Pregenerated sensors for SPARC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018593Ensembl transcript IDs: ENSMUST00000018737.13, ENSMUST00000108858.8, ENSMUST00000141530.2, ENSMUST00000213866.2, ENSMUST00000214685.2, ENSMUST00000216313.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAGGCTGTaGATGGGCCATGGCCTCAGAGTTATGTGGGAAAATGCTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: TQPVRHWVVQGTRRL*MGHGLRVMWENAVT Trigger: AGTCACAGCATTTTCCCACATAACTCTGAGGCCATGGCCCATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR TCA 90 bp | GAGTCTGTCATGTGTGCCACAGCTCTGGATTATTCTGTCTTTCCTTaGCCTAGGCTACTAAGACTTGCCATGTGGGTTCTGACTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: ESVMCATALDYSVFP*PRLLRLAMWVLTGG Trigger: CCCACCAGTCAGAACCCACATGGCAAGTCTTAGTAGCCTAGGTCAAGGAAAGACAGAATAATCCAGAGCTGTGGCACACATGACAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR GCA 90 bp | ATGAAAGCTAGAGATATCTCCTCGTGCTTGTGGACGGTGAGCTTATaGAACTCCGTTTCCAACACAGCCAGTGAGACACTGGGTAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: MKARDISSCLWTVSL*NSVSNTASETLGSA Trigger: TGCACTACCCAGTGTCTCACTGGCTGTGTTGGAAACGGAGTTGCATAAGCTCACCGTCCACAAGCACGAGGAGATATCTCTAGCTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR CCA 90 bp | CAGGGGACCAGGAGGCTGTGGATGGGCCATGGCCTCAGAGTTATGTaGGAAAATGCTGTGACTTGGGTTCTAGTTTCTTTCTTACTTTGT | + |
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Preference number: 1 (lower is better) Translates to: QGTRRLWMGHGLRVM*ENAVTWVLVSFLLC Trigger: ACAAAGTAAGAAAGAAACTAGAACCCAAGTCACAGCATTTTCCCACATAACTCTGAGGCCATGGCCCATCCACAGCCTCCTGGTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR TCA 90 bp | CAGCTTTTTCATGAAATGCTTGGAGGGGAACAATTTCTCAGCCTGTaGGATCTGACCATTCCGTTGGCTTGGAAGTTTCTCTTGATTAGT | + |
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Preference number: 1 (lower is better) Translates to: QLFHEMLGGEQFLSL*DLTIPLAWKFLLIS Trigger: ACTAATCAAGAGAAACTTCCAAGCCAACGGAATGGTCAGATCTCACAGGCTGAGAAATTGTTCCCCTCCAAGCATTTCATGAAAAAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCTCTTGCCATGTGGGTTCTaGCTGGTGGGTCCTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: EKTARSRAAGSLSCVPQLLPCGF*LVGPQV Trigger: GACCTGAGGACCCACCAGTCAGAACCCACATGGCAA...GAGCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCGGGACCAGGAGGCTGTaGATGGGCCATGGCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PVSVTSLCLTPNHQGKKPGTRRL*MGHGLR Trigger: TCTGAGGCCATGGCCCATCCACAGCCTCCTGGTCCC...GGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR TCA 90 bp | TCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCAGCACAGAGTCTGGGTaGGTGTTAAGAGTCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: SRRQQGPGLLGVCHVCHSSTESG*VLRVKC Trigger: GCATTTGACTCTTAACACTCACCCAGACTCTGTGCT...GCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR TCA 90 bp | TCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCCCACATCCCCCAAAATaGAATAAGCACAGAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SRRQQGPGLLGVCHVCHSPHPPK*NKHRVW Trigger: CCAGACTCTGTGCTTATTTCATTTTGGGGGATGTGG...GCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACTTGCCATGTGGGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTCCAGGAGGCTGTGGATaGGCCATGGCCTCAGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: KTCHVGSDWWVLRSHSIFPGGCG*AMASEL Trigger: TAACTCTGAGGCCATGGCCCATCCACAGCCTCCTGG...AAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACCCACATGGCAAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR CAA 90 bp | CCAGTGCCTAGAGCTCCCGGCAAGAACCTGAAAGCCCAATTGCAGTaGAGTGATGTTCTGGCCCACCCATGGCTCACCAAAACTAAAACC | + |
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Preference number: 2 (lower is better) Translates to: PVPRAPGKNLKAQLQ*SDVLAHPWLTKTKT Trigger: GGTTTTAGTTTTGGTGAGCCATGGGTGGGCCAGAACATCACTCAACTGCAATTGGGCTTTCAGGTTCTTGCCGGGAGCTCTAGGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCGCTGTGGATGGGCCATaGCCTCAGAGTTATGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VCNFPLPNSKPPGEKAHIAVDGP*PQSYVG Trigger: TCCCACATAACTCTGAGGCCATGGCCCATCCACAGC...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACTTGCCATGTGGGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTGCTGTGGATGGGCCATaGCCTCAGAGTTATGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: KTCHVGSDWWVLRSHSIFAVDGP*PQSYVG Trigger: TCCCACATAACTCTGAGGCCATGGCCCATCCACAGC...AAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACCCACATGGCAAGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAACATGGAAAGAAACGCCCTAAGAGTCGAGAAGACAGCAAGGTCCCGGGCTCCACATCCCCCAAAATaGAATAAGCACAGAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PNMERNALRVEKTARSRAPHPPK*NKHRVW Trigger: CCAGACTCTGTGCTTATTTCATTTTGGGGGATGTGG...AGCCCGGGACCTTGCTGTCTTCTCGACTCTTAGGGCGTTTCTTTCCATGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTACCCAAATTTTGTACAGCACAGAGTCTGGGTaGGTGTTAAGAGTCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: GSDWWVLRSHSIFTQILYSTESG*VLRVKC Trigger: GCATTTGACTCTTAACACTCACCCAGACTCTGTGCT...GTACAAAATTTGGGTAAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCAGTTATGTGGGAAAATaGTGTGACTTGGGTTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: VCNFPLPNSKPPGEKAHISYVGK*CDLGSS Trigger: ACTAGAACCCAAGTCACAGCATTTTCCCACATAACT...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAATTTTGTACCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGCCTCAGAGTTATGTaGGAAAATGCTGTGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: PNFVPVSVTSLCLTPNHQGLRVM*ENAVTW Trigger: CCAAGTCACAGCATTTTCCCACATAACTCTGAGGCC...CTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGGTACAAAATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAATCAAACCAATTCACCAGTCTCACTTCCTCTACGTTACAACCTTTTCTGTGGAGTCTGTCATGTGTaGCACAGCTCTGGATTATTC | + |
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Preference number: 2 (lower is better) Translates to: KNQTNSPVSLPLRYNLFCGVCHV*HSSGLF Trigger: GAATAATCCAGAGCTGTGGCACACATGACAGACTCC...ACAGAAAAGGTTGTAACGTAGAGGAAGTGAGACTGGTGAATTGGTTTGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR GCA 72 bp | CGCCCTAAGAGTCGAGAAGACAGCAAGGTCCCGGGCTaGTGGGAGTCTGTCATGTGTGCCACAGCTCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: RPKSREDSKVPG*WESVMCATALD Trigger: ATCCAGAGCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGACTCTTAGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR CCA 72 bp | TATGCAACTCCGTTTCCAACACAGCCAGTGAGACACTaGGTAGTGCAGGGGACCAGGAGGCTGTGGATGGGC | + |
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Preference number: 3 (lower is better) Translates to: YATPFPTQPVRH*VVQGTRRLWMG Trigger: GCCCATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGAAACGGAGTTGCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR GCA 72 bp | CAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTaGCACAGCTCTGGATTATTCTGTCTTTCCTTGACC | + |
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Preference number: 3 (lower is better) Translates to: QQGPGLLGVCHV*HSSGLFCLSLT Trigger: GGTCAAGGAAAGACAGAATAATCCAGAGCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR CCA 72 bp | CCTAAGAGTCGAGAAGACAGCAAGGTCCCGGGCTGCTaGGAGTCTGTCATGTGTGCCACAGCTCTGGATTAT | + |
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Preference number: 3 (lower is better) Translates to: PKSREDSKVPGC*ESVMCATALDY Trigger: ATAATCCAGAGCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGACTCTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR CCA 72 bp | AGGAGGCTGTGGATGGGCCATGGCCTCAGAGTTATGTaGGAAAATGCTGTGACTTGGGTTCTAGTTTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: RRLWMGHGLRVM*ENAVTWVLVSF Trigger: GAAAGAAACTAGAACCCAAGTCACAGCATTTTCCCACATAACTCTGAGGCCATGGCCCATCCACAGCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR CCA 72 bp | GCCCAATTGCAGTTGAGTGATGTTCTGGCCCACCCATaGCTCACCAAAACTAAAACCAACAGCCAAACATGG | + |
