Pregenerated sensors for SPATA19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031991Ensembl transcript IDs: ENSMUST00000034473.7, ENSMUST00000214158.2, ENSMUST00000214287.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTCTTCTCCTTCAGGTCAAAACATaGGGTGGACACTCTTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSIVMVVTKGSAFRVSLLLQVKT*GGHSLD Trigger: GTCCAAAGAGTGTCCACCTCATGTTTTGACCTGAAG...GAGAAGAGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTGAGGTGGACACTCTTTaGACACAGGCTGTTCATCGA | + |
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Preference number: 2 (lower is better) Translates to: EVSSIVMVVTKGSAFRVSEVDTL*TQAVHR Trigger: TCGATGAACAGCCTGTGTCCAAAGAGTGTCCACCTC...AGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCCTTCAGGTCAAAACATaGGGTGGACACTCTTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: STSVRSFQHCHGGNQGLSLQVKT*GGHSLD Trigger: GTCCAAAGAGTGTCCACCTCATGTTTTGACCTGAAG...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTGAGGTGGACACTCTTTaGACACAGGCTGTTCATCGA | + |
|
Preference number: 2 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVEVDTL*TQAVHR Trigger: TCGATGAACAGCCTGTGTCCAAAGAGTGTCCACCTC...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGGTCAAAACATGAGGTaGACACTCTTTGGACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: STSVRSFQHCHGGNQGLSGQNMR*TLFGHR Trigger: CCTGTGTCCAAAGAGTGTCCACCTCATGTTTTGACC...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTCTTCAGGTCAAAACATaGGGTGGACACTCTTTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVLQVKT*GGHSLD Trigger: GTCCAAAGAGTGTCCACCTCATGTTTTGACCTGAAG...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTGGTCAAAACATGAGGTaGACACTCTTTGGACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVGQNMR*TLFGHR Trigger: CCTGTGTCCAAAGAGTGTCCACCTCATGTTTTGACC...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCCTCTCTTCTCAAGTCTaGTCACCCTTCAGGTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: STSVRSFQHCHGGNQGLSLSSQV*SPFRSK Trigger: TTTTGACCTGAAGGGTGACCAGACTTGAGAAGAGAG...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| 3UTR CCA 72 bp | CTCAAGTCTGGTCACCCTTCAGGTCAAAACATGAGGTaGACACTCTTTGGACACAGGCTGTTCATCGACCCT | + |
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Preference number: 3 (lower is better) Translates to: LKSGHPSGQNMR*TLFGHRLFIDP Trigger: AGGGTCGATGAACAGCCTGTGTCCAAAGAGTGTCCACCTCATGTTTTGACCTGAAGGGTGACCAGACTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR TCA 90 bp | TCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTCTTCTCTCCTCCAGGACTTCTTaGCTCGGGTCTGTTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: SSIVMVVTKGSAFRVSLLSSRTS*LGSVNI Trigger: TATGTTAACAGACCCGAGTCAAGAAGTCCTGGAGGA...GAGAAGAGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR GCA 90 bp | TCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTCTTCTCACATCTTCTCCCTTATaGTCCGAGAAGCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSIVMVVTKGSAFRVSLLTSSPL*SEKPPL Trigger: AAGAGGAGGCTTCTCGGAGCATAAGGGAGAAGATGT...GAGAAGAGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034473.7 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCACTTCACTTGGCACTTaGAAGATACGGGTGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: STSVRSFQHCHGGNQGLSTSLGT*KIRVWL Trigger: GAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGT...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR TCA 90 bp | GAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTCTGAGCAAGAAGTCCTaGAGCTTGGATCATTGTACG | + |
