Pregenerated sensors for SPAG8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066196Ensembl transcript IDs: ENSMUST00000084646.11, ENSMUST00000107870.3, ENSMUST00000149575.8
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGTGGGCCCGGAGCCCTaGCTAGGCTCAGAGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINVGPEP*LGSELW Trigger: CCAGAGCTCTGAGCCTAGCCAGGGCTCCGGGCCCAC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR GCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGTCAGCACAGAGTACTaGGCCGGAGCCTCGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINVSTEY*AGASAG Trigger: CCCTGCCGAGGCTCCGGCGCAGTACTCTGTGCTGAC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGTGACTGGGGCTGCGTaGTCAGCAGACCCTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINVTGAA*SADPGV Trigger: GACACCAGGGTCTGCTGACCACGCAGCCCCAGTCAC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR TCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGCCGTGCTGCCCGCTaGATCCAGAAGGTTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINSRAAR*IQKVSG Trigger: GCCTGAAACCTTCTGGATTCAGCGGGCAGCACGGCT...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR TCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACCCCTGCCCTCCTCCCTaGCAGGCAAGGGAAGATATT | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINPCPPP*QAREDI Trigger: AATATCTTCCCTTGCCTGTCAGGGAGGAGGGCAGGG...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR GCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACCGGGCGTCGAGAAGCTaGAGTTCTTCCGGAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINRASRS*SSSGMV Trigger: CACCATTCCGGAAGAACTGCAGCTTCTCGACGCCCG...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACCTCACATGGCTCACATaGCCCGAGTGCTCCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINLTWLT*PECSRF Trigger: GAACCTGGAGCACTCGGGCCATGTGAGCCATGTGAG...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGAAGACATGGGTGACTaGGGCTGCGTGGTCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINEDMGD*GCVVSR Trigger: TCTGCTGACCACGCAGCCCCAGTCACCCATGTCTTC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR TCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACAACCCATGGCCTCTATaGTGGGCTGGAGGGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNNPWPL*WAGGQG Trigger: ACCCTGCCCTCCAGCCCATCATAGAGGCCATGGGTT...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR TCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGATCAGCCCTGGAGCTaGGGTCTGCCATATTACAGG | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINDQPWS*GLPYYR Trigger: CCTGTAATATGGCAGACCTCAGCTCCAGGGCTGATC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR GCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACGGCTGGAGGGCAGGGTaGCCCGTAAAGACTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNGWRAG*PVKTVR Trigger: TCTGACAGTCTTTACGGGGCACCCTGCCCTCCAGCC...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR GCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACCTGGCCACGTGGCCGTaGTTTACAGAGAGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINLATWP*FTESFL Trigger: GAGGAAACTCTCTGTAAAGCACGGCCACGTGGCCAG...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACTTCACATGGCTCACATaGCTCACATGGCCCGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINFTWLT*LTWPEC Trigger: GCACTCGGGCCATGTGAGCCATGTGAGCCATGTGAA...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGATCCAGCTGGTTGGTaGCTCTCTCTTCCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINDPAGW*LSLPPS Trigger: ACTGGGAGGAAGAGAGAGCCACCAACCAGCTGGATC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGGAGCATCTCCAGCATaGCTTCACGCTTCCCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINGASPA*LHASLE Trigger: TTCGAGGGAAGCGTGAAGCCATGCTGGAGATGCTCC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR TCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACTCTCACTCCAGGTTCTaGGACTTGCAGAGGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINSHSRF*DLQRFP Trigger: TGGGAACCTCTGCAAGTCTCAGAACCTGGAGTGAGA...