Pregenerated sensors for SPAST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024068Ensembl transcript IDs: ENSMUST00000024869.8, ENSMUST00000224711.2, ENSMUST00000225549.2, ENSMUST00000233554.2, ENSMUST00000233611.2
Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCGCAGAGAAGGAAGGATGACAATCTCCTGCAGCGCTTGCTTTaGCAGCTCCTGCCCGGCTATGTCATCAAACTTAACAGCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: RPQRRKDDNLLQRLL*QLLPGYVIKLNSCP Trigger: GGGACAGCTGTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR GCA 90 bp | CCTGTGAACAACTCAGGCCGCAGAGAAGGAAGGATGACAATCTCCTaGAGCGCTTGCTTTGCCAGCTCCTGCCCGGCTATGTCATCAAAC | + |
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Preference number: 1 (lower is better) Translates to: PVNNSGRREGRMTIS*SACFASSCPAMSSN Trigger: GTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCGGCCTGAGTTGTTCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CCA 90 bp | TCTCTGTGTAGGCCCCTGCCTTGGAACTCATTCTATAGGCCACGCTaGCCTCAAACTCAGAGACCTTGTCTCTGCCTTGAAGTGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: SLCRPLPWNSFYRPR*PQTQRPCLCLEVLG Trigger: TCCCAGCACTTCAAGGCAGAGACAAGGTCTCTGAGTTTGAGGCCAGCGTGGCCTATAGAATGAGTTCCAAGGCAGGGGCCTACACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR GCA 90 bp | AACTCAGGCCGCAGAGAAGGAAGGATGACAATCTCCTGCAGCGCTTaGTTTGCCAGCTCCTGCCCGGCTATGTCATCAAACTTAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: NSGRREGRMTISCSA*FASSCPAMSSNLTA Trigger: AGCTGTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCGGCCTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR TCA 90 bp | CACTACAGCTCTCACTGCAGATGGGAAGATTTCCACTTGGCACACTaGGCTGGTAAGGAAGCAGGAAGAGCTCAGAACGCTTGCTATCCC | + |
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Preference number: 1 (lower is better) Translates to: HYSSHCRWEDFHLAH*AGKEAGRAQNACYP Trigger: GGGATAGCAAGCGTTCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGAGCTGTAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR TCA 90 bp | GTTGGCCAGGTTAGCACTGACCTACTCTCAAGTAAAGGCAGGCCTTaGACTTGTGACCCTCTAGCCTTGGCCTTTCAAGCACCTTGGATC | + |
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Preference number: 1 (lower is better) Translates to: VGQVSTDLLSSKGRP*TCDPLALAFQAPWI Trigger: GATCCAAGGTGCTTGAAAGGCCAAGGCTAGAGGGTCACAAGTTCAAGGCCTGCCTTTACTTGAGAGTAGGTCAGTGCTAACCTGGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR GCA 90 bp | CCCAGCAACTTCTATCTGAAAAAGAGCAAACATCCTGATGTGGGATaGACACCAGCAGCACCCCCAGCACTTGGGAGATGCAGGCATGAA | + |
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Preference number: 1 (lower is better) Translates to: PSNFYLKKSKHPDVG*TPAAPPALGRCRHE Trigger: TTCATGCCTGCATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGCTCTTTTTCAGATAGAAGTTGCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR GCA 90 bp | CCTGATGTGGGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATaGAGGCATGAAGATCAGTTTAAGGTATTTATTTATAGGCTACCC | + |
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Preference number: 1 (lower is better) Translates to: PDVGCTPAAPPALGR*RHEDQFKVFIYRLP Trigger: GGGTAGCCTATAAATAAATACCTTAAACTGATCTTCATGCCTGCATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR GCA 90 bp | TCACTACCTGAGAACAGCTTCATCAAGCTCTTGGGGCCTGTTAGTTaGACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCC | + |
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Preference number: 1 (lower is better) Translates to: SLPENSFIKLLGPVS*THYKYSVISSRLHP Trigger: GGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCTGTTCTCAGGTAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR TCA 90 bp | ATTTGGAAATCCCAGCAACTTCTATCTGAAAAAGAGCAAACATCCTaGTGTGGGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: IWKSQQLLSEKEQTS*CGMHTSSTPSTWEM Trigger: CATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGCTCTTTTTCAGATAGAAGTTGCTGGGATTTCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR GCA 90 bp | GGCAGCACTTATGTTGAAAAAGGTCGCATTAGACTCTGCAGCTACTaGTTTAGCCAGCATTGTTTTTCCGTTTCCTGGCGGACCGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: GSTYVEKGRIRLCSY*FSQHCFSVSWRTEE Trigger: CTCTTCGGTCCGCCAGGAAACGGAAAAACAATGCTGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACCTTTTTCAACATAAGTGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CCA 90 bp | AAAATAAGTGCATCTCACTACCTGAGAACAGCTTCATCAAGCTCTTaGGGCCTGTTAGTTGCACCCATTACAAGTACTCTGTCATCTCCA | + |
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Preference number: 1 (lower is better) Translates to: KISASHYLRTASSSS*GLLVAPITSTLSSP Trigger: TGGAGATGACAGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCTGTTCTCAGGTAGTGAGATGCACTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CAA 90 bp | CAACTCAGGCCGCAGAGAAGGAAGGATGACAATCTCCTGCAGCGCTaGCTTTGCCAGCTCCTGCCCGGCTATGTCATCAAACTTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: QLRPQRRKDDNLLQR*LCQLLPGYVIKLNS Trigger: GCTGTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCGGCCTGAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGATTTCCACTTGGCACACTGAGCTGGTAAGGAAGCAGGAAGAGCTCAGACAGAAACCAGACTGCTaGAAGACAGACACCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GKISTWHTELVRKQEELRQKPDC*KTDTRR Trigger: TCTCCTGGTGTCTGTCTTGCAGCAGTCTGGTTTCTG...TCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCACTACAGCTCTCACTGCAGATGGGAAGATTTCCACTTGGCACACTGAGCAGCTCTTGTTTCCTGTaGAGTGCGATGTTCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: VSLQLSLQMGRFPLGTLSSSCFL*SAMFYG Trigger: CCCATAGAACATCGCACTTCACAGGAAACAAGAGCT...GCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGAGCTGTAGTGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAACATCCTGATGTGGGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATGAGAAAAACAGAATGTaGAAGAACCCACTAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ANILMWDAHQQHPQHLGDEKNRM*KNPLSV Trigger: GACACTTAGTGGGTTCTTTCACATTCTGTTTTTCTC...ATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGGCCTTTCAAGCACCTTGGATCATAAGGCTTGGCTGTTACTTTCTTCCATGCTTTGCCAGCTCCTaGCCGGCTATGTCATCAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALAFQAPWIIRLGCYFLPCFASS*PAMSSN Trigger: GTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCA...TGGAAGAAAGTAACAGCCAAGCCTTATGATCCAAGGTGCTTGAAAGGCCAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCTTCCAGAGGCCCCAAGTTCAATTCCCAGCACCCACATGGAGGTCAACATTGGGGCCTGTTAGTTaGACCCATTACAAGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: LFFQRPQVQFPAPTWRSTLGPVS*THYKYS Trigger: AGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAA...TGTTGACCTCCATGTGGGTGCTGGGAATTGAACTTGGGGCCTCTGGAAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGGCAGACCCTTCTTTCTTTATCTTAAGACTTATTCTCAAAAAGTTGGCCCTGCAGCGCTTGCTTTaGCAGCTCCTGCCCGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: PLADPSFFILRLILKKLALQRLL*QLLPGY Trigger: ATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAG...GGCCAACTTTTTGAGAATAAGTCTTAAGATAAAGAAAGAAGGGTCTGCCAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGAAACGTCTAACCACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGCTTCATCAAGCTCTTaGGGCCTGTTAGTTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: FETSNHRVIKRNPARMVLASSSS*GLLVAP Trigger: GGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGC...AAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTGGTTAGACGTTTCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CAA 90 bp | GCAAACATCCTGATGTGGGATGCACACCAGCAGCACCCCCAGCACTaGGGAGATGCAGGCATGAAGATCAGTTTAAGGTATTTATTTATA | + |
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Preference number: 2 (lower is better) Translates to: ANILMWDAHQQHPQH*GDAGMKISLRYLFI Trigger: TATAAATAAATACCTTAAACTGATCTTCATGCCTGCATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGGCCTTTCAAGCACCTTGGATCATAAGGCTTGGCTGTTACTTTCTTCCAAGGAAACACAGTCAGTaGGTCTCACAACAGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: ALAFQAPWIIRLGCYFLPRKHSQ*VSQQKH Trigger: ATGCTTCTGTTGTGAGACTCACTGACTGTGTTTCCT...TGGAAGAAAGTAACAGCCAAGCCTTATGATCCAAGGTGCTTGAAAGGCCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGTTTTTACTGTAGAAGCAGAGAAGGAAGGATaGCAATCTCCTGCAGCGCTT | + |