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Preference number: 4 (lower is better) Translates to: EVSSIVMVVTKGSAFRVSLSKKS*SLDHCT Trigger: CGTACAATGATCCAAGCTTCAGGACTTCTTGCTCAG...AGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR TCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCCTGAGCAAGAAGTCCTaGAGCTTGGATCATTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: STSVRSFQHCHGGNQGLSLSKKS*SLDHCT Trigger: CGTACAATGATCCAAGCTTCAGGACTTCTTGCTCAG...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR GCA 90 bp | GAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTACATCTTCTCCCTTATaGTCCGAGAAGCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVSSIVMVVTKGSAFRVSTSSPL*SEKPPL Trigger: AAGAGGAGGCTTCTCGGAGCATAAGGGAGAAGATGT...AGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034473.7 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTACTTCACTTGGCACTTaGAAGATACGGGTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVTSLGT*KIRVWL Trigger: GAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGT...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR TCA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTCTGAGCAAGAAGTCCTaGAGCTTGGATCATTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVLSKKS*SLDHCT Trigger: CGTACAATGATCCAAGCTTCAGGACTTCTTGCTCAG...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCATCCATCACTTCACTTaGCACTTGGAAGATACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: STSVRSFQHCHGGNQGLSIHHFT*HLEDTG Trigger: ACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGAT...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | GAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTATCCATCACTTCACTTaGCACTTGGAAGATACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVSSIVMVVTKGSAFRVSIHHFT*HLEDTG Trigger: ACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGAT...AGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | TCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTCTTCTCGTTTCACCAAATCTCTaGTCACATGTATGTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIVMVVTKGSAFRVSLLVSPNL*SHVCHV Trigger: GACATGACATACATGTGACCAGAGATTTGGTGAAAC...GAGAAGAGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTATCCATCACTTCACTTaGCACTTGGAAGATACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVIHHFT*HLEDTG Trigger: ACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGAT...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | GAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTAGAAGTCCTGAAGCTTaGATCATTGTACGAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EVSSIVMVVTKGSAFRVSRSPEA*IIVRVT Trigger: TGTGACTCGTACAATGATCCAAGCTTCAGGACTTCT...AGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCAGAAGTCCTGAAGCTTaGATCATTGTACGAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: STSVRSFQHCHGGNQGLSRSPEA*IIVRVT Trigger: TGTGACTCGTACAATGATCCAAGCTTCAGGACTTCT...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTCACCAAATCTCTaGTCACATGTATGTCATGTC | + |
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Preference number: 4 (lower is better) Translates to: STSVRSFQHCHGGNQGLSVSPNL*SHVCHV Trigger: GACATGACATACATGTGACCAGAGATTTGGTGAAAC...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCTCAGACTTTGAGAGATaGTGTTTCACCAAATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: STSVRSFQHCHGGNQGLSSDFER*CFTKSL Trigger: CAGAGATTTGGTGAAACACCATCTCTCAAAGTCTGA...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | GAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTTCAGACTTTGAGAGATaGTGTTTCACCAAATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EVSSIVMVVTKGSAFRVSSDFER*CFTKSL Trigger: CAGAGATTTGGTGAAACACCATCTCTCAAAGTCTGA...AGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | GAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTCTCCATCTTATAAACTaGATCCTTGTTCTTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EVSSIVMVVTKGSAFRVSLHLIN*ILVLSS Trigger: GGAGGAAAGAACAAGGATCCAGTTTATAAGATGGAG...AGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTAGAAGTCCTGAAGCTTaGATCATTGTACGAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVRSPEA*IIVRVT Trigger: TGTGACTCGTACAATGATCCAAGCTTCAGGACTTCT...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CAA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCTGTCCGAGTTCACCCTaGGTGGGAAGGGTAGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: STSVRSFQHCHGGNQGLSCPSSP*VGRVAL Trigger: TAGGGCTACCCTTCCCACCAAGGGTGAACTCGGACA...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034473.7 |