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Preference number: 3 (lower is better) Translates to: AQLQLSDVLAHP*LTKTKTNSQTW Trigger: CCATGTTTGGCTGTTGGTTTTAGTTTTGGTGAGCCATGGGTGGGCCAGAACATCACTCAACTGCAATTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR TCA 72 bp | ATGTGTGCCACAGCTCTGGATTATTCTGTCTTTCCTTaGCCTAGGCTACTAAGACTTGCCATGTGGGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: MCATALDYSVFP*PRLLRLAMWVL Trigger: CAGAACCCACATGGCAAGTCTTAGTAGCCTAGGTCAAGGAAAGACAGAATAATCCAGAGCTGTGGCACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR TCA 72 bp | CATGAAATGCTTGGAGGGGAACAATTTCTCAGCCTGTaGGATCTGACCATTCCGTTGGCTTGGAAGTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: HEMLGGEQFLSL*DLTIPLAWKFL Trigger: GAGAAACTTCCAAGCCAACGGAATGGTCAGATCTCACAGGCTGAGAAATTGTTCCCCTCCAAGCATTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR GCA 72 bp | TGCAAAACAGAAATGAAAGCTAGAGATATCTCCTCGTaGTTGTGGACGGTGAGCTTATGCAACTCCGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: CKTEMKARDISS*LWTVSLCNSVS Trigger: GGAAACGGAGTTGCATAAGCTCACCGTCCACAAGCACGAGGAGATATCTCTAGCTTTCATTTCTGTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR GCA 72 bp | TTTGCATGGTTAATGAGAAGCAGCTTTTTCATGAAATaGTTGGAGGGGAACAATTTCTCAGCCTGTGAGATC | + |
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Preference number: 3 (lower is better) Translates to: FAWLMRSSFFMK*LEGNNFSACEI Trigger: GATCTCACAGGCTGAGAAATTGTTCCCCTCCAAGCATTTCATGAAAAAGCTGCTTCTCATTAACCATGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| 3UTR GCA 72 bp | AAGACTTGTCAAGCTCTTCACATTGCTGTGAGAGTTTaGATGGTTAATGAGAAGCAGCTTTTTCATGAAATG | + |
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Preference number: 3 (lower is better) Translates to: KTCQALHIAVRV*MVNEKQLFHEM Trigger: CATTTCATGAAAAAGCTGCTTCTCATTAACCATGCAAACTCTCACAGCAATGTGAAGAGCTTGACAAGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR GCA 90 bp | TCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCTTCAGTCTGAGGGGCTaGCAGGGCCCTCCCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SRRQQGPGLLGVCHVCHSFSLRG*QGPPGQ Trigger: CTGGCCGGGAGGGCCCTGGCAGCCCCTCAGACTGAA...GCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108858.8 |
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| CDS-3UTR CCA 90 bp | TCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCGAGGGGAGCGCGCAGTaGGGCCAGCTCAGTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SRRQQGPGLLGVCHVCHSEGSAQ*GQLSVG Trigger: TCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTC...GCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR TCA 90 bp | GCAACTCCGTTTCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAATGTTCCATGGGGATaGGGGGAGCGCGCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ATPFPTQPVRHWVVQGTRNVPWG*GERAVG Trigger: CCCCACTGCGCGCTCCCCTCATCCCCATGGAACATT...CCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGAAACGGAGTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR GCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGAGTCTGCTGAGGGGCTaGCAGGGCCCTCCCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGSLLRG*QGPPGQ Trigger: CTGGCCGGGAGGGCCCTGGCAGCCCCTCAGCAGACT...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000018737.13 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | CCAAACATGGAAAGAAACGCCCTAAGAGTCGAGAAGACAGCAAGGTCCCGGGCTGAGGGGAGCGCGCAGTaGGGCCAGCTCAGTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PNMERNALRVEKTARSRAEGSAQ*GQLSVG Trigger: TCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTC...AGCCCGGGACCTTGCTGTCTTCTCGACTCTTAGGGCGTTTCTTTCCATGTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR GCA 90 bp | TCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCCACACATGGGGGTGTTaGTCTCGTCCAGCTCACACA | + |
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Preference number: 4 (lower is better) Translates to: SRRQQGPGLLGVCHVCHSHTWGC*SRPAHT Trigger: TGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTG...GCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CCA 90 bp | TCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCCATTTCCACCTGGACTaGGTTGGCACCCACAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SRRQQGPGLLGVCHVCHSHFHLD*VGTHRY Trigger: GTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATG...GCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGACCAGGAGGCTGTGGATGGGCCATGGCCTCAGAGTTATGTGGGAAATCTCAAACTCGCCAATaGGAGCAGGGCAGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CRGPGGCGWAMASELCGKSQTRQ*EQGSWW Trigger: CCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGA...TTTCCCACATAACTCTGAGGCCATGGCCCATCCACAGCCTCCTGGTCCCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGGAGGGGAGCGCGCAGTaGGGCCAGCTCAGTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGEGSAQ*GQLSVG Trigger: TCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTC...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR TCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGGCAACTTCAGTCTGCTaGGGGGCTGCCAGGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGATSVC*GAARAL Trigger: GAGGGCCCTGGCAGCCCCTCAGCAGACTGAAGTTGC...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000018737.13 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCTCGCTTCTGCTTCTCAGTaGGGAGGTTGTTGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: EKTARSRAAGSLSCVPQLASASQ*GGCCPH Trigger: ATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGC...GAGCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR TCA 90 bp | GCAACTCCGTTTCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGCCATCAATAGGGTGCTaGTCCAGCTGGCCAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: ATPFPTQPVRHWVVQGTRPSIGC*SSWPNC Trigger: GCAGTTTGGCCAGCTGGATCAGCACCCTATTGATGG...CCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGAAACGGAGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR GCA 90 bp | GGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTACCCAAATTTTGTACAGTCTGCTGAGGGGCTaGCAGGGCCCTCCCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSDWWVLRSHSIFTQILYSLLRG*QGPPGQ Trigger: CTGGCCGGGAGGGCCCTGGCAGCCCCTCAGCAGACT...GTACAAAATTTGGGTAAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018737.13 |