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Preference number: 2 (lower is better) Translates to: HRVIKRNPARMVLVFTVEAEKEG*QSPAAL Trigger: AAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGC...TTCTACAGTAAAAACAAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGTTTTTACTGTAGAAAGTAAAGGCAGGCCTTaGACTTGTGACCCTCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: HRVIKRNPARMVLVFTVESKGRP*TCDPLA Trigger: GGCTAGAGGGTCACAAGTTCAAGGCCTGCCTTTACT...TTCTACAGTAAAAACAAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGTTTTTACTGTAGAAGGTCGCATTAGACTCTaGAGCTACTGCTTTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: HRVIKRNPARMVLVFTVEGRIRL*SYCFSQ Trigger: CTGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACC...TTCTACAGTAAAAACAAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTAAGTGCGATGTTCTATaGGCTCACAGAGGCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: TLKRPVNEVWVPVAKALVKCDVL*AHRGIH Trigger: ATGGATGCCTCTGTGAGCCCATAGAACATCGCACTT...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTAAGTGCGATGTTCTATaGGCTCACAGAGGCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: MKTLKRPVNEVWVPVAKAKCDVL*AHRGIH Trigger: ATGGATGCCTCTGTGAGCCCATAGAACATCGCACTT...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGAAACGTCTAACCACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTAGAGAGATGGCTCAATaGTTAAGAGTACAGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: FETSNHRVIKRNPARMVLREMAQ*LRVQAV Trigger: AACAGCCTGTACTCTTAACCATTGAGCCATCTCTCT...AAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTGGTTAGACGTTTCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CAA 90 bp | TCTCCTTCTCCCACATATTTTGAAGTTAAACTGGCAGCACTTATGTaGAAAAAGGTCGCATTAGACTCTGCAGCTACTGCTTTAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SPSPTYFEVKLAALM*KKVALDSAATALAS Trigger: GCTGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAGTTTAACTTCAAAATATGTGGGAGAAGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CAA 90 bp | TTGGCAGACCCTTCTTTCTTTATCTTAAGACTTATTCTCAAAAAGTaGGCCAGGTTAGCACTGACCTACTCTCAAGTAAAGGCAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LADPSFFILRLILKK*ARLALTYSQVKAGL Trigger: AAGGCCTGCCTTTACTTGAGAGTAGGTCAGTGCTAACCTGGCCAACTTTTTGAGAATAAGTCTTAAGATAAAGAAAGAAGGGTCTGCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTCACGCAAGAAGGCCTTaGACAAAAATTCCATTCATA | + |
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Preference number: 2 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFHARRP*TKIPFI Trigger: TATGAATGGAATTTTTGTTCAAGGCCTTCTTGCGTG...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTTCTTACATGAGATGTTaGTGTTGCTACCACAGAATT | + |
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Preference number: 2 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFSYMRC*CCYHRI Trigger: AATTCTGTGGTAGCAACACCAACATCTCATGTAAGA...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR GCA 72 bp | CGCAGAGAAGGAAGGATGACAATCTCCTGCAGCGCTTaGTTTGCCAGCTCCTGCCCGGCTATGTCATCAAAC | + |
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Preference number: 3 (lower is better) Translates to: RREGRMTISCSA*FASSCPAMSSN Trigger: GTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR CAA 90 bp | TTCGAAACGTCTAACCACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTCCTGCAGCGCTTGCTTaGCCAGCTCCTGCCCGGCTA | + |
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Preference number: 3 (lower is better) Translates to: FETSNHRVIKRNPARMVLPAALA*PAPARL Trigger: TAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGG...AAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTGGTTAGACGTTTCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR TCA 72 bp | ACGCTGGCCTCAAACTCAGAGACCTTGTCTCTGCCTTaGAGTGCTGGGATTAAAGGAGTGCGCCATCACCTC | + |
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Preference number: 3 (lower is better) Translates to: TLASNSETLSLP*SAGIKGVRHHL Trigger: GAGGTGATGGCGCACTCCTTTAATCCCAGCACTTCAAGGCAGAGACAAGGTCTCTGAGTTTGAGGCCAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR CAA 90 bp | GCACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCCGTCAAATTCTAATCTCCTGCAGCGCTaGCTTTGCCAGCTCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: APITSTLSSPADCTPSNSNLLQR*LCQLLP Trigger: GGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATT...AGAATTTGACGGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR GCA 72 bp | ATGACAATCTCCTGCAGCGCTTGCTTTGCCAGCTCCTaGCCGGCTATGTCATCAAACTTAACAGCTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: MTISCSACFASS*PAMSSNLTAVP Trigger: TGGGACAGCTGTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR CAA 90 bp | CCGTCTGCTAGCGTCGTGCTCCCCTTCCCGTCTCTCACACAAAAGACTGTCAACCTGGCAGCACTTATGTaGAAAAAGGTCGCATTAGAC | + |
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Preference number: 3 (lower is better) Translates to: PSASVVLPFPSLTQKTVNLAALM*KKVALD Trigger: GTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAG...GTTGACAGTCTTTTGTGTGAGAGACGGGAAGGGGAGCACGACGCTAGCAGACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR TCA 72 bp | TCTCACTGCAGATGGGAAGATTTCCACTTGGCACACTaGGCTGGTAAGGAAGCAGGAAGAGCTCAGAACGCT | + |
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Preference number: 3 (lower is better) Translates to: SHCRWEDFHLAH*AGKEAGRAQNA Trigger: AGCGTTCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR TCA 72 bp | TCCCAGCAACTTCTATCTGAAAAAGAGCAAACATCCTaGTGTGGGATGCACACCAGCAGCACCCCCAGCACT | + |
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Preference number: 3 (lower is better) Translates to: SQQLLSEKEQTS*CGMHTSSTPST Trigger: AGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGCTCTTTTTCAGATAGAAGTTGCTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR GCA 72 bp | TTCTATCTGAAAAAGAGCAAACATCCTGATGTGGGATaGACACCAGCAGCACCCCCAGCACTTGGGAGATGC | + |
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Preference number: 3 (lower is better) Translates to: FYLKKSKHPDVG*TPAAPPALGRC Trigger: GCATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGCTCTTTTTCAGATAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR GCA 72 bp | AGAAGGAAGGATGACAATCTCCTGCAGCGCTTGCTTTaGCAGCTCCTGCCCGGCTATGTCATCAAACTTAAC | + |
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Preference number: 3 (lower is better) Translates to: RRKDDNLLQRLL*QLLPGYVIKLN Trigger: GTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CCA 72 bp | ACTACAGCTCTCACTGCAGATGGGAAGATTTCCACTTaGCACACTGAGCTGGTAAGGAAGCAGGAAGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: TTALTADGKIST*HTELVRKQEEL Trigger: GAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGAGCTGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| 3UTR TCA 72 bp | GTTAGCACTGACCTACTCTCAAGTAAAGGCAGGCCTTaGACTTGTGACCCTCTAGCCTTGGCCTTTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: VSTDLLSSKGRP*TCDPLALAFQA Trigger: TGCTTGAAAGGCCAAGGCTAGAGGGTCACAAGTTCAAGGCCTGCCTTTACTTGAGAGTAGGTCAGTGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR TCA 72 bp | CACATATACACACTGACTGTGGAGGCCAGAAGATGTTaGATCCCCTGGAACTGGAGTCACGGTTGTGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: HIYTLTVEARRC*IPWNWSHGCES Trigger: TGACTCACAACCGTGACTCCAGTTCCAGGGGATTCAACATCTTCTGGCCTCCACAGTCAGTGTGTATATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR GCA 72 bp | CCTTGTCTCTGCCTTGAAGTGCTGGGATTAAAGGAGTaGGCCATCACCTCCCAGCATGGTTATGGTTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: PCLCLEVLGLKE*AITSQHGYGFK Trigger: CTTAAAACCATAACCATGCTGGGAGGTGATGGCGCACTCCTTTAATCCCAGCACTTCAAGGCAGAGACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCTTCCAGAGGCCCCAAGTTCAATTCCCAGCACCCACATGGAGGTCAACACTTCTCCCACATATTTaGAAGTTAAACTGGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LFFQRPQVQFPAPTWRSTLLPHI*KLNWQH Trigger: GTGCTGCCAGTTTAACTTCAAAATATGTGGGAGAAG...TGTTGACCTCCATGTGGGTGCTGGGAATTGAACTTGGGGCCTCTGGAAGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR CCA 72 bp | GCATCTCACTACCTGAGAACAGCTTCATCAAGCTCTTaGGGCCTGTTAGTTGCACCCATTACAAGTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASHYLRTASSSS*GLLVAPITSTL Trigger: CAGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCTGTTCTCAGGTAGTGAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR CCA 72 bp | ACTTGTGACCCTCTAGCCTTGGCCTTTCAAGCACCTTaGATCATAAGGCTTGGCTGTTACTTTCTTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TCDPLALAFQAP*IIRLGCYFLPA Trigger: AGCTGGAAGAAAGTAACAGCCAAGCCTTATGATCCAAGGTGCTTGAAAGGCCAAGGCTAGAGGGTCACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR TCA 72 bp | CCTCTGGAAGAACAGCCAGGGAATATTCTTAACTGTTaGGCCATCTCACCAGCCCCAACAAACTGTTTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: PLEEQPGNILNC*AISPAPTNCFR Trigger: TCGAAAACAGTTTGTTGGGGCTGGTGAGATGGCTCAACAGTTAAGAATATTCCCTGGCTGTTCTTCCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR GCA 72 bp | GGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATaGAGGCATGAAGATCAGTTTAAGGTATTTATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GCTPAAPPALGR*RHEDQFKVFIY Trigger: ATAAATAAATACCTTAAACTGATCTTCATGCCTGCATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGATTTCCACTTGGCACACTGAGCTGGTAAGGAAGCAGGAAGAGCTCAGATGTTCCTCTTCAAGTTaGGTGCACAAAAATGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GKISTWHTELVRKQEELRCSSSS*VHKNEN Trigger: GTTTTCATTTTTGTGCACCAAACTTGAAGAGGAACA...TCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| 3UTR TCA 72 bp | ACCTACGACCTGATGAACAGAGGTGCTTCTCTACAGTaGGTGATGGACAGTCACACAGCAATAACTTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TYDLMNRGASLQ*VMDSHTAITLS Trigger: ACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCTCTGTTCATCAGGTCGTAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| 3UTR TCA 72 bp | GGGTCATACAGCATCACAGAAAACATTAACAGGAGCTaGACCTACGACCTGATGAACAGAGGTGCTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GSYSITENINRS*TYDLMNRGASL Trigger: TAGAGAAGCACCTCTGTTCATCAGGTCGTAGGTTCAGCTCCTGTTAATGTTTTCTGTGATGCTGTATGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| 3UTR GCA 72 bp | TATGTTGAAAAAGGTCGCATTAGACTCTGCAGCTACTaGTTTAGCCAGCATTGTTTTTCCGTTTCCTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: YVEKGRIRLCSY*FSQHCFSVSWR Trigger: CCGCCAGGAAACGGAAAAACAATGCTGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACCTTTTTCAACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR CCA 72 bp | AGCCTTGGCCTTTCAAGCACCTTGGATCATAAGGCTTaGCTGTTACTTTCTTCCAGCTCTCTAGTTAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLGLSSTLDHKA*LLLSSSSLVNA Trigger: AGCATTAACTAGAGAGCTGGAAGAAAGTAACAGCCAAGCCTTATGATCCAAGGTGCTTGAAAGGCCAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCGAAACGTCTAACCACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTCTCACAACAGAAGCATaGTTCAGGTACTTAAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: FETSNHRVIKRNPARMVLLTTEA*FRYLNV Trigger: CACGTTTAAGTACCTGAACAATGCTTCTGTTGTGAG...AAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTGGTTAGACGTTTCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR GCA 72 bp | GGCAGCACTTATGTTGAAAAAGGTCGCATTAGACTCTaGAGCTACTGCTTTAGCCAGCATTGTTTTTCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: GSTYVEKGRIRL*SYCFSQHCFSV Trigger: AACGGAAAAACAATGCTGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACCTTTTTCAACATAAGTGCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR GCA 72 bp | ACTTATGGCCTCATGTATGCTAGACAACCCCTTTTCTaGAGATTTAATCCCTTGGCAGACCCTTCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TYGLMYARQPLF*RFNPLADPSFF Trigger: AAAGAAAGAAGGGTCTGCCAAGGGATTAAATCTGCAGAAAAGGGGTTGTCTAGCATACATGAGGCCATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTGGCAGACCCTTCTTTCTTTATCTTAAGACTTATTCTCAAAAAGTTGGCCAAAAATTATAGATGGTaGAAGTTCTCGAGCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLADPSFFILRLILKKLAKNYRW*KFSSHS Trigger: GCTGTGGCTCGAGAACTTCAACCATCTATAATTTTT...GGCCAACTTTTTGAGAATAAGTCTTAAGATAAAGAAAGAAGGGTCTGCCAAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR TCA 72 bp | AGACTGTCAACTTCATCTATAAAAATTATAGATGGTTaGAGTTCTCGAGCCACAGCAAAGAGAGCTCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RLSTSSIKIIDG*SSRATAKRALT Trigger: GGTGAGAGCTCTCTTTGCTGTGGCTCGAGAACTTCAACCATCTATAATTTTTATAGATGAAGTTGACAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGAGATGCAGGCATGAAGATCAGTTTAAGGTATTTATTTATAGGCTACCCATCACGCAAGAAGGCCTaGAACAAAAATTCCATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LGDAGMKISLRYLFIGYPSRKKA*NKNSIH Trigger: ATGAATGGAATTTTTGTTCAAGGCCTTCTTGCGTGA...TGGGTAGCCTATAAATAAATACCTTAAACTGATCTTCATGCCTGCATCTCCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| 3UTR GCA 72 bp | ACTGATGCATTAACATTTGAGACCTTAAAAAGACACTaGCCACAACAAAAACTATGCACAGCTTTGGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TDALTFETLKRH*PQQKLCTALVK Trigger: TTTAACCAAAGCTGTGCATAGTTTTTGTTGTGGGCAGTGTCTTTTTAAGGTCTCAAATGTTAATGCATCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACATCCTGATGTGGGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATGCGCGGGAGAAGCGCTaGCAGAGCCACGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANILMWDAHQQHPQHLGDAREKR*QSHAKR Trigger: CCTCTTCGCGTGGCTCTGCCAGCGCTTCTCCCGCGC...ATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGCTGTTCTTCCAGAGGCCCCAAGTTCAATTCCCAGCACCCACATGGAGGTCCTCTTGGCGGCCATaGGGGCGCGGGAGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRLFFQRPQVQFPAPTWRSSWRP*GRGRSA Trigger: AGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGA...CCTCCATGTGGGTGCTGGGAATTGAACTTGGGGCCTCTGGAAGAACAGCCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR TCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCTCCTCTTGGCGGCCATaGGGGCGCGGGAGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSSSWRP*GRGRSA Trigger: AGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGA...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCGCGCGGGAGAAGCGCTaGCAGAGCCACGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSAREKR*QSHAKR Trigger: CCTCTTCGCGTGGCTCTGCCAGCGCTTCTCCCGCGC...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | TTCGAAACGTCTAACCACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGCGCGGGAGAAGCGCTaGCAGAGCCACGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHRVIKRNPARMVLAREKR*QSHAKR Trigger: CCTCTTCGCGTGGCTCTGCCAGCGCTTCTCCCGCGC...AAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTGGTTAGACGTTTCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR TCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTCCTCTTGGCGGCCATaGGGGCGCGGGAGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCSSWRP*GRGRSA Trigger: AGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGA...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGATTTCCACTTGGCACACTGAGCTGGTAAGGAAGCAGGAAGAGCTCAGACCAGGGCTGCATCCTTaGCCAAAGCGGTCAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKISTWHTELVRKQEELRPGLHP*PKRSDH Trigger: GTGATCTGACCGCTTTGGCCAAGGATGCAGCCCTGG...TCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTTCCAGAGGCCCCAAGTTCAATTCCCAGCACCCACATGGAGGTCAACAAACTGCTCCACTTTCTaGCTGGAGATGTCCATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LFFQRPQVQFPAPTWRSTNCSTF*LEMSIA Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCAGTT...TGTTGACCTCCATGTGGGTGCTGGGAATTGAACTTGGGGCCTCTGGAAGAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | TTCGAAACGTCTAACCACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGTGACCGGAGAGCCCTaGGGAGCCACTTTTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHRVIKRNPARMVLVTGEP*GATFQD Trigger: GTCCTGAAAAGTGGCTCCGCAGGGCTCTCCGGTCAC...AAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTGGTTAGACGTTTCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCACTACAGCTCTCACTGCAGATGGGAAGATTTCCACTTGGCACACTGAGCACCAGGTCCCGGTCTTaGTCCAGAAACCATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLQLSLQMGRFPLGTLSTRSRS*SRNHGQ Trigger: TTGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGT...GCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGAGCTGTAGTGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGTTGCACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCCGTCCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCTHYKYSVISSRLHPVRCAGQ*RCTRRP Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...GACGGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCAACTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTGGCCTTTCAAGCACCTTGGATCATAAGGCTTGGCTGTTACTTTCTTCCAATGTACTCGAAGGCCTaGTTGTGGAAGACGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: ALAFQAPWIIRLGCYFLPMYSKA*LWKTRT Trigger: CGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACAT...TGGAAGAAAGTAACAGCCAAGCCTTATGATCCAAGGTGCTTGAAAGGCCAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTGTGACCGGAGAGCCCTaGGGAGCCACTTTTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCVTGEP*GATFQD Trigger: GTCCTGAAAAGTGGCTCCGCAGGGCTCTCCGGTCAC...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGACTCTGCAGCTACTGCTTTAGCCAGCATTGTTTTTCCGTTTCCTGGCGGCTTATGTGTGGTAGCTaGAGGACCAGGTCCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRLCSYCFSQHCFSVSWRLMCGS*RTRSRS Trigger: AGACCGGGACCTGGTCCTGCAGCTACCACACATAAG...CCGCCAGGAAACGGAAAAACAATGCTGGCTAAAGCAGTAGCTGCAGAGTCTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTCTGCAGCGCTTGCTTTaGCAGCTCCTGCCCGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCLQRLL*QLLPGY Trigger: ATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAG...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGATTTCCACTTGGCACACTGAGCTGGTAAGGAAGCAGGAAGAGCTCAGAGGTCGCATTAGACTCTaGAGCTACTGCTTTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKISTWHTELVRKQEELRGRIRL*SYCFSQ Trigger: CTGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACC...TCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR TCA 90 bp | GTACAGGCTGTTCTTCCAGAGGCCCCAAGTTCAATTCCCAGCACCCACATGGAGATAGACGTCCGTCTGTaGCTTGGAAAATTGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQAVLPEAPSSIPSTHMEIDVRL*LGKLQN Trigger: GTTTTGCAATTTTCCAAGTCACAGACGGACGTCTAT...CTCCATGTGGGTGCTGGGAATTGAACTTGGGGCCTCTGGAAGAACAGCCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCGTGACCGGAGAGCCCTaGGGAGCCACTTTTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NENSKTSCKRSLGSCSQSVTGEP*GATFQD Trigger: GTCCTGAAAAGTGGCTCCGCAGGGCTCTCCGGTCAC...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCCTTATGTGTGGTAGCTaGAGGACCAGGTCCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSLMCGS*RTRSRS Trigger: AGACCGGGACCTGGTCCTGCAGCTACCACACATAAG...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTCTGCAGCGCTTGCTTTaGCAGCTCCTGCCCGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLKRPVNEVWVPVAKALLQRLL*QLLPGY Trigger: ATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAG...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTGATAGGACCCAGGGCTaGATCCTTGGCCAAAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCDRTQG*ILGQSG Trigger: ACCGCTTTGGCCAAGGATGCAGCCCTGGGTCCTATC...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTTCGAAGGCCTGCTTGTaGAAGACGCGGACGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFSKACL*KTRTLS Trigger: CGAGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGA...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTTCGAAGGCCTGCTTGTaGAAGACGCGGACGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KTLKRPVNEVWVPVAKALSKACL*KTRTLS Trigger: CGAGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGA...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTCCAGGGCTGCATCCTTaGCCAAAGCGGTCAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCPGLHP*PKRSDH Trigger: GTGATCTGACCGCTTTGGCCAAGGATGCAGCCCTGG...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCGCAGAGAAGGAAGGATaGCAATCTCCTGCAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSAEKEG*QSPAAL Trigger: AAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGC...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTATGTACTCGAAGGCCTaGTTGTGGAAGACGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TLKRPVNEVWVPVAKALVMYSKA*LWKTRT Trigger: CGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACAT...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCTGCTTTGCCAGCTCCTaGCCGGCTATGTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSCFASS*PAMSSN Trigger: GTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCA...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTGATAGGACCCAGGGCTaGATCCTTGGCCAAAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFDRTQG*ILGQSG Trigger: ACCGCTTTGGCCAAGGATGCAGCCCTGGGTCCTATC...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCRCAGQ*RCTRRP Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTATGTACTCGAAGGCCTaGTTGTGGAAGACGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKAMYSKA*LWKTRT Trigger: CGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACAT...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTCTCTTCCTCGTCGATaGGCAGGGCAATGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCSLPRR*AGQWRC Trigger: ACATCTCCATTGCCCTGCGCATCGACGAGGAAGAGA...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTATGTGTGGTAGCTaGAGGACCAGGTCCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKALMCGS*RTRSRS Trigger: AGACCGGGACCTGGTCCTGCAGCTACCACACATAAG...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTLKRPVNEVWVPVAKALRCAGQ*RCTRRP Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSAPLSD*RCPLRH Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTGCTTCATCAAGCTCTTaGGGCCTGTTAGTTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKRPVNEVWVPVAKALVASSSS*GLLVAP Trigger: GGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGC...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTGCAGAGAAGGAAGGATaGCAATCTCCTGCAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFAEKEG*QSPAAL Trigger: AAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGC...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTTCTCTTCCTCGTCGATaGGCAGGGCAATGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKASLPRR*AGQWRC Trigger: ACATCTCCATTGCCCTGCGCATCGACGAGGAAGAGA...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCACTACAGCTCTCACTGCAGATGGGAAGATTTCCACTTGGCACACTGAGCTGTGACTTGGAAAATTaGAAAACTGGTTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLQLSLQMGRFPLGTLSCDLEN*KTGCSF Trigger: GAAGCTGCAACCAGTTTTGCAATTTTCCAAGTCACA...GCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGAGCTGTAGTGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTACCAGGTCCCGGTCTTaGTCCAGAAACCATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKATRSRS*SRNHGQ Trigger: TTGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGT...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTGGTCGCATTAGACTCTaGAGCTACTGCTTTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKRPVNEVWVPVAKALVGRIRL*SYCFSQ Trigger: CTGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACC...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGTTGCACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCCGTCCGTCCGTCTGTGACTTaGAAAATTGCAAAACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSCTHYKYSVISSRLHPVRPSVT*KIAKLV Trigger: AACCAGTTTTGCAATTTTCCAAGTCACAGACGGACG...GACGGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCAACTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGACAACCCCTTTTCTGCAGATTTAATCCCTTGGCAGACCCTTCTTTCTTTGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARQPLFCRFNPLADPSFFAPLSD*RCPLRH Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...AAAGAAAGAAGGGTCTGCCAAGGGATTAAATCTGCAGAAAAGGGGTTGTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCGCTTCATCAAGCTCTTaGGGCCTGTTAGTTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: NENSKTSCKRSLGSCSQSASSSS*GLLVAP Trigger: GGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGC...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTAACTGCTCCACTTTCTaGCTGGAGATGTCCATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KTLKRPVNEVWVPVAKALNCSTF*LEMSIA Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCAGTT...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCAACTGCTCCACTTTCTaGCTGGAGATGTCCATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NENSKTSCKRSLGSCSQSNCSTF*LEMSIA Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCAGTT...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | GCACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCCGTCAAATTCTTTTCTTTTTCCGAACTaGAGTTGTGGGAGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: APITSTLSSPADCTPSNSFLFPN*SCGSRR Trigger: CCTTCTACTCCCACAACTGCAGTTCGGAAAAAGAAA...AGAATTTGACGGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTGACATATTCTTCACCTaGTCTGGCTTCAGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKRPVNEVWVPVAKALVDIFFT*SGFSSR Trigger: CCGAGAACTGAAGCCAGAGCAGGTGAAGAATATGTC...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCTGTGCGAGTTCTTTTTaGGTCAGTGGACTTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSCASSF*VSGLPC Trigger: ACAAGGAAGTCCACTGACCCAAAAAGAACTCGCACA...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCGTCATCATTTTGGCTTaGAGACGTCTAGCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSVIILA*RRLALS Trigger: TGAAAGAGCTAGACGTCTTCAAGCCAAAATGATGAC...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCATAGACGTCCGTCTGTaGCTTGGAAAATTGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSIDVRL*LGKLQN Trigger: GTTTTGCAATTTTCCAAGTCACAGACGGACGTCTAT...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCTTTCTTTTTCCGAACTaGAGTTGTGGGAGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSFLFPN*SCGSRR Trigger: CCTTCTACTCCCACAACTGCAGTTCGGAAAAAGAAA...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTCATTCTAGCAAGCTGTaGGAGTTCTTTTTGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKRPVNEVWVPVAKALVHSSKL*EFFLGQ Trigger: CTGACCCAAAAAGAACTCGCACAGCTTGCTAGAATG...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTGACATATTCTTCACCTaGTCTGGCTTCAGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKADIFFT*SGFSSR Trigger: CCGAGAACTGAAGCCAGAGCAGGTGAAGAATATGTC...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTGTGCGAGTTCTTTTTaGGTCAGTGGACTTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCCASSF*VSGLPC Trigger: ACAAGGAAGTCCACTGACCCAAAAAGAACTCGCACA...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTTGGGGCCTGTTAGTTaGACCCATTACAAGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NENSKTSCKRSLGSCSQSLGPVS*THYKYS Trigger: AGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAA...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTTTGGGGCCTGTTAGTTaGACCCATTACAAGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKALGPVS*THYKYS Trigger: AGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAA...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCATTCTAGCAAGCTGTaGGAGTTCTTTTTGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKAHSSKL*EFFLGQ Trigger: CTGACCCAAAAAGAACTCGCACAGCTTGCTAGAATG...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGATGCAGGCATGAAGATCAGTTTAAGGTATTTATTTATAGGCTACCCAGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGDAGMKISLRYLFIGYPAPLSD*RCPLRH Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...TGGGTAGCCTATAAATAAATACCTTAAACTGATCTTCATGCCTGCATCTCCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTGTCATCATTTTGGCTTaGAGACGTCTAGCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFVIILA*RRLALS Trigger: TGAAAGAGCTAGACGTCTTCAAGCCAAAATGATGAC...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR TCA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTATAGACGTCCGTCTGTaGCTTGGAAAATTGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLKRPVNEVWVPVAKALIDVRL*LGKLQN Trigger: GTTTTGCAATTTTCCAAGTCACAGACGGACGTCTAT...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTAAAATTATAGATGGTTaGAGTTCTCGAGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCKIIDG*SSRATA Trigger: TGCTGTGGCTCGAGAACTTCAACCATCTATAATTTT...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTAAAATTATAGATGGTTaGAGTTCTCGAGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLKRPVNEVWVPVAKALVKIIDG*SSRATA Trigger: TGCTGTGGCTCGAGAACTTCAACCATCTATAATTTT...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTGTGACTTGGAAAATTaGAAAACTGGTTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLKRPVNEVWVPVAKALVCDLEN*KTGCSF Trigger: GAAGCTGCAACCAGTTTTGCAATTTTCCAAGTCACA...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | ACATATTTTGAAGTTAAACTGGCAGCACTTATGTTGAAAAAGGTCGCATTAGACACCAGGTCCCGGTCTTaGTCCAGAAACCATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TYFEVKLAALMLKKVALDTRSRS*SRNHGQ Trigger: TTGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGT...GTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAGTTTAACTTCAAAATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTTTTCTTTTTCCGAACTaGAGTTGTGGGAGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKAFLFPN*SCGSRR Trigger: CCTTCTACTCCCACAACTGCAGTTCGGAAAAAGAAA...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTCGTCCGTCTGTGACTTaGAAAATTGCAAAACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLKRPVNEVWVPVAKALRPSVT*KIAKLV Trigger: AACCAGTTTTGCAATTTTCCAAGTCACAGACGGACG...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | GCACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCCGTCAAATTCTTTTGTTGGTTCTATTTaGTTTTGGAGTACCCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: APITSTLSSPADCTPSNSFVGSI*FWSTLM Trigger: CATAAGGGTACTCCAAAACCAAATAGAACCAACAAA...AGAATTTGACGGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| 3UTR CAA 72 bp | CCCACATATTTTGAAGTTAAACTGGCAGCACTTATGTaGAAAAAGGTCGCATTAGACTCTGCAGCTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTYFEVKLAALM*KKVALDSAATA Trigger: AGCAGTAGCTGCAGAGTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAGTTTAACTTCAAAATATGTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCTTTGTTGGTTCTATTTaGTTTTGGAGTACCCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LKRPVNEVWVPVAKALVSFVGSI*FWSTLM Trigger: CATAAGGGTACTCCAAAACCAAATAGAACCAACAAA...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTGGCAGACCCTTCTTTCTTTATCTTAAGACTTATTCTCAAAAAGTTGGCCTGTGACTTGGAAAATTaGAAAACTGGTTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLADPSFFILRLILKKLACDLEN*KTGCSF Trigger: GAAGCTGCAACCAGTTTTGCAATTTTCCAAGTCACA...GGCCAACTTTTTGAGAATAAGTCTTAAGATAAAGAAAGAAGGGTCTGCCAAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTTATTTCTCATCTCACTaGCAGACATATTCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MKTLKRPVNEVWVPVAKAYFSSH*QTYSSP Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTATTTCTCATCTCACTaGCAGACATATTCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NENSKTSCKRSLGSCSQSYFSSH*QTYSSP Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| 3UTR CAA 72 bp | CCCACGTTATGTAGCTGTATGCACCCTTTAAGTCATTaGCTTCGCAGAAGTAAAAGTAAGACTAAAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLCSCMHPLSH*LRRSKSKTKTE Trigger: CTCAGTTTTAGTCTTACTTTTACTTCTGCGAAGCAAATGACTTAAAGGGTGCATACAGCTACATAACGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTTTTGTTGGTTCTATTTaGTTTTGGAGTACCCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: KTLKRPVNEVWVPVAKALFVGSI*FWSTLM Trigger: CATAAGGGTACTCCAAAACCAAATAGAACCAACAAA...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| 3UTR CAA 72 bp | AAGACTGTCAACTTCATCTATAAAAATTATAGATGGTaGAAGTTCTCGAGCCACAGCAAAGAGAGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KTVNFIYKNYRW*KFSSHSKESSH Trigger: GTGAGAGCTCTCTTTGCTGTGGCTCGAGAACTTCAACCATCTATAATTTTTATAGATGAAGTTGACAGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CAA 72 bp | CCTTCTTTCTTTATCTTAAGACTTATTCTCAAAAAGTaGGCCAGGTTAGCACTGACCTACTCTCAAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSFFILRLILKK*ARLALTYSQVK Trigger: CTTTACTTGAGAGTAGGTCAGTGCTAACCTGGCCAACTTTTTGAGAATAAGTCTTAAGATAAAGAAAGAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| 3UTR CAA 72 bp | TATGCTAGACAACCCCTTTTCTGCAGATTTAATCCCTaGGCAGACCCTTCTTTCTTTATCTTAAGACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: YARQPLFCRFNP*ADPSFFILRLI Trigger: AATAAGTCTTAAGATAAAGAAAGAAGGGTCTGCCAAGGGATTAAATCTGCAGAAAAGGGGTTGTCTAGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| CDS TCA 90 bp | GCGAGGCGGGCGCCGGCGCGGTCCCGGAGCTCCTCTTGGCGGCCATaGGGGCGCGGGAGAAGCGCTGGCAGAGCCACGCGAAGAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARRAPARSRSSSWRP*GRGRSAGRATRRGA Trigger: GGCTCCTCTTCGCGTGGCTCTGCCAGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGAGCTCCGGGACCGCGCCGGCGCCCGCCTCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
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| CDS CCA 90 bp | GTCCCGGAGCTCCTCTTGGCGGCCATGAGGGCGCGGGAGAAGCGCTaGCAGAGCCACGCGAAGAGGAGCCCCAGGTGGCAGGCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPELLLAAMRAREKR*QSHAKRSPRWQASR Trigger: CCTGCTGGCCTGCCACCTGGGGCTCCTCTTCGCGTGGCTCTGCCAGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGAGCTCCGGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
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| CDS CCA 90 bp | TCGTCGATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTGCTTGTaGAAGACGCGGACGCTCTCGGCCTCGCCACCCGGTCCGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSMRRAMEMYSKACL*KTRTLSASPPGPGS Trigger: AGAGCCCGGACCGGGTGGCGAGGCCGAGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGACGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
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| CDS GCA 90 bp | TCTTCCTCGTCGATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTaGTTGTGGAAGACGCGGACGCTCTCGGCCTCGCCACCCGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSMRRAMEMYSKA*LWKTRTLSASPPGP Trigger: CGGACCGGGTGGCGAGGCCGAGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGACGAGGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
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| CDS-3UTR CAA 90 bp | CCGTCTGCTAGCGTCGTGCTCCCCTTCCCGTCTCTCACACAAAAGACTGTCAACGTCCCGGAGCTCCTCTaGGCGGCCATGAGGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSASVVLPFPSLTQKTVNVPELL*AAMRAR Trigger: CCGCGCCCTCATGGCCGCCAAGAGGAGCTCCGGGAC...GTTGACAGTCTTTTGTGTGAGAGACGGGAAGGGGAGCACGACGCTAGCAGACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGATTTCCACTTGGCACACTGAGCTGGTAAGGAAGCAGGAAGAGCTCAGAGTCCCGGAGCTCCTCTaGGCGGCCATGAGGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GKISTWHTELVRKQEELRVPELL*AAMRAR Trigger: CCGCGCCCTCATGGCCGCCAAGAGGAGCTCCGGGAC...TCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| CDS-3UTR CAA 90 bp | GCAAACATCCTGATGTGGGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATTACTCGAAGGCCTGCTaGTGGAAGACGCGGACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ANILMWDAHQQHPQHLGDYSKAC*WKTRTL Trigger: GAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTA...ATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| CDS GCA 90 bp | TGGAGTACCCTTATGTGTGGTAGCTGCAGGACCAGGTCCCGGTCTTaGTCCAGAAACCATGGACAAACCACTGCAACTAGGCGCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSTLMCGSCRTRSRS*SRNHGQTTATRRPV Trigger: CACAGGGCGCCTAGTTGCAGTGGTTTGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGTCCTGCAGCTACCACACATAAGGGTACTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS-3UTR CAA 90 bp | GTACAGGCTGTTCTTCCAGAGGCCCCAAGTTCAATTCCCAGCACCCACATGGAGGACCAGGTCCCGGTCTaGCTCCAGAAACCATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VQAVLPEAPSSIPSTHMEDQVPV*LQKPWT Trigger: TGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGTC...CTCCATGTGGGTGCTGGGAATTGAACTTGGGGCCTCTGGAAGAACAGCCTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| CDS TCA 90 bp | GCTCCAGAAACCATGGACAAACCACTGCAACTAGGCGCCCTGTGGTaGCCGGAGAGCCCTGCGGAGCCACTTTTCAGGACAGTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: APETMDKPLQLGALW*PESPAEPLFRTVFD Trigger: ATCAAAAACTGTCCTGAAAAGTGGCTCCGCAGGGCTCTCCGGTCACCACAGGGCGCCTAGTTGCAGTGGTTTGTCCATGGTTTCTGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS GCA 90 bp | GCCTCAGGCCGCAGAGAAGGAAGGATGACAATCTCCTGCAGCGCTTaGTTTGCCAGCTCCTGCCCGGCTATGTCATCAAACTTAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASGRREGRMTISCSA*FASSCPAMSSNLTA Trigger: AGCTGTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCGGCCTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233554.2 |
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| CDS GCA 90 bp | ACTGCTTTAGCCTCAGGCCGCAGAGAAGGAAGGATGACAATCTCCTaGAGCGCTTGCTTTGCCAGCTCCTGCCCGGCTATGTCATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TALASGRREGRMTIS*SACFASSCPAMSSN Trigger: GTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCGGCCTGAGGCTAAAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233554.2 |
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| CDS CCA 90 bp | CTTGTTCCTTCTGTCCTTTCTCTTCCTCGTCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGCTTGTGGAAGACGCGGACGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVPSVLSLPRRCAGQ*RCTRRPACGRRGRS Trigger: AGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGACGAGGAAGAGAAAGGACAGAAGGAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS-3UTR CAA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCGTCCCGGAGCTCCTCTaGGCGGCCATGAGGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: NENSKTSCKRSLGSCSQSVPELL*AAMRAR Trigger: CCGCGCCCTCATGGCCGCCAAGAGGAGCTCCGGGAC...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS-3UTR CAA 90 bp | GCAAACATCCTGATGTGGGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATAGCTTCATCAAGCTCTaGGGGCCTGTTAGTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ANILMWDAHQQHPQHLGDSFIKL*GPVSCT Trigger: GGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCT...ATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| CDS-3UTR CAA 90 bp | GTCTCACTACAGCTCTCACTGCAGATGGGAAGATTTCCACTTGGCACACTGAGCGACCAGGTCCCGGTCTaGCTCCAGAAACCATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VSLQLSLQMGRFPLGTLSDQVPV*LQKPWT Trigger: TGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGTC...GCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGAGCTGTAGTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| CDS-3UTR CAA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTCCTGCAGCGCTTGCTTaGCCAGCTCCTGCCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCPAALA*PAPARL Trigger: TAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGG...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS-3UTR CAA 90 bp | GCAAACATCCTGATGTGGGATGCACACCAGCAGCACCCCCAGCACTTGGGAGATTTCATACTGTTCACCTaGGCCCGTAACTATAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANILMWDAHQQHPQHLGDFILFT*ARNYNS Trigger: GCTGTTATAGTTACGGGCCAAGGTGAACAGTATGAA...ATCTCCCAAGTGCTGGGGGTGCTGCTGGTGTGCATCCCACATCAGGATGTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| CDS-3UTR CAA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTCCTGCAGCGCTTGCTTaGCCAGCTCCTGCCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KTLKRPVNEVWVPVAKALPAALA*PAPARL Trigger: TAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGG...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS GCA 90 bp | GAAGGAAGGATGACAATCTCCTGCAGCGCTTGCTTTGCCAGCTCCTaGCCGGCTATGTCATCAAACTTAACAGCTGTCCCATTGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: EGRMTISCSACFASS*PAMSSNLTAVPLST Trigger: TGTTGACAATGGGACAGCTGTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS GCA 90 bp | GAAACGCCTGAGAACAGCTTCATCAAGCTCTTGGGGCCTGTTAGTTaGACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ETPENSFIKLLGPVS*THYKYSVISSRLHP Trigger: GGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCTGTTCTCAGGCGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS-3UTR CAA 90 bp | AGCCGTCTGCTAGCGTCGTGCTCCCCTTCCCGTCTCTCACACAAAAGACTGTCATGGTTCTATTTGGTTTaGGAGTACCCTTATGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLLASCSPSRLSHKRLSWFYLV*EYPYVW Trigger: CCACACATAAGGGTACTCCAAAACCAAATAGAACCA...TGACAGTCTTTTGTGTGAGAGACGGGAAGGGGAGCACGACGCTAGCAGACGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTAATCTCCTGCAGCGCTaGCTTTGCCAGCTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVNLLQR*LCQLLP Trigger: GGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATT...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS-3UTR CAA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTACTCGAAGGCCTGCTaGTGGAAGACGCGGACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NENSKTSCKRSLGSCSQSYSKAC*WKTRTL Trigger: GAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTA...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS-3UTR CAA 90 bp | AGCCGTCTGCTAGCGTCGTGCTCCCCTTCCCGTCTCTCACACAAAAGACTGTCAAGTTGTAAACGGTCCTaGGCCATAACTAAATTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLLASCSPSRLSHKRLSSCKRS*AITKLV Trigger: GACTAATTTAGTTATGGCCAAGGACCGTTTACAACT...TGACAGTCTTTTGTGTGAGAGACGGGAAGGGGAGCACGACGCTAGCAGACGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| CDS-3UTR CAA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCAATCTCCTGCAGCGCTaGCTTTGCCAGCTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NENSKTSCKRSLGSCSQSNLLQR*LCQLLP Trigger: GGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATT...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS CCA 90 bp | AACTGCAGTTGTGGGAGTAGAAGGTTTGTTGGTTCTATTTGGTTTTaGAGTACCCTTATGTGTGGTAGCTGCAGGACCAGGTCCCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NCSCGSRRFVGSIWF*STLMCGSCRTRSRS Trigger: AGACCGGGACCTGGTCCTGCAGCTACCACACATAAGGGTACTCCAAAACCAAATAGAACCAACAAACCTTCTACTCCCACAACTGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS-3UTR CAA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGACCAGGTCCCGGTCTaGCTCCAGAAACCATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KTLKRPVNEVWVPVAKALDQVPV*LQKPWT Trigger: TGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGTC...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS-3UTR CAA 90 bp | CCGTCTGCTAGCGTCGTGCTCCCCTTCCCGTCTCTCACACAAAAGACTGTCAACGTTTGTTGGTTCTATTaGGTTTTGGAGTACCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PSASVVLPFPSLTQKTVNVCWFY*VLEYPY Trigger: ATAAGGGTACTCCAAAACCAAATAGAACCAACAAAC...GTTGACAGTCTTTTGTGTGAGAGACGGGAAGGGGAGCACGACGCTAGCAGACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| CDS CCA 90 bp | TTTCCGAACTGCAGTTGTGGGAGTAGAAGGTTTGTTGGTTCTATTTaGTTTTGGAGTACCCTTATGTGTGGTAGCTGCAGGACCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPNCSCGSRRFVGSI*FWSTLMCGSCRTRS Trigger: GGACCTGGTCCTGCAGCTACCACACATAAGGGTACTCCAAAACCAAATAGAACCAACAAACCTTCTACTCCCACAACTGCAGTTCGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS-3UTR CAA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTAGCTTCATCAAGCTCTaGGGGCCTGTTAGTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCSFIKL*GPVSCT Trigger: GGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCT...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
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| CDS-3UTR CAA 90 bp | GCCTTGGCCTTTCAAGCACCTTGGATCATAAGGCTTGGCTGTTACTTTCTTCCAATACCATTCCACAGCTaGTTCCTTCTGTCCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALAFQAPWIIRLGCYFLPIPFHS*FLLSCF Trigger: AAAGCAGGACAGAAGGAACAAGCTGTGGAATGGTAT...TGGAAGAAAGTAACAGCCAAGCCTTATGATCCAAGGTGCTTGAAAGGCCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| CDS-3UTR CAA 90 bp | GCACCCATTACAAGTACTCTGTCATCTCCAGCAGATTGCACCCCGTCAAATTCTACGTCCGTCTGTGACTaGGAAAATTGCAAAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: APITSTLSSPADCTPSNSTSVCD*ENCKTG Trigger: ACCAGTTTTGCAATTTTCCAAGTCACAGACGGACGT...AGAATTTGACGGGGTGCAATCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
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| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTGACTGGAGATGTCCATaGCGGCATGTCAGGTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVDWRCP*RHVRLV Trigger: TACTAACCTGACATGCCGCAATGGACATCTCCAGTC...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGATTTCCACTTGGCACACTGAGCTGGTAAGGAAGCAGGAAGAGCTCAGAAAAAATTATAGATGGTaGAAGTTCTCGAGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKISTWHTELVRKQEELRKNYRW*KFSSHS Trigger: GCTGTGGCTCGAGAACTTCAACCATCTATAATTTTT...TCTGAGCTCTTCCTGCTTCCTTACCAGCTCAGTGTGCCAAGTGGAAATCTTCCC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
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| CDS CCA 90 bp | TATACCCGTTTAATGAAACGCCTGAGAACAGCTTCATCAAGCTCTTaGGGCCTGTTAGTTGCACCCATTACAAGTACTCTGTCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YTRLMKRLRTASSSS*GLLVAPITSTLSSP Trigger: TGGAGATGACAGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCTGTTCTCAGGCGTTTCATTAAACGGGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS-3UTR CAA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGACTGGAGATGTCCATaGCGGCATGTCAGGTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KTLKRPVNEVWVPVAKALDWRCP*RHVRLV Trigger: TACTAACCTGACATGCCGCAATGGACATCTCCAGTC...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGTTTTTACTGTAGAAGACTGGAGATGTCCATaGCGGCATGTCAGGTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HRVIKRNPARMVLVFTVEDWRCP*RHVRLV Trigger: TACTAACCTGACATGCCGCAATGGACATCTCCAGTC...TTCTACAGTAAAAACAAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCACTACAGCTCTCACTGCAGATGGGAAGATTTCCACTTGGCACACTGAGCATAAGGTTAGCAAGATaGCTGTCCACATTCCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSLQLSLQMGRFPLGTLSIRLAR*LSTFLK Trigger: TTTTAGGAATGTGGACAGCAATCTTGCTAACCTTAT...GCTCAGTGTGCCAAGTGGAAATCTTCCCATCTGCAGTGAGAGCTGTAGTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTCTGTGCGAGTTCTTTTaGGGTCAGTGGACTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFLCEFF*GQWTSL Trigger: CAAGGAAGTCCACTGACCCAAAAAGAACTCGCACAG...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTGTGCGAGTTCTTTTaGGGTCAGTGGACTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MKTLKRPVNEVWVPVAKALCEFF*GQWTSL Trigger: CAAGGAAGTCCACTGACCCAAAAAGAACTCGCACAG...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS CCA 90 bp | TCCATCGGTCATTCTAGCAAGCTGTGCGAGTTCTTTTTGGGTCAGTaGACTTCCTTGTTTACACAACAGGTTTTTAAGCAGAAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIGHSSKLCEFFLGQ*TSLFTQQVFKQKES Trigger: AGACTCCTTCTGCTTAAAAACCTGTTGTGTAAACAAGGAAGTCCACTGACCCAAAAAGAACTCGCACAGCTTGCTAGAATGACCGATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTACGTCCGTCTGTGACTaGGAAAATTGCAAAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCTSVCD*ENCKTG Trigger: ACCAGTTTTGCAATTTTCCAAGTCACAGACGGACGT...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTCTGGCAGCACTTATGTaGAAAAAGGTCGCATTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVLAALM*KKVALD Trigger: GTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAG...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTGTCTTGTCTCCTCATTaGGTAAGGACACATATACCC | + |
|
Preference number: 5 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCVLSPH*VRTHIP Trigger: GGGTATATGTGTCCTTACCAAATGAGGAGACAAGAC...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTGTGTCTCCAAAATCCTaGTTCCAGCGTATGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVVSPKS*FQRMYA Trigger: AGCATACATACGCTGGAACAAGGATTTTGGAGACAC...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGCTTCTCTACAGTGAGTGATGGACAGTCACACAGCAATAACTTTGAGTTTATACCATTCCACAGCTaGTTCCTTCTGTCCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCFSTVSDGQSHSNNFEFIPFHS*FLLSCF Trigger: AAAGCAGGACAGAAGGAACAAGCTGTGGAATGGTAT...AAACTCAAAGTTATTGCTGTGTGACTGTCCATCACTCACTGTAGAGAAGCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTTCATACTGTTCACCTaGGCCCGTAACTATAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NENSKTSCKRSLGSCSQSFILFT*ARNYNS Trigger: GCTGTTATAGTTACGGGCCAAGGTGAACAGTATGAA...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTACGTCCGTCTGTGACTaGGAAAATTGCAAAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MKTLKRPVNEVWVPVAKATSVCD*ENCKTG Trigger: ACCAGTTTTGCAATTTTCCAAGTCACAGACGGACGT...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTGGTTCTATTTGGTTTaGGAGTACCCTTATGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVWFYLV*EYPYVW Trigger: CCACACATAAGGGTACTCCAAAACCAAATAGAACCA...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCGGAGTAGAAGGTTTGTaGGTTCTATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LKRPVNEVWVPVAKALVSGVEGL*VLFGFG Trigger: TCCAAAACCAAATAGAACCAACAAACCTTCTACTCC...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | TTCGAAACGTCTAACCACAGAGTTATAAAACGCAACCCTGCCAGGATGGTGCTTGTGGGAGTAGAAGGTTaGTTGGTTCTATTTGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FETSNHRVIKRNPARMVLVGVEG*LVLFGF Trigger: AAAACCAAATAGAACCAACAAACCTTCTACTCCCAC...AAGCACCATCCTGGCAGGGTTGCGTTTTATAACTCTGTGGTTAGACGTTTCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CAA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCCTGGCAGCACTTATGTaGAAAAAGGTCGCATTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NENSKTSCKRSLGSCSQSLAALM*KKVALD Trigger: GTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAG...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTCTTCTCCCACATATTTaGAAGTTAAACTGGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVLLPHI*KLNWQH Trigger: GTGCTGCCAGTTTAACTTCAAAATATGTGGGAGAAG...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCGTCTTGTCTCCTCATTaGGTAAGGACACATATACCC | + |
|
Preference number: 5 (lower is better) Translates to: NENSKTSCKRSLGSCSQSVLSPH*VRTHIP Trigger: GGGTATATGTGTCCTTACCAAATGAGGAGACAAGAC...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | AATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCGTGTCTCCAAAATCCTaGTTCCAGCGTATGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NENSKTSCKRSLGSCSQSVSPKS*FQRMYA Trigger: AGCATACATACGCTGGAACAAGGATTTTGGAGACAC...GCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS TCA 90 bp | TGTAAACGGTCCTTGGCCATAACTAAATTAGTCATCATTTTGGCTTaGAGACGTCTAGCTCTTTCATACTGTTCACCTTGGCCCGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: CKRSLAITKLVIILA*RRLALSYCSPWPVT Trigger: AGTTACGGGCCAAGGTGAACAGTATGAAAGAGCTAGACGTCTTCAAGCCAAAATGATGACTAATTTAGTTATGGCCAAGGACCGTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTGGCAGACCCTTCTTTCTTTATCTTAAGACTTATTCTCAAAAAGTTGGCCTTCATACTGTTCACCTaGGCCCGTAACTATAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLADPSFFILRLILKKLAFILFT*ARNYNS Trigger: GCTGTTATAGTTACGGGCCAAGGTGAACAGTATGAA...GGCCAACTTTTTGAGAATAAGTCTTAAGATAAAGAAAGAAGGGTCTGCCAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTAGTTGTAAACGGTCCTaGGCCATAACTAAATTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVSCKRS*AITKLV Trigger: GACTAATTTAGTTATGGCCAAGGACCGTTTACAACT...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGACAACCCCTTTTCTGCAGATTTAATCCCTTGGCAGACCCTTCTTTCTTTGGAGTAGAAGGTTTGTaGGTTCTATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARQPLFCRFNPLADPSFFGVEGL*VLFGFG Trigger: TCCAAAACCAAATAGAACCAACAAACCTTCTACTCC...AAAGAAAGAAGGGTCTGCCAAGGGATTAAATCTGCAGAAAAGGGGTTGTCTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTGTGGGAGTAGAAGGTTaGTTGGTTCTATTTGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCVGVEG*LVLFGF Trigger: AAAACCAAATAGAACCAACAAACCTTCTACTCCCAC...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTGTGGGAGTAGAAGGTTaGTTGGTTCTATTTGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLKRPVNEVWVPVAKALVVGVEG*LVLFGF Trigger: AAAACCAAATAGAACCAACAAACCTTCTACTCCCAC...AACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | CTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTTTCCATAAGGTTAGCAAGATaGCTGTCCACATTCCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKRPVNEVWVPVAKALVSIRLAR*LSTFLK Trigger: TTTTAGGAATGTGGACAGCAATCTTGCTAACCTTAT...GGAAACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | AAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTCTTCTCCCACATATTTaGAAGTTAAACTGGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KTLKRPVNEVWVPVAKALLLPHI*KLNWQH Trigger: GTGCTGCCAGTTTAACTTCAAAATATGTGGGAGAAG...AAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTAGTTGTAAACGGTCCTaGGCCATAACTAAATTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MKTLKRPVNEVWVPVAKASCKRS*AITKLV Trigger: GACTAATTTAGTTATGGCCAAGGACCGTTTACAACT...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTCTTGTGTTTGTTGGTTCTATTaGGTTTTGGAGTACCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: NSKTSCKRSLGSCSQSSCVCWFY*VLEYPY Trigger: ATAAGGGTACTCCAAAACCAAATAGAACCAACAAAC...ACAAGAGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTGGAGTAGAAGGTTTGTaGGTTCTATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MKTLKRPVNEVWVPVAKAGVEGL*VLFGFG Trigger: TCCAAAACCAAATAGAACCAACAAACCTTCTACTCC...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCTAAAACGTCCTGTAAACGAAGTCTGGGTTCCTGTAGCCAAAGCTAAAAATTATAGATGGTaGAAGTTCTCGAGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: MKTLKRPVNEVWVPVAKAKNYRW*KFSSHS Trigger: GCTGTGGCTCGAGAACTTCAACCATCTATAATTTTT...AGCTTTGGCTACAGGAACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGATGCAGGCATGAAGATCAGTTTAAGGTATTTATTTATAGGCTACCCATGGTTCTATTTGGTTTaGGAGTACCCTTATGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGDAGMKISLRYLFIGYPWFYLV*EYPYVW Trigger: CCACACATAAGGGTACTCCAAAACCAAATAGAACCA...TGGGTAGCCTATAAATAAATACCTTAAACTGATCTTCATGCCTGCATCTCCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024869.8 |
||
| CDS-3UTR CAA 90 bp | ACATATTTTGAAGTTAAACTGGCAGCACTTATGTTGAAAAAGGTCGCATTAGACATAAGGTTAGCAAGATaGCTGTCCACATTCCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TYFEVKLAALMLKKVALDIRLAR*LSTFLK Trigger: TTTTAGGAATGTGGACAGCAATCTTGCTAACCTTAT...GTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAGTTTAACTTCAAAATATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225549.2 |
||
| CDS TCA 72 bp | GCGCCGGCGCGGTCCCGGAGCTCCTCTTGGCGGCCATaGGGGCGCGGGAGAAGCGCTGGCAGAGCCACGCGA | + |
|
Preference number: 6 (lower is better) Translates to: APARSRSSSWRP*GRGRSAGRATR Trigger: TCGCGTGGCTCTGCCAGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGAGCTCCGGGACCGCGCCGGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
||
| CDS CCA 72 bp | CTCCTCTTGGCGGCCATGAGGGCGCGGGAGAAGCGCTaGCAGAGCCACGCGAAGAGGAGCCCCAGGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLAAMRAREKR*QSHAKRSPRWQ Trigger: CTGCCACCTGGGGCTCCTCTTCGCGTGGCTCTGCCAGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
||
| CDS CAA 90 bp | TCCTCGTCGATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTGCTaGTGGAAGACGCGGACGCTCTCGGCCTCGCCACCCGGTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSMRRAMEMYSKAC*WKTRTLSASPPGPG Trigger: GCCCGGACCGGGTGGCGAGGCCGAGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGACGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
||
| CDS CAA 72 bp | ATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTGCTaGTGGAAGACGCGGACGCTCTCGGCCTCGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: MRRAMEMYSKAC*WKTRTLSASPP Trigger: GGGTGGCGAGGCCGAGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
||
| CDS GCA 72 bp | TCGATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTaGTTGTGGAAGACGCGGACGCTCTCGGCCTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SMRRAMEMYSKA*LWKTRTLSASP Trigger: TGGCGAGGCCGAGAGCGTCCGCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
||
| CDS TCA 72 bp | ACCATGGACAAACCACTGCAACTAGGCGCCCTGTGGTaGCCGGAGAGCCCTGCGGAGCCACTTTTCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TMDKPLQLGALW*PESPAEPLFRT Trigger: TGTCCTGAAAAGTGGCTCCGCAGGGCTCTCCGGTCACCACAGGGCGCCTAGTTGCAGTGGTTTGTCCATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
||
| CDS GCA 72 bp | CTGCTCTGGCTTCAGTTCTCGGATAGGACCCAGGGCTaGATCCTTGGCCAAAGCGGTCAGATCACTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLWLQFSDRTQG*ILGQSGQITSR Trigger: TCTGGAAGTGATCTGACCGCTTTGGCCAAGGATGCAGCCCTGGGTCCTATCCGAGAACTGAAGCCAGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
||
| CDS CCA 72 bp | GTCCTGCTTTCTCTTCCTCGTCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGCTTGTGGAAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: VLLSLPRRCAGQ*RCTRRPACGRR Trigger: GCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGACGAGGAAGAGAAAGCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024869.8 ENSMUST00000225549.2 |
||
| CDS CAA 90 bp | AGCCTCAGGCCGCAGAGAAGGAAGGATGACAATCTCCTGCAGCGCTaGCTTTGCCAGCTCCTGCCCGGCTATGTCATCAAACTTAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLRPQRRKDDNLLQR*LCQLLPGYVIKLNS Trigger: GCTGTTAAGTTTGATGACATAGCCGGGCAGGAGCTGGCAAAGCAAGCGCTGCAGGAGATTGTCATCCTTCCTTCTCTGCGGCCTGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233554.2 |
||
| CDS CCA 72 bp | TCTGTCCTTTCTCTTCCTCGTCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGCTTGTGGAAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: SVLSLPRRCAGQ*RCTRRPACGRR Trigger: GCGTCTTCCACAAGCAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGACGAGGAAGAGAAAGGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224711.2 ENSMUST00000233611.2 |
||
| CDS CAA 72 bp | GGCTTCAGTTCTCGGATAGGACCCAGGGCTGCATCCTaGGCCAAAGCGGTCAGATCACTTCCAGAGTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: GFSSRIGPRAAS*AKAVRSLPEYP Trigger: TGGATACTCTGGAAGTGATCTGACCGCTTTGGCCAAGGATGCAGCCCTGGGTCCTATCCGAGAACTGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
||
| CDS GCA 72 bp | CTTATGTGTGGTAGCTGCAGGACCAGGTCCCGGTCTTaGTCCAGAAACCATGGACAAACCACTGCAACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LMCGSCRTRSRS*SRNHGQTTATR Trigger: CCTAGTTGCAGTGGTTTGTCCATGGTTTCTGGAGCAAGACCGGGACCTGGTCCTGCAGCTACCACACATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
||
| CDS GCA 72 bp | GGCAGCACTTATGTTGAAAAAGGTCGCATTAGACTCTaGAGCTACTGCTTTAGCCTCAGGCCGCAGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSTYVEKGRIRL*SYCFSLRPQRR Trigger: CCTTCTCTGCGGCCTGAGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACCTTTTTCAACATAAGTGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233554.2 |
||
| CDS GCA 72 bp | ATATTTCTCATCTCACTGGCAGACATATTCTTCACCTaGTCTGGCTTCAGTTCTCGGATAGGACCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IFLISLADIFFT*SGFSSRIGPRA Trigger: AGCCCTGGGTCCTATCCGAGAACTGAAGCCAGAGCAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS CAA 90 bp | ATATACCCGTTTAATGAAACGCCTGAGAACAGCTTCATCAAGCTCTaGGGGCCTGTTAGTTGCACCCATTACAAGTACTCTGTCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: IYPFNETPENSFIKL*GPVSCTHYKYSVIS Trigger: GGAGATGACAGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCTGTTCTCAGGCGTTTCATTAAACGGGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS CCA 72 bp | TTAATGAAACGCCTGAGAACAGCTTCATCAAGCTCTTaGGGCCTGTTAGTTGCACCCATTACAAGTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LMKRLRTASSSS*GLLVAPITSTL Trigger: CAGAGTACTTGTAATGGGTGCAACTAACAGGCCCCAAGAGCTTGATGAAGCTGTTCTCAGGCGTTTCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS CAA 72 bp | TCCATCGGTCATTCTAGCAAGCTGTGCGAGTTCTTTTaGGGTCAGTGGACTTCCTTGTTTACACAACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SIGHSSKLCEFF*GQWTSLFTQQV Trigger: AACCTGTTGTGTAAACAAGGAAGTCCACTGACCCAAAAAGAACTCGCACAGCTTGCTAGAATGACCGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS CAA 90 bp | CATTCTAGCAAGCTGTGCGAGTTCTTTTTGGGTCAGTGGACTTCCTaGTTTACACAACAGGTTTTTAAGCAGAAGGAGTCTTGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HSSKLCEFFLGQWTS*FTQQVFKQKESCLL Trigger: GAGGAGACAAGACTCCTTCTGCTTAAAAACCTGTTGTGTAAACAAGGAAGTCCACTGACCCAAAAAGAACTCGCACAGCTTGCTAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS CAA 90 bp | TCCAGAGTATCCATCGGTCATTCTAGCAAGCTGTGCGAGTTCTTTTaGGGTCAGTGGACTTCCTTGTTTACACAACAGGTTTTTAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SRVSIGHSSKLCEFF*GQWTSLFTQQVFKQ Trigger: CTGCTTAAAAACCTGTTGTGTAAACAAGGAAGTCCACTGACCCAAAAAGAACTCGCACAGCTTGCTAGAATGACCGATGGATACTCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000233611.2 |
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| CDS TCA 72 bp | TGTCAGGTTAGTACTCTCGTTATAGACGTCCGTCTGTaGCTTGGAAAATTGCAAAACTGGTTGCAGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CQVSTLVIDVRL*LGKLQNWLQLL Trigger: GAGAAGCTGCAACCAGTTTTGCAATTTTCCAAGTCACAGACGGACGTCTATAACGAGAGTACTAACCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 |
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| CDS CAA 90 bp | AAGTCTTTCTTTTTCCGAACTGCAGTTGTGGGAGTAGAAGGTTTGTaGGTTCTATTTGGTTTTGGAGTACCCTTATGTGTGGTAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KSFFFRTAVVGVEGL*VLFGFGVPLCVVAA Trigger: TGCAGCTACCACACATAAGGGTACTCCAAAACCAAATAGAACCAACAAACCTTCTACTCCCACAACTGCAGTTCGGAAAAAGAAAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS CAA 90 bp | TCTCCTTCTCCCACATATTTTGAAGTTAAACTGGCAGCACTTATGTaGAAAAAGGTCGCATTAGACTCTGCAGCTACTGCTTTAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SPSPTYFEVKLAALM*KKVALDSAATALAS Trigger: TGAGGCTAAAGCAGTAGCTGCAGAGTCTAATGCGACCTTTTTCAACATAAGTGCTGCCAGTTTAACTTCAAAATATGTGGGAGAAGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233554.2 |
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| CDS CAA 72 bp | TTTTTCCGAACTGCAGTTGTGGGAGTAGAAGGTTTGTaGGTTCTATTTGGTTTTGGAGTACCCTTATGTGTG | + |
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Preference number: 6 (lower is better) Translates to: FFRTAVVGVEGL*VLFGFGVPLCV Trigger: CACACATAAGGGTACTCCAAAACCAAATAGAACCAACAAACCTTCTACTCCCACAACTGCAGTTCGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS CAA 90 bp | TTCAAGTCTTTCTTTTTCCGAACTGCAGTTGTGGGAGTAGAAGGTTaGTTGGTTCTATTTGGTTTTGGAGTACCCTTATGTGTGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: FKSFFFRTAVVGVEG*LVLFGFGVPLCVVA Trigger: AGCTACCACACATAAGGGTACTCCAAAACCAAATAGAACCAACAAACCTTCTACTCCCACAACTGCAGTTCGGAAAAAGAAAGACTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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| CDS TCA 72 bp | TCCTTGGCCATAACTAAATTAGTCATCATTTTGGCTTaGAGACGTCTAGCTCTTTCATACTGTTCACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SLAITKLVIILA*RRLALSYCSPW Trigger: CCAAGGTGAACAGTATGAAAGAGCTAGACGTCTTCAAGCCAAAATGATGACTAATTTAGTTATGGCCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233611.2 |
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| CDS CAA 72 bp | TTCTTTTTCCGAACTGCAGTTGTGGGAGTAGAAGGTTaGTTGGTTCTATTTGGTTTTGGAGTACCCTTATGT | + |
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Preference number: 6 (lower is better) Translates to: FFFRTAVVGVEG*LVLFGFGVPLC Trigger: ACATAAGGGTACTCCAAAACCAAATAGAACCAACAAACCTTCTACTCCCACAACTGCAGTTCGGAAAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024869.8 ENSMUST00000224711.2 ENSMUST00000225549.2 ENSMUST00000233554.2 ENSMUST00000233611.2 |
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