGAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 90 bp | GCCACACATCGGGCCGCAGAGCATCCTGCCTCCGGTAGGTGGCCCTaGGTTCTGAATCCGTATACAGGTCCACGTCATCCTGAGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ATHRAAEHPASGRWP*VLNPYTGPRHPEWK Trigger: TTTCCACTCAGGATGACGTGGACCTGTATACGGATTCAGAACCCAGGGCCACCTACCGGAGGCAGGATGCTCTGCGGCCCGATGTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS-3UTR CAA 90 bp | AGATGGGGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCAGGGAAAGCGCTGGGCTaGGAGGCCGAAGGACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RWGWRHPPPELPSEIQGSGKALG*EAEGQT Trigger: GGTCTGTCCTTCGGCCTCCAAGCCCAGCGCTTTCCC...TGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCCCCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS TCA 90 bp | ACTGGATCAGCCGAAATCGATATAAAGGGTCCACCTTGTGCAGGCTaGGCAGGGTGGCAGCTGCCACGCGCAGGTACTCATCGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGSAEIDIKGPPCAG*AGWQLPRAGTHRCQ Trigger: CTGGCAGCGATGAGTACCTGCGCGTGGCAGCTGCCACCCTGCTCAGCCTGCACAAGGTGGACCCTTTATATCGATTTCGGCTGATCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 90 bp | CCACGTCCAGCTCTGAGTAGCCCTTGTCCTTCACCTGCGAGTGGATaGCCAGCATCTGCTCACACTCGACCTTGGCCAGGAAGAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PRPALSSPCPSPASG*PASAHTRPWPGRAQ Trigger: TTGAGCTCTTCCTGGCCAAGGTCGAGTGTGAGCAGATGCTGGGCATCCACTCGCAGGTGAAGGACAAGGGCTACTCAGAGCTGGACGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAAGAGGCGAGCCACCAGAGAGGCCCGGTGTGGCAGGAGGGCTCATTTCAGAAGGCCAAGGCCATaGATGGAGGAGATGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QEKRRATREARCGRRAHFRRPRP*MEEMEE Trigger: TTCCTCCATCTCCTCCATCAATGGCCTTGGCCTTCT...GAAATGAGCCCTCCTGCCACACCGGGCCTCTCTGGTGGCTCGCCTCTTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS CCA 90 bp | CCTTCACCTGCGAGTGGATGCCCAGCATCTGCTCACACTCGACCTTaGCCAGGAAGAGCTCAAAGGAGACCATCTTCACCTGGAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PSPASGCPASAHTRP*PGRAQRRPSSPGGT Trigger: AGTCCCTCCAGGTGAAGATGGTCTCCTTTGAGCTCTTCCTGGCCAAGGTCGAGTGTGAGCAGATGCTGGGCATCCACTCGCAGGTGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CCA 90 bp | GTTTGGTCACCCGGGGCTTGTAGTAGTCCTTGGCTGCTCGCTCACTaGCTGATTTCTGGAGTGCCACACGAGCCATGGAAGTGGTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VWSPGACSSPWLLAH*LISGVPHEPWKWSG Trigger: ACCTGACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAGTGAGCGAGCAGCCAAGGACTACTACAAGCCCCGGGTGACCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAGGCACCCACCGCCTGAACTTCCTTCTGAGATTCAAGGTTCAGGGTACGACTCAGTGAGGCCTTaGAAGGGGGCTTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GWRHPPPELPSEIQGSGYDSVRP*KGASCS Trigger: AGAGCAGGAAGCCCCCTTCAAAGGCCTCACTGAGTC...GTACCCTGAACCTTGAATCTCAGAAGGAAGTTCAGGCGGTGGGTGCCTCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CAA 90 bp | TGGGGACATCTGCCTAGGGATCCTTGTATCAAGGGAGCAGGAAAAGAGGCGAGCTCGTGTACAGAAGCCTaGCTGGGGAAAGCGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WGHLPRDPCIKGAGKEASSCTEA*LGKALG Trigger: GCCCAGCGCTTTCCCCAGCAAGGCTTCTGTACACGA...GCTCGCCTCTTTTCCTGCTCCCTTGATACAAGGATCCCTAGGCAGATGTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS TCA 90 bp | ATCGGGCCGCAGAGCATCCTGCCTCCGGTAGGTGGCCCTGGGTTCTaGATCCGTATACAGGTCCACGTCATCCTGAGTGGAAAAGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: IGPQSILPPVGGPGF*IRIQVHVILSGKVC Trigger: ACATACTTTTCCACTCAGGATGACGTGGACCTGTATACGGATTCAGAACCCAGGGCCACCTACCGGAGGCAGGATGCTCTGCGGCCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS GCA 90 bp | ACTCATCGCTGCCAGGCTGCTGGTTGCCGGGGGTGGTGTCCACTTTaGCCTCATGGAACTGCACGTACTTCCGGAATAAGTCATCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: THRCQAAGCRGWCPL*PHGTARTSGISHPC Trigger: ACAAGGATGACTTATTCCGGAAGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGTCCTGCTATGGAGTCCACTTTCCAACTGCCAAGCAGAGCTTGCCAACATGGGGTGGTGTCCACTTaGCCCTCATGGAACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VSPAMESTFQLPSRACQHGVVST*PSWNCT Trigger: CGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCC...ATGTTGGCAAGCTCTGCTTGGCAGTTGGAAAGTGGACTCCATAGCAGGACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CAA 90 bp | GCTCTGTTCCCTCTTGATGGGACCAAGCCAGGTCAGTGGTGTGTAGCCCTTGTAGGGTGGGTATCATTTTaGACCAGCCACACATCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALFPLDGTKPGQWCVALVGWVSF*TSHTSG Trigger: GCCCGATGTGTGGCTGGTCAAAAATGATACCCACCC...TACAAGGGCTACACACCACTGACCTGGCTTGGTCCCATCAAGAGGGAACAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CAA 90 bp | GTCAGTCCTGCTATGGAGTCCACTTTCCAACTGCCAAGCAGAGCTTGCCAACATGGACAGGCCGCAGTTTaGGCACTTGGAGAGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSPAMESTFQLPSRACQHGQAAV*ALGEGR Trigger: TCTGCCCTCTCCAAGTGCCAAAACTGCGGCCTGTCC...ATGTTGGCAAGCTCTGCTTGGCAGTTGGAAAGTGGACTCCATAGCAGGACTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CAA 90 bp | CATGCTCAGCAGGCACCAAGACCAGACAGAGCTATAGACGTGGGGGCTGAGGTCCGTCACAGGAAACTTTaGAACACTGGGTGCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HAQQAPRPDRAIDVGAEVRHRKL*NTGCTC Trigger: ACACGTGCACCCAGTGTTCAAAAGTTTCCTGTGACG...GACCTCAGCCCCCACGTCTATAGCTCTGTCTGGTCTTGGTGCCTGCTGAGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CAA 90 bp | AGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCTGCTGTATGTATAAAGGGTCCACCTaGTGCAGGCTGAGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCPGRPVSGIKLPRVCCMYKGST*CRLSRV Trigger: CACCCTGCTCAGCCTGCACAAGGTGGACCCTTTATA...CATACAGCAGACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CAA 90 bp | GTGCTGACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCCCGCAGTTTTGGCACTaGGAGAGGGCAGACTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLTSKSCPGRPVSGIKLPPQFWH*ERADSL Trigger: CAAAGAGTCTGCCCTCTCCAAGTGCCAAAACTGCGG...GGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGTCAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS CCA 90 bp | CACTCGACCTTGGCCAGGAAGAGCTCAAAGGAGACCATCTTCACCTaGAGGGACTCCACAAGCTCTTTGAGTTTGTACACAGTCCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSTLARKSSKETIFT*RDSTSSLSLYTVPN Trigger: GTTGGGGACTGTGTACAAACTCAAAGAGCTTGTGGAGTCCCTCCAGGTGAAGATGGTCTCCTTTGAGCTCTTCCTGGCCAAGGTCGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS-3UTR CAA 90 bp | ACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCAGAGTCTGCTCACACTCGACCTaGGCCAGGAAGAGCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSKSCPGRPVSGIKLPRVCSHST*ARKSSK Trigger: CTTTGAGCTCTTCCTGGCCAAGGTCGAGTGTGAGCA...GACTCTGGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS-3UTR CAA 90 bp | GTGCTGACATCAAAGAGCTGCCCAGGAAGGCCAGTCTCAGGAATAAAACTGCCCGACTCCACAAGCTCTTaGAGTTTGTACACAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLTSKSCPGRPVSGIKLPDSTSS*SLYTVP Trigger: GGGGACTGTGTACAAACTCAAAGAGCTTGTGGAGTC...GGGCAGTTTTATTCCTGAGACTGGCCTTCCTGGGCAGCTCTTTGATGTCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS TCA 72 bp | GTGCTCCCGACTCTCAGCCCGCCTCCGCAGAGCATCTaGGCACCCGCGCGCATCCTCCGTGCTGCCCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VLPTLSPPPQSI*APARILRAALA Trigger: CGCAAGGGCAGCACGGAGGATGCGCGCGGGTGCTCAGATGCTCTGCGGAGGCGGGCTGAGAGTCGGGAGCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS GCA 72 bp | GCAGGGTGGCAGCTGCCACGCGCAGGTACTCATCGCTaGCAGGCTGCTGGTTGCCGGGGGTGGTGTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: AGWQLPRAGTHR*QAAGCRGWCPL Trigger: AAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGGCAGCTGCCACCCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS GCA 72 bp | TCCGCAGAGCATCTGAGCACCCGCGCGCATCCTCCGTaGTGCCCTTGCGCTCAGCCACCACGTCCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAEHLSTRAHPP*CPCAQPPRPAL Trigger: CAGAGCTGGACGTGGTGGCTGAGCGCAAGGGCAGCACGGAGGATGCGCGCGGGTGCTCAGATGCTCTGCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS GCA 72 bp | AGGGTCCACCTTGTGCAGGCTGAGCAGGGTGGCAGCTaGCACGCGCAGGTACTCATCGCTGCCAGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVHLVQAEQGGS*HAQVLIAARLL Trigger: CAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGGCAGCTGCCACCCTGCTCAGCCTGCACAAGGTGGACCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS GCA 72 bp | CATCTGAGCACCCGCGCGCATCCTCCGTGCTGCCCTTaGGCTCAGCCACCACGTCCAGCTCTGAGTAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLSTRAHPPCCP*AQPPRPALSSP Trigger: AGGGCTACTCAGAGCTGGACGTGGTGGCTGAGCGCAAGGGCAGCACGGAGGATGCGCGCGGGTGCTCAGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CCA 72 bp | GCTGCCACGCGCAGGTACTCATCGCTGCCAGGCTGCTaGTTGCCGGGGGTGGTGTCCACTTTGCCCTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: AATRRYSSLPGC*LPGVVSTLPSW Trigger: CCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 72 bp | GTGCCCCGTGGGCCAAGCTGTCGTGTACAGAAGCCTTaGTGGGGAAAGCGCTGGGCTTGGAGGCCGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPRGPSCRVQKP*WGKRWAWRPKD Trigger: GTCCTTCGGCCTCCAAGCCCAGCGCTTTCCCCAGCAAGGCTTCTGTACACGACAGCTTGGCCCACGGGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS CAA 90 bp | GTGGCAGCTGCCACGCGCAGGTACTCATCGCTGCCAGGCTGCTGGTaGCCGGGGGTGGTGTCCACTTTGCCCTCATGGAACTGCACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VAAATRRYSSLPGCW*PGVVSTLPSWNCTY Trigger: GTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGGCAGCTGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS TCA 72 bp | CGTGCTGCCCTTGCGCTCAGCCACCACGTCCAGCTCTaGGTAGCCCTTGTCCTTCACCTGCGAGTGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: RAALALSHHVQL*VALVLHLRVDA Trigger: GGCATCCACTCGCAGGTGAAGGACAAGGGCTACTCAGAGCTGGACGTGGTGGCTGAGCGCAAGGGCAGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS TCA 72 bp | ACAGCGGGAGGTGGCTGTGGTAGAGGGCTTGGGCTTTaGGTGGACAGGTGCCAGCCGGTCAAGGCCCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TAGGGCGRGLGL*VDRCQPVKALS Trigger: ACTCAGGGCCTTGACCGGCTGGCACCTGTCCACTCAAAGCCCAAGCCCTCTACCACAGCCACCTCCCGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS GCA 72 bp | CCACGCGCAGGTACTCATCGCTGCCAGGCTGCTGGTTaGCGGGGGTGGTGTCCACTTTGCCCTCATGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: PRAGTHRCQAAG*RGWCPLCPHGT Trigger: AGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACCTGCGCGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS GCA 72 bp | CCAGCACACTGTCACAGCGCTGGCAGAGGGAGGAGCTaGAGGACAGGCCGCAGTTTTGGCACTTGGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAHCHSAGRGRS*RTGRSFGTWRG Trigger: CCCTCTCCAAGTGCCAAAACTGCGGCCTGTCCTGCAGCTCCTCCCTCTGCCAGCGCTGTGACAGTGTGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CCA 72 bp | CCCCGTGGGCCAAGCTGTCGTGTACAGAAGCCTTGCTaGGGAAAGCGCTGGGCTTGGAGGCCGAAGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRGPSCRVQKPC*GKRWAWRPKDR Trigger: TCTGTCCTTCGGCCTCCAAGCCCAGCGCTTTCCCCAGCAAGGCTTCTGTACACGACAGCTTGGCCCACGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS CCA 72 bp | TGGCTGATTTCTGGAGTGCCACACGAGCCATGGAAGTaGTCAGGTGCTCCCGACTCTCAGCCCGCCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLISGVPHEPWK*SGAPDSQPASA Trigger: TGCGGAGGCGGGCTGAGAGTCGGGAGCACCTGACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 72 bp | GCTCACTGGCTGATTTCTGGAGTGCCACACGAGCCATaGAAGTGGTCAGGTGCTCCCGACTCTCAGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AHWLISGVPHEP*KWSGAPDSQPA Trigger: GGCGGGCTGAGAGTCGGGAGCACCTGACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAGTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 72 bp | CGGGCCGCAGAGCATCCTGCCTCCGGTAGGTGGCCCTaGGTTCTGAATCCGTATACAGGTCCACGTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: RAAEHPASGRWP*VLNPYTGPRHP Trigger: AGGATGACGTGGACCTGTATACGGATTCAGAACCCAGGGCCACCTACCGGAGGCAGGATGCTCTGCGGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 72 bp | TGGTGGCCCACATACTTCTCCCGCATAGGTGCCCCGTaGGCCAAGCTGTCGTGTACAGAAGCCTTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WWPTYFSRIGAP*AKLSCTEALLG Trigger: CCCCAGCAAGGCTTCTGTACACGACAGCTTGGCCCACGGGGCACCTATGCGGGAGAAGTATGTGGGCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS CAA 72 bp | TGGCCAGGGGCTCCTTGCGCAGACTCAGTGAGGCCTTaGAAGGGGGCTTCCTGCTCTCCCAGTAGCTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: WPGAPCADSVRP*KGASCSPSSCR Trigger: ACGACAGCTACTGGGAGAGCAGGAAGCCCCCTTCAAAGGCCTCACTGAGTCTGCGCAAGGAGCCCCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS TCA 72 bp | GGCTTTGAGTGGACAGGTGCCAGCCGGTCAAGGCCCTaGGTCTGGTGGCCCACATACTTCTCCCGCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GFEWTGASRSRP*VWWPTYFSRIG Trigger: ACCTATGCGGGAGAAGTATGTGGGCCACCAGACTCAGGGCCTTGACCGGCTGGCACCTGTCCACTCAAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS CCA 72 bp | GGTACTCATCGCTGCCAGGCTGCTGGTTGCCGGGGGTaGTGTCCACTTTGCCCTCATGGAACTGCACGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GTHRCQAAGCRG*CPLCPHGTART Trigger: AGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 72 bp | ACACATCGGGCCGCAGAGCATCCTGCCTCCGGTAGGTaGCCCTGGGTTCTGAATCCGTATACAGGTCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: THRAAEHPASGR*PWVLNPYTGPR Trigger: ACGTGGACCTGTATACGGATTCAGAACCCAGGGCCACCTACCGGAGGCAGGATGCTCTGCGGCCCGATGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CAA 90 bp | CTACATCCATGGCCAGGGGCTCCTTGCGCAGACTCAGTGAGGCCTTaGAAGGGGGCTTCCTGCTCTCCCAGTAGCTGTCGTAGGCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LHPWPGAPCADSVRP*KGASCSPSSCRRHP Trigger: TGGATGCCTACGACAGCTACTGGGAGAGCAGGAAGCCCCCTTCAAAGGCCTCACTGAGTCTGCGCAAGGAGCCCCTGGCCATGGATGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 72 bp | GCTCTGAGTAGCCCTTGTCCTTCACCTGCGAGTGGATaGCCAGCATCTGCTCACACTCGACCTTGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALSSPCPSPASG*PASAHTRPWPG Trigger: TCCTGGCCAAGGTCGAGTGTGAGCAGATGCTGGGCATCCACTCGCAGGTGAAGGACAAGGGCTACTCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 72 bp | CTGAGTCTGGTGGCCCACATACTTCTCCCGCATAGGTaGCCCGTGGGCCAAGCTGTCGTGTACAGAAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLVAHILLPHR*PVGQAVVYRSL Trigger: AAGGCTTCTGTACACGACAGCTTGGCCCACGGGGCACCTATGCGGGAGAAGTATGTGGGCCACCAGACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