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| CDS-3UTR CCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTGGGAGCAGGGCAGCTaGTGGGGTCCTGGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGWEQGS*WGPGTH Trigger: GTGTGTGCCAGGACCCCACCAGCTGCCCTGCTCCCA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGTGGGAGCAGGGCAGCTaGTGGGGTCCTGGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGWEQGS*WGPGTH Trigger: GTGTGTGCCAGGACCCCACCAGCTGCCCTGCTCCCA...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAGGCTGTGGATCCAGGGTGCACTTGGTaGCAAAGAAGTGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTASETLGSAGDQEAVDPGCTW*QRSGRK Trigger: CTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGG...ATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCAACAGCTCCACGGGGTaGTCTCCAGCCTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VCNFPLPNSKPPGEKAHINSSTG*SPASRR Trigger: GCGCCTGGAGGCTGGAGACCACCCCGTGGAGCTGTT...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGAACAGCTCCACGGGGTaGTCTCCAGCCTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGNSSTG*SPASRR Trigger: GCGCCTGGAGGCTGGAGACCACCCCGTGGAGCTGTT...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR TCA 90 bp | GCAACTCCGTTTCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGGCTTCTGCTTCTCAGTaGGGAGGTTGTTGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATPFPTQPVRHWVVQGTRASASQ*GGCCPH Trigger: ATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGC...CCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGAAACGGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGAATGTTCCATGGGGATaGGGGGAGCGCGCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGNVPWG*GERAVG Trigger: CCCCACTGCGCGCTCCCCTCATCCCCATGGAACATT...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | TCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAGGCTGTGGATCTCGACCGTTTCCTCTaGACCGTCCTCAAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNTASETLGSAGDQEAVDLDRFL*TVLKFS Trigger: GGAGAATTTGAGGACGGTGCAGAGGAAACGGTCGAG...ATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGCAGCTGGTGGGGTCCTaGCACACACACATGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGQLVGS*HTHMGV Trigger: CACCCCCATGTGTGTGTGCCAGGACCCCACCAGCTG...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAAGTCTGCTGAGGGGCTaGCAGGGCCCTCCCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILSLLRG*QGPPGQ Trigger: CTGGCCGGGAGGGCCCTGGCAGCCCCTCAGCAGACT...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018737.13 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | GTCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCCAGCTCACACACCTTaGCATGTTTGCAATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VEKTARSRAAGSLSCVPQPAHTP*HVCNDG Trigger: ACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGG...CTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGGACCAGGAGGCTGTGGATGGGCCATGGCCTCAGAGTTATGTGGGAAATTCACACGCAGCTTCTaGTTCTCAGTGAGGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CRGPGGCGWAMASELCGKFTRSF*FSVRRL Trigger: CAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAA...TTTCCCACATAACTCTGAGGCCATGGCCCATCCACAGCCTCCTGGTCCCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | TCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAGGCTGTGGATTTCACACGCAGCTTCTaGTTCTCAGTGAGGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTASETLGSAGDQEAVDFTRSF*FSVRRL Trigger: CAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAA...ATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | GTCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGTCCTTGTTGATGTCCTaGTCCTTGATGCCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEKTARSRAAGSLSCVPQSLLMS*SLMPKQ Trigger: CTGCTTTGGCATCAAGGAGCAGGACATCAACAAGGA...CTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCGCTTGTGGCCCTTCTTaGTGCCCTCCAGGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VCNFPLPNSKPPGEKAHIACGPS*CPPGCT Trigger: AGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGC...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGCTTGTGGCCCTTCTTaGTGCCCTCCAGGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGACGPS*CPPGCT Trigger: AGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGC...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTACCCAAATTTTGTACAACAGCTCCACGGGGTaGTCTCCAGCCTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSDWWVLRSHSIFTQILYNSSTG*SPASRR Trigger: GCGCCTGGAGGCTGGAGACCACCCCGTGGAGCTGTT...GTACAAAATTTGGGTAAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTCCGTTTCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGACACCTTGCCATGTTTaGAATGATGGTTCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATPFPTQPVRHWVVQGTRTPCHV*NDGSGR Trigger: CCTGCCAGAACCATCATTGCAAACATGGCAAGGTGT...CCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGAAACGGAGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACATGGAAAGAAACGCCCTAAGAGTCGAGAAGACAGCAAGGTCCCGGGCTTCCAGCTGGCCAAACTaGCAGTGGACAGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PNMERNALRVEKTARSRASSWPN*QWTGKM Trigger: CATCTTCCCTGTCCACTGGCAGTTTGGCCAGCTGGA...AGCCCGGGACCTTGCTGTCTTCTCGACTCTTAGGGCGTTTCTTTCCATGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CCA 90 bp | CCAAATTTTGTACCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGTGGGAGCAGGGCAGCTaGTGGGGTCCTGGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PNFVPVSVTSLCLTPNHQWEQGS*WGPGTH Trigger: GTGTGTGCCAGGACCCCACCAGCTGCCCTGCTCCCA...CTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGGTACAAAATTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTCTCAAACTCGCCAATaGGAGCAGGGCAGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGSQTRQ*EQGSWW Trigger: CCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGTCTCAAACTCGCCAATaGGAGCAGGGCAGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGSQTRQ*EQGSWW Trigger: CCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGA...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGCCTCCAGGGTGCACTTaGTGGCAAAGAAGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGPPGCT*WQRSGR Trigger: CCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGG...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGAGGGGAGCGCGCAGTaGGGCCAGCTCAGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFEGSAQ*GQLSVG Trigger: TCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAGAGGGGAGCGCGCAGTaGGGCCAGCTCAGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILEGSAQ*GQLSVG Trigger: TCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTC...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| 3UTR CAA 72 bp | AGAGCTCCCGGCAAGAACCTGAAAGCCCAATTGCAGTaGAGTGATGTTCTGGCCCACCCATGGCTCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RAPGKNLKAQLQ*SDVLAHPWLTK Trigger: TTTGGTGAGCCATGGGTGGGCCAGAACATCACTCAACTGCAATTGGGCTTTCAGGTTCTTGCCGGGAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR TCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGCAACTTCAGTCTGCTaGGGGGCTGCCAGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFATSVC*GAARAL Trigger: GAGGGCCCTGGCAGCCCCTCAGCAGACTGAAGTTGC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018737.13 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR TCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAGCAACTTCAGTCTGCTaGGGGGCTGCCAGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILATSVC*GAARAL Trigger: GAGGGCCCTGGCAGCCCCTCAGCAGACTGAAGTTGC...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018737.13 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR TCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGCCATCAATAGGGTGCTaGTCCAGCTGGCCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGPSIGC*SSWPNC Trigger: GCAGTTTGGCCAGCTGGATCAGCACCCTATTGATGG...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR TCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGCCATCAATAGGGTGCTaGTCCAGCTGGCCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGPSIGC*SSWPNC Trigger: GCAGTTTGGCCAGCTGGATCAGCACCCTATTGATGG...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCCTCGACCGTTTCCTCTaGACCGTCCTCAAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVSVTSLCLTPNHQGKKPLDRFL*TVLKFS Trigger: GGAGAATTTGAGGACGGTGCAGAGGAAACGGTCGAG...GGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGCACACATGGGGGTGTTaGTCTCGTCCAGCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGHTWGC*SRPAHT Trigger: TGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTG...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGCACACATGGGGGTGTTaGTCTCGTCCAGCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGHTWGC*SRPAHT Trigger: TGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTG...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTCCAGCTGGCCAAACTaGCAGTGGACAGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGSSWPN*QWTGKM Trigger: CATCTTCCCTGTCCACTGGCAGTTTGGCCAGCTGGA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | AAGACTTGCCATGTGGGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTCATTTCCACCTGGACTaGGTTGGCACCCACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KTCHVGSDWWVLRSHSIFHFHLD*VGTHRY Trigger: GTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATG...AAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACCCACATGGCAAGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGCATTTCCACCTGGACTaGGTTGGCACCCACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGHFHLD*VGTHRY Trigger: GTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATG...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGCATTTCCACCTGGACTaGGTTGGCACCCACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGHFHLD*VGTHRY Trigger: GTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATG...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTATGGGAGCAGGGCAGCTaGTGGGGTCCTGGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILWEQGS*WGPGTH Trigger: GTGTGTGCCAGGACCCCACCAGCTGCCCTGCTCCCA...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGCCAGGGTGCACTTGGTaGCAAAGAAGTGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGPGCTW*QRSGRK Trigger: CTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGG...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAGCTCCACGGGGTaGTCTCCAGCCTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILNSSTG*SPASRR Trigger: GCGCCTGGAGGCTGGAGACCACCCCGTGGAGCTGTT...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAGGCTGTGGATTCTCAAAGAAACGTGTaGTGCAATGTTCCATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNTASETLGSAGDQEAVDSQRNV*CNVPWG Trigger: TCCCCATGGAACATTGCACCACACGTTTCTTTGAGA...ATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGCTTCTGCTTCTCAGTaGGGAGGTTGTTGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGASASQ*GGCCPH Trigger: ATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGC...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR TCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAAATGTTCCATGGGGATaGGGGGAGCGCGCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILNVPWG*GERAVG Trigger: CCCCACTGCGCGCTCCCCTCATCCCCATGGAACATT...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTACCCAAATTTTGTACCCTCCAGGGTGCACTTaGTGGCAAAGAAGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSDWWVLRSHSIFTQILYPPGCT*WQRSGR Trigger: CCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGG...GTACAAAATTTGGGTAAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCTTGCCATGTTTGCAATaGTGGTTCTGGCAGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCNFPLPNSKPPGEKAHILPCLQ*WFWQGL Trigger: CAACCCCTGCCAGAACCATCATTGCAAACATGGCAA...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR TCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTTGCCATGTTTGCAATaGTGGTTCTGGCAGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGLPCLQ*WFWQGL Trigger: CAACCCCTGCCAGAACCATCATTGCAAACATGGCAA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACACCTTGCCATGTTTaGAATGATGGTTCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSVTSLCLTPNHQGKKPTPCHV*NDGSGR Trigger: CCTGCCAGAACCATCATTGCAAACATGGCAAGGTGT...GGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGTTCACACGCAGCTTCTaGTTCTCAGTGAGGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGFTRSF*FSVRRL Trigger: CAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAA...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATTTTGTACCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGTCTCAAACTCGCCAATaGGAGCAGGGCAGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNFVPVSVTSLCLTPNHQSQTRQ*EQGSWW Trigger: CCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGA...CTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGGTACAAAATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTTGCCATGTGGGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTTTGGTGGCAAAGAAGTaGCAGGAAGAGTCGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTCHVGSDWWVLRSHSIFLVAKK*QEESKV Trigger: GACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAA...AAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACCCACATGGCAAGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCTTGGTGGCAAAGAAGTaGCAGGAAGAGTCGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCNFPLPNSKPPGEKAHILVAKK*QEESKV Trigger: GACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAA...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGCTTGTGGCCCTTCTTaGTGCCCTCCAGGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFACGPS*CPPGCT Trigger: AGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | AAGACTTGCCATGTGGGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTGGCGATGTATTTGCATaGTCCGATGTAGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTCHVGSDWWVLRSHSIFGDVFA*SDVVQV Trigger: CACCTGGACTACATCGGACCATGCAAATACATCGCC...AAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACCCACATGGCAAGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGCGATGTATTTGCATaGTCCGATGTAGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGGDVFA*SDVVQV Trigger: CACCTGGACTACATCGGACCATGCAAATACATCGCC...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGACACCTTGCCATGTTTaGAATGATGGTTCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGTPCHV*NDGSGR Trigger: CCTGCCAGAACCATCATTGCAAACATGGCAAGGTGT...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGCCAGCTCACACACCTTaGCATGTTTGCAATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGPAHTP*HVCNDG Trigger: ACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGG...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCTCCTTGTTGATGTCCTaGTCCTTGATGCCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCNFPLPNSKPPGEKAHISLLMS*SLMPKQ Trigger: CTGCTTTGGCATCAAGGAGCAGGACATCAACAAGGA...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTCCTTGTTGATGTCCTaGTCCTTGATGCCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGSLLMS*SLMPKQ Trigger: CTGCTTTGGCATCAAGGAGCAGGACATCAACAAGGA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTATCTCAAACTCGCCAATaGGAGCAGGGCAGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILSQTRQ*EQGSWW Trigger: CCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGA...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATTTTGTACCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGCCAGGGTGCACTTGGTaGCAAAGAAGTGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNFVPVSVTSLCLTPNHQPGCTW*QRSGRK Trigger: CTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGG...CTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGGTACAAAATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTACCTCCAGGGTGCACTTaGTGGCAAAGAAGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILPPGCT*WQRSGR Trigger: CCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGG...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTCCTCCAGGGTGCACTTaGTGGCAAAGAAGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFPPGCT*WQRSGR Trigger: CCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGG...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGCGCTTCTCATTCTCATaGATCTTCTTCACACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGTANHPNILNKGVMGGRFSFS*IFFTRS Trigger: GCTGCGTGTGAAGAAGATCCATGAGAATGAGAAGCG...