Pregenerated sensors for SPATA18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029155Ensembl transcript IDs: ENSMUST00000041422.15, ENSMUST00000071077.14, ENSMUST00000113548.6, ENSMUST00000178631.6
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTTCCAACGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTTaGGAATGTACATCTTATTGGAGAAGGGCTTCGACTTCGAGATAC | + |
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Preference number: 1 (lower is better) Translates to: CSNGGKGTWLVDSVP*ECTSYWRRASTSRY Trigger: GTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR CCA 90 bp | GGAACGTGGCTGGTGGATTCAGTACCTTGCGAATGTACATCTTATTaGAGAAGGGCTTCGACTTCGAGATACCGTGCTTATTCCAAAATG | + |
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Preference number: 1 (lower is better) Translates to: GTWLVDSVPCECTSY*RRASTSRYRAYSKM Trigger: CATTTTGGAATAAGCACGGTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR GCA 90 bp | CGAATGTACATCTTATTGGAGAAGGGCTTCGACTTCGAGATACCGTaGTTATTCCAAAATGATTACGAGGACAAATGGGGCTTAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RMYILLEKGFDFEIP*LFQNDYEDKWGLSS Trigger: GGAGCTTAAGCCCCATTTGTCCTCGTAATCATTTTGGAATAAGCACGGTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR-3UTR GCA 90 bp | AGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCAGGCAGGTGGGTGGGTaGTCGGAGGAAGCTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RSEADKAGGWVLGGSWLFRQVGG*SEEAGC Trigger: ACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCT...GAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| 3UTR-3UTR CCA 90 bp | TCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAAGACAAGGCAGGTGGGTaGGTGCTCGGAGGAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SEADKAGGWVLGGSWLFQDKAGG*VLGGSW Trigger: CCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTC...TTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGACAAGGCAGGTGGGTaGGTGCTCGGAGGAAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TRQVGGCSEEAGCSNGGKDKAGG*VLGGSW Trigger: CCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTC...TTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| 3UTR-3UTR GCA 90 bp | CAACGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTTGCGAATGTACATCAGGCAGGTGGGTGGGTaGTCGGAGGAAGCTGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QRWQRNVAGGFSTLRMYIRQVGG*SEEAGC Trigger: ACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCT...GATGTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTACAAAGGCACTGAACGCTCTGTGCCAAGTGACACACAGAATTGCCTTGACAAGGCAGGTGGGTaGGTGCTCGGAGGAAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QSYKGTERSVPSDTQNCLDKAGG*VLGGSW Trigger: CCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTC...AAGGCAATTCTGTGTGTCACTTGGCACAGAGCGTTCAGTGCCTTTGTAACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
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| 3UTR CAA 90 bp | CTGTTCCAACGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTaGCGAATGTACATCTTATTGGAGAAGGGCTTCGACTTCGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: LFQRWQRNVAGGFST*RMYILLEKGFDFEI Trigger: TATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTGGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR CAA 90 bp | AGGAACGTGGCTGGTGGATTCAGTACCTTGCGAATGTACATCTTATaGGAGAAGGGCTTCGACTTCGAGATACCGTGCTTATTCCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RNVAGGFSTLRMYIL*EKGFDFEIPCLFQN Trigger: ATTTTGGAATAAGCACGGTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCAACGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTTGCGAATGTACGACTTCGAGATACCGTaGTTATTCCAAAATGATTAC | + |
|
Preference number: 2 (lower is better) Translates to: FQRWQRNVAGGFSTLRMYDFEIP*LFQNDY Trigger: GTAATCATTTTGGAATAAGCACGGTATCTCGAAGTC...GTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR CCA 72 bp | GGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTaGCAAAGGAACGTGGCTGGTGGATTCAGTACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GWVLGGSWLFQR*QRNVAGGFSTL Trigger: CAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR CCA 72 bp | CTGGTGGATTCAGTACCTTGCGAATGTACATCTTATTaGAGAAGGGCTTCGACTTCGAGATACCGTGCTTAT | + |
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Preference number: 3 (lower is better) Translates to: LVDSVPCECTSY*RRASTSRYRAY Trigger: ATAAGCACGGTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGAATCCACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| 3UTR GCA 72 bp | ATCTTATTGGAGAAGGGCTTCGACTTCGAGATACCGTaGTTATTCCAAAATGATTACGAGGACAAATGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILLEKGFDFEIP*LFQNDYEDKWG Trigger: GCCCCATTTGTCCTCGTAATCATTTTGGAATAAGCACGGTATCTCGAAGTCGAAGCCCTTCTCCAATAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| CDS-3UTR CCA 90 bp | GCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACCTGCGGCTGCGGCTGTaGCTACGGCTGCGGCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AGGWVLGGSWLFQRWQRNLRLRL*LRLRPR Trigger: TCGCGGCCGCAGCCGTAGCCACAGCCGCAGCCGCAG...GTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR GCA 90 bp | AGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCTGGACCGGCTGTGGCTaGGGCTGCGGCTGTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSEADKAGGWVLGGSWLFWTGCG*GCGCGY Trigger: GTAGCCACAGCCGCAGCCGCAGCCACAGCCGGTCCA...GAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGTGGACCGGCTGTGGCTaGGGCTGCGGCTGTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRQGRWVGARRKLAVPTWTGCG*GCGCGY Trigger: GTAGCCACAGCCGCAGCCGCAGCCACAGCCGGTCCA...CGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | GAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCTATTGGACCGGCTGTaGCTGCGGCTGCGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGGRQGRWVGARRKLAVLLDRL*LRLRLW