||
| CDS CCA 72 bp | CCCGGGGCTTGTAGTAGTCCTTGGCTGCTCGCTCACTaGCTGATTTCTGGAGTGCCACACGAGCCATGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGACSSPWLLAH*LISGVPHEPWK Trigger: CTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAGTGAGCGAGCAGCCAAGGACTACTACAAGCCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 72 bp | AGCTGTCGTGTACAGAAGCCTTGCTGGGGAAAGCGCTaGGCTTGGAGGCCGAAGGACAGACCAGCACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCRVQKPCWGKR*AWRPKDRPAHC Trigger: ACAGTGTGCTGGTCTGTCCTTCGGCCTCCAAGCCCAGCGCTTTCCCCAGCAAGGCTTCTGTACACGACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057627.16 |
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| CDS CAA 72 bp | CTGCCAGGCTGCTGGTTGCCGGGGGTGGTGTCCACTTaGCCCTCATGGAACTGCACGTACTTCCGGAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPGCWLPGVVST*PSWNCTYFRNK Trigger: CTTATTCCGGAAGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CAA 90 bp | TCCTTCACCTGCGAGTGGATGCCCAGCATCTGCTCACACTCGACCTaGGCCAGGAAGAGCTCAAAGGAGACCATCTTCACCTGGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFTCEWMPSICSHST*ARKSSKETIFTWRD Trigger: GTCCCTCCAGGTGAAGATGGTCTCCTTTGAGCTCTTCCTGGCCAAGGTCGAGTGTGAGCAGATGCTGGGCATCCACTCGCAGGTGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS TCA 72 bp | CAGAGCATCCTGCCTCCGGTAGGTGGCCCTGGGTTCTaGATCCGTATACAGGTCCACGTCATCCTGAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QSILPPVGGPGF*IRIQVHVILSG Trigger: TCCACTCAGGATGACGTGGACCTGTATACGGATTCAGAACCCAGGGCCACCTACCGGAGGCAGGATGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 72 bp | TGCCAGGCTGCTGGTTGCCGGGGGTGGTGTCCACTTTaGCCTCATGGAACTGCACGTACTTCCGGAATAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CQAAGCRGWCPL*PHGTARTSGIS Trigger: ACTTATTCCGGAAGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CCA 72 bp | AGTAGCTGTCGTAGGCATCCACAGACCTGGAGGGTTTaGTCACCCGGGGCTTGTAGTAGTCCTTGGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSCRRHPQTWRV*SPGACSSPWLL Trigger: GAGCAGCCAAGGACTACTACAAGCCCCGGGTGACCAAACCCTCCAGGTCTGTGGATGCCTACGACAGCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CCA 72 bp | TGCTCTCCCAGTAGCTGTCGTAGGCATCCACAGACCTaGAGGGTTTGGTCACCCGGGGCTTGTAGTAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSPSSCRRHPQT*RVWSPGACSSP Trigger: AGGACTACTACAAGCCCCGGGTGACCAAACCCTCCAGGTCTGTGGATGCCTACGACAGCTACTGGGAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CAA 90 bp | TACTCATCGCTGCCAGGCTGCTGGTTGCCGGGGGTGGTGTCCACTTaGCCCTCATGGAACTGCACGTACTTCCGGAATAAGTCATCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: YSSLPGCWLPGVVST*PSWNCTYFRNKSSL Trigger: CAAGGATGACTTATTCCGGAAGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAACCAGCAGCCTGGCAGCGATGAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS TCA 72 bp | GGGCTTGTAGTAGTCCTTGGCTGCTCGCTCACTGGCTaGTTTCTGGAGTGCCACACGAGCCATGGAAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLVVVLGCSLTG*FLECHTSHGSG