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR TCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACTGCAATGGAGGGATTTaGTCCAGCTGGTTGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINCNGGI*SSWLVA Trigger: AGCCACCAACCAGCTGGATCAAATCCCTCCATTGCA...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR TCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACCCCTGCCCTCCTCCCTaGCAGGCAAGGGAAGATATT | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNPCPPP*QAREDI Trigger: AATATCTTCCCTTGCCTGTCAGGGAGGAGGGCAGGG...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR GCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGGTTCCTGCTCTGCCTaGACCTCTTTACAGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINGSCSA*TSLQIW Trigger: CCAGATCTGTAAAGAGGTGCAGGCAGAGCAGGAACC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR GCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACCTCAAAGAGCTTCCTTaGAGGTTCCTGCTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINLKELP*RFLLCL Trigger: CAGGCAGAGCAGGAACCTGCAAGGAAGCTCTTTGAG...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR GCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACCGGGCGTCGAGAAGCTaGAGTTCTTCCGGAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNRASRS*SSSGMV Trigger: CACCATTCCGGAAGAACTGCAGCTTCTCGACGCCCG...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR CCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACGTGGTCAGCAGACCCTaGTGTCCGTGTCGGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNVVSRP*CPCRKK Trigger: CTTCTTCCGACACGGACACCAGGGTCTGCTGACCAC...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR GCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACTGCAGGTTCCTGCTCTaGCTGCACCTCTTTACAGAT | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINCRFLL*LHLFTD Trigger: ATCTGTAAAGAGGTGCAGGCAGAGCAGGAACCTGCA...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR GCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACCAGAAGGTTTCAGGCTaGTCCTTTGTTGAGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINQKVSG*SFVEAG Trigger: TCCTGCCTCAACAAAGGAGCAGCCTGAAACCTTCTG...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149575.8 |
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| CDS-3UTR CCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACCTAGGCTCAGAGCTCTaGCCAAGACCACAAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNLGSEL*PRPQVP Trigger: TGGCACTTGTGGTCTTGGCCAGAGCTCTGAGCCTAG...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACCTCAGATTCAGCCTCTaGAGGTTCACATGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINLRFSL*RFTWLT Trigger: TGTGAGCCATGTGAACCTCCAGAGGCTGAATCTGAG...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACGCAGTTCTTCCGGAATaGTGTGTCCAGTGTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PSSGTENQLHPIYLCSINAVLPE*CVQCPD Trigger: ATCAGGACACTGGACACACCATTCCGGAAGAACTGC...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR GCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACCTCAAAGAGCTTCCTTaGAGGTTCCTGCTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNLKELP*RFLLCL Trigger: CAGGCAGAGCAGGAACCTGCAAGGAAGCTCTTTGAG...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR CCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACTTTGATCCAGCTGGTTaGTGGCTCTCTCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNFDPAG*WLSLPP Trigger: GGGAGGAAGAGAGAGCCACCAACCAGCTGGATCAAA...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR GCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACCCAGGTCAACTGGGATaGATCTGTACCCTTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNPGQLG*ICTLEE Trigger: TTCCTCAAGGGTACAGATGCATCCCAGTTGACCTGG...