Trigger: CCACAGCCGCAGCCGCAGCCACAGCCGGTCCAATAG...AACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | GGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGCCTCAGCAAGCACTaGGCATCCAGACGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRWVGARRKLAVPTVAKERLSKH*ASRRAW Trigger: CCAGGCCCGTCTGGATGCTCAGTGCTTGCTGAGGCG...TTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | AGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCACGCCTCAGCAAGCACTaGGCATCCAGACGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRWVGARRKLAVPTVARLSKH*ASRRAW Trigger: CCAGGCCCGTCTGGATGCTCAGTGCTTGCTGAGGCG...TGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | CAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCGCCTGTGCTAGGAGATaGGCTCCTGGCAGACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTRQVGGCSEEAGCSNGGACARR*APGRPP Trigger: GGGAGGTCTGCCAGGAGCCCATCTCCTAGCACAGGC...GCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGTGGCGGGCGTCCTCCTaGGCTTGGAGAGATTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGRQGRWVGARRKLAVPTWRASS*AWRDLS Trigger: GCTCAAATCTCTCCAAGCTCAGGAGGACGCCCGCCA...CGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | TGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCGCCTGTGCTAGGAGATaGGCTCCTGGCAGACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WVGARRKLAVPTVAKERGACARR*APGRPP Trigger: GGGAGGTCTGCCAGGAGCCCATCTCCTAGCACAGGC...GCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | ACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAACTATTGGACCGGCTGTaGCTGCGGCTGCGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TRQVGGCSEEAGCSNGGKLLDRL*LRLRLW Trigger: CCACAGCCGCAGCCGCAGCCACAGCCGGTCCAATAG...TTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | TCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACCACGCTGGACATTTTaGCACGGTTTGGGGACGGGC | + |
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Preference number: 4 (lower is better) Translates to: SEADKAGGWVLGGSWLFQPRWTF*HGLGTG Trigger: GCCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGG...TTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | GAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCTGTGGCGATGTAAATaGTCCGCTGCACCGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EVGGRQGRWVGARRKLAVLWRCK*SAAPSL Trigger: CAGAGACGGTGCAGCGGATCATTTACATCGCCACAG...AACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | CAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCCTGTGGCGATGTAAATaGTCCGCTGCACCGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QTRQVGGCSEEAGCSNGGLWRCK*SAAPSL Trigger: CAGAGACGGTGCAGCGGATCATTTACATCGCCACAG...GCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | AGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTTGCGCCTCAGCAAGCACTaGGCATCCAGACGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SWLFQRWQRNVAGGFSTLRLSKH*ASRRAW Trigger: CCAGGCCCGTCTGGATGCTCAGTGCTTGCTGAGGCG...CAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| CDS-3UTR TCA 90 bp | GAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCACAGTCATTCTCCATaGGAGCAGGCCACACGTGAT | + |
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Preference number: 4 (lower is better) Translates to: EVGGRQGRWVGARRKLAVHSHSP*EQATRD Trigger: ATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTG...AACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGGTTTTCTGCGGGAATaGCTACGCAGGAATGTACCG | + |
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Preference number: 4 (lower is better) Translates to: GGRQGRWVGARRKLAVPTGFLRE*LRRNVP Trigger: CGGTACATTCCTGCGTAGCCATTCCCGCAGAAAACC...CGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | GCGAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTCATACAGGTCCAGGTaGCAAACAATGTATTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ARSEADKAGGWVLGGSWLSYRSR*QTMYSE Trigger: CTCCGAATACATTGTTTGCCACCTGGACCTGTATGA...CAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | AAGCGAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTTGATCACAGGAGTTTaGGTTGTAGTCGTTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: KRGRRQTRQVGGCSEEAGLITGV*VVVVHP Trigger: TGGGTGAACGACTACAACTCAAACTCCTGTGATCAA...GCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
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| CDS-3UTR TCA 90 bp | CAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCCCATGTTTACAGAACTaGAGGAAGTCTGCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QTRQVGGCSEEAGCSNGGPCLQN*RKSAAR Trigger: CCTTGCTGCAGACTTCCTTCAGTTCTGTAAACATGG...GCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
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| CDS-3UTR TCA 90 bp | GGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGCACGGATCACATCATTaGCACTGCTTTGCGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: GRQGRWVGARRKLAVPTVHGSHH*HCFASH Trigger: ATGACTCGCAAAGCAGTGTCAATGATGTGATCCGTG...CACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | CGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACCACGGATCACATCATTaGCACTGCTTTGCGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RRQTRQVGGCSEEAGCSNHGSHH*HCFASH Trigger: ATGACTCGCAAAGCAGTGTCAATGATGTGATCCGTG...GTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR GCA 90 bp | AGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCGATCCCAAAGAGCTGTaGCTGCACTTTAGCAACTTG | + |
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Preference number: 4 (lower is better) Translates to: RSEADKAGGWVLGGSWLFDPKEL*LHFSNL Trigger: CAAGTTGCTAAAGTGCAGGCACAGCTCTTTGGGATC...GAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