Trigger: ACCACTTCCATGGCTCGTGTGGCACTCCAGAAATCAGCCAGTGAGCGAGCAGCCAAGGACTACTACAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS TCA 72 bp | GTGAACGCTTGTGGTAGATGGGGTGGGTATCATTTTTaGCCAGCCACACATCGGGCCGCAGAGCATCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VNACGRWGGYHF*PATHRAAEHPA Trigger: GGCAGGATGCTCTGCGGCCCGATGTGTGGCTGGTCAAAAATGATACCCACCCCATCTACCACAAGCGTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CAA 72 bp | CTGCGGAACTCCTTCTTCCAGGGGAACAGGAAGAGGTaGATGGCCATTGTCTCCAGCATGCTGAAGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRNSFFQGNRKR*MAIVSSMLKAQ Trigger: CTGCGCCTTCAGCATGCTGGAGACAATGGCCATCAACCTCTTCCTGTTCCCCTGGAAGAAGGAGTTCCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CAA 72 bp | TGCGAGTGGATGCCCAGCATCTGCTCACACTCGACCTaGGCCAGGAAGAGCTCAAAGGAGACCATCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CEWMPSICSHST*ARKSSKETIFT Trigger: GGTGAAGATGGTCTCCTTTGAGCTCTTCCTGGCCAAGGTCGAGTGTGAGCAGATGCTGGGCATCCACTCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS CAA 90 bp | GTCTTGATGCTGCGGAACTCCTTCTTCCAGGGGAACAGGAAGAGGTaGATGGCCATTGTCTCCAGCATGCTGAAGGCGCAGTGCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLMLRNSFFQGNRKR*MAIVSSMLKAQCRA Trigger: TGCTCTGCACTGCGCCTTCAGCATGCTGGAGACAATGGCCATCAACCTCTTCCTGTTCCCCTGGAAGAAGGAGTTCCGCAGCATCAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS TCA 72 bp | GTTTGTACACAGTCCCCAACTCAGGCTCGTAGCCCATaGACCTTAGAATGGCTCGGATGTCCTTCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VCTQSPTQARSP*TLEWLGCPSPA Trigger: TGCTGGAGAAGGACATCCGAGCCATTCTAAGGTTCATGGGCTACGAGCCTGAGTTGGGGACTGTGTACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
||
| CDS TCA 72 bp | AGACCATCTTCACCTGGAGGGACTCCACAAGCTCTTTaGGTTTGTACACAGTCCCCAACTCAGGCTCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RPSSPGGTPQAL*VCTQSPTQARS Trigger: GCTACGAGCCTGAGTTGGGGACTGTGTACAAACTCAAAGAGCTTGTGGAGTCCCTCCAGGTGAAGATGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS GCA 72 bp | TTGCCGGGGGTGGTGTCCACTTTGCCCTCATGGAACTaGACGTACTTCCGGAATAAGTCATCCTTGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: LPGVVSTLPSWN*TYFRNKSSLYF Trigger: GAAGTACAAGGATGACTTATTCCGGAAGTACGTGCAGTTCCATGAGGGCAAAGTGGACACCACCCCCGGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS TCA 72 bp | CTGGGTTCTGAATCCGTATACAGGTCCACGTCATCCTaGGTGGAAAAGTATGTACTACGAAGAAGGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LGSESVYRSTSS*VEKYVLRRRPR Trigger: CCTTGGCCTTCTTCGTAGTACATACTTTTCCACTCAGGATGACGTGGACCTGTATACGGATTCAGAACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CAA 72 bp | GTGGAAAAGTATGTACTACGAAGAAGGCCAAGGCCATaGATGGAGGAGATGGAGGAAAGGTCATCAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: VEKYVLRRRPRP*MEEMEERSSGL Trigger: TAGCCCTGATGACCTTTCCTCCATCTCCTCCATCAATGGCCTTGGCCTTCTTCGTAGTACATACTTTTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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| CDS CCA 72 bp | GTTCTGAATCCGTATACAGGTCCACGTCATCCTGAGTaGAAAAGTATGTACTACGAAGAAGGCCAAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VLNPYTGPRHPE*KSMYYEEGQGH Trigger: ATGGCCTTGGCCTTCTTCGTAGTACATACTTTTCCACTCAGGATGACGTGGACCTGTATACGGATTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057627.16 ENSMUST00000109211.9 |
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