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR GCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACTGCAGGTTCCTGCTCTaGCTGCACCTCTTTACAGAT | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNCRFLL*LHLFTD Trigger: ATCTGTAAAGAGGTGCAGGCAGAGCAGGAACCTGCA...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR CCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACGAGTGCTCCAGGTTCTaGAGGTTTATATGGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNECSRF*RFIWPS Trigger: AGAGGGCCATATAAACCTCCAGAACCTGGAGCACTC...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACATGTGTCTTGGGAGCTaGTATGAGTCTCTCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNMCLGS*YESLWV Trigger: CACCCAGAGAGACTCATACCAGCTCCCAAGACACAT...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CCA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACCTAGTCTTTCGGAGCTaGGCTGTACATCACAAGATC | + |
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Preference number: 4 (lower is better) Translates to: SGTENQLHPIYLCSINRNLVFRS*AVHHKI Trigger: GATCTTGTGATGTACAGCCCAGCTCCGAAAGACTAG...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS CCA 90 bp | GCAGGCCCAGAGGTGGGCCCGGAGCCCTGGCTAGGCTCAGAGCTCTaGCCAAGACCACAAGTGCCAGAGCCAGAGCCATGCACAGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: AGPEVGPEPWLGSEL*PRPQVPEPEPCTEL Trigger: TAGCTCTGTGCATGGCTCTGGCTCTGGCACTTGTGGTCTTGGCCAGAGCTCTGAGCCTAGCCAGGGCTCCGGGCCCACCTCTGGGCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS TCA 90 bp | CCGTGCTGCCCGCTGAATCCAGAAGGTTTCAGGCTGCTCCTTTGTTaGGGCAGGAGGCGCTGCTCGTACCAGCTCCACTCTGTAGTCATG | + |
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Preference number: 5 (lower is better) Translates to: PCCPLNPEGFRLLLC*GRRRCSYQLHSVVM Trigger: CATGACTACAGAGTGGAGCTGGTACGAGCAGCGCCTCCTGCCTCAACAAAGGAGCAGCCTGAAACCTTCTGGATTCAGCGGGCAGCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149575.8 |
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| CDS CCA 90 bp | AGCTGGTATGAGTCTCTCTGGGTGGTGCTAGAAGACATGGGTGACTaGGGCTGCGTGGTCAGCAGACCCTGGTGTCCGTGTCGGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SWYESLWVVLEDMGD*GCVVSRPWCPCRKK Trigger: CTTCTTCCGACACGGACACCAGGGTCTGCTGACCACGCAGCCCCAGTCACCCATGTCTTCTAGCACCACCCAGAGAGACTCATACCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 90 bp | GGTGGCTCTCTCTTCCTCCCAGTTGTAGAGGAGGCACTGGCCACGTaGCCGTGCTTTACAGAGAGTTTCCTCAGATTCAGCCTCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GGSLFLPVVEEALAT*PCFTESFLRFSLWR Trigger: CCTCCAGAGGCTGAATCTGAGGAAACTCTCTGTAAAGCACGGCCACGTGGCCAGTGCCTCCTCTACAACTGGGAGGAAGAGAGAGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS TCA 90 bp | CCAGAAGGTTTCAGGCTGCTCCTGGCGGTAATCATGAGGCTTTGTTaGGGCAGGAGGCGCTGCTCGTACCAGCTCCACTCTGTAGTCATG | + |
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Preference number: 5 (lower is better) Translates to: PEGFRLLLAVIMRLC*GRRRCSYQLHSVVM Trigger: CATGACTACAGAGTGGAGCTGGTACGAGCAGCGCCTCCTGCCTCAACAAAGCCTCATGATTACCGCCAGGAGCAGCCTGAAACCTTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS GCA 90 bp | CTGAAAGCCAAACCCATGGCCTCTATGATGGGCTGGAGGGCAGGGTaGCCCGTAAAGACTGTCAGAAGAGGGCTCTGTCAGCACAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: LKAKPMASMMGWRAG*PVKTVRRGLCQHRV Trigger: TACTCTGTGCTGACAGAGCCCTCTTCTGACAGTCTTTACGGGGCACCCTGCCCTCCAGCCCATCATAGAGGCCATGGGTTTGGCTTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 90 bp | CCTGCACCTCTTTACAGATCTGGTGTCGCAGGAGCATCTCCAGCATaGCTTCACGCTTCCCTCGAAGTGGCTGACAGATGTGTCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: PAPLYRSGVAGASPA*LHASLEVADRCVLG Trigger: TCCCAAGACACATCTGTCAGCCACTTCGAGGGAAGCGTGAAGCCATGCTGGAGATGCTCCTGCGACACCAGATCTGTAAAGAGGTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 90 bp | TGCTTTACAGAGAGTTTCCTCAGATTCAGCCTCTGGAGGTTCACATaGCTCACATGGCTCACATGGCCCGAGTGCTCCAGGTTCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CFTESFLRFSLWRFT*LTWLTWPECSRFWR Trigger: CCTCCAGAACCTGGAGCACTCGGGCCATGTGAGCCATGTGAGCCATGTGAACCTCCAGAGGCTGAATCTGAGGAAACTCTCTGTAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 90 bp | GAGAGTTTCCTCAGATTCAGCCTCTGGAGGTTCACATGGCTCACATaGCTCACATGGCCCGAGTGCTCCAGGTTCTGGAGGTTTATATGG | + |