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| CDS-3UTR CAA 90 bp | TCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTTAGAGTCTCTCTTCTCCACTTCACTTGGCACTaGGAAGATACGGGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SSIVMVVTKGSAFRVSLLHFTWH*EDTGVA Trigger: AGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTG...GAGAAGAGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CAA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCTGGGTGGGAGAGTCGTaGATGGACATCTTCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: STSVRSFQHCHGGNQGLSWVGES*MDIFSL Trigger: AAGGGAGAAGATGTCCATCAACGACTCTCCCACCCA...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034473.7 ENSMUST00000214287.2 |
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| CDS GCA 90 bp | TCCCTTATGCTCCGAGAAGCCTCCTCTTCCGTTTTGTTCAACCAGTaGTGCACAACGGATACAGCTTCGCTTTCTTCAACTTCAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: SLMLREASSSVLFNQ*CTTDTASLSSTSMS Trigger: GGACATTGAAGTTGAAGAAAGCGAAGCTGTATCCGTTGTGCAGCACTGGTTGAACAAAACGGAAGAGGAGGCTTCTCGGAGCATAAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034473.7 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTGCCTCCTCTTCCGTTTaGTTCAACCAGTGCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVASSSV*FNQCCT Trigger: TGTGCAGCACTGGTTGAACAAAACGGAAGAGGAGGC...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034473.7 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTCACTTCACTTGGCACTaGGAAGATACGGGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVHFTWH*EDTGVA Trigger: AGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTG...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CAA 90 bp | AGCACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCCATCCATCACTTCACTaGGCACTTGGAAGATACGGG | + |
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Preference number: 5 (lower is better) Translates to: STSVRSFQHCHGGNQGLSHPSLH*ALGRYG Trigger: CCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATG...GCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTAAGAAGTTTCCAGCATTGTCATGGTGGTAACCAAGGGCTCAGCGTTCATCCATCACTTCACTaGGCACTTGGAAGATACGGG | + |
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Preference number: 5 (lower is better) Translates to: TSVRSFQHCHGGNQGLSVHPSLH*ALGRYG Trigger: CCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATG...AACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAAACTTCTTACTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CCA 90 bp | TCTATTCGTTCCTGCATGACGTCATCCATCACTTCACTTGGCACTTaGAAGATACGGGTGTGGCTCCATCTTATAAACTGGATCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SIRSCMTSSITSLGT*KIRVWLHLINWILV Trigger: AACAAGGATCCAGTTTATAAGATGGAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATGACGTCATGCAGGAACGAATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CCA 90 bp | CACTTGATCTATTCGTTCCTGCATGACGTCATCCATCACTTCACTTaGCACTTGGAAGATACGGGTGTGGCTCCATCTTATAAACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: HLIYSFLHDVIHHFT*HLEDTGVAPSYKLD Trigger: ATCCAGTTTATAAGATGGAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATGACGTCATGCAGGAACGAATAGATCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS TCA 90 bp | CTCCATCTTATAAACTGGATCCTTGTTCTTTCCTCCAGGACTTCTTaGCTCGGGTCTGTTAACATATCAGACTTTGAGAGATGGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LHLINWILVLSSRTS*LGSVNISDFERWCF Trigger: GAAACACCATCTCTCAAAGTCTGATATGTTAACAGACCCGAGTCAAGAAGTCCTGGAGGAAAGAACAAGGATCCAGTTTATAAGATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CAA 72 bp | CTTCGCTTTCTTCAACTTCAATGTCCGAGTTCACCCTaGGTGGGAAGGGTAGCCCTACGGTTTTCCGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LRFLQLQCPSSP*VGRVALRFSGQ Trigger: TTGCCCGGAAAACCGTAGGGCTACCCTTCCCACCAAGGGTGAACTCGGACATTGAAGTTGAAGAAAGCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034473.7 |
