Pregenerated sensors for SPAG6L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022783Ensembl transcript IDs: ENSMUST00000023468.6
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAGGCAGGTTGTCACCGTCTGTGCTTACTATGAGGAAATGGCCTaGGTGTTGCTGAACAGTGTCTCTCATCTAATTGAAGGCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: ERQVVTVCAYYEEMA*VLLNSVSHLIEGWV Trigger: AACCCAGCCTTCAATTAGATGAGAGACACTGTTCAGCAACACTCAGGCCATTTCCTCATAGTAAGCACAGACGGTGACAACCTGCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR GCA 90 bp | TTAGCTTCTGCATTAGCATCCAAACCTCTTATACAAGGGTTGCAATaGCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LASALASKPLIQGLQ*PVVRFIFQLFFQVL Trigger: AAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAATGCAGAAGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR CAA 90 bp | TTTCAGCTCTTCTTCCAGGTGCTTCTGTGTAACTTGAAAGGCAGGTaGTCACCGTCTGTGCTTACTATGAGGAAATGGCCTGAGTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: FQLFFQVLLCNLKGR*SPSVLTMRKWPECC Trigger: GCAACACTCAGGCCATTTCCTCATAGTAAGCACAGACGGTGACAACCTGCCTTTCAAGTTACACAGAAGCACCTGGAAGAAGAGCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCCATCTAATTGAAGGCTaGGTTAGTGCTGCTGGCATG | + |
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Preference number: 2 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFHLIEG*VSAAGM Trigger: CATGCCAGCAGCACTAACCCAGCCTTCAATTAGATG...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR CAA 90 bp | GTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGTAACTaGAAAGGCAGGTTGTCACCGTCTGTGCTTACTATGAGGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: VRFIFQLFFQVLLCN*KGRLSPSVLTMRKW Trigger: CCATTTCCTCATAGTAAGCACAGACGGTGACAACCTGCCTTTCAAGTTACACAGAAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTCGTCTGTGCTTACTATaGGGAAATGGCCTGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LASKPLIQGLQCPVVRFIRLCLL*GNGLSV Trigger: AACACTCAGGCCATTTCCTCATAGTAAGCACAGACG...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR-3UTR CCA 90 bp | TCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTTTATTCACACTCTCCTaGAAAACCGAGGAGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: SYTRVAMPCRQVHFSALLLFTLS*KTEENK Trigger: TTTATTCTCCTCGGTTTTCCAGGAGAGTGTGAATAA...AAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR TCA 72 bp | ACCCTTCAGGGAGAGGGAGAAGGGCTGCAAAACCAGTaGCAATGTATAGGACTGCCTACATTCTTAGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: TLQGEGEGLQNQ*QCIGLPTFLEN Trigger: GTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTTTGCAGCCCTTCTCCCTCTCCCTGAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR TCA 72 bp | GTTGTCACCGTCTGTGCTTACTATGAGGAAATGGCCTaGGTGTTGCTGAACAGTGTCTCTCATCTAATTGAA | + |
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Preference number: 3 (lower is better) Translates to: VVTVCAYYEEMA*VLLNSVSHLIE Trigger: TTCAATTAGATGAGAGACACTGTTCAGCAACACTCAGGCCATTTCCTCATAGTAAGCACAGACGGTGACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR GCA 72 bp | GCATTAGCATCCAAACCTCTTATACAAGGGTTGCAATaGCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: ALASKPLIQGLQ*PVVRFIFQLFF Trigger: GAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR CCA 72 bp | TCCACTCAAATGATATCAACATCGGAAAACATGACTTaGGCATTTGGTAATGTGAGCCTAAGCCAGGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: STQMISTSENMT*AFGNVSLSQEN Trigger: GTTCTCCTGGCTTAGGCTCACATTACCAAATGCCCAAGTCATGTTTTCCGATGTTGATATCATTTGAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | GCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGCTGGCAGCGTGTTTGTaGCAGCCACAGCCCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AMPCRQVHFSALLPGASVLAACL*QPQPWH Trigger: ATGCCAGGGCTGTGGCTGTCACAAACACGCTGCCAG...CACAGAAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | GCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGAGCCCTGGCATGCTCTaGAGTGTGTCTTCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: AMPCRQVHFSALLPGASVSPGML*SVSSQL Trigger: CAGCTGGGAAGACACACTCCAGAGCATGCCAGGGCT...CACAGAAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTGCCACAGCCCTGGCATaGTCTGGAGTGTGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFIATALA*SGVCLP Trigger: GGGAAGACACACTCCAGAGCATGCCAGGGCTGTGGC...