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| CDS-3UTR GCA 90 bp | GGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAAGAACTGAAGGAAGTCTaGAGCAAGGGCAAAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GRWVGARRKLAVPTVAKEELKEV*SKGKRR Trigger: TCGCCTTTTGCCCTTGCTGCAGACTTCCTTCAGTTC...TTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
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| CDS-3UTR GCA 90 bp | GCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTTTATCTCCTCCTCTaGAGCCAGGAGGGATATGGT | + |
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Preference number: 4 (lower is better) Translates to: AGGWVLGGSWLFQRWQRNVYLLL*SQEGYG Trigger: ACCATATCCCTCCTGGCTGCAGAGGAGGAGATAAAC...GTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR GCA 90 bp | GGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCTGTTTATCTCCTCCTCTaGAGCCAGGAGGGATATGGT | + |
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Preference number: 4 (lower is better) Translates to: GWVLGGSWLFQRWQRNVAVYLLL*SQEGYG Trigger: ACCATATCCCTCCTGGCTGCAGAGGAGGAGATAAAC...AGCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR GCA 90 bp | AGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCAGATACAAGGTTTTCTaGGGGAATGGCTACGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RSEADKAGGWVLGGSWLFRYKVF*GNGYAG Trigger: TCCTGCGTAGCCATTCCCGCAGAAAACCTTGTATCT...GAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178631.6 |
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| CDS-3UTR TCA 90 bp | TGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCAACTTCAGGAGGGAATaGGATCTTGGGGTTGACGTT | + |
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Preference number: 4 (lower is better) Translates to: WVGARRKLAVPTVAKERGNFRRE*DLGVDV Trigger: AACGTCAACCCCAAGATCTCATTCCCTCCTGAAGTT...GCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR GCA 90 bp | TGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCTCATTGACACTGCTTTaGGAGTCATACAGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WVGARRKLAVPTVAKERGSLTLL*ESYRSR Trigger: CCTGGACCTGTATGACTCGCAAAGCAGTGTCAATGA...GCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR CCA 90 bp | GGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGTCATACAGGTCCAGGTaGCAAACAATGTATTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GRQGRWVGARRKLAVPTVSYRSR*QTMYSE Trigger: CTCCGAATACATTGTTTGCCACCTGGACCTGTATGA...CACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAATCATTGACACTGCTTTaGGAGTCATACAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRQVGGCSEEAGCSNGGKSLTLL*ESYRSR Trigger: CCTGGACCTGTATGACTCGCAAAGCAGTGTCAATGA...TTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGTTTAGCTACATGAAATaGCTCCACTGTGGCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGRWVGARRKLAVPTVAKFSYMK*LHCGDV Trigger: TACATCGCCACAGTGGAGGCATTTCATGTAGCTAAA...CTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR GCA 90 bp | CGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACCGCAGGAATGTACCGTaGTTATTCCAAAATGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRQTRQVGGCSEEAGCSNRRNVP*LFQNDY Trigger: GTAATCATTTTGGAATAAGCACGGTACATTCCTGCG...GTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178631.6 |
||
| CDS-3UTR CCA 90 bp | GAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGTGGCCACGCTGGACATTTTaGCACGGTTTGGGGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELPFHFMLSEVGGRQGRWPRWTF*HGLGTG Trigger: GCCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGG...CCACCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTACAAAGGCACTGAACGCTCTGTGCCAAGTGACACACAGAATTGCCTTTGGCGGGCGTCCTCCTaGGCTTGGAGAGATTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSYKGTERSVPSDTQNCLWRASS*AWRDLS Trigger: GCTCAAATCTCTCCAAGCTCAGGAGGACGCCCGCCA...AAGGCAATTCTGTGTGTCACTTGGCACAGAGCGTTCAGTGCCTTTGTAACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR GCA 90 bp | CGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGACTTCGAGATACCGTaGTTATTCCAAAATGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRQTRQVGGCSEEAGCSNDFEIP*LFQNDY Trigger: GTAATCATTTTGGAATAAGCACGGTATCTCGAAGTC...GTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR CCA 90 bp | AAGCGAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTTTTTACTTCTAAGTTaGAAATCCTGTGTAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KRGRRQTRQVGGCSEEAGFLLLS*KSCVAH Trigger: GTGTGCTACACAGGATTTCCAACTTAGAAGTAAAAA...GCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTCGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR TCA 90 bp | GAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGTGGCTTGGGCTGTCACTGTaGGGATCCCAAAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELPFHFMLSEVGGRQGRWLGLSL*GSQRAV Trigger: CACAGCTCTTTGGGATCCTCACAGTGACAGCCCAAG...CCACCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR TCA 90 bp | CAACGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTTGCGAATGTACATCCACAGTCATTCTCCATaGGAGCAGGCCACACGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QRWQRNVAGGFSTLRMYIHSHSP*EQATRD Trigger: ATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTG...GATGTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
||