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| CDS CAA 72 bp | TTCTCCCTTATGCTCCGAGAAGCCTCCTCTTCCGTTTaGTTCAACCAGTGCTGCACAACGGATACAGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: FSLMLREASSSV*FNQCCTTDTAS Trigger: CGAAGCTGTATCCGTTGTGCAGCACTGGTTGAACAAAACGGAAGAGGAGGCTTCTCGGAGCATAAGGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034473.7 |
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| CDS CAA 72 bp | GTCACATGTATGTCATGTCCATGGGTGGGAGAGTCGTaGATGGACATCTTCTCCCTTATGCTCCGAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VTCMSCPWVGES*MDIFSLMLREA Trigger: GGCTTCTCGGAGCATAAGGGAGAAGATGTCCATCAACGACTCTCCCACCCATGGACATGACATACATGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034473.7 ENSMUST00000214287.2 |
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| CDS CAA 90 bp | ATGGACATCTTCTCCCTTATGCTCCGAGAAGCCTCCTCTTCCGTTTaGTTCAACCAGTGCTGCACAACGGATACAGCTTCGCTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: MDIFSLMLREASSSV*FNQCCTTDTASLSS Trigger: TGAAGAAAGCGAAGCTGTATCCGTTGTGCAGCACTGGTTGAACAAAACGGAAGAGGAGGCTTCTCGGAGCATAAGGGAGAAGATGTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034473.7 |
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| CDS CCA 72 bp | TCCTGCATGACGTCATCCATCACTTCACTTGGCACTTaGAAGATACGGGTGTGGCTCCATCTTATAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SCMTSSITSLGT*KIRVWLHLINW Trigger: CCAGTTTATAAGATGGAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATGACGTCATGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CCA 72 bp | TTCACCAAATCTCTGGTCACATGTATGTCATGTCCATaGGTGGGAGAGTCGTTGATGGACATCTTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: FTKSLVTCMSCP*VGESLMDIFSL Trigger: AAGGGAGAAGATGTCCATCAACGACTCTCCCACCCATGGACATGACATACATGTGACCAGAGATTTGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034473.7 ENSMUST00000214287.2 |
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| CDS CCA 72 bp | TATTCGTTCCTGCATGACGTCATCCATCACTTCACTTaGCACTTGGAAGATACGGGTGTGGCTCCATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: YSFLHDVIHHFT*HLEDTGVAPSY Trigger: ATAAGATGGAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATGACGTCATGCAGGAACGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CAA 72 bp | TTCCTGCATGACGTCATCCATCACTTCACTTGGCACTaGGAAGATACGGGTGTGGCTCCATCTTATAAACTG | + |
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Preference number: 6 (lower is better) Translates to: FLHDVIHHFTWH*EDTGVAPSYKL Trigger: CAGTTTATAAGATGGAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATGACGTCATGCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CAA 72 bp | CGAGTCACACATGAGATGAGATACGCTTCGTCTCACTaGATCTATTCGTTCCTGCATGACGTCATCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: RVTHEMRYASSH*IYSFLHDVIHH Trigger: GTGATGGATGACGTCATGCAGGAACGAATAGATCAAGTGAGACGAAGCGTATCTCATCTCATGTGTGACTCG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CAA 90 bp | ATCTATTCGTTCCTGCATGACGTCATCCATCACTTCACTTGGCACTaGGAAGATACGGGTGTGGCTCCATCTTATAAACTGGATCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: IYSFLHDVIHHFTWH*EDTGVAPSYKLDPC Trigger: ACAAGGATCCAGTTTATAAGATGGAGCCACACCCGTATCTTCCAAGTGCCAAGTGAAGTGATGGATGACGTCATGCAGGAACGAATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CAA 90 bp | ATCATTGTACGAGTCACACATGAGATGAGATACGCTTCGTCTCACTaGATCTATTCGTTCCTGCATGACGTCATCCATCACTTCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: IIVRVTHEMRYASSH*IYSFLHDVIHHFTW Trigger: CCAAGTGAAGTGATGGATGACGTCATGCAGGAACGAATAGATCAAGTGAGACGAAGCGTATCTCATCTCATGTGTGACTCGTACAATGAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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| CDS CAA 90 bp | TTTCCTCCAGGACTTCTTGACTCGGGTCTGTTAACATATCAGACTTaGAGAGATGGTGTTTCACCAAATCTCTGGTCACATGTATGTCAT | + |
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Preference number: 6 (lower is better) Translates to: FPPGLLDSGLLTYQT*RDGVSPNLWSHVCH Trigger: ATGACATACATGTGACCAGAGATTTGGTGAAACACCATCTCTCAAAGTCTGATATGTTAACAGACCCGAGTCAAGAAGTCCTGGAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034473.7 ENSMUST00000214158.2 ENSMUST00000214287.2 |
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