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Preference number: 5 (lower is better) Translates to: ESFLRFSLWRFTWLT*LTWPECSRFWRFIW Trigger: CCATATAAACCTCCAGAACCTGGAGCACTCGGGCCATGTGAGCCATGTGAGCCATGTGAACCTCCAGAGGCTGAATCTGAGGAAACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 90 bp | CTGGTGTCCGTGTCGGAAGAAGTAACTCTCAGAGCCATCTTGCAATaGAGGGATTTGATCCAGCTGGTTGGTGGCTCTCTCTTCCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LVSVSEEVTLRAILQ*RDLIQLVGGSLFLP Trigger: TGGGAGGAAGAGAGAGCCACCAACCAGCTGGATCAAATCCCTCCATTGCAAGATGGCTCTGAGAGTTACTTCTTCCGACACGGACACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS GCA 90 bp | TCTGTAGTCATGGTGTGTTACCGACTCGGTCTCAAAGAGCTTCCTTaGAGGTTCCTGCTCTGCCTGCACCTCTTTACAGATCTGGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: SVVMVCYRLGLKELP*RFLLCLHLFTDLVS Trigger: CGACACCAGATCTGTAAAGAGGTGCAGGCAGAGCAGGAACCTGCAAGGAAGCTCTTTGAGACCGAGTCGGTAACACACCATGACTACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 ENSMUST00000149575.8 |
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| CDS-3UTR CAA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAATCATGAGGCTTTGTaGAGGCAGGAGGCGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: PSSGTENQLHPIYLCSINNHEAL*RQEALL Trigger: GAGCAGCGCCTCCTGCCTCAACAAAGCCTCATGATT...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS-3UTR CAA 90 bp | CCCTCATCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACTCTCAAAGAGCTTCCTaGCAGGTTCCTGCTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PSSGTENQLHPIYLCSINSQRAS*QVPALP Trigger: AGGCAGAGCAGGAACCTGCAAGGAAGCTCTTTGAGA...GTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGATGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR CAA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACTTTCAGGCTGCTCCTTaGTTGAGGCAGGAGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SGTENQLHPIYLCSINRNFQAAP*LRQEAL Trigger: CAGCGCCTCCTGCCTCAACAAAGGAGCAGCCTGAAA...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149575.8 |
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| CDS-3UTR CAA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACTCTCAAAGAGCTTCCTaGCAGGTTCCTGCTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SGTENQLHPIYLCSINRNSQRAS*QVPALP Trigger: AGGCAGAGCAGGAACCTGCAAGGAAGCTCTTTGAGA...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS-3UTR CAA 90 bp | TCGGGGACAGAGAATCAACTCCATCCAATCTACCTCTGTAGTATAAACAGAAACGATGCATCTGTACCCTaGAGGAATGCAGGTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SGTENQLHPIYLCSINRNDASVP*RNAGAE Trigger: TTCAGCACCTGCATTCCTCAAGGGTACAGATGCATC...GTTTCTGTTTATACTACAGAGGTAGATTGGATGGAGTTGATTCTCTGTCCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084646.11 |
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| CDS GCA 72 bp | CTCTGGGTGGTGCTAGAAGACATGGGTGACTGGGGCTaGGTGGTCAGCAGACCCTGGTGTCCGTGTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LWVVLEDMGDWG*VVSRPWCPCRK Trigger: CTTCCGACACGGACACCAGGGTCTGCTGACCACGCAGCCCCAGTCACCCATGTCTTCTAGCACCACCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS GCA 72 bp | AGACTGTCAGAAGAGGGCTCTGTCAGCACAGAGTACTaGGCCGGAGCCTCGGCAGGGGCAGTAGACCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: RLSEEGSVSTEY*AGASAGAVDLG Trigger: TCCTAGGTCTACTGCCCCTGCCGAGGCTCCGGCGCAGTACTCTGTGCTGACAGAGCCCTCTTCTGACAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | GAGTCTCTCTGGGTGGTGCTAGAAGACATGGGTGACTaGGGCTGCGTGGTCAGCAGACCCTGGTGTCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: ESLWVVLEDMGD*GCVVSRPWCPC Trigger: ACACGGACACCAGGGTCTGCTGACCACGCAGCCCCAGTCACCCATGTCTTCTAGCACCACCCAGAGAGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | GGGCACGGGCGTCGAGAAGCTGCAGTTCTTCCGGAATaGTGTGTCCAGTGTCCTGATGTCACTGACACCCGG | + |