| CDS-3UTR TCA 90 bp | CACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGCTGTGGCGATGTAAATaGTCCGCTGCACCGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRIAFSFHVKRGRRQTRQLWRCK*SAAPSL Trigger: CAGAGACGGTGCAGCGGATCATTTACATCGCCACAG...CTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCTCTTGAAATGCCTGAATaGCATTTTAGCTACATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWVLGGSWLFQRWQRNVALEMPE*HFSYMK Trigger: TTTCATGTAGCTAAAATGGCATTCAGGCATTTCAAG...AGCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR GCA 90 bp | AGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCACTTGAAATGCCTGAATaGCATTTTAGCTACATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQGRWVGARRKLAVPTVALEMPE*HFSYMK Trigger: TTTCATGTAGCTAAAATGGCATTCAGGCATTTCAAG...TGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGCTTGAAATGCCTGAATaGCATTTTAGCTACATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGRWVGARRKLAVPTVAKLEMPE*HFSYMK Trigger: TTTCATGTAGCTAAAATGGCATTCAGGCATTTCAAG...CTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| 3UTR CAA 72 bp | CGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTaGCGAATGTACATCTTATTGGAGAAGGGCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RWQRNVAGGFST*RMYILLEKGFD Trigger: GTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
||
| CDS-3UTR TCA 90 bp | CAAGTGACACACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGCACAGTCATTCTCCATaGGAGCAGGCCACACGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVTHRIAFSFHVKRGRRQHSHSP*EQATRD Trigger: ATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTG...CTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGTGTGTCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR GCA 90 bp | GAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGTGGTCATTGACACTGCTTTaGGAGTCATACAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELPFHFMLSEVGGRQGRWSLTLL*ESYRSR Trigger: CCTGGACCTGTATGACTCGCAAAGCAGTGTCAATGA...CCACCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR TCA 90 bp | AGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGTGCACGGATCACATCATTaGCACTGCTTTGCGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIAFSFHVKRGRRQTRQVHGSHH*HCFASH Trigger: ATGACTCGCAAAGCAGTGTCAATGATGTGATCCGTG...CACCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CCA 90 bp | CACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGTTATTTCCCCCTTCTTaGGCTGTCACTGTGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HRIAFSFHVKRGRRQTRQLFPPS*AVTVRI Trigger: GATCCTCACAGTGACAGCCCAAGAAGGGGGAAATAA...CTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR CCA 90 bp | GAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGTGGTCATACAGGTCCAGGTaGCAAACAATGTATTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELPFHFMLSEVGGRQGRWSYRSR*QTMYSE Trigger: CTCCGAATACATTGTTTGCCACCTGGACCTGTATGA...CCACCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR TCA 90 bp | CAAGTGACACACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGAACTTCAGGAGGGAATaGGATCTTGGGGTTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVTHRIAFSFHVKRGRRQNFRRE*DLGVDV Trigger: AACGTCAACCCCAAGATCTCATTCCCTCCTGAAGTT...CTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGTGTGTCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| 3UTR CAA 72 bp | GCTGGTGGATTCAGTACCTTGCGAATGTACATCTTATaGGAGAAGGGCTTCGACTTCGAGATACCGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGGFSTLRMYIL*EKGFDFEIPCL Trigger: TAAGCACGGTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGAATCCACCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
||
| CDS-3UTR TCA 90 bp | TCAGTACCTTGCGAATGTACATCTTATTGGAGAAGGGCTTCGACTTCGAGATACAACTTCAGGAGGGAATaGGATCTTGGGGTTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVPCECTSYWRRASTSRYNFRRE*DLGVDV Trigger: AACGTCAACCCCAAGATCTCATTCCCTCCTGAAGTT...GTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
||
| CDS CCA 90 bp | ACGGCTGCGGCCGCGACGGTGGCTGCGGGTGCCTGTGCTAGGAGATaGGCTCCTGGCAGACCTCCCCTGGAGACCACTTTTCTCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TAAAATVAAGACARR*APGRPPLETTFLSR Trigger: TCTGCTGAGAAAAGTGGTCTCCAGGGGAGGTCTGCCAGGAGCCCATCTCCTAGCACAGGCACCCGCAGCCACCGTCGCGGCCGCAGCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | GGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCGCCACGCTGGACATTTaGGCACGGTTTGGGGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRQTRQVGGCSEEAGCSATLDI*ARFGDG Trigger: CCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGGC...GGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGACGGGCTTCTGATCTaGGCCACTGTGGTGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRQGRWVGARRKLAVPTDGLLI*ATVVQG Trigger: CCCCTGCACCACAGTGGCCAAGATCAGAAGCCCGTC...CGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | TCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAAGACGGGCTTCTGATCTaGGCCACTGTGGTGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEADKAGGWVLGGSWLFQDGLLI*ATVVQG Trigger: CCCCTGCACCACAGTGGCCAAGATCAGAAGCCCGTC...TTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGCCACGCTGGACATTTaGGCACGGTTTGGGGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGRWVGARRKLAVPTVAKATLDI*ARFGDG Trigger: CCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGGC...CTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | AGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAGGCGTCCTCCTGAGCTaGGAGAGATTTGAGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQGRWVGARRKLAVPTVAGVLLS*ERFELL Trigger: AAGCAGCTCAAATCTCTCCAAGCTCAGGAGGACGCC...TGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS TCA 90 bp | TCAGCAAGCACTGAGCATCCAGACGGGCCTGGGAATAGGCGTCGCTaGATCGGGACAGGAGAGCAGCTTTGCGAGCCACGCTGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: SASTEHPDGPGNRRR*IGTGEQLCEPRWTF Trigger: AAATGTCCAGCGTGGCTCGCAAAGCTGCTCTCCTGTCCCGATTCAGCGACGCCTATTCCCAGGCCCGTCTGGATGCTCAGTGCTTGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS CCA 90 bp | CTGCGGGTGCCTGTGCTAGGAGATGGGCTCCTGGCAGACCTCCCCTaGAGACCACTTTTCTCAGCAGACAGGACAGCTATCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRVPVLGDGLLADLP*RPLFSADRTAISSF Trigger: GAAGGAAGAGATAGCTGTCCTGTCTGCTGAGAAAAGTGGTCTCCAGGGGAGGTCTGCCAGGAGCCCATCTCCTAGCACAGGCACCCGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS CCA 90 bp | CAGGAGAGCAGCTTTGCGAGCCACGCTGGACATTTTGGCACGGTTTaGGGACGGGCTTCTGATCTTGGCCACTGTGGTGCAGGGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: QESSFASHAGHFGTV*GRASDLGHCGAGAI Trigger: AATAGCCCCTGCACCACAGTGGCCAAGATCAGAAGCCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGGCTCGCAAAGCTGCTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | CGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACTTCCTCACCCGGATCTaGAAATGCCTGAATGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RRQTRQVGGCSEEAGCSNFLTRI*KCLNAI Trigger: AATGGCATTCAGGCATTTCAAGATCCGGGTGAGGAA...GTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGATCATTGACACTGCTTaGCGAGTCATACAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRQGRWVGARRKLAVPTIIDTA*RVIQVQ Trigger: CTGGACCTGTATGACTCGCAAAGCAGTGTCAATGAT...CGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCATCATTGACACTGCTTaGCGAGTCATACAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTRQVGGCSEEAGCSNGGIIDTA*RVIQVQ Trigger: CTGGACCTGTATGACTCGCAAAGCAGTGTCAATGAT...GCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCGCACGGATCACATCATaGACACTGCTTTGCGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WVGARRKLAVPTVAKERGARITS*TLLCES Trigger: TGACTCGCAAAGCAGTGTCAATGATGTGATCCGTGC...GCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGAGGGAATGAGATCTaGGGGTTGACGTTCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RWVGARRKLAVPTVAKERGGNEI*GLTFMA Trigger: TGCCATGAACGTCAACCCCAAGATCTCATTCCCTCC...ACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | AAGCGAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCGCTCTAAGGACTGCATaGCAAAAGCAATGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRGRRQTRQVGGCSEEAGALRTA*QKQCSK Trigger: TTTGCTGCATTGCTTTTGCAATGCAGTCCTTAGAGC...GCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | AAGCGAGGTCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCATGGTTGATCCGTTCTaGGCTCCTTCAAGACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KRGRRQTRQVGGCSEEAGMVDPF*APSRLF Trigger: AAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCAT...GCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGACCTCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS GCA 90 bp | AAATGCCTCCACTGTGGCGATGTAAATGATCCGCTGCACCGTCTCTaGCCTGTCGATGCAACGCCTCAGCAAGCACTGAGCATCCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: KCLHCGDVNDPLHRL*PVDATPQQALSIQT Trigger: CGTCTGGATGCTCAGTGCTTGCTGAGGCGTTGCATCGACAGGGCAGAGACGGTGCAGCGGATCATTTACATCGCCACAGTGGAGGCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | GGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAATTCCTCACCCGGATCTaGAAATGCCTGAATGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GRWVGARRKLAVPTVAKEFLTRI*KCLNAI Trigger: AATGGCATTCAGGCATTTCAAGATCCGGGTGAGGAA...TTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACATCATTGACACTGCTTaGCGAGTCATACAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGGWVLGGSWLFQRWQRNIIDTA*RVIQVQ Trigger: CTGGACCTGTATGACTCGCAAAGCAGTGTCAATGAT...GTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | CGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGCTCTAAGGACTGCATaGCAAAAGCAATGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRQTRQVGGCSEEAGCSNALRTA*QKQCSK Trigger: TTTGCTGCATTGCTTTTGCAATGCAGTCCTTAGAGC...GTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGTCCAAAAAGCCTCTTTaGGTGACAGCTTCTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGRWVGARRKLAVPTVAKSKKPL*VTASPF Trigger: GAAGGGAGAAGCTGTCACCAAAAGAGGCTTTTTGGA...CTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACTGTAAAGATTCGCTTTaGGCCAGCTTCTTCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGGWVLGGSWLFQRWQRNCKDSL*ASFFRL Trigger: AAGCCTGAAGAAGCTGGCCAAAAGCGAATCTTTACA...GTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
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| CDS-3UTR CAA 90 bp | AGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTATTATTTCCCCCTTCTaGGGCTGTCACTGTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RWVGARRKLAVPTVAKERIISPF*GCHCED Trigger: ATCCTCACAGTGACAGCCCAAGAAGGGGGAAATAAT...ACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR CAA 90 bp | TCGGAGGCAGACAAGGCAGGTGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAAGCTCTAAGGACTGCATaGCAAAAGCAATGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEADKAGGWVLGGSWLFQALRTA*QKQCSK Trigger: TTTGCTGCATTGCTTTTGCAATGCAGTCCTTAGAGC...TTGGAACAGCCAGCTTCCTCCGAGCACCCACCCACCTGCCTTGTCTGCCTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR CAA 90 bp | GGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCTCGAATGTACATCTTATaGGAGAAGGGCTTCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GWVLGGSWLFQRWQRNVARMYIL*EKGFDF Trigger: GAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCG...AGCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS TCA 90 bp | TCTCCGAGGTTTTGTGGCGGGCGTCCTCCTGAGCTTGGAGAGATTTaGGCTCGTCTTGAACCTGGGTTGGTTGAGTCTCTGAGAACGATT | + |
|
Preference number: 5 (lower is better) Translates to: SPRFCGGRPPELGEI*ARLEPGLVESLRTI Trigger: AATCGTTCTCAGAGACTCAACCAACCCAGGTTCAAGACGAGCTCAAATCTCTCCAAGCTCAGGAGGACGCCCGCCACAAAACCTCGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041422.15 |
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| CDS-3UTR CAA 90 bp | GGCTGTTCCAACGGTGGCAAAGGAACGTGGCTGGTGGATTCAGTACCTTGCGAAGCACGGATCACATCATaGACACTGCTTTGCGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCSNGGKGTWLVDSVPCEARITS*TLLCES Trigger: TGACTCGCAAAGCAGTGTCAATGATGTGATCCGTGC...TTCGCAAGGTACTGAATCCACCAGCCACGTTCCTTTGCCACCGTTGGAACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCGTTTTTACTTCTAAGTaGGAAATCCTGTGTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: WVGARRKLAVPTVAKERGVFTSK*EILCST Trigger: TGTGCTACACAGGATTTCCAACTTAGAAGTAAAAAC...GCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGTGCTCGGAGGAAGCTGGCTGTTCCAACGGTGGCAAAGGAACGTGGCTCTCTTCCTTCAGATTTaGCAGATGTTTCTCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GWVLGGSWLFQRWQRNVALFLQI*QMFLIV Trigger: AACTATGAGAAACATCTGCAAAATCTGAAGGAAGAG...AGCCACGTTCCTTTGCCACCGTTGGAACAGCCAGCTTCCTCCGAGCACCCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS CCA 90 bp | AGGCGACACTTGATTGTCTCCACGCCTTCATTATTTCCCCCTTCTTaGGCTGTCACTGTGAGGATCCCAAAGAGCTGTGCCTGCACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RRHLIVSTPSLFPPS*AVTVRIPKSCACTL Trigger: TAAAGTGCAGGCACAGCTCTTTGGGATCCTCACAGTGACAGCCCAAGAAGGGGGAAATAATGAAGGCGTGGAGACAATCAAGTGTCGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 |
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| CDS-3UTR CAA 90 bp | CACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGGCGTCCTCCTGAGCTaGGAGAGATTTGAGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRIAFSFHVKRGRRQTRQGVLLS*ERFELL Trigger: AAGCAGCTCAAATCTCTCCAAGCTCAGGAGGACGCC...CTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS TCA 90 bp | CTGGATGAAGTCAGTGAGGAGGCAGAAGTCAACTTCAGGAGGGAATaGGATCTTGGGGTTGACGTTCATGGCACGGATCACATCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDEVSEEAEVNFRRE*DLGVDVHGTDHIID Trigger: GTCAATGATGTGATCCGTGCCATGAACGTCAACCCCAAGATCTCATTCCCTCCTGAAGTTGACTTCTGCCTCCTCACTGACTTCATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
||
| CDS TCA 90 bp | ATTGGAGAAGGGCTTCGACTTCGAGATACCGTGCTTATTCCAAAATaGTTACGAGGACAAATGGGGCTTAAGCTCCTGCTACGGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: IGEGLRLRDTVLIPK*LRGQMGLKLLLRHR Trigger: GCGGTGCCGTAGCAGGAGCTTAAGCCCCATTTGTCCTCGTAATCATTTTGGAATAAGCACGGTATCTCGAAGTCGAAGCCCTTCTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
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| CDS GCA 90 bp | TTGCGAGTCATACAGGTCCAGGTGGCAAACAATGTATTCGGAGACTaGGGTCTCAAAGTCAGTATTAGATCCCACGTTCGATGGCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRVIQVQVANNVFGD*GLKVSIRSHVRWRQ Trigger: CTGACGCCATCGAACGTGGGATCTAATACTGACTTTGAGACCGCAGTCTCCGAATACATTGTTTGCCACCTGGACCTGTATGACTCGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CCA 90 bp | GGACAGCTATCTCTTCCTTCAGATTTTGCAGATGTTTCTCATAGTTaGACACCACGTCTTGGGGCCGTTGGTCCTGGGTTCGTTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLSLPSDFADVSHS*TPRLGAVGPGFVWL Trigger: CAACCAAACGAACCCAGGACCAACGGCCCCAAGACGTGGTGTCCAACTATGAGAAACATCTGCAAAATCTGAAGGAAGAGATAGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CAA 90 bp | ACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGGGAGGGAATGAGATCTaGGGGTTGACGTTCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TELPFHFMLSEVGGRQGRGGNEI*GLTFMA Trigger: TGCCATGAACGTCAACCCCAAGATCTCATTCCCTCC...CCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CCA 90 bp | TTATCTCCTCCTCTGCAGCCAGGAGGGATATGGTTGATCCGTTCTTaGCTCCTTCAAGACTCTTTCCACTTTCAGCCAGATCGTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSPPLQPGGIWLIRS*LLQDSFHFQPDRLE Trigger: TTCAAGACGATCTGGCTGAAAGTGGAAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGGAGGAGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CAA 90 bp | AGAGTTACAAAGGCACTGAACGCTCTGTGCCAAGTGACACACAGAATTGCCTTTGGCAAAAGGCGACACTaGATTGTCTCCACGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVTKALNALCQVTHRIAFGKRRH*IVSTPS Trigger: TGAAGGCGTGGAGACAATCAAGTGTCGCCTTTTGCC...AAAGGCAATTCTGTGTGTCACTTGGCACAGAGCGTTCAGTGCCTTTGTAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071077.14 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACACACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGGGAGGGAATGAGATCTaGGGGTTGACGTTCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QVTHRIAFSFHVKRGRRQGGNEI*GLTFMA Trigger: TGCCATGAACGTCAACCCCAAGATCTCATTCCCTCC...CTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGTGTGTCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS GCA 90 bp | CGATGGCGTCAGCATCTTCCTCACCCGGATCTTGAAATGCCTGAATaGCATTTTAGCTACATGAAATGCCTCCACTGTGGCGATGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RWRQHLPHPDLEMPE*HFSYMKCLHCGDVN Trigger: ATTTACATCGCCACAGTGGAGGCATTTCATGTAGCTAAAATGGCATTCAGGCATTTCAAGATCCGGGTGAGGAAGATGCTGACGCCATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CCA 90 bp | CGGATCACATCATTGACACTGCTTTGCGAGTCATACAGGTCCAGGTaGCAAACAATGTATTCGGAGACTGCGGTCTCAAAGTCAGTATTA | + |
|
Preference number: 5 (lower is better) Translates to: RITSLTLLCESYRSR*QTMYSETAVSKSVL Trigger: TAATACTGACTTTGAGACCGCAGTCTCCGAATACATTGTTTGCCACCTGGACCTGTATGACTCGCAAAGCAGTGTCAATGATGTGATCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS-3UTR CAA 90 bp | AGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGTGATGGTTGATCCGTTCTaGGCTCCTTCAAGACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RIAFSFHVKRGRRQTRQVMVDPF*APSRLF Trigger: AAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCAT...CACCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CAA 90 bp | ACAGAATTGCCTTTTCATTTCATGTTAAGCGAGGTCGGAGGCAGACAAGGCAGGCGAATGTACATCTTATaGGAGAAGGGCTTCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TELPFHFMLSEVGGRQGRRMYIL*EKGFDF Trigger: GAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCG...CCTGCCTTGTCTGCCTCCGACCTCGCTTAACATGAAATGAAAAGGCAATTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS-3UTR CAA 90 bp | TCAGTACCTTGCGAATGTACATCTTATTGGAGAAGGGCTTCGACTTCGAGATACTTCCTCACCCGGATCTaGAAATGCCTGAATGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SVPCECTSYWRRASTSRYFLTRI*KCLNAI Trigger: AATGGCATTCAGGCATTTCAAGATCCGGGTGAGGAA...GTATCTCGAAGTCGAAGCCCTTCTCCAATAAGATGTACATTCGCAAGGTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| CDS TCA 72 bp | ACTGAGCATCCAGACGGGCCTGGGAATAGGCGTCGCTaGATCGGGACAGGAGAGCAGCTTTGCGAGCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: TEHPDGPGNRRR*IGTGEQLCEPR Trigger: GCGTGGCTCGCAAAGCTGCTCTCCTGTCCCGATTCAGCGACGCCTATTCCCAGGCCCGTCTGGATGCTCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CAA 72 bp | GACAGGAGAGCAGCTTTGCGAGCCACGCTGGACATTTaGGCACGGTTTGGGGACGGGCTTCTGATCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DRRAALRATLDI*ARFGDGLLILA Trigger: GGCCAAGATCAGAAGCCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGGCTCGCAAAGCTGCTCTCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS CAA 90 bp | CTGAATCGGGACAGGAGAGCAGCTTTGCGAGCCACGCTGGACATTTaGGCACGGTTTGGGGACGGGCTTCTGATCTTGGCCACTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LNRDRRAALRATLDI*ARFGDGLLILATVV Trigger: CACCACAGTGGCCAAGATCAGAAGCCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGGCTCGCAAAGCTGCTCTCCTGTCCCGATTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS GCA 72 bp | CACTGTGGCGATGTAAATGATCCGCTGCACCGTCTCTaGCCTGTCGATGCAACGCCTCAGCAAGCACTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HCGDVNDPLHRL*PVDATPQQALS Trigger: GCTCAGTGCTTGCTGAGGCGTTGCATCGACAGGGCAGAGACGGTGCAGCGGATCATTTACATCGCCACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CCA 72 bp | CCTGTGCTAGGAGATGGGCTCCTGGCAGACCTCCCCTaGAGACCACTTTTCTCAGCAGACAGGACAGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: PVLGDGLLADLP*RPLFSADRTAI Trigger: GATAGCTGTCCTGTCTGCTGAGAAAAGTGGTCTCCAGGGGAGGTCTGCCAGGAGCCCATCTCCTAGCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS CCA 72 bp | AGCTTTGCGAGCCACGCTGGACATTTTGGCACGGTTTaGGGACGGGCTTCTGATCTTGGCCACTGTGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFASHAGHFGTV*GRASDLGHCGA Trigger: TGCACCACAGTGGCCAAGATCAGAAGCCCGTCCCCAAACCGTGCCAAAATGTCCAGCGTGGCTCGCAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS CAA 90 bp | AGAGCGACGGTTCTCCGAGGTTTTGTGGCGGGCGTCCTCCTGAGCTaGGAGAGATTTGAGCTCGTCTTGAACCTGGGTTGGTTGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RATVLRGFVAGVLLS*ERFELVLNLGWLSL Trigger: GAGACTCAACCAACCCAGGTTCAAGACGAGCTCAAATCTCTCCAAGCTCAGGAGGACGCCCGCCACAAAACCTCGGAGAACCGTCGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041422.15 |
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| CDS CAA 72 bp | GTTCTCCGAGGTTTTGTGGCGGGCGTCCTCCTGAGCTaGGAGAGATTTGAGCTCGTCTTGAACCTGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLRGFVAGVLLS*ERFELVLNLGW Trigger: CCAACCCAGGTTCAAGACGAGCTCAAATCTCTCCAAGCTCAGGAGGACGCCCGCCACAAAACCTCGGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041422.15 |
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| CDS TCA 72 bp | TTTTGTGGCGGGCGTCCTCCTGAGCTTGGAGAGATTTaGGCTCGTCTTGAACCTGGGTTGGTTGAGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FCGGRPPELGEI*ARLEPGLVESL Trigger: CAGAGACTCAACCAACCCAGGTTCAAGACGAGCTCAAATCTCTCCAAGCTCAGGAGGACGCCCGCCACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041422.15 |
||
| CDS TCA 72 bp | GTCAGTGAGGAGGCAGAAGTCAACTTCAGGAGGGAATaGGATCTTGGGGTTGACGTTCATGGCACGGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: VSEEAEVNFRRE*DLGVDVHGTDH Trigger: GTGATCCGTGCCATGAACGTCAACCCCAAGATCTCATTCCCTCCTGAAGTTGACTTCTGCCTCCTCACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CAA 90 bp | AAGGCGACACTTGATTGTCTCCACGCCTTCATTATTTCCCCCTTCTaGGGCTGTCACTGTGAGGATCCCAAAGAGCTGTGCCTGCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: KATLDCLHAFIISPF*GCHCEDPKELCLHF Trigger: AAAGTGCAGGCACAGCTCTTTGGGATCCTCACAGTGACAGCCCAAGAAGGGGGAAATAATGAAGGCGTGGAGACAATCAAGTGTCGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 |
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| CDS CCA 72 bp | CCTCTGCAGCCAGGAGGGATATGGTTGATCCGTTCTTaGCTCCTTCAAGACTCTTTCCACTTTCAGCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLQPGGIWLIRS*LLQDSFHFQPD Trigger: ATCTGGCTGAAAGTGGAAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS CCA 72 bp | GCTGGTTTATCTCCTCCTCTGCAGCCAGGAGGGATATaGTTGATCCGTTCTTGGCTCCTTCAAGACTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGLSPPLQPGGI*LIRSWLLQDSF Trigger: GAAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGGAGGAGATAAACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS CAA 72 bp | ATCTTGGGGTTGACGTTCATGGCACGGATCACATCATaGACACTGCTTTGCGAGTCATACAGGTCCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILGLTFMARITS*TLLCESYRSRW Trigger: CCACCTGGACCTGTATGACTCGCAAAGCAGTGTCAATGATGTGATCCGTGCCATGAACGTCAACCCCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CAA 72 bp | TCCTCTGCAGCCAGGAGGGATATGGTTGATCCGTTCTaGGCTCCTTCAAGACTCTTTCCACTTTCAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSAARRDMVDPF*APSRLFPLSAR Trigger: TCTGGCTGAAAGTGGAAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS CAA 72 bp | GGTTTATCTCCTCCTCTGCAGCCAGGAGGGATATGGTaGATCCGTTCTTGGCTCCTTCAAGACTCTTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLSPPLQPGGIW*IRSWLLQDSFH Trigger: GTGGAAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGGAGGAGATAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS TCA 72 bp | GTTTATCTCCTCCTCTGCAGCCAGGAGGGATATGGTTaGTCCGTTCTTGGCTCCTTCAAGACTCTTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: VYLLLCSQEGYG*SVLGSFKTLST Trigger: AGTGGAAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGGAGGAGATAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS GCA 72 bp | TGGAGAAGGGCTTCGACTTCGAGATACAAGGTTTTCTaGGGGAATGGCTACGCAGGAATGTACCGTGCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: WRRASTSRYKVF*GNGYAGMYRAY Trigger: ATAAGCACGGTACATTCCTGCGTAGCCATTCCCGCAGAAAACCTTGTATCTCGAAGTCGAAGCCCTTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178631.6 |
||
| CDS CCA 72 bp | TCTCTTCCTTCAGATTTTGCAGATGTTTCTCATAGTTaGACACCACGTCTTGGGGCCGTTGGTCCTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLPSDFADVSHS*TPRLGAVGPGF Trigger: GAACCCAGGACCAACGGCCCCAAGACGTGGTGTCCAACTATGAGAAACATCTGCAAAATCTGAAGGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
||
| CDS CAA 72 bp | CTGAAGGAAGTCTGCAGCAAGGGCAAAAGGCGACACTaGATTGTCTCCACGCCTTCATTATTTCCCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKEVCSKGKRRH*IVSTPSLFPPS Trigger: AGAAGGGGGAAATAATGAAGGCGTGGAGACAATCAAGTGTCGCCTTTTGCCCTTGCTGCAGACTTCCTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 |
||
| CDS CAA 90 bp | TTTACAGAACTGAAGGAAGTCTGCAGCAAGGGCAAAAGGCGACACTaGATTGTCTCCACGCCTTCATTATTTCCCCCTTCTTGGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FTELKEVCSKGKRRH*IVSTPSLFPPSWAV Trigger: GACAGCCCAAGAAGGGGGAAATAATGAAGGCGTGGAGACAATCAAGTGTCGCCTTTTGCCCTTGCTGCAGACTTCCTTCAGTTCTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 |
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| CDS CAA 90 bp | TACGGCACCGCATTACTGGTCGCACGGAACTCCAAAAAGCCTCTTTaGGTGACAGCTTCTCCCTTCATAATGACACAGTCATTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: YGTALLVARNSKKPL*VTASPFIMTQSFSM Trigger: CATGGAGAATGACTGTGTCATTATGAAGGGAGAAGCTGTCACCAAAAGAGGCTTTTTGGAGTTCCGTGCGACCAGTAATGCGGTGCCGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| CDS GCA 72 bp | TTCTTGGGCTGTCACTGTGAGGATCCCAAAGAGCTGTaGCTGCACTTTAGCAACTTGTTCGATGAGTTCGAT | + |
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Preference number: 6 (lower is better) Translates to: FLGCHCEDPKEL*LHFSNLFDEFD Trigger: ATCGAACTCATCGAACAAGTTGCTAAAGTGCAGGCACAGCTCTTTGGGATCCTCACAGTGACAGCCCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 |
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| CDS GCA 72 bp | CAGCATCTTCCTCACCCGGATCTTGAAATGCCTGAATaGCATTTTAGCTACATGAAATGCCTCCACTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QHLPHPDLEMPE*HFSYMKCLHCG Trigger: GCCACAGTGGAGGCATTTCATGTAGCTAAAATGGCATTCAGGCATTTCAAGATCCGGGTGAGGAAGATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS GCA 72 bp | GTTCTCGAACTTGTGAAACAAACACTCGGGATGAACTaGCACTATACAAGGCCACCGTACAAAAGCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VLELVKQTLGMN*HYTRPPYKSPS Trigger: AGAGGGGCTTTTGTACGGTGGCCTTGTATAGTGGCAGTTCATCCCGAGTGTTTGTTTCACAAGTTCGAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041422.15 |
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| CDS CAA 72 bp | GACGTTCATGGCACGGATCACATCATTGACACTGCTTaGCGAGTCATACAGGTCCAGGTGGCAAACAATGTA | + |
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Preference number: 6 (lower is better) Translates to: DVHGTDHIIDTA*RVIQVQVANNV Trigger: TACATTGTTTGCCACCTGGACCTGTATGACTCGCAAAGCAGTGTCAATGATGTGATCCGTGCCATGAACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CAA 72 bp | CAGAAGTCAACTTCAGGAGGGAATGAGATCTTGGGGTaGACGTTCATGGCACGGATCACATCATTGACACTG | + |
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Preference number: 6 (lower is better) Translates to: QKSTSGGNEILG*TFMARITSLTL Trigger: CAGTGTCAATGATGTGATCCGTGCCATGAACGTCAACCCCAAGATCTCATTCCCTCCTGAAGTTGACTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000113548.6 ENSMUST00000178631.6 |
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| CDS CAA 90 bp | ACCACTTTTCTCAGCAGACAGGACAGCTATCTCTTCCTTCAGATTTaGCAGATGTTTCTCATAGTTGGACACCACGTCTTGGGGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: TTFLSRQDSYLFLQI*QMFLIVGHHVLGPL Trigger: CAACGGCCCCAAGACGTGGTGTCCAACTATGAGAAACATCTGCAAAATCTGAAGGAAGAGATAGCTGTCCTGTCTGCTGAGAAAAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS CAA 90 bp | TTTTTAGCTGGTTTATCTCCTCCTCTGCAGCCAGGAGGGATATGGTaGATCCGTTCTTGGCTCCTTCAAGACTCTTTCCACTTTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: FLAGLSPPLQPGGIW*IRSWLLQDSFHFQP Trigger: TGGCTGAAAGTGGAAAGAGTCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGGAGGAGATAAACCAGCTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS CAA 72 bp | GCATTACTGGTCGCACGGAACTCCAAAAAGCCTCTTTaGGTGACAGCTTCTCCCTTCATAATGACACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ALLVARNSKKPL*VTASPFIMTQS Trigger: TGACTGTGTCATTATGAAGGGAGAAGCTGTCACCAAAAGAGGCTTTTTGGAGTTCCGTGCGACCAGTAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113548.6 |
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| CDS TCA 72 bp | ATGGCTACGCAGGAATGTACCGTGCTTATTCCAAAATaGTTACGAGGACAAATGGGGCTTAAGCTCCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: MATQECTVLIPK*LRGQMGLKLLL Trigger: TAGCAGGAGCTTAAGCCCCATTTGTCCTCGTAATCATTTTGGAATAAGCACGGTACATTCCTGCGTAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178631.6 |
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| CDS CAA 72 bp | CTCAGCAGACAGGACAGCTATCTCTTCCTTCAGATTTaGCAGATGTTTCTCATAGTTGGACACCACGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSRQDSYLFLQI*QMFLIVGHHVL Trigger: CAAGACGTGGTGTCCAACTATGAGAAACATCTGCAAAATCTGAAGGAAGAGATAGCTGTCCTGTCTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 ENSMUST00000178631.6 |
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| CDS CAA 90 bp | ATGTTGGTCCTGATCCGGAGAATTGTCTCTGTTTTTACTTCTAAGTaGGAAATCCTGTGTAGCACACATCTCAGACTCAGCCGTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: MLVLIRRIVSVFTSK*EILCSTHLRLSRFP Trigger: GGGAAAACGGCTGAGTCTGAGATGTGTGCTACACAGGATTTCCAACTTAGAAGTAAAAACAGAGACAATTCTCCGGATCAGGACCAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041422.15 ENSMUST00000071077.14 |
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