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTCTCCGCAGTCAACTATaGCCTGGGCCAGCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFILRSQL*PGPAEE Trigger: CTCCTCAGCTGGCCCAGGCCATAGTTGACTGCGGAG...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTAGGCTGCAGCCTCCTTaGCCCCAGGGTCAAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFIRLQPP*PQGQNP Trigger: AGGATTTTGACCCTGGGGTCAAGGAGGCTGCAGCCT...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | GCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGAGCGTTTCGATGTTTTaGGGTCTTGTCGCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: AMPCRQVHFSALLPGASVSVSMF*GLVASS Trigger: AGAGCTGGCGACAAGACCCCAAAACATCGAAACGCT...CACAGAAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCATCATCTGGGCTAAGTaGGCAATAGCTCCTGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFIIWAK*AIAPAS Trigger: GGACGCAGGAGCTATTGCTCACTTAGCCCAGATGAT...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTGCAATGTATCCGAGTaGCCAGGCTGCAGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFICNVSE*PGCSLL Trigger: AAGGAGGCTGCAGCCTGGGCACTCGGATACATTGCA...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTGAACGGCTCAAGGGCTaGGAGGTAGGTGCATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFIERLKG*EVGAFL Trigger: CAGAAATGCACCTACCTCCCAGCCCTTGAGCCGTTC...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCGCATTAACAATCAGCTaGGAGAGCTCAGGCGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFALTIS*ESSGVC Trigger: ACACACGCCTGAGCTCTCGCAGCTGATTGTTAATGC...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGTGTGTCTTCCCAGCTaGCCCAAGGCCCAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTVCLPS*PKAQAA Trigger: TGCTGCCTGGGCCTTGGGGCAGCTGGGAAGACACAC...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCGTTTTGCATCAGGGTTaGGGATCATCTGGGCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFVLHQG*GSSGLS Trigger: ACTTAGCCCAGATGATCCTCAACCCTGATGCAAAAC...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | TTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCCTCAGAGCTCTCTGGTaGCATGTACAAAGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LYKGCNALSSGSFFSSSSLRALW*HVQRQQ Trigger: CTGCTGTCTTTGTACATGTCACCAGAGAGCTCTGAG...GGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | TCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTTCTTGTCGCCAGCTCTaGCACCATCTGCACGAATTG | + |
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Preference number: 4 (lower is better) Translates to: SYTRVAMPCRQVHFSALLSCRQL*HHLHEL Trigger: CAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGA...AAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | GCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGATTACACCTGCATTCTaGAGCGTTTCGATGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: AMPCRQVHFSALLPGASVITPAF*SVSMFW Trigger: CCAAAACATCGAAACGCTGCAGAATGCAGGTGTAAT...CACAGAAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCGAGAGAGCCTGGTTCTaGCTTTATCTCCTGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFERAWF*LYLLNL Trigger: AAGGTTCAGGAGATAAAGGCAGAACCAGGCTCTCTC...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCCTGTTGATGTATTCCTaGAGGAGAGAGCCTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFLLMYS*RREPGS Trigger: AGAACCAGGCTCTCTCCTGCAGGAATACATCAACAG...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTAGGCAGATTGACAACTaGGGTACACCCTTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFIRQIDN*GTPLEM Trigger: CATCTCCAAGGGTGTACCCCAGTTGTCAATCTGCCT...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTGGCTTTGCTGTCATGTaGCAGCACCTTACTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFIGFAVM*QHLTEL Trigger: CAGTTCAGTAAGGTGCTGCCACATGACAGCAAAGCC...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR CAA 72 bp | TTCTTCCAGGTGCTTCTGTGTAACTTGAAAGGCAGGTaGTCACCGTCTGTGCTTACTATGAGGAAATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FFQVLLCNLKGR*SPSVLTMRKWP Trigger: AGGCCATTTCCTCATAGTAAGCACAGACGGTGACAACCTGCCTTTCAAGTTACACAGAAGCACCTGGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTAAAGCTGCAGTCTGTTaGATTGTTGGGACCACATCC | + |
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Preference number: 4 (lower is better) Translates to: LASKPLIQGLQCPVVRFIKAAVC*IVGTTS Trigger: GGATGTGGTCCCAACAATTCAACAGACTGCAGCTTT...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGATGGCCTGGGCCAGCTaGGGAGAGTGTTTCCCAACT | + |
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Preference number: 4 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRMAWAS*GECFPT Trigger: AGTTGGGAAACACTCTCCTCAGCTGGCCCAGGCCAT...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCGCAGCAGCCTTAATATaGTCTTCTGGTTCTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFAAALI*SSGSSD Trigger: GTCAGAAGAACCAGAAGATCATATTAAGGCTGCTGC...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | TTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGTCATCATTGTAATTaGCCAGTCTCCCCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LYKGCNALSSGSFFSSSSSHHCN*PVSPEP Trigger: TGGCTCTGGGGAGACTGGCCAATTACAATGATGACT...GGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR CAA 72 bp | GCTTCTGCATTAGCATCCAAACCTCTTATACAAGGGTaGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASALASKPLIQG*QCPVVRFIFQL Trigger: GAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAATGCAGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAAATCTGACTGAGAGCTaGGAGGACCTGGCGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTNLTES*EDLALQ Trigger: CTGAAGCGCCAGGTCCTCTCAGCTCTCAGTCAGATT...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCTTTGCAATCTGACTaGGAGCTGAGAGGACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTALQSD*ELRGPG Trigger: GCCAGGTCCTCTCAGCTCTCAGTCAGATTGCAAAGC...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | GCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGGTTTTGCAATCTCTCTaGTTAAGGTGCAAGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: AMPCRQVHFSALLPGASVVLQSL*LRCKHF Trigger: AAAATGCTTGCACCTTAATCAGAGAGATTGCAAAAC...CACAGAAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGCGTAACCCAGCATCATaGTGCCAGGCAGCCGTATGT | + |
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Preference number: 4 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRRNPAS*CQAAVC Trigger: ACATACGGCTGCCTGGCATCATGATGCTGGGTTACG...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | TATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCTATCTTAGCTTCCTTTGCAGGACCCAATaGAATCGATCACGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: YRTAYILRKPNLTAYLSFLCRTQ*NRSRQP Trigger: TGGCTGCCGTGATCGATTGCATTGGGTCCTGCAAAG...GAAGCTAAGATAGGCTGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGTGCGTCCGGGCTTTCTaGTACTGCTCGAACACTTGC | + |
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Preference number: 4 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRCVRAF*YCSNTC Trigger: GCAAGTGTTCGAGCAGTACCAGAAAGCCCGGACGCA...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| 3UTR CAA 72 bp | ATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGTAACTaGAAAGGCAGGTTGTCACCGTCTGTGCTTACTATG | + |
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Preference number: 4 (lower is better) Translates to: IFQLFFQVLLCN*KGRLSPSVLTM Trigger: CATAGTAAGCACAGACGGTGACAACCTGCCTTTCAAGTTACACAGAAGCACCTGGAAGAAGAGCTGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAACCATCTGCACGAATTaGGTCCGGGCTTTCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTTICTN*VRAFWY Trigger: GTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGT...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | TATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCTATCTTAGCTTCCCCCAGAGCCAAAGCTaGAGTCTGTTGAATTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YRTAYILRKPNLTAYLSFPQSQS*SLLNCW Trigger: CCAACAATTCAACAGACTGCAGCTTTGGCTCTGGGG...GAAGCTAAGATAGGCTGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR GCA 90 bp | TTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAACAGGGAAAATCTCTaGTTCAACAACCATCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LYKGCNALSSGSFFSSSSNRENL*FNNHLC Trigger: GCAGAGATGGTTGTTGAAGCAGAGATTTTCCCTGTT...GGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR CCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACACTGCAGGAGAGAGCCTaGTTCTGCCTTTATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTLQERA*FCLYLL Trigger: CAGGAGATAAAGGCAGAACCAGGCTCTCTCCTGCAG...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS-3UTR TCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGAATGCTTTGCAATCTaGCTGAGAGCTGAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTECFAI*LRAERT Trigger: GGTCCTCTCAGCTCTCAGTCAGATTGCAAAGCATTC...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCGTATGTTCCCTTTaGAGGACCCAATGCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTAVCSL*RTQCNR Trigger: TCGATTGCATTGGGTCCTGCAAAGGGAACATACGGC...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CCA 90 bp | TCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTAGTCTGTTGAATTGTTaGGACCACATCCAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYTRVAMPCRQVHFSALLSLLNC*DHIQKK Trigger: CTTCTTCTGGATGTGGTCCCAACAATTCAACAGACT...AAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCTAACTCTGGGGAGTaGTTTGAGATATCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTANSGE*FEISLR Trigger: CCTCAGTGATATCTCAAAGCACTCCCCAGAGTTAGC...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR GCA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGGGGCTGGGAGGTAGGTaGATTTCTGAAGGATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRGLGGR*ISEGYS Trigger: AGAATATCCTTCAGAAATGCACCTACCTCCCAGCCC...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR GCA 90 bp | TATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCTATCTTAGCTTCAGCACCTTACTGAACTaGCCAACAACATGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YRTAYILRKPNLTAYLSFSTLLN*PTTCFR Trigger: CCTGAAACATGTTGTTGGGCAGTTCAGTAAGGTGCT...GAAGCTAAGATAGGCTGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACATTCTGTGTTGTGTCTTaGAATGTATCCGAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTFCVVS*NVSECP Trigger: TGGGCACTCGGATACATTGCAAGACACAACACAGAA...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CCA 90 bp | TCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCTTACTATTTCCTCTaGGTAACAATTGTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYTRVAMPCRQVHFSALLPYYFL*VTIVDA Trigger: AGCATCAACAATTGTTACCCAGAGGAAATAGTAAGG...AAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR TCA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGTCTGCCTTTATCTCCTaGACCTTTTTAAGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRSAFIS*TFLSPP Trigger: TGGTGGACTTAAAAAGGTTCAGGAGATAAAGGCAGA...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR GCA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGTTCAACAACCATCTCTaGCAAGTCCACAGAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRFNNHL*QVHRML Trigger: AAGCATTCTGTGGACTTGGCAGAGATGGTTGTTGAA...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CCA 90 bp | TATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCTATCTTAGCTTCTTTCAAAGCAATTTCTaGCTCCTGGATACAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YRTAYILRKPNLTAYLSFFQSNF*LLDTKD Trigger: GTCCTTTGTATCCAGGAGCCAGAAATTGCTTTGAAA...GAAGCTAAGATAGGCTGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CCA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGGCAATTTCTGGCTCCTaGATACAAAGGACTAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRAISGS*IQRTKR Trigger: TCTTTTAGTCCTTTGTATCCAGGAGCCAGAAATTGC...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAATTTTGTTCTGCCAATaGATAAACAAGCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTILFCQ*INKLWK Trigger: CTTCCACAGCTTGTTTATTCATTGGCAGAACAAAAT...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAATCGGAGTATCCAGGTaGATAATACCTTACTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPVTMYRTAYILRKPNLTIGVSR*IIPYYF Trigger: GAAATAGTAAGGTATTATTCACCTGGATACTCCGAT...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 90 bp | ATGTTTTGGGGTCTTGTCGCCAGCTCTGCCACCATCTGCACGAATTaGGTCCGGGCTTTCTGGTACTGCTCGAACACTTGCAGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MFWGLVASSATICTN*VRAFWYCSNTCSTC Trigger: GCAGGTGCTGCAAGTGTTCGAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 90 bp | AGCGTTTCGATGTTTTGGGGTCTTGTCGCCAGCTCTGCCACCATCTaGACGAATTGCGTCCGGGCTTTCTGGTACTGCTCGAACACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSMFWGLVASSATI*TNCVRAFWYCSNTC Trigger: GCAAGTGTTCGAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 90 bp | TGCATTCTGCAGCGTTTCGATGTTTTGGGGTCTTGTCGCCAGCTCTaGCACCATCTGCACGAATTGCGTCCGGGCTTTCTGGTACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CILQRFDVLGSCRQL*HHLHELRPGFLVLL Trigger: GAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCTGCAGAATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS TCA 90 bp | TGGCGCTTCAGTTTTGCATCAGGGTTGAGGATCATCTGGGCTAAGTaGGCAATAGCTCCTGCGTCCACCACCGTCTGTGCTAACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRFSFASGLRIIWAK*AIAPASTTVCANSG Trigger: CCCAGAGTTAGCACAGACGGTGGTGGACGCAGGAGCTATTGCTCACTTAGCCCAGATGATCCTCAACCCTGATGCAAAACTGAAGCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS TCA 90 bp | CCATGGCCAGGTTCTCAGAATGAGCAGCCACGTAACCCAGCATCATaGTGCCAGGCAGCCGTATGTTCCCTTTGCAGGACCCAATGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PWPGSQNEQPRNPAS*CQAAVCSLCRTQCN Trigger: ATTGCATTGGGTCCTGCAAAGGGAACATACGGCTGCCTGGCATCATGATGCTGGGTTACGTGGCTGCTCATTCTGAGAACCTGGCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 90 bp | GCAATAGCTCCTGCGTCCACCACCGTCTGTGCTAACTCTGGGGAGTaGTTTGAGATATCACTGAGGGCCGAGGCAGCGATCCTTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AIAPASTTVCANSGE*FEISLRAEAAILFK Trigger: TTTGAAAAGGATCGCTGCCTCGGCCCTCAGTGATATCTCAAAGCACTCCCCAGAGTTAGCACAGACGGTGGTGGACGCAGGAGCTATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 90 bp | CCCTTTGCAGGACCCAATGCAATCGATCACGGCAGCCACGCCTCCTaGATTAACAATCAGCTGCGAGAGCTCAGGCGTGTGTTTTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PFAGPNAIDHGSHAS*INNQLRELRRVFCN Trigger: ATTGCAAAACACACGCCTGAGCTCTCGCAGCTGATTGTTAATGCAGGAGGCGTGGCTGCCGTGATCGATTGCATTGGGTCCTGCAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | GCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCAGGTGCTTCTGTGCAGCGTTTCGATGTTTaGGGGTCTTGTCGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AMPCRQVHFSALLPGASVQRFDV*GSCRQL Trigger: GAGCTGGCGACAAGACCCCAAAACATCGAAACGCTG...CACAGAAGCACCTGGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS CCA 90 bp | CTTAGCAAAGACATTACACCTGCATTCTGCAGCGTTTCGATGTTTTaGGGTCTTGTCGCCAGCTCTGCCACCATCTGCACGAATTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSKDITPAFCSVSMF*GLVASSATICTNCV Trigger: GACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCTGCAGAATGCAGGTGTAATGTCTTTGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTCAGGCTGCAGCCTCCTaGACCCCAGGGTCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LASKPLIQGLQCPVVRFIQAAAS*TPGSKS Trigger: GGATTTTGACCCTGGGGTCAAGGAGGCTGCAGCCTG...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS TCA 90 bp | TTGATGTATTCCTGCAGGAGAGAGCCTGGTTCTGCCTTTATCTCCTaGACCTTTTTAAGTCCACCACTAGTCACGAAAAGCCGCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LMYSCRREPGSAFIS*TFLSPPLVTKSRRA Trigger: AGCCCGGCGGCTTTTCGTGACTAGTGGTGGACTTAAAAAGGTTCAGGAGATAAAGGCAGAACCAGGCTCTCTCCTGCAGGAATACATCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 90 bp | GCAGTCAACTATGGCCTGGGCCAGCTGAGGAGAGTGTTTCCCAACTaGTCTCAACACAAAGGCAGCTGCCTTCTTGTAAAAACGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVNYGLGQLRRVFPN*SQHKGSCLLVKTIL Trigger: CAAAATCGTTTTTACAAGAAGGCAGCTGCCTTTGTGTTGAGAGCAGTTGGGAAACACTCTCCTCAGCTGGCCCAGGCCATAGTTGACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS CCA 90 bp | AAGTCCACCACTAGTCACGAAAAGCCGCCGGGCTTTGCTGTCATGTaGCAGCACCTTACTGAACTGCCCAACAACATGTTTCAGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: KSTTSHEKPPGFAVM*QHLTELPNNMFQDI Trigger: AATATCCTGAAACATGTTGTTGGGCAGTTCAGTAAGGTGCTGCCACATGACAGCAAAGCCCGGCGGCTTTTCGTGACTAGTGGTGGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCCACCATCTGCACGAATaGCGTCCGGGCTTTCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFHHLHE*RPGFLV Trigger: TACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTG...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTCGATGTTTTGGGGTCTaGTCGCCAGCTCTGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LASKPLIQGLQCPVVRFIRCFGV*SPALPP Trigger: TGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCG...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS CCA 90 bp | GAATGTCACCTTTCACGACTGCTTCTGCTAAGTCATCATTGTAATTaGCCAGTCTCCCCAGAGCCAAAGCTGCAGTCTGTTGAATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ECHLSRLLLLSHHCN*PVSPEPKLQSVELL Trigger: CAACAATTCAACAGACTGCAGCTTTGGCTCTGGGGAGACTGGCCAATTACAATGATGACTTAGCAGAAGCAGTCGTGAAAGGTGACATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGGTACTGCTCGAACACTaGCAGCACCTGCCGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRVLLEH*QHLPLA Trigger: AGCCAGCGGCAGGTGCTGCAAGTGTTCGAGCAGTAC...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCCAAAGCTGCAGTCTGTaGAATTGTTGGGACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFQSCSL*NCWDHI Trigger: GATGTGGTCCCAACAATTCAACAGACTGCAGCTTTG...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | TTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCTTCCACATGTTTCAGGATATaGGGAGGTGCGTCGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYKGCNALSSGSFFSSSSTCFRI*GGASYR Trigger: CCTGTACGACGCACCTCCCAATATCCTGAAACATGT...GGAAGAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS TCA 90 bp | ATACAAAGGACTAAAAGAGGAATTGCTCCTGCATCCACCACGGCTTaGGATAATTCTGTGTTGTGTCTTGCAATGTATCCGAGTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQRTKRGIAPASTTA*DNSVLCLAMYPSAQ Trigger: CTGGGCACTCGGATACATTGCAAGACACAACACAGAATTATCTCAAGCCGTGGTGGATGCAGGAGCAATTCCTCTTTTAGTCCTTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | TTAGCATCCAAACCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTAGTTTTGCATCAGGGTaGAGGATCATCTGGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LASKPLIQGLQCPVVRFISFASG*RIIWAK Trigger: CTTAGCCCAGATGATCCTCAACCCTGATGCAAAACT...AATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 90 bp | ATTGTTGATGCTGTTGATGTATTCCTGCAGGAGAGAGCCTGGTTCTaGCTTTATCTCCTGAACCTTTTTAAGTCCACCACTAGTCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: IVDAVDVFLQERAWF*LYLLNLFKSTTSHE Trigger: TTCGTGACTAGTGGTGGACTTAAAAAGGTTCAGGAGATAAAGGCAGAACCAGGCTCTCTCCTGCAGGAATACATCAACAGCATCAACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | TATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCTATCTTAGCTTCCTTCTGACAGGCAGATaGACAACTGGGGTACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: YRTAYILRKPNLTAYLSFLLTGR*TTGVHP Trigger: AGGGTGTACCCCAGTTGTCAATCTGCCTGTCAGAAG...GAAGCTAAGATAGGCTGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTTATACAAGGGTTGCAATGCCCTGTCGTCAGGTTCATTTTTCAGCTCTTCCAATTGTTGATGCTGTaGATGTATTCCTGCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLIQGLQCPVVRFIFQLFQLLML*MYSCRR Trigger: TCTCCTGCAGGAATACATCAACAGCATCAACAATTG...GAAGAGCTGAAAAATGAACCTGACGACAGGGCATTGCAACCCTTGTATAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS CCA 90 bp | GTAACAATTGTTGATGCTGTTGATGTATTCCTGCAGGAGAGAGCCTaGTTCTGCCTTTATCTCCTGAACCTTTTTAAGTCCACCACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTIVDAVDVFLQERA*FCLYLLNLFKSTTS Trigger: ACTAGTGGTGGACTTAAAAAGGTTCAGGAGATAAAGGCAGAACCAGGCTCTCTCCTGCAGGAATACATCAACAGCATCAACAATTGTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | AAACCAGTGACAATGTATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAAGCCGTATGTTCCCTTaGCAGGACCCAATGCAATCG | + |
|
Preference number: 5 (lower is better) Translates to: KPVTMYRTAYILRKPNLTSRMFP*QDPMQS Trigger: CGATTGCATTGGGTCCTGCAAAGGGAACATACGGCT...TGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATACATTGTCACTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | TATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCTATCTTAGCTTCCAGTCTGTTGAATTGTaGGGACCACATCCAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YRTAYILRKPNLTAYLSFQSVEL*GPHPEE Trigger: TTCTTCTGGATGTGGTCCCAACAATTCAACAGACTG...GAAGCTAAGATAGGCTGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | GTACTTTCAGATAATGTTAACAATCATTATTCACACTCTCCTGGAAAACCGAGGCTGCAGTCTGTTGAATaGTTGGGACCACATCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLSDNVNNHYSHSPGKPRLQSVE*LGPHPE Trigger: TTCTGGATGTGGTCCCAACAATTCAACAGACTGCAG...CCTCGGTTTTCCAGGAGAGTGTGAATAATGATTGTTAACATTATCTGAAAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS-3UTR CAA 90 bp | TATAGGACTGCCTACATTCTTAGAAAACCAAACCTAACAGCCTATCTTAGCTTCTTCACATATTCATCTTaGTCCTTCAGGCAGGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: YRTAYILRKPNLTAYLSFFTYSS*SFRQVS Trigger: ACTAACCTGCCTGAAGGACAAAGATGAATATGTGAA...GAAGCTAAGATAGGCTGTTAGGTTTGGTTTTCTAAGAATGTAGGCAGTCCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 72 bp | CCTGCGTCCACCACCGTCTGTGCTAACTCTGGGGAGTaGTTTGAGATATCACTGAGGGCCGAGGCAGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: PASTTVCANSGE*FEISLRAEAAI Trigger: GATCGCTGCCTCGGCCCTCAGTGATATCTCAAAGCACTCCCCAGAGTTAGCACAGACGGTGGTGGACGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS CCA 72 bp | TCTGCCACCATCTGCACGAATTGCGTCCGGGCTTTCTaGTACTGCTCGAACACTTGCAGCACCTGCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SATICTNCVRAF*YCSNTCSTCRW Trigger: CCAGCGGCAGGTGCTGCAAGTGTTCGAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 72 bp | GGTCTTGTCGCCAGCTCTGCCACCATCTGCACGAATTaGGTCCGGGCTTTCTGGTACTGCTCGAACACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLVASSATICTN*VRAFWYCSNTC Trigger: GCAAGTGTTCGAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
||
| CDS GCA 72 bp | GGACCCAATGCAATCGATCACGGCAGCCACGCCTCCTaGATTAACAATCAGCTGCGAGAGCTCAGGCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPNAIDHGSHAS*INNQLRELRRV Trigger: CACACGCCTGAGCTCTCGCAGCTGATTGTTAATGCAGGAGGCGTGGCTGCCGTGATCGATTGCATTGGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | GGGTCTTGTCGCCAGCTCTGCCACCATCTGCACGAATaGCGTCCGGGCTTTCTGGTACTGCTCGAACACTTG | + |
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Preference number: 6 (lower is better) Translates to: GSCRQLCHHLHE*RPGFLVLLEHL Trigger: CAAGTGTTCGAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | CCCAGCATCATGATGCCAGGCAGCCGTATGTTCCCTTaGCAGGACCCAATGCAATCGATCACGGCAGCCACG | + |
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Preference number: 6 (lower is better) Translates to: PSIMMPGSRMFP*QDPMQSITAAT Trigger: CGTGGCