Pregenerated sensors for SPARCL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029309Ensembl transcript IDs: ENSMUST00000031249.8, ENSMUST00000199947.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTAGTGACATTGCCATGGTaGCTAACTGTCCCCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: RHIYLKRAVSHFLSMHKVVTLPW*LTVPRQ Trigger: CTGTCTGGGGACAGTTAGCCACCATGGCAATGTCAC...TACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAGAGTGACATTGCCATaGTGGCTAACTGTCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: KRRHIYLKRAVSHFLSMHRVTLP*WLTVPR Trigger: TCTGGGGACAGTTAGCCACCATGGCAATGTCACTCT...ATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATTTGTCTTCTCTCACATaGAAACAAATGTTTTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: KRRHIYLKRAVSHFLSMHLSSLT*KQMFCY Trigger: GTAGCAAAACATTTGTTTGCATGTGAGAGAAGACAA...ATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGAGGGGGACAAGTCTCTaGATCTTGGCAAACACAGTG | + |
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Preference number: 4 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRRGTSL*ILANTV Trigger: CACTGTGTTTGCCAAGATCCAGAGACTTGTCCCCCT...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGCTTGGGTTTGCTTGCTaGTTTCATTCGGTTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRLGFAC*FHSVAG Trigger: ACCAGCAACCGAATGAAAGCAGCAAGCAAACCCAAG...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGAGGTTTGGTTGTCAGTaGCACAAGCCTGATCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRRFGCQ*HKPDLG Trigger: TCCTAGATCAGGCTTGTGGCACTGACAACCAAACCT...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGGCCTTGTCACTGGGATaGTTTTCTATGTCTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRALSLG*FSMSAV Trigger: TACAGCAGACATAGAAAACCATCCCAGTGACAAGGC...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | TATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTATGGACAGCTTTCTTGGCCTCTTaGTTGTCTGCAGCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: YLKRAVSHFLSMHKVLWTAFLAS*LSAASL Trigger: GAGGGAGGCTGCAGACAACCAAGAGGCCAAGAAAGC...TGTCCATAATACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAGTTGGTGTCCCTTTTTaGTCCCCTCCAGCCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACIVGVPF*SPPACT Trigger: AGTGCAGGCTGGAGGGGACCAAAAAGGGACACCAAC...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATCGGTGTCACCAGTGTTaGAGTAGTTGGGTTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRRHIYLKRAVSHFLSMHRCHQC*SSWVGV Trigger: CACTCCAACCCAACTACTGCAACACTGGTGACACCG...ATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGTGTCAAGATCCTGTCTaGAGGATGCTGGTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: ATYECIVSWLLVFLKRLKCQDPV*RMLVQF Trigger: GAACTGGACCAGCATCCTGCAGACAGGATCTTGACA...CTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGTTTCAGCCTTGTCACTaGGATGGTTTTCTATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRFQPCH*DGFLCL Trigger: CAGACATAGAAAACCATCCCAGTGACAAGGCTGAAA...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGCTTCCTCTTCTTCATTaGGAATGTCTGGATCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRLPLLH*ECLDLV Trigger: CACAAGATCCAGACATTCCCAATGAAGAAGAGGAAG...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATACCTCTTGGTTATCACTaGGGGCACCAATGTCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACIPLGYH*GHQCLP Trigger: CGGAAGACATTGGTGCCCCCAGTGATAACCAAGAGG...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | GCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCTGCTGCTCTGTATGTaGAATGTGTTCCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATYECIVSWLLVFLKRLKLLLCM*NVFLAA Trigger: GGCAGCAAGGAACACATTCCACATACAGAGCAGCAG...CTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR TCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATACTTACAGGTTGCTCCTaGCTCTCCTTTCCCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACILTGCS*LSFPFV Trigger: CACAAAGGGAAAGGAGAGTCAGGAGCAACCTGTAAG...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATCACTTGCTGGTAGGCTaGTCCTCCAGAGGTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: KRRHIYLKRAVSHFLSMHHLLVG*SSRGSF Trigger: AAAAGAACCTCTGGAGGAGCAGCCTACCAGCAAGTG...ATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATACCAGCTTTCCCTTCTTaGTCCTGCTGCTCTGTATGT | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACIPAFPS*SCCSVC Trigger: ACATACAGAGCAGCAGGACCAAGAAGGGAAAGCTGG...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATTCCCTTTGTGATGTTTaGGCGTTGGTTAGGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: KRRHIYLKRAVSHFLSMHSLCDV*ALVRIH Trigger: GTGGATCCTAACCAACGCGCAAACATCACAAAGGGA...ATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGAGTCTTGGGTTTGCTTaGTGCTTTCATTCGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: ATYECIVSWLLVFLKRLKSLGFA*CFHSVA Trigger: AGCAACCGAATGAAAGCAGCAAGCAAACCCAAGACT...CTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTGAATGTGTTCCTTGCTaGCTGCAGCCTTGTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ANKCFATYECIVSWLLVFECVPC*LQPCPL Trigger: GAGAGGACAAGGCTGCAGGCAGCAAGGAACACATTC...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATACAAAGAAGCGAGTTATaGAGTGTTCCATGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACIQRSEL*SVPWAP Trigger: TGGTGCCCATGGAACACTGCATAACTCGCTTCTTTG...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATATCTGAGTGGGCTGACTaGACTCTTCTAAGGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACISEWAD*TLLRCH Trigger: ATGACACCTTAGAAGAGTCCAGTCAGCCCACTCAGA...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR TCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGTCTTGGCAAACACAGTaGGGTTTCCCTTGTGGATCG | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKSWQTQ*GFPCGS Trigger: CGATCCACAAGGGAAACCTCACTGTGTTTGCCAAGA...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | TATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTATGGACAAAGGTGTCATCAGATTaGTCTCTGTTTCCTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: YLKRAVSHFLSMHKVLWTKVSSD*SLFPSH Trigger: GTGGGAAGGAAACAGAGAGCAATCTGATGACACCTT...TGTCCATAATACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTTCAGAGTCACTCTCCTaGCCTTGGTTTCCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ANKCFATYECIVSWLLVFSESLS*PWFPCS Trigger: TGAGCAAGGAAACCAAGGGCAGGAGAGTGACTCTGA...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTTGTGCTCCCTTGAGTTaGCCTCATCTGAAGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ANKCFATYECIVSWLLVFCAPLS*PHLKVQ Trigger: CTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACA...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATATACATTGGAAGTTCGTaGAAGAACCAGCACTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACIYIGSS*KNQHCA Trigger: AGCACAGTGCTGGTTCTTGCACGAACTTCCAATGTA...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATCTTGCTTATCTGAGTaGGCTGACTGGACTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: RHIYLKRAVSHFLSMHKVSCLSE*ADWTLL Trigger: TAGAAGAGTCCAGTCAGCCCACTCAGATAAGCAAGA...TACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGAGCTCTCAGCTTTCTTaGCCTCTTGGTTGTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKSSQLS*PLGCLQ Trigger: CTGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCT...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | GCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGGCCATGTTTGGGATTTaGTTCATAAAGCTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: ATYECIVSWLLVFLKRLKAMFGI*FIKLHE Trigger: CTCATGCAGCTTTATGAACCAAATCCCAAACATGGC...CTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR TCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGGGGAGACTTTTCTGTTaGGGCTCACTTGTACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKGRLFC*GSLVPS Trigger: AGAAGGTACAAGTGAGCCTCAACAGAAAAGTCTCCC...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR TCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCCCATTCCTTCAAGGTaGTGTGCTTATCCTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKPIPSR*CAYPCW Trigger: CCAACAAGGATAAGCACATCACCTTGAAGGAATGGG...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGTTCCCTTCTTGGTCCTaGTGCTCTGTATGTGGAATG | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKFPSWS*CSVCGM Trigger: CATTCCACATACAGAGCAGCAGGACCAAGAAGGGAA...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGTCATTAAACTGCCAGTaGACAGGATACACATACATG | + |
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Preference number: 4 (lower is better) Translates to: ATYECIVSWLLVFLKRLKSLNCQ*TGYTYM Trigger: CATGTATGTGTATCCTGTGCACTGGCAGTTTAATGA...CTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATCAGCCTTTAAGTCTTaGGTTTGCTTGCTGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RHIYLKRAVSHFLSMHKVSAFKS*VCLLLS Trigger: TGAAAGCAGCAAGCAAACCCAAGACTTAAAGGCTGA...TACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATATCTGGATCTTGTGTCTaGCTTTCTTCAGCCTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: KGGIFISKEQYLTSSACISGSCV*LSSAFK Trigger: CTTAAAGGCTGAAGAAAGCCAGACACAAGATCCAGA...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTCATTGGGAATGTCTaGATCTTGTGTCTGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RHIYLKRAVSHFLSMHKVFIGNV*ILCLAF Trigger: GAAAGCCAGACACAAGATCCAGACATTCCCAATGAA...TACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR TCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGTTTGTCCTGCTCTGTTaGCTGTTCATGAGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKFVLLC*LFMSFL Trigger: GAGGAAACTCATGAACAGTCAACAGAGCAGGACAAA...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGTCCTTCAAGGTGATGTaGTTATCCTTGTTGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKSFKVM*LSLLGS Trigger: TGACCCCAACAAGGATAAGCACATCACCTTGAAGGA...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR CCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGTGTGCTTATCCTTGTTaGGGTCACACTCCTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKCAYPC*GHTPQR Trigger: TCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACA...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTTCCAGTTCATTAAACTaGCAGTGCACAGGATACACA | + |