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Preference number: 6 (lower is better) Translates to: GHGRREAAVLPE*CVQCPDVTDTR Trigger: CCGGGTGTCAGTGACATCAGGACACTGGACACACCATTCCGGAAGAACTGCAGCTTCTCGACGCCCGTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS CAA 72 bp | TCCTCCCTGACAGGCAAGGGAAGATATTACCCCCACTaGGTGGGGGCCGCTCTCAAGCTCGTAAGGCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSLTGKGRYYPH*VGAALKLVRQG Trigger: CCCTTGCCTTACGAGCTTGAGAGCGGCCCCCACCAAGTGGGGGTAATATCTTCCCTTGCCTGTCAGGGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000149575.8 |
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| CDS CAA 72 bp | CCCGCTGAATCCAGAAGGTTTCAGGCTGCTCCTTTGTaGAGGCAGGAGGCGCTGCTCGTACCAGCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: PAESRRFQAAPL*RQEALLVPAPL Trigger: GAGTGGAGCTGGTACGAGCAGCGCCTCCTGCCTCAACAAAGGAGCAGCCTGAAACCTTCTGGATTCAGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149575.8 |
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| CDS CAA 90 bp | GCCGTGCTGCCCGCTGAATCCAGAAGGTTTCAGGCTGCTCCTTTGTaGAGGCAGGAGGCGCTGCTCGTACCAGCTCCACTCTGTAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: AVLPAESRRFQAAPL*RQEALLVPAPLCSH Trigger: ATGACTACAGAGTGGAGCTGGTACGAGCAGCGCCTCCTGCCTCAACAAAGGAGCAGCCTGAAACCTTCTGGATTCAGCGGGCAGCACGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149575.8 |
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| CDS GCA 72 bp | AAACCCATGGCCTCTATGATGGGCTGGAGGGCAGGGTaGCCCGTAAAGACTGTCAGAAGAGGGCTCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: KPMASMMGWRAG*PVKTVRRGLCQ Trigger: CTGACAGAGCCCTCTTCTGACAGTCTTTACGGGGCACCCTGCCCTCCAGCCCATCATAGAGGCCATGGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | CTCAGATTCAGCCTCTGGAGGTTCACATGGCTCACATaGCTCACATGGCCCGAGTGCTCCAGGTTCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRFSLWRFTWLT*LTWPECSRFWR Trigger: CCTCCAGAACCTGGAGCACTCGGGCCATGTGAGCCATGTGAGCCATGTGAACCTCCAGAGGCTGAATCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CAA 72 bp | TTTCAGGCTGCTCCTGGCGGTAATCATGAGGCTTTGTaGAGGCAGGAGGCGCTGCTCGTACCAGCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: FQAAPGGNHEAL*RQEALLVPAPL Trigger: GAGTGGAGCTGGTACGAGCAGCGCCTCCTGCCTCAACAAAGCCTCATGATTACCGCCAGGAGCAGCCTGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS TCA 72 bp | CTGATGTCACTGACACCCGGTAGCCGTGCTGCCCGCTaGATCCAGAAGGTTTCAGGCTGCTCCTTTGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LMSLTPGSRAAR*IQKVSGCSFVE Trigger: CTCAACAAAGGAGCAGCCTGAAACCTTCTGGATTCAGCGGGCAGCACGGCTACCGGGTGTCAGTGACATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149575.8 |
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| CDS CCA 72 bp | GAGAGTTTCCTCAGATTCAGCCTCTGGAGGTTCACATaGCTCACATGGCTCACATGGCCCGAGTGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ESFLRFSLWRFT*LTWLTWPECSR Trigger: CCTGGAGCACTCGGGCCATGTGAGCCATGTGAGCCATGTGAACCTCCAGAGGCTGAATCTGAGGAAACTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CAA 90 bp | TCCAGAAGGTTTCAGGCTGCTCCTGGCGGTAATCATGAGGCTTTGTaGAGGCAGGAGGCGCTGCTCGTACCAGCTCCACTCTGTAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SRRFQAAPGGNHEAL*RQEALLVPAPLCSH Trigger: ATGACTACAGAGTGGAGCTGGTACGAGCAGCGCCTCCTGCCTCAACAAAGCCTCATGATTACCGCCAGGAGCAGCCTGAAACCTTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | AGCCTCTGGAGGTTCACATGGCTCACATGGCTCACATaGCCCGAGTGCTCCAGGTTCTGGAGGTTTATATGG | + |
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Preference number: 6 (lower is better) Translates to: SLWRFTWLTWLT*PECSRFWRFIW Trigger: CCATATAAACCTCCAGAACCTGGAGCACTCGGGCCATGTGAGCCATGTGAGCCATGTGAACCTCCAGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | CTCTTCCTCCCAGTTGTAGAGGAGGCACTGGCCACGTaGCCGTGCTTTACAGAGAGTTTCCTCAGATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LFLPVVEEALAT*PCFTESFLRFS Trigger: GCTGAATCTGAGGAAACTCTCTGTAAAGCACGGCCACGTGGCCAGTGCCTCCTCTACAACTGGGAGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | CCGTGCTTTACAGAGAGTTTCCTCAGATTCAGCCTCTaGAGGTTCACATGGCTCACATGGCTCACATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PCFTESFLRFSL*RFTWLTWLTWP Trigger: GGGCCATGTGAGCCATGTGAGCCATGTGAACCTCCAGAGGCTGAATCTGAGGAAACTCTCTGTAAAGCACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | CTTTACAGATCTGGTGTCGCAGGAGCATCTCCAGCATaGCTTCACGCTTCCCTCGAAGTGGCTGACAGATGT | + |
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Preference number: 6 (lower is better) Translates to: LYRSGVAGASPA*LHASLEVADRC Trigger: ACATCTGTCAGCCACTTCGAGGGAAGCGTGAAGCCATGCTGGAGATGCTCCTGCGACACCAGATCTGTAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CAA 90 bp | CAGACCCTGGTGTCCGTGTCGGAAGAAGTAACTCTCAGAGCCATCTaGCAATGGAGGGATTTGATCCAGCTGGTTGGTGGCTCTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QTLVSVSEEVTLRAI*QWRDLIQLVGGSLF Trigger: GAAGAGAGAGCCACCAACCAGCTGGATCAAATCCCTCCATTGCAAGATGGCTCTGAGAGTTACTTCTTCCGACACGGACACCAGGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS TCA 72 bp | TTCTGGAGGTTTATATGGCCCTCTCACTCCAGGTTCTaGGACTTGCAGAGGTTCCCAGGAGCGTTGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FWRFIWPSHSRF*DLQRFPGALWL Trigger: AAGCCACAACGCTCCTGGGAACCTCTGCAAGTCTCAGAACCTGGAGTGAGAGGGCCATATAAACCTCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CCA 72 bp | CATCTTGCAATGGAGGGATTTGATCCAGCTGGTTGGTaGCTCTCTCTTCCTCCCAGTTGTAGAGGAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: HLAMEGFDPAGW*LSLPPSCRGGT Trigger: AGTGCCTCCTCTACAACTGGGAGGAAGAGAGAGCCACCAACCAGCTGGATCAAATCCCTCCATTGCAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CAA 72 bp | GTGTCCGTGTCGGAAGAAGTAACTCTCAGAGCCATCTaGCAATGGAGGGATTTGATCCAGCTGGTTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VSVSEEVTLRAI*QWRDLIQLVGG Trigger: GCCACCAACCAGCTGGATCAAATCCCTCCATTGCAAGATGGCTCTGAGAGTTACTTCTTCCGACACGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS CAA 90 bp | CTCTGTAGTCATGGTGTGTTACCGACTCGGTCTCAAAGAGCTTCCTaGCAGGTTCCTGCTCTGCCTGCACCTCTTTACAGATCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LCSHGVLPTRSQRAS*QVPALPAPLYRSGV Trigger: GACACCAGATCTGTAAAGAGGTGCAGGCAGAGCAGGAACCTGCAAGGAAGCTCTTTGAGACCGAGTCGGTAACACACCATGACTACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 ENSMUST00000149575.8 |
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| CDS CAA 90 bp | GTGTCGGAAGAAGTAACTCTCAGAGCCATCTTGCAATGGAGGGATTaGATCCAGCTGGTTGGTGGCTCTCTCTTCCTCCCAGTTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: VSEEVTLRAILQWRD*IQLVGGSLFLPVVE Trigger: CTCTACAACTGGGAGGAAGAGAGAGCCACCAACCAGCTGGATCAAATCCCTCCATTGCAAGATGGCTCTGAGAGTTACTTCTTCCGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS GCA 72 bp | ATGGTGTGTTACCGACTCGGTCTCAAAGAGCTTCCTTaGAGGTTCCTGCTCTGCCTGCACCTCTTTACAGAT | + |
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Preference number: 6 (lower is better) Translates to: MVCYRLGLKELP*RFLLCLHLFTD Trigger: ATCTGTAAAGAGGTGCAGGCAGAGCAGGAACCTGCAAGGAAGCTCTTTGAGACCGAGTCGGTAACACACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 ENSMUST00000149575.8 |
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| CDS CCA 72 bp | CTGACACCATGCATTATAATCAGGGGCCAGGTCAACTaGGATGCATCTGTACCCTTGAGGAATGCAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LTPCIIIRGQVN*DASVPLRNAGA Trigger: AGCACCTGCATTCCTCAAGGGTACAGATGCATCCCAGTTGACCTGGCCCCTGATTATAATGCATGGTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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| CDS GCA 72 bp | ATAAGAAGAGGTAGGATCAGCCCTGGAGCTGAGGTCTaGCATATTACAGGGATCCTGAGGAATACAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: IRRGRISPGAEV*HITGILRNTRN Trigger: GTTTCTTGTATTCCTCAGGATCCCTGTAATATGGCAGACCTCAGCTCCAGGGCTGATCCTACCTCTTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084646.11 ENSMUST00000107870.3 |
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