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR TCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTCCATCAATAGGGTGCTaGTCCAGCTGGCCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFPSIGC*SSWPNC Trigger: GCAGTTTGGCCAGCTGGATCAGCACCCTATTGATGG...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTCACACATGGGGGTGTTaGTCTCGTCCAGCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFHTWGC*SRPAHT Trigger: TGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTG...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTACACACATGGGGGTGTTaGTCTCGTCCAGCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILHTWGC*SRPAHT Trigger: TGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTG...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTCCAGCTGGCCAAACTaGCAGTGGACAGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFSSWPN*QWTGKM Trigger: CATCTTCCCTGTCCACTGGCAGTTTGGCCAGCTGGA...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTACCAGGGTGCACTTGGTaGCAAAGAAGTGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILPGCTW*QRSGRK Trigger: CTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGG...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCTCTCAAAGAAACGTGTaGTGCAATGTTCCATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCNFPLPNSKPPGEKAHISQRNV*CNVPWG Trigger: TCCCCATGGAACATTGCACCACACGTTTCTTTGAGA...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGCTTCTGCTTCTCAGTaGGGAGGTTGTTGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFASASQ*GGCCPH Trigger: ATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | CTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTACCCAAATTTTGTACCTGTCGCTTCTCATTCTCATaGATCTTCTTCACACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTGGSSGLTASLPKFCTCRFSFS*IFFTRS Trigger: GCTGCGTGTGAAGAAGATCCATGAGAATGAGAAGCG...ACAGGTACAAAATTTGGGTAAAGATGCTGTGAGACCTGAGGACCCACCAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTTGCCATGTGGGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTAGGTCTTGTTGTCATTaGTGCATACCTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KTCHVGSDWWVLRSHSIFRSCCH*CIPSQT Trigger: AGTTTGAGAAGGTATGCAGCAATGACAACAAGACCT...AAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACCCACATGGCAAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCAGGTCTTGTTGTCATTaGTGCATACCTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VCNFPLPNSKPPGEKAHIRSCCH*CIPSQT Trigger: AGTTTGAGAAGGTATGCAGCAATGACAACAAGACCT...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGAGGTCTTGTTGTCATTaGTGCATACCTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGRSCCH*CIPSQT Trigger: AGTTTGAGAAGGTATGCAGCAATGACAACAAGACCT...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR GCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTATTCACACGCAGCTTCTaGTTCTCAGTGAGGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILFTRSF*FSVRRL Trigger: CAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAA...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTTGGTGGCAAAGAAGTaGCAGGAAGAGTCGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFLVAKK*QEESKV Trigger: GACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAA...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTATTGGTGGCAAAGAAGTaGCAGGAAGAGTCGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILLVAKK*QEESKV Trigger: GACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAA...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATCAAACCAATTCACCAGTCTCACTTCCTCTACGTTACAACCTTTTCTGTGCTTGTGGCCCTTCTTaGTGCCCTCCAGGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KNQTNSPVSLPLRYNLFCACGPS*CPPGCT Trigger: AGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGC...ACAGAAAAGGTTGTAACGTAGAGGAAGTGAGACTGGTGAATTGGTTTGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGGCGATGTATTTGCATaGTCCGATGTAGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFGDVFA*SDVVQV Trigger: CACCTGGACTACATCGGACCATGCAAATACATCGCC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAGGCGATGTATTTGCATaGTCCGATGTAGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILGDVFA*SDVVQV Trigger: CACCTGGACTACATCGGACCATGCAAATACATCGCC...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR GCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAACACCTTGCCATGTTTaGAATGATGGTTCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILTPCHV*NDGSGR Trigger: CCTGCCAGAACCATCATTGCAAACATGGCAAGGTGT...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR GCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTACCAGCTCACACACCTTaGCATGTTTGCAATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILPAHTP*HVCNDG Trigger: ACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGG...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR GCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTATCCTTGTTGATGTCCTaGTCCTTGATGCCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILSLLMS*SLMPKQ Trigger: CTGCTTTGGCATCAAGGAGCAGGACATCAACAAGGA...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR GCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTCCTTGTTGATGTCCTaGTCCTTGATGCCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFSLLMS*SLMPKQ Trigger: CTGCTTTGGCATCAAGGAGCAGGACATCAACAAGGA...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTACGCTTCTCATTCTCATaGATCTTCTTCACACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILRFSFS*IFFTRS Trigger: GCTGCGTGTGAAGAAGATCCATGAGAATGAGAAGCG...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR GCA 90 bp | AAACCAATTCACCAGTCTCACTTCCTCTACGTTACAACCTTTTCTGTCTTCCTCCCAGCTCACACACCTTaGCATGTTTGCAATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPIHQSHFLYVTTFSVFLPAHTP*HVCNDG Trigger: ACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGG...GAGGAAGACAGAAAAGGTTGTAACGTAGAGGAAGTGAGACTGGTGAATTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTCTCAAAGAAACGTGTaGTGCAATGTTCCATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFSQRNV*CNVPWG Trigger: TCCCCATGGAACATTGCACCACACGTTTCTTTGAGA...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTATCTCAAAGAAACGTGTaGTGCAATGTTCCATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILSQRNV*CNVPWG Trigger: TCCCCATGGAACATTGCACCACACGTTTCTTTGAGA...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| 3UTR CAA 72 bp | AAAACAGAAATGAAAGCTAGAGATATCTCCTCGTGCTaGTGGACGGTGAGCTTATGCAACTCCGTTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: KTEMKARDISSC*WTVSLCNSVSN Trigger: GTTGGAAACGGAGTTGCATAAGCTCACCGTCCACAAGCACGAGGAGATATCTCTAGCTTTCATTTCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR GCA 90 bp | AGTTATGTGGGAAAATGCTGTGACTTGGGTTCTAGTTTCTTTCTTACTTTGTTTTCCAGCTGGCCAAACTaGCAGTGGACAGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SYVGKCCDLGSSFFLTLFSSWPN*QWTGKM Trigger: CATCTTCCCTGTCCACTGGCAGTTTGGCCAGCTGGA...AAACAAAGTAAGAAAGAAACTAGAACCCAAGTCACAGCATTTTCCCACATAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR GCA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTAGGTCTTGTTGTCATTaGTGCATACCTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFRSCCH*CIPSQT Trigger: AGTTTGAGAAGGTATGCAGCAATGACAACAAGACCT...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR GCA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAAGGTCTTGTTGTCATTaGTGCATACCTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSTLSPGGTANHPNILRSCCH*CIPSQT Trigger: AGTTTGAGAAGGTATGCAGCAATGACAACAAGACCT...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CCA 90 bp | AGTTATGTGGGAAAATGCTGTGACTTGGGTTCTAGTTTCTTTCTTACTTTGTTTCGCTTCTCATTCTCATaGATCTTCTTCACACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYVGKCCDLGSSFFLTLFRFSFS*IFFTRS Trigger: GCTGCGTGTGAAGAAGATCCATGAGAATGAGAAGCG...AAACAAAGTAAGAAAGAAACTAGAACCCAAGTCACAGCATTTTCCCACATAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS CCA 90 bp | ACCTTCTCAAACTCGCCAATGGGAGCAGGGCAGCTGGTGGGGTCCTaGCACACACACATGGGGGTGTTGCTCTCGTCCAGCTCACACACC | + |
|
Preference number: 5 (lower is better) Translates to: TFSNSPMGAGQLVGS*HTHMGVLLSSSSHT Trigger: GGTGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTGTGTGCCAGGACCCCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | TGCTGCATACCTTCTCAAACTCGCCAATGGGAGCAGGGCAGCTGGTaGGGTCCTGGCACACACACATGGGGGTGTTGCTCTCGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCIPSQTRQWEQGSW*GPGTHTWGCCSRPA Trigger: AGCTGGACGAGAGCAACACCCCCATGTGTGTGTGCCAGGACCCCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGAAGGTATGCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | GAAACGTGTGGTGCAATGTTCCATGGGGATGAGGGGAGCGCGCAGTaGGGCCAGCTCAGTGTGGGACAGGTACCCATCAATAGGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETCGAMFHGDEGSAQ*GQLSVGQVPINRVL Trigger: CAGCACCCTATTGATGGGTACCTGTCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTCATCCCCATGGAACATTGCACCACACGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS GCA 90 bp | GTTCTGGCAGGGGTTGTCAGCCACCACCTCCTCGACCGTTTCCTCTaGACCGTCCTCAAATTCTCCCATTTCCACCTGGACTGGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLAGVVSHHLLDRFL*TVLKFSHFHLDWVG Trigger: GCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCAGAGGAAACGGTCGAGGAGGTGGTGGCTGACAACCCCTGCCAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | CCTCTGCACCGTCCTCAAATTCTCCCATTTCCACCTGGACTGGGTTaGCACCCACAGGTACCCCTGTCTCCTCCACCACGGTTTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PLHRPQILPFPPGLG*HPQVPLSPPPRFPP Trigger: AGGAGGAAACCGTGGTGGAGGAGACAGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | TCGACCGTTTCCTCTGCACCGTCCTCAAATTCTCCCATTTCCACCTaGACTGGGTTGGCACCCACAGGTACCCCTGTCTCCTCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: STVSSAPSSNSPIST*TGLAPTGTPVSSTT Trigger: CGTGGTGGAGGAGACAGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCAGAGGAAACGGTCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | TCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAGGCTGTGGATTTGATGTCCTGCTCCTaGATGCCAAAGCAGCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: SNTASETLGSAGDQEAVDLMSCS*MPKQPA Trigger: GGCCGGCTGCTTTGGCATCAAGGAGCAGGACATCAA...ATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS TCA 90 bp | GGGGTGTTGCTCTCGTCCAGCTCACACACCTTGCCATGTTTGCAATaGTGGTTCTGGCAGGGGTTGTCAGCCACCACCTCCTCGACCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVLLSSSSHTLPCLQ*WFWQGLSATTSSTV Trigger: AACGGTCGAGGAGGTGGTGGCTGACAACCCCTGCCAGAACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGGACGAGAGCAACACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS GCA 90 bp | TGCATGGTCCGATGTAGTCCAGGTGGAGCTTGTGGCCCTTCTTGGTaGCCTCCAGGGTGCACTTGGTGGCAAAGAAGTGGCAGGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CMVRCSPGGACGPSW*PPGCTWWQRSGRKS Trigger: ACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGACCATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | CGTTTCCTCTGCACCGTCCTCAAATTCTCCCATTTCCACCTGGACTaGGTTGGCACCCACAGGTACCCCTGTCTCCTCCACCACGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RFLCTVLKFSHFHLD*VGTHRYPCLLHHGF Trigger: GAAACCGTGGTGGAGGAGACAGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCAGAGGAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | TCCAACACAGCCAGTGAGACACTGGGTAGTGCAGGGGACCAGGAGGCTGTGGATGTGACCAGGACATTTTaGAGCCAGTCACGCATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SNTASETLGSAGDQEAVDVTRTF*SQSRMR Trigger: GCGCATGCGTGACTGGCTCAAAAATGTCCTGGTCAC...ATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS GCA 90 bp | ACATGGGGGTGTTGCTCTCGTCCAGCTCACACACCTTGCCATGTTTaGAATGATGGTTCTGGCAGGGGTTGTCAGCCACCACCTCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TWGCCSRPAHTPCHV*NDGSGRGCQPPPPR Trigger: TCGAGGAGGTGGTGGCTGACAACCCCTGCCAGAACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGGACGAGAGCAACACCCCCATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS GCA 90 bp | GGCACACACACATGGGGGTGTTGCTCTCGTCCAGCTCACACACCTTaGCATGTTTGCAATGATGGTTCTGGCAGGGGTTGTCAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GTHTWGCCSRPAHTP*HVCNDGSGRGCQPP Trigger: TGGTGGCTGACAACCCCTGCCAGAACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTGTGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS GCA 90 bp | TGTAGTCCAGGTGGAGCTTGTGGCCCTTCTTGGTGCCCTCCAGGGTaGACTTGGTGGCAAAGAAGTGGCAGGAAGAGTCGAAGGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSPGGACGPSWCPPG*TWWQRSGRKSRRSC Trigger: ACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS GCA 90 bp | GAGGGAATTCAGTCAGCTCGGAATCCAGGCAGGGGGCGATGTATTTaGATGGTCCGATGTAGTCCAGGTGGAGCTTGTGGCCCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGIQSARNPGRGRCI*MVRCSPGGACGPSW Trigger: CCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGACCATGCAAATACATCGCCCCCTGCCTGGATTCCGAGCTGACTGAATTCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | GGTGGAGCTTGTGGCCCTTCTTGGTGCCCTCCAGGGTGCACTTGGTaGCAAAGAAGTGGCAGGAAGAGTCGAAGGTCTTGTTGTCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGACGPSWCPPGCTW*QRSGRKSRRSCCHC Trigger: GCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | CCAGGTGGAGCTTGTGGCCCTTCTTGGTGCCCTCCAGGGTGCACTTaGTGGCAAAGAAGTGGCAGGAAGAGTCGAAGGTCTTGTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGGACGPSWCPPGCT*WQRSGRKSRRSCCH Trigger: ATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | ATTTGCATGGTCCGATGTAGTCCAGGTGGAGCTTGTGGCCCTTCTTaGTGCCCTCCAGGGTGCACTTGGTGGCAAAGAAGTGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ICMVRCSPGGACGPS*CPPGCTWWQRSGRK Trigger: CTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGACCATGCAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 90 bp | GAATTCAGTCAGCTCGGAATCCAGGCAGGGGGCGATGTATTTGCATaGTCCGATGTAGTCCAGGTGGAGCTTGTGGCCCTTCTTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EFSQLGIQAGGDVFA*SDVVQVELVALLGA Trigger: GGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGACCATGCAAATACATCGCCCCCTGCCTGGATTCCGAGCTGACTGAATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | GTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGGGGAAAAAGCCCACATCTCCACCTGGACTGGGTaGGCACCCACAGGTACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCNFPLPNSKPPGEKAHISTWTG*APTGTP Trigger: AGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGA...GATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CAA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTCCACCTGGACTGGGTaGGCACCCACAGGTACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGSTWTG*APTGTP Trigger: AGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AAGACTTGCCATGTGGGTTCTGACTGGTGGGTCCTCAGGTCTCACAGCATCTTTAGCTTGTGGCCCTTCTaGGTGCCCTCCAGGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KTCHVGSDWWVLRSHSIFSLWPF*VPSRVH Trigger: GTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCT...AAAGATGCTGTGAGACCTGAGGACCCACCAGTCAGAACCCACATGGCAAGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CAA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGAGCTTGTGGCCCTTCTaGGTGCCCTCCAGGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGGTANHPNILNKGVMGGSLWPF*VPSRVH Trigger: GTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCT...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGAGCTTGTGGCCCTTCTaGGTGCCCTCCAGGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGSLWPF*VPSRVH Trigger: GTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCT...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGCTCGAAGAGTCGAAGGTCTaGTTGTCATTGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: EKTARSRAAGSLSCVPQLEESKV*LSLLHT Trigger: GGTATGCAGCAATGACAACAAGACCTTCGACTCTTC...GAGCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CAA 90 bp | GTCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGGAAGAGTCGAAGGTCTaGTTGTCATTGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: VEKTARSRAAGSLSCVPQEESKV*LSLLHT Trigger: GGTATGCAGCAATGACAACAAGACCTTCGACTCTTC...CTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGCCCTCCAGGGTGCACTaGGTGGCAAAGAAGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGGTANHPNILNKGVMGGPSRVH*VAKKWQ Trigger: CTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGG...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGCCCTCCAGGGTGCACTaGGTGGCAAAGAAGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGPSRVH*VAKKWQ Trigger: CTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGG...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | GTCGAGAAGACAGCAAGGTCCCGGGCTGCTGGGAGTCTGTCATGTGTGCCACAGATCACCAGATCCTTGTaGATGTCCTGCTCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VEKTARSRAAGSLSCVPQITRSL*MSCSLM Trigger: CATCAAGGAGCAGGACATCAACAAGGATCTGGTGAT...CTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS CCA 90 bp | TGGCCCTTCTTGGTGCCCTCCAGGGTGCACTTGGTGGCAAAGAAGTaGCAGGAAGAGTCGAAGGTCTTGTTGTCATTGCTGCATACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WPFLVPSRVHLVAKK*QEESKVLLSLLHTF Trigger: GAAGGTATGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGGGGACCAGGAGGCTGTGGATGGGCCATGGCCTCAGAGTTATGTGGGAAAGAGTCGAAGGTCTTGTaGTCATTGCTGCATACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CRGPGGCGWAMASELCGKESKVL*SLLHTF Trigger: GAAGGTATGCAGCAATGACAACAAGACCTTCGACTC...TTTCCCACATAACTCTGAGGCCATGGCCCATCCACAGCCTCCTGGTCCCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTTGATGTCCTGCTCCTaGATGCCAAAGCAGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGLMSCS*MPKQPA Trigger: GGCCGGCTGCTTTGGCATCAAGGAGCAGGACATCAA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGTTGATGTCCTGCTCCTaGATGCCAAAGCAGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGGTANHPNILNKGVMGGLMSCS*MPKQPA Trigger: GGCCGGCTGCTTTGGCATCAAGGAGCAGGACATCAA...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTCCACCTGGACTGGGTaGGCACCCACAGGTACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFSTWTG*APTGTP Trigger: AGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGA...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGTCAGTGAGGAGGTTGTaGCCCTCATCTCTCTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGSVRRL*PSSLSY Trigger: GTACGAGAGAGATGAGGGCAACAACCTCCTCACTGA...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAATTCACCAGTCTCACTTCCTCTACGTTACAACCTTTTCTGTCTTCCTCTCCACCTGGACTGGGTaGGCACCCACAGGTACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPIHQSHFLYVTTFSVFLSTWTG*APTGTP Trigger: AGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGA...GAGGAAGACAGAAAAGGTTGTAACGTAGAGGAAGTGAGACTGGTGAATTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CAA 90 bp | CCAAATTTTGTACCTGTGTCTGTAACTTCCCTCTGCCTAACTCCAAACCACCAGACACACATGGGGGTGTaGCTCTCGTCCAGCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PNFVPVSVTSLCLTPNHQTHMGV*LSSSSH Trigger: GTGTGAGCTGGACGAGAGCAACACCCCCATGTGTGT...CTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGGTACAAAATTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CAA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTACCCTCCAGGGTGCACTaGGTGGCAAAGAAGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IYVSTLSPGGTANHPNILPSRVH*VAKKWQ Trigger: CTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGG...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACATGGAAAGAAACGCCCTAAGAGTCGAGAAGACAGCAAGGTCCCGGGCTATCACCAGATCCTTGTaGATGTCCTGCTCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PNMERNALRVEKTARSRAITRSL*MSCSLM Trigger: CATCAAGGAGCAGGACATCAACAAGGATCTGGTGAT...AGCCCGGGACCTTGCTGTCTTCTCGACTCTTAGGGCGTTTCTTTCCATGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGAGTCGAAGGTCTTGTaGTCATTGCTGCATACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGGTANHPNILNKGVMGGESKVL*SLLHTF Trigger: GAAGGTATGCAGCAATGACAACAAGACCTTCGACTC...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGGAAGAGTCGAAGGTCTaGTTGTCATTGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGEESKV*LSLLHT Trigger: GGTATGCAGCAATGACAACAAGACCTTCGACTCTTC...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGAAGAGTCGAAGGTCTaGTTGTCATTGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: PGGTANHPNILNKGVMGGEESKV*LSLLHT Trigger: GGTATGCAGCAATGACAACAAGACCTTCGACTCTTC...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTTGATGTCCTGCTCCTaGATGCCAAAGCAGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFLMSCS*MPKQPA Trigger: GGCCGGCTGCTTTGGCATCAAGGAGCAGGACATCAA...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGGGATCACCAGATCCTTGTaGATGTCCTGCTCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRNSQPSKHFKQGGNGRGITRSL*MSCSLM Trigger: CATCAAGGAGCAGGACATCAACAAGGATCTGGTGAT...CCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCGGAACAGCCAACCATCCAAACATTTTAAACAAGGGGGTAATGGGAGGGATCACCAGATCCTTGTaGATGTCCTGCTCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGGTANHPNILNKGVMGGITRSL*MSCSLM Trigger: CATCAAGGAGCAGGACATCAACAAGGATCTGGTGAT...CCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AAAATCAAACCAATTCACCAGTCTCACTTCCTCTACGTTACAACCTTTTCTGTCAGCTTGTGGCCCTTCTaGGTGCCCTCCAGGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KIKPIHQSHFLYVTTFSVSLWPF*VPSRVH Trigger: GTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCT...GACAGAAAAGGTTGTAACGTAGAGGAAGTGAGACTGGTGAATTGGTTTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
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| CDS-3UTR CAA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAGTGACCAGGACATTTTaGAGCCAGTCACGCATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: IYVSTLSPGGTANHPNILVTRTF*SQSRMR Trigger: GCGCATGCGTGACTGGCTCAAAAATGTCCTGGTCAC...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGTGACCAGGACATTTTaGAGCCAGTCACGCATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFVTRTF*SQSRMR Trigger: GCGCATGCGTGACTGGCTCAAAAATGTCCTGGTCAC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTATCAGTGAGGAGGTTGTaGCCCTCATCTCTCTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IYVSTLSPGGTANHPNILSVRRL*PSSLSY Trigger: GTACGAGAGAGATGAGGGCAACAACCTCCTCACTGA...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGAGTCGAAGGTCTTGTaGTCATTGCTGCATACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFESKVL*SLLHTF Trigger: GAAGGTATGCAGCAATGACAACAAGACCTTCGACTC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | AAATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTGAAGAGTCGAAGGTCTaGTTGTCATTGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: KSMLAPYPQAEQPTIQTFEESKV*LSLLHT Trigger: GGTATGCAGCAATGACAACAAGACCTTCGACTCTTC...AAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS-3UTR CAA 90 bp | ATCTATGTTAGCACCTTATCCCCAGGCGGAACAGCCAACCATCCAAACATTTTAATCACCAGATCCTTGTaGATGTCCTGCTCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IYVSTLSPGGTANHPNILITRSL*MSCSLM Trigger: CATCAAGGAGCAGGACATCAACAAGGATCTGGTGAT...TAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS-3UTR CAA 90 bp | AGTTATGTGGGAAAATGCTGTGACTTGGGTTCTAGTTTCTTTCTTACTTTGTTTGTGACCAGGACATTTTaGAGCCAGTCACGCATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SYVGKCCDLGSSFFLTLFVTRTF*SQSRMR Trigger: GCGCATGCGTGACTGGCTCAAAAATGTCCTGGTCAC...AAACAAAGTAAGAAAGAAACTAGAACCCAAGTCACAGCATTTTCCCACATAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATCAAACCAATTCACCAGTCTCACTTCCTCTACGTTACAACCTTTTCTGTTCAGTGAGGAGGTTGTaGCCCTCATCTCTCTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KNQTNSPVSLPLRYNLFCSVRRL*PSSLSY Trigger: GTACGAGAGAGATGAGGGCAACAACCTCCTCACTGA...ACAGAAAAGGTTGTAACGTAGAGGAAGTGAGACTGGTGAATTGGTTTGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 |
||
| CDS CCA 72 bp | GGTGCAATGTTCCATGGGGATGAGGGGAGCGCGCAGTaGGGCCAGCTCAGTGTGGGACAGGTACCCATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GAMFHGDEGSAQ*GQLSVGQVPIN Trigger: ATTGATGGGTACCTGTCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTCATCCCCATGGAACATTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 72 bp | CAGCTGGTGGGGTCCTGGCACACACACATGGGGGTGTaGCTCTCGTCCAGCTCACACACCTTGCCATGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLVGSWHTHMGV*LSSSSHTLPCL Trigger: CAAACATGGCAAGGTGTGTGAGCTGGACGAGAGCAACACCCCCATGTGTGTGTGCCAGGACCCCACCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 90 bp | TCCTCTGCACCGTCCTCAAATTCTCCCATTTCCACCTGGACTGGGTaGGCACCCACAGGTACCCCTGTCTCCTCCACCACGGTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSAPSSNSPISTWTG*APTGTPVSSTTVSS Trigger: GGAGGAAACCGTGGTGGAGGAGACAGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS GCA 72 bp | CAGTCAGCTCGGAATCCAGGCAGGGGGCGATGTATTTaGATGGTCCGATGTAGTCCAGGTGGAGCTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSARNPGRGRCI*MVRCSPGGACG Trigger: GCCACAAGCTCCACCTGGACTACATCGGACCATGCAAATACATCGCCCCCTGCCTGGATTCCGAGCTGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS CCA 72 bp | TGCACCGTCCTCAAATTCTCCCATTTCCACCTGGACTaGGTTGGCACCCACAGGTACCCCTGTCTCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CTVLKFSHFHLD*VGTHRYPCLLH Trigger: GTGGAGGAGACAGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS CCA 72 bp | TCCTCTGCACCGTCCTCAAATTCTCCCATTTCCACCTaGACTGGGTTGGCACCCACAGGTACCCCTGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSAPSSNSPIST*TGLAPTGTPVS Trigger: GGAGACAGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS CCA 72 bp | GCTTGTGGCCCTTCTTGGTGCCCTCCAGGGTGCACTTaGTGGCAAAGAAGTGGCAGGAAGAGTCGAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ACGPSWCPPGCT*WQRSGRKSRRS Trigger: AGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS CCA 72 bp | GTCCGATGTAGTCCAGGTGGAGCTTGTGGCCCTTCTTaGTGCCCTCCAGGGTGCACTTGGTGGCAAAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VRCSPGGACGPS*CPPGCTWWQRS Trigger: ACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS CCA 72 bp | CAGCTCGGAATCCAGGCAGGGGGCGATGTATTTGCATaGTCCGATGTAGTCCAGGTGGAGCTTGTGGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLGIQAGGDVFA*SDVVQVELVAL Trigger: AAGGGCCACAAGCTCCACCTGGACTACATCGGACCATGCAAATACATCGCCCCCTGCCTGGATTCCGAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
||
| CDS CCA 72 bp | TTCTTCTCAAAGTCTCGGGCCAACAGCTCCACGGGGTaGTCTCCAGCCTCCAGGCGCTTCTCATTCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: FFSKSRANSSTG*SPASRRFSFSW Trigger: CCATGAGAATGAGAAGCGCCTGGAGGCTGGAGACCACCCCGTGGAGCTGTTGGCCCGAGACTTTGAGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 90 bp | TCCAGGTGGAGCTTGTGGCCCTTCTTGGTGCCCTCCAGGGTGCACTaGGTGGCAAAGAAGTGGCAGGAAGAGTCGAAGGTCTTGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SRWSLWPFLVPSRVH*VAKKWQEESKVLLS Trigger: TGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS TCA 72 bp | CTCTCGTCCAGCTCACACACCTTGCCATGTTTGCAATaGTGGTTCTGGCAGGGGTTGTCAGCCACCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSSSSHTLPCLQ*WFWQGLSATTS Trigger: GGAGGTGGTGGCTGACAACCCCTGCCAGAACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGGACGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS GCA 72 bp | TGTTGCTCTCGTCCAGCTCACACACCTTGCCATGTTTaGAATGATGGTTCTGGCAGGGGTTGTCAGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: CCSRPAHTPCHV*NDGSGRGCQPP Trigger: TGGTGGCTGACAACCCCTGCCAGAACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGGACGAGAGCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS GCA 72 bp | ACATGGGGGTGTTGCTCTCGTCCAGCTCACACACCTTaGCATGTTTGCAATGATGGTTCTGGCAGGGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: TWGCCSRPAHTP*HVCNDGSGRGC Trigger: ACAACCCCTGCCAGAACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGGACGAGAGCAACACCCCCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CCA 72 bp | TTGGTGCCCTCCAGGGTGCACTTGGTGGCAAAGAAGTaGCAGGAAGAGTCGAAGGTCTTGTTGTCATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVPSRVHLVAKK*QEESKVLLSLL Trigger: CAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 72 bp | TTCACACGCAGCTTCTGCTTCTCAGTGAGGAGGTTGTaGCCCTCATCTCTCTCGTACAAGGTGACCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: FTRSFCFSVRRL*PSSLSYKVTRT Trigger: TGTCCTGGTCACCTTGTACGAGAGAGATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 72 bp | TTCTTCACACGCAGCTTCTGCTTCTCAGTGAGGAGGTaGTTGCCCTCATCTCTCTCGTACAAGGTGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: FFTRSFCFSVRR*LPSSLSYKVTR Trigger: CCTGGTCACCTTGTACGAGAGAGATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 90 bp | AGGTTGTTGCCCTCATCTCTCTCGTACAAGGTGACCAGGACATTTTaGAGCCAGTCACGCATGCGCAGAGGGAATTCAGTCAGCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: RLLPSSLSYKVTRTF*SQSRMRRGNSVSSE Trigger: TTCCGAGCTGACTGAATTCCCTCTGCGCATGCGTGACTGGCTCAAAAATGTCCTGGTCACCTTGTACGAGAGAGATGAGGGCAACAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS TCA 72 bp | CATGGATCTTCTTCACACGCAGCTTCTGCTTCTCAGTaGGGAGGTTGTTGCCCTCATCTCTCTCGTACAAGG | + |
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Preference number: 6 (lower is better) Translates to: HGSSSHAASASQ*GGCCPHLSRTR Trigger: CCTTGTACGAGAGAGATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAAGAAGATCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 90 bp | TGGATCTTCTTCACACGCAGCTTCTGCTTCTCAGTGAGGAGGTTGTaGCCCTCATCTCTCTCGTACAAGGTGACCAGGACATTTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: WIFFTRSFCFSVRRL*PSSLSYKVTRTFLS Trigger: GCTCAAAAATGTCCTGGTCACCTTGTACGAGAGAGATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAAGAAGATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 90 bp | TCATGGATCTTCTTCACACGCAGCTTCTGCTTCTCAGTGAGGAGGTaGTTGCCCTCATCTCTCTCGTACAAGGTGACCAGGACATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SWIFFTRSFCFSVRR*LPSSLSYKVTRTFL Trigger: CAAAAATGTCCTGGTCACCTTGTACGAGAGAGATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAAGAAGATCCATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 72 bp | GTGGCAAAGAAGTGGCAGGAAGAGTCGAAGGTCTTGTaGTCATTGCTGCATACCTTCTCAAACTCGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: VAKKWQEESKVL*SLLHTFSNSPM Trigger: CATTGGCGAGTTTGAGAAGGTATGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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| CDS CAA 72 bp | TTGGTGGCAAAGAAGTGGCAGGAAGAGTCGAAGGTCTaGTTGTCATTGCTGCATACCTTCTCAAACTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVAKKWQEESKV*LSLLHTFSNSP Trigger: TGGCGAGTTTGAGAAGGTATGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018737.13 ENSMUST00000108858.8 ENSMUST00000141530.2 ENSMUST00000213866.2 ENSMUST00000214685.2 ENSMUST00000216313.2 |
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