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Preference number: 4 (lower is better) Translates to: ANKCFATYECIVSWLLVFSSSLN*QCTGYT Trigger: TGTGTATCCTGTGCACTGGCAGTTTAATGAACTGGA...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGTTTAAGTCTTGGGTTTaGTTGCTGCTTTCATTCGGT | + |
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Preference number: 4 (lower is better) Translates to: KCFATYECIVSWLLVFLKFKSWV*LLLSFG Trigger: ACCGAATGAAAGCAGCAAGCAAACCCAAGACTTAAA...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS GCA 90 bp | AGTTGGGTTGGAGTGGTCAGAGAGAAACCTTGTACTTGTCGGGATTaGCACAGCGGTTCCCAAGGCGCACAGGAGGAGAAGCACAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SWVGVVREKPCTCRD*HSGSQGAQEEKHSL Trigger: AAGGCTGTGCTTCTCCTCCTGTGCGCCTTGGGAACCGCTGTGGCAATCCCGACAAGTACAAGGTTTCTCTCTGACCACTCCAACCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CCA 90 bp | TGCCCTCATCTGAAGGTTCAGCATTTGGTGAGCTCTCAGCTTTCTTaGCCTCTTGGTTGTCTGCAGCCTCCCTCCGGTTCTCACTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: CPHLKVQHLVSSQLS*PLGCLQPPSGSHSR Trigger: GCGAGAGTGAGAACCGGAGGGAGGCTGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGATGAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CCA 90 bp | TCTGAAGGTTCAGCATTTGGTGAGCTCTCAGCTTTCTTGGCCTCTTaGTTGTCTGCAGCCTCCCTCCGGTTCTCACTCTCGCCAGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEGSAFGELSAFLAS*LSAASLRFSLSPVV Trigger: AACGACTGGCGAGAGTGAGAACCGGAGGGAGGCTGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS GCA 90 bp | AACCCCGGCAATGGGGACTGTAGCGTCTTCCGGTGTCACCAGTGTTaGAGTAGTTGGGTTGGAGTGGTCAGAGAGAAACCTTGTACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NPGNGDCSVFRCHQC*SSWVGVVREKPCTC Trigger: ACAAGTACAAGGTTTCTCTCTGACCACTCCAACCCAACTACTGCAACACTGGTGACACCGGAAGACGCTACAGTCCCCATTGCCGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
||
| CDS GCA 90 bp | TGGTTGCCAATAGCTTCAAGGCCAGCTTTCCCTTCTTGGTCCTGCTaGTCTGTATGTGGAATGTGTTCCTTGCTGCCTGCAGCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLPIASRPAFPSWSC*SVCGMCSLLPAALS Trigger: GGACAAGGCTGCAGGCAGCAAGGAACACATTCCACATACAGAGCAGCAGGACCAAGAAGGGAAAGCTGGCCTTGAAGCTATTGGCAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS CCA 90 bp | GTAGCGTCTTCCGGTGTCACCAGTGTTGCAGTAGTTGGGTTGGAGTaGTCAGAGAGAAACCTTGTACTTGTCGGGATTGCCACAGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VASSGVTSVAVVGLE*SERNLVLVGIATAV Trigger: AACCGCTGTGGCAATCCCGACAAGTACAAGGTTTCTCTCTGACCACTCCAACCCAACTACTGCAACACTGGTGACACCGGAAGACGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
||
| CDS GCA 90 bp | GTGTCATCAGATTGCTCTCTGTTTCCTTCCCACTTGCTGGTAGGCTaGTCCTCCAGAGGTTCTTTTCCCTCCTCTTGGTTATCACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSDCSLFPSHLLVG*SSRGSFPSSWLSLG Trigger: CCCCAGTGATAACCAAGAGGAGGGAAAAGAACCTCTGGAGGAGCAGCCTACCAGCAAGTGGGAAGGAAACAGAGAGCAATCTGATGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS GCA 90 bp | TGTGCTTATCCTTGTTGGGGTCACACTCCTCAAAGAAGCGAGTTATaGAGTGTTCCATGGGCACCAGGGAAGCTCGCAGAGGAGCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CAYPCWGHTPQRSEL*SVPWAPGKLAEEQV Trigger: AACTTGCTCCTCTGCGAGCTTCCCTGGTGCCCATGGAACACTGCATAACTCGCTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS CCA 90 bp | GTGTCCTTCTGGTTGCCAATAGCTTCAAGGCCAGCTTTCCCTTCTTaGTCCTGCTGCTCTGTATGTGGAATGTGTTCCTTGCTGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSFWLPIASRPAFPS*SCCSVCGMCSLLPA Trigger: TGCAGGCAGCAAGGAACACATTCCACATACAGAGCAGCAGGACCAAGAAGGGAAAGCTGGCCTTGAAGCTATTGGCAACCAGAAGGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGAGTTGGTGTCCCTTTTaGGTCCCCTCCAGCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRSWCPF*VPSSLH Trigger: GTGCAGGCTGGAGGGGACCAAAAAGGGACACCAACT...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS TCA 90 bp | CTGCTTTCATTCGGTTGCTGGTGTGAGTCACTTACAGGTTGCTCCTaGCTCTCCTTTCCCTTTGTGATGTTTGCGCGTTGGTTAGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSFGCWCESLTGCS*LSFPFVMFARWLGS Trigger: GGATCCTAACCAACGCGCAAACATCACAAAGGGAAAGGAGAGTCAGGAGCAACCTGTAAGTGACTCACACCAGCAACCGAATGAAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
||
| CDS GCA 90 bp | TCTCCTGCCCTTGGTTTCCTTGCTCAGATTGATGCTTCTCTGTCTTaGTTATCTGAGTGGGCTGACTGGACTCTTCTAAGGTGTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPALGFLAQIDASLS*LSEWADWTLLRCHQ Trigger: CTGATGACACCTTAGAAGAGTCCAGTCAGCCCACTCAGATAAGCAAGACAGAGAAGCATCAATCTGAGCAAGGAAACCAAGGGCAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS GCA 90 bp | TACATTGGAAGTTCGTGCAAGAACCAGCACTGTGCTCCCTTGAGTTaGCCTCATCTGAAGGTTCAGCATTTGGTGAGCTCTCAGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YIGSSCKNQHCAPLS*PHLKVQHLVSSQLS Trigger: AGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAGTGCTGGTTCTTGCACGAACTTCCAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS GCA 90 bp | ATGTGTCCCCTTTTACATTGGAAGTTCGTGCAAGAACCAGCACTGTaGTCCCTTGAGTTGCCCTCATCTGAAGGTTCAGCATTTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MCPLLHWKFVQEPAL*SLELPSSEGSAFGE Trigger: CTCACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAGTGCTGGTTCTTGCACGAACTTCCAATGTAAAAGGGGACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGTTCTTTTCCCTCCTCTaGGTTATCACTGGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRFFSLL*VITGGT Trigger: GGTGCCCCCAGTGATAACCAAGAGGAGGGAAAAGAA...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGGTCACTCTCCTGCCCTaGGTTTCCTTGCTCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRVTLLP*VSLLRL Trigger: CAATCTGAGCAAGGAAACCAAGGGCAGGAGAGTGAC...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS CCA 90 bp | GCTCAGATTGATGCTTCTCTGTCTTGCTTATCTGAGTGGGCTGACTaGACTCTTCTAAGGTGTCATCAGATTGCTCTCTGTTTCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQIDASLSCLSEWAD*TLLRCHQIALCFLP Trigger: GGGAAGGAAACAGAGAGCAATCTGATGACACCTTAGAAGAGTCCAGTCAGCCCACTCAGATAAGCAAGACAGAGAAGCATCAATCTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGGTTGCAGTAGTTGGGTaGGAGTGGTCAGAGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRVAVVG*EWSERN Trigger: GTTTCTCTCTGACCACTCCAACCCAACTACTGCAAC...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCAGGTGAGGGGGAATGTCTGGATCTaGTGTCTGGCTTTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECIVSWLLVFLKRLKQVRGNVWI*CLAFFS Trigger: GCTGAAGAAAGCCAGACACAAGATCCAGACATTCCC...CCTCACCTGCTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS GCA 90 bp | TCCTCTTTAATTCCAAAGCAGTGGCCCCATTCCTTCAAGGTGATGTaGTTATCCTTGTTGGGGTCACACTCCTCAAAGAAGCGAGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SSLIPKQWPHSFKVM*LSLLGSHSSKKRVM Trigger: CATAACTCGCTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCTTGAAGGAATGGGGCCACTGCTTTGGAATTAAAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS CCA 90 bp | GGTTTCCTTGCTCAGATTGATGCTTCTCTGTCTTGCTTATCTGAGTaGGCTGACTGGACTCTTCTAAGGTGTCATCAGATTGCTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFLAQIDASLSCLSE*ADWTLLRCHQIALC Trigger: ACAGAGAGCAATCTGATGACACCTTAGAAGAGTCCAGTCAGCCCACTCAGATAAGCAAGACAGAGAAGCATCAATCTGAGCAAGGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTATGGACATTGCTGCCTGCAGCCTaGTCCTCTCCTTCTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YLKRAVSHFLSMHKVLWTLLPAA*SSPSAS Trigger: TGAGGCAGAAGGAGAGGACAAGGCTGCAGGCAGCAA...TGTCCATAATACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTATGGACAGGAGCTGGCGTAGGTTaGGTTGTCAGTGCCACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLKRAVSHFLSMHKVLWTGAGVG*VVSATS Trigger: GCTTGTGGCACTGACAACCAAACCTACGCCAGCTCC...TGTCCATAATACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAGCTTTCTTGGCCTCTaGGTTGTCTGCAGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRRHIYLKRAVSHFLSMHSFLGL*VVCSLP Trigger: AGGGAGGCTGCAGACAACCAAGAGGCCAAGAAAGCT...ATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGCTGTGCTCCCTTGAGTaGCCCTCATCTGAAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATYECIVSWLLVFLKRLKLCSLE*PSSEGS Trigger: TGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAG...CTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGTTTCCTTCCCACTaGCTGGTAGGCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ANKCFATYECIVSWLLVFLFPSH*LVGCSS Trigger: GGAGGAGCAGCCTACCAGCAAGTGGGAAGGAAACAG...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS CCA 90 bp | TCTTCTTCTTCCTCTTCTTCATTGGGAATGTCTGGATCTTGTGTCTaGCTTTCTTCAGCCTTTAAGTCTTGGGTTTGCTTGCTGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSSLGMSGSCV*LSSAFKSWVCLLLS Trigger: TGAAAGCAGCAAGCAAACCCAAGACTTAAAGGCTGAAGAAAGCCAGACACAAGATCCAGACATTCCCAATGAAGAAGAGGAAGAAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTGCCAGCTTTCCCTTCTaGGTCCTGCTGCTCTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: ANKCFATYECIVSWLLVFASFPF*VLLLCM Trigger: CATACAGAGCAGCAGGACCAAGAAGGGAAAGCTGGC...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTATGGACATCAGTGTCCTTCTGGTaGCCAATAGCTTCAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLKRAVSHFLSMHKVLWTSVSFW*PIASRP Trigger: TGGCCTTGAAGCTATTGGCAACCAGAAGGACACTGA...TGTCCATAATACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATGCATGAGGATGTTTTaGAGCCAGTCTCTCATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RHIYLKRAVSHFLSMHKVCMRMF*SQSLIR Trigger: GCGGATGAGAGACTGGCTCAAAAACATCCTCATGCA...TACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAGTGATGTGCTTATCCTaGTTGGGGTCACACTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGGIFISKEQYLTSSACIVMCLS*LGSHSS Trigger: TGAGGAGTGTGACCCCAACAAGGATAAGCACATCAC...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTATGGACAAAGTCTTGGGTTTGCTaGCTGCTTTCATTCGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLKRAVSHFLSMHKVLWTKSWVC*LLSFGC Trigger: GCAACCGAATGAAAGCAGCAAGCAAACCCAAGACTT...TGTCCATAATACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGCGGTTAAAGGTTTCCTTGCTCAGATaGATGCTTCTCTGTCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATYECIVSWLLVFLKRLKVSLLR*MLLCLA Trigger: AGCAAGACAGAGAAGCATCAATCTGAGCAAGGAAAC...CTTTAACCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGGAGCTCTCAGCTTTCTaGGCCTCTTGGTTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KCFATYECIVSWLLVFLKELSAF*ASWLSA Trigger: TGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCTC...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTACTGAAGGTTCAGCATTaGGTGAGCTCTCAGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RHIYLKRAVSHFLSMHKVLKVQH*VSSQLS Trigger: AGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAG...TACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATAAGGTATTATGGACAGTGTCCCCTTTTACATaGGAAGTTCGTGCAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: YLKRAVSHFLSMHKVLWTVSPFT*EVRART Trigger: GGTTCTTGCACGAACTTCCAATGTAAAAGGGGACAC...TGTCCATAATACCTTATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGGTAATCCAGCTGCAGTaGGTGTCCCTTTTTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KCFATYECIVSWLLVFLKVIQLQ*VSLFGP Trigger: GGGACCAAAAAGGGACACCAACTGCAGCTGGATTAC...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS CCA 90 bp | TTTGCTTCTTTGCTTTTCATTGAGATAGCCGCCATGTTTGGGATTTaGTTCATAAAGCTGCATGAGGATGTTTTTGAGCCAGTCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FASLLFIEIAAMFGI*FIKLHEDVFEPVSH Trigger: ATGAGAGACTGGCTCAAAAACATCCTCATGCAGCTTTATGAACCAAATCCCAAACATGGCGGCTATCTCAATGAAAAGCAAAGAAGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGGGTCAGAGAGAAACCTaGTACTTGTCGGGATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KCFATYECIVSWLLVFLKGQRET*YLSGLP Trigger: TGGCAATCCCGACAAGTACAAGGTTTCTCTCTGACC...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGCCCTTGGTTTCCTaGCTCAGATTGATGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ANKCFATYECIVSWLLVFLPLVS*LRLMLL Trigger: GAGAAGCATCAATCTGAGCAAGGAAACCAAGGGCAG...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATATTTTGTCCTGCTCTGTaGACTGTTCATGAGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGGIFISKEQYLTSSACIFCPAL*TVHEFP Trigger: AGGAAACTCATGAACAGTCAACAGAGCAGGACAAAA...TATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ANKCFATYECIVSWLLVFMCLSL*GSHSSK Trigger: CTTTGAGGAGTGTGACCCCAACAAGGATAAGCACAT...AAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTTGTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAATGTTTTGCTACATATGAATGTATAGTGTCATGGCTGCTCGTATTTCTGAAGGAAGGTTTTTCAGCCTaGTCACTGGGATGGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KCFATYECIVSWLLVFLKEGFSA*SLGWFS Trigger: AGAAAACCATCCCAGTGACAAGGCTGAAAAACCTTC...CTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAAAACATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAGGCATATTTATCTCAAAAGAGCAGTATCTCACTTCCTCAGCATGCATTTTGACTTTGCTTCTTaGCTTTTCATTGAGATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRRHIYLKRAVSHFLSMHFDFAS*LFIEIA Trigger: GGCTATCTCAATGAAAAGCAAAGAAGCAAAGTCAAA...ATGCATGCTGAGGAAGTGAGATACTGCTCTTTTGAGATAAATATGCCTCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS CAA 72 bp | GGTAGGCTGCTCCTCCAGAGGTTCTTTTCCCTCCTCTaGGTTATCACTGGGGGCACCAATGTCTTCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRLLLQRFFSLL*VITGGTNVFRL Trigger: GAGCCGGAAGACATTGGTGCCCCCAGTGATAACCAAGAGGAGGGAAAAGAACCTCTGGAGGAGCAGCCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
||
| CDS CAA 90 bp | GAAGGTTCAGCATTTGGTGAGCTCTCAGCTTTCTTGGCCTCTTGGTaGTCTGCAGCCTCCCTCCGGTTCTCACTCTCGCCAGTCGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EGSAFGELSAFLASW*SAASLRFSLSPVVV Trigger: GACAACGACTGGCGAGAGTGAGAACCGGAGGGAGGCTGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCTCACCAAATGCTGAACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS TCA 72 bp | TCTCGCCAGTCGTTGTCTCCTCGCCGCCGCCATATTTaGGGTAATAGGAGAGGGAATGCATCCTTTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRQSLSPRRRHI*GNRRGNASFRP Trigger: AGGCCGAAAGGATGCATTCCCTCTCCTATTACCTCAAATATGGCGGCGGCGAGGAGACAACGACTGGCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
||
| CDS GCA 72 bp | CCTTGTTGGGGTCACACTCCTCAAAGAAGCGAGTTATaGAGTGTTCCATGGGCACCAGGGAAGCTCGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PCWGHTPQRSEL*SVPWAPGKLAE Trigger: CTCTGCGAGCTTCCCTGGTGCCCATGGAACACTGCATAACTCGCTTCTTTGAGGAGTGTGACCCCAACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CCA 72 bp | GTAGGCTGCTCCTCCAGAGGTTCTTTTCCCTCCTCTTaGTTATCACTGGGGGCACCAATGTCTTCCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VGCSSRGSFPSS*LSLGAPMSSGS Trigger: AGAGCCGGAAGACATTGGTGCCCCCAGTGATAACCAAGAGGAGGGAAAAGAACCTCTGGAGGAGCAGCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 90 bp | GCTTTCCCTTCTTGGTCCTGCTGCTCTGTATGTGGAATGTGTTCCTaGCTGCCTGCAGCCTTGTCCTCTCCTTCTGCCTCAGAGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: AFPSWSCCSVCGMCS*LPAALSSPSASESL Trigger: GAGTGACTCTGAGGCAGAAGGAGAGGACAAGGCTGCAGGCAGCAAGGAACACATTCCACATACAGAGCAGCAGGACCAAGAAGGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | TTGCCCTCATCTGAAGGTTCAGCATTTGGTGAGCTCTCAGCTTTCTaGGCCTCTTGGTTGTCTGCAGCCTCCCTCCGGTTCTCACTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LPSSEGSAFGELSAF*ASWLSAASLRFSLS Trigger: CGAGAGTGAGAACCGGAGGGAGGCTGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGATGAGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS GCA 72 bp | CTGCTGCTCTGTATGTGGAATGTGTTCCTTGCTGCCTaGAGCCTTGTCCTCTCCTTCTGCCTCAGAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: LLLCMWNVFLAA*SLVLSFCLRVT Trigger: AGTGACTCTGAGGCAGAAGGAGAGGACAAGGCTGCAGGCAGCAAGGAACACATTCCACATACAGAGCAGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | GCGTCTTCCGGTGTCACCAGTGTTGCAGTAGTTGGGTaGGAGTGGTCAGAGAGAAACCTTGTACTTGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: ASSGVTSVAVVG*EWSERNLVLVG Trigger: CCCGACAAGTACAAGGTTTCTCTCTGACCACTCCAACCCAACTACTGCAACACTGGTGACACCGGAAGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 72 bp | TCTGAAGGTTCAGCATTTGGTGAGCTCTCAGCTTTCTaGGCCTCTTGGTTGTCTGCAGCCTCCCTCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SEGSAFGELSAF*ASWLSAASLRF Trigger: GAACCGGAGGGAGGCTGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | GGGACTGTAGCGTCTTCCGGTGTCACCAGTGTTGCAGTAGTTGGGTaGGAGTGGTCAGAGAGAAACCTTGTACTTGTCGGGATTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: GTVASSGVTSVAVVG*EWSERNLVLVGIAT Trigger: TGTGGCAATCCCGACAAGTACAAGGTTTCTCTCTGACCACTCCAACCCAACTACTGCAACACTGGTGACACCGGAAGACGCTACAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 90 bp | TCGGTAGGTTCTGTGGAAACGGCCTTCTCATCAGTGTCCTTCTGGTaGCCAATAGCTTCAAGGCCAGCTTTCCCTTCTTGGTCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVGSVETAFSSVSFW*PIASRPAFPSWSCC Trigger: GCAGCAGGACCAAGAAGGGAAAGCTGGCCTTGAAGCTATTGGCAACCAGAAGGACACTGATGAGAAGGCCGTTTCCACAGAACCTACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | CAGCACTGTGCTCCCTTGAGTTGCCCTCATCTGAAGGTTCAGCATTaGGTGAGCTCTCAGCTTTCTTGGCCTCTTGGTTGTCTGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QHCAPLSCPHLKVQH*VSSQLSWPLGCLQP Trigger: AGGCTGCAGACAACCAAGAGGCCAAGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS GCA 72 bp | AATGGGGACTGTAGCGTCTTCCGGTGTCACCAGTGTTaGAGTAGTTGGGTTGGAGTGGTCAGAGAGAAACCT | + |
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Preference number: 6 (lower is better) Translates to: NGDCSVFRCHQC*SSWVGVVREKP Trigger: AGGTTTCTCTCTGACCACTCCAACCCAACTACTGCAACACTGGTGACACCGGAAGACGCTACAGTCCCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CCA 72 bp | TCCGGTGTCACCAGTGTTGCAGTAGTTGGGTTGGAGTaGTCAGAGAGAAACCTTGTACTTGTCGGGATTGCC | + |
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Preference number: 6 (lower is better) Translates to: SGVTSVAVVGLE*SERNLVLVGIA Trigger: GGCAATCCCGACAAGTACAAGGTTTCTCTCTGACCACTCCAACCCAACTACTGCAACACTGGTGACACCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 72 bp | CTCCTGACTCTCCTTTCCCTTTGTGATGTTTGCGCGTaGGTTAGGATCCACATAGGAAGTGGACACGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LLTLLSLCDVCA*VRIHIGSGHGR Trigger: GCGACCGTGTCCACTTCCTATGTGGATCCTAACCAACGCGCAAACATCACAAAGGGAAAGGAGAGTCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 90 bp | AGTGTCCTTCTGGTTGCCAATAGCTTCAAGGCCAGCTTTCCCTTCTaGGTCCTGCTGCTCTGTATGTGGAATGTGTTCCTTGCTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVLLVANSFKASFPF*VLLLCMWNVFLAAC Trigger: GCAGGCAGCAAGGAACACATTCCACATACAGAGCAGCAGGACCAAGAAGGGAAAGCTGGCCTTGAAGCTATTGGCAACCAGAAGGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | GACTCTTCTAAGGTGTCATCAGATTGCTCTCTGTTTCCTTCCCACTaGCTGGTAGGCTGCTCCTCCAGAGGTTCTTTTCCCTCCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DSSKVSSDCSLFPSH*LVGCSSRGSFPSSW Trigger: CCAAGAGGAGGGAAAAGAACCTCTGGAGGAGCAGCCTACCAGCAAGTGGGAAGGAAACAGAGAGCAATCTGATGACACCTTAGAAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | TTCTGCCTCAGAGTCACTCTCCTGCCCTTGGTTTCCTTGCTCAGATaGATGCTTCTCTGTCTTGCTTATCTGAGTGGGCTGACTGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: FCLRVTLLPLVSLLR*MLLCLAYLSGLTGL Trigger: GAGTCCAGTCAGCCCACTCAGATAAGCAAGACAGAGAAGCATCAATCTGAGCAAGGAAACCAAGGGCAGGAGAGTGACTCTGAGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS TCA 72 bp | GCGGGGAAATCGCCGTTCTCCGGGAGACTTTTCTGTTaGGGCTCACTTGTACCTTCTTGTAGATCCAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AGKSPFSGRLFC*GSLVPSCRSSV Trigger: AACACTGGATCTACAAGAAGGTACAAGTGAGCCTCAACAGAAAAGTCTCCCGGAGAACGGCGATTTCCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS GCA 72 bp | GATTGCTCTCTGTTTCCTTCCCACTTGCTGGTAGGCTaGTCCTCCAGAGGTTCTTTTCCCTCCTCTTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: DCSLFPSHLLVG*SSRGSFPSSWL Trigger: TAACCAAGAGGAGGGAAAAGAACCTCTGGAGGAGCAGCCTACCAGCAAGTGGGAAGGAAACAGAGAGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS GCA 72 bp | ATAGCTTCAAGGCCAGCTTTCCCTTCTTGGTCCTGCTaGTCTGTATGTGGAATGTGTTCCTTGCTGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IASRPAFPSWSC*SVCGMCSLLPA Trigger: TGCAGGCAGCAAGGAACACATTCCACATACAGAGCAGCAGGACCAAGAAGGGAAAGCTGGCCTTGAAGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | TCTGTGGAAACGGCCTTCTCATCAGTGTCCTTCTGGTaGCCAATAGCTTCAAGGCCAGCTTTCCCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVETAFSSVSFW*PIASRPAFPSW Trigger: CCAAGAAGGGAAAGCTGGCCTTGAAGCTATTGGCAACCAGAAGGACACTGATGAGAAGGCCGTTTCCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | GCTCCCTTGAGTTGCCCTCATCTGAAGGTTCAGCATTaGGTGAGCTCTCAGCTTTCTTGGCCTCTTGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: APLSCPHLKVQH*VSSQLSWPLGC Trigger: ACAACCAAGAGGCCAAGAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | AAGTTCGTGCAAGAACCAGCACTGTGCTCCCTTGAGTaGCCCTCATCTGAAGGTTCAGCATTTGGTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KFVQEPALCSLE*PSSEGSAFGEL Trigger: GAGCTCACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAGTGCTGGTTCTTGCACGAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | CGGGGAAATCGCCGTTCTCCGGGAGACTTTTCTGTTGAGGCTCACTaGTACCTTCTTGTAGATCCAGTGTTAGTGTTCCTTCCGTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RGNRRSPGDFSVEAH*YLLVDPVLVFLPLD Trigger: ATCCAACGGAAGGAACACTAACACTGGATCTACAAGAAGGTACAAGTGAGCCTCAACAGAAAAGTCTCCCGGAGAACGGCGATTTCCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 90 bp | CCCTTTTACATTGGAAGTTCGTGCAAGAACCAGCACTGTGCTCCCTaGAGTTGCCCTCATCTGAAGGTTCAGCATTTGGTGAGCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PFYIGSSCKNQHCAP*SCPHLKVQHLVSSQ Trigger: CTGAGAGCTCACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAGTGCTGGTTCTTGCACGAACTTCCAATGTAAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | ACAAGCAGGAATAGATTTGCAAGCTCCGAAGTAATCCAGCTGCAGTaGGTGTCCCTTTTTGGTCCCCTCCAGCCTGCACTTGGTAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TSRNRFASSEVIQLQ*VSLFGPLQPALGSK Trigger: TTTGCTACCAAGTGCAGGCTGGAGGGGACCAAAAAGGGACACCAACTGCAGCTGGATTACTTCGGAGCTTGCAAATCTATTCCTGCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | CCAAAGCAGTGGCCCCATTCCTTCAAGGTGATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAGAAGCGAGTTATGCAGTGTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PKQWPHSFKVMCLSL*GSHSSKKRVMQCSM Trigger: CATGGAACACTGCATAACTCGCTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCTTGAAGGAATGGGGCCACTGCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS TCA 72 bp | GCAGGGGGACAAGTCTCTGGATCTTGGCAAACACAGTaGGGTTTCCCTTGTGGATCGGTTTTGCAAATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGGQVSGSWQTQ*GFPCGSVLQMC Trigger: ACACATTTGCAAAACCGATCCACAAGGGAAACCTCACTGTGTTTGCCAAGATCCAGAGACTTGTCCCCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS GCA 72 bp | AGGTTGCTCCTGACTCTCCTTTCCCTTTGTGATGTTTaGGCGTTGGTTAGGATCCACATAGGAAGTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: RLLLTLLSLCDV*ALVRIHIGSGH Trigger: GTGTCCACTTCCTATGTGGATCCTAACCAACGCGCAAACATCACAAAGGGAAAGGAGAGTCAGGAGCAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS GCA 72 bp | GCAAGTTCAGAGTGTGTCAAGATCCTGTCTGCAGGATaGTGGTCCAGTTCATTAAACTGCCAGTGCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASSECVKILSAG*WSSSLNCQCTG Trigger: TCCTGTGCACTGGCAGTTTAATGAACTGGACCAGCATCCTGCAGACAGGATCTTGACACACTCTGAACTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CCA 72 bp | TGTAGCGTCTTCCGGTGTCACCAGTGTTGCAGTAGTTaGGTTGGAGTGGTCAGAGAGAAACCTTGTACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSVFRCHQCCSS*VGVVREKPCTC Trigger: ACAAGTACAAGGTTTCTCTCTGACCACTCCAACCCAACTACTGCAACACTGGTGACACCGGAAGACGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 72 bp | AGAGTCACTCTCCTGCCCTTGGTTTCCTTGCTCAGATaGATGCTTCTCTGTCTTGCTTATCTGAGTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVTLLPLVSLLR*MLLCLAYLSGL Trigger: CAGCCCACTCAGATAAGCAAGACAGAGAAGCATCAATCTGAGCAAGGAAACCAAGGGCAGGAGAGTGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | ATTGGAAGTTCGTGCAAGAACCAGCACTGTGCTCCCTaGAGTTGCCCTCATCTGAAGGTTCAGCATTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IGSSCKNQHCAP*SCPHLKVQHLV Trigger: CACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAGTGCTGGTTCTTGCACGAACTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | TGGCCCCATTCCTTCAAGGTGATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAGAAGCGAGTTATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPHSFKVMCLSL*GSHSSKKRVMQ Trigger: CTGCATAACTCGCTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCTTGAAGGAATGGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | CAGTGGCCCCATTCCTTCAAGGTGATGTGCTTATCCTaGTTGGGGTCACACTCCTCAAAGAAGCGAGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: QWPHSFKVMCLS*LGSHSSKKRVM Trigger: CATAACTCGCTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCTTGAAGGAATGGGGCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | TTACATTGGAAGTTCGTGCAAGAACCAGCACTGTGCTCCCTTGAGTaGCCCTCATCTGAAGGTTCAGCATTTGGTGAGCTCTCAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LHWKFVQEPALCSLE*PSSEGSAFGELSAF Trigger: GAAAGCTGAGAGCTCACCAAATGCTGAACCTTCAGATGAGGGCAACTCAAGGGAGCACAGTGCTGGTTCTTGCACGAACTTCCAATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 90 bp | ATTCCAAAGCAGTGGCCCCATTCCTTCAAGGTGATGTGCTTATCCTaGTTGGGGTCACACTCCTCAAAGAAGCGAGTTATGCAGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IPKQWPHSFKVMCLS*LGSHSSKKRVMQCS Trigger: GGAACACTGCATAACTCGCTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCTTGAAGGAATGGGGCCACTGCTTTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS GCA 72 bp | ATTCCAAAGCAGTGGCCCCATTCCTTCAAGGTGATGTaGTTATCCTTGTTGGGGTCACACTCCTCAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IPKQWPHSFKVM*LSLLGSHSSKK Trigger: CTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCTTGAAGGAATGGGGCCACTGCTTTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | TTCTGCCTCAGAGTCACTCTCCTGCCCTTGGTTTCCTaGCTCAGATTGATGCTTCTCTGTCTTGCTTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: FCLRVTLLPLVS*LRLMLLCLAYL Trigger: CAGATAAGCAAGACAGAGAAGCATCAATCTGAGCAAGGAAACCAAGGGCAGGAGAGTGACTCTGAGGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | TTTGGTTGTCAGTGCCACAAGCCTGATCTAGGATTTTaGCAGGGGGACAAGTCTCTGGATCTTGGCAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: FGCQCHKPDLGF*QGDKSLDLGKH Trigger: GTGTTTGCCAAGATCCAGAGACTTGTCCCCCTGCAAAAATCCTAGATCAGGCTTGTGGCACTGACAACCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS GCA 72 bp | TGTGTCTGGCTTTCTTCAGCCTTTAAGTCTTGGGTTTaGTTGCTGCTTTCATTCGGTTGCTGGTGTGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CVWLSSAFKSWV*LLLSFGCWCES Trigger: TGACTCACACCAGCAACCGAATGAAAGCAGCAAGCAAACCCAAGACTTAAAGGCTGAAGAAAGCCAGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CCA 72 bp | GATGCTTCTCTGTCTTGCTTATCTGAGTGGGCTGACTaGACTCTTCTAAGGTGTCATCAGATTGCTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DASLSCLSEWAD*TLLRCHQIALC Trigger: ACAGAGAGCAATCTGATGACACCTTAGAAGAGTCCAGTCAGCCCACTCAGATAAGCAAGACAGAGAAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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| CDS CAA 72 bp | GTCTGGCTTTCTTCAGCCTTTAAGTCTTGGGTTTGCTaGCTGCTTTCATTCGGTTGCTGGTGTGAGTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: VWLSSAFKSWVC*LLSFGCWCESL Trigger: AAGTGACTCACACCAGCAACCGAATGAAAGCAGCAAGCAAACCCAAGACTTAAAGGCTGAAGAAAGCCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CCA 72 bp | CCTCTTCTTCGTCCTCTTCTTCTTCCTCTTCTTCATTaGGAATGTCTGGATCTTGTGTCTGGCTTTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLRPLLLPLLH*ECLDLVSGFLQ Trigger: CTGAAGAAAGCCAGACACAAGATCCAGACATTCCCAATGAAGAAGAGGAAGAAGAAGAGGACGAAGAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CCA 72 bp | TCCTCTTCTTCATTGGGAATGTCTGGATCTTGTGTCTaGCTTTCTTCAGCCTTTAAGTCTTGGGTTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSLGMSGSCV*LSSAFKSWVCL Trigger: CAAGCAAACCCAAGACTTAAAGGCTGAAGAAAGCCAGACACAAGATCCAGACATTCCCAATGAAGAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CAA 72 bp | TCCTCTTCTTCGTCCTCTTCTTCTTCCTCTTCTTCATaGGGAATGTCTGGATCTTGTGTCTGGCTTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSSSSSS*GMSGSCVWLSS Trigger: TGAAGAAAGCCAGACACAAGATCCAGACATTCCCAATGAAGAAGAGGAAGAAGAAGAGGACGAAGAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031249.8 ENSMUST00000199947.2 |
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| CDS CCA 72 bp | TTGCTTTTCATTGAGATAGCCGCCATGTTTGGGATTTaGTTCATAAAGCTGCATGAGGATGTTTTTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLFIEIAAMFGI*FIKLHEDVFEP Trigger: TGGCTCAAAAACATCCTCATGCAGCTTTATGAACCAAATCCCAAACATGGCGGCTATCTCAATGAAAAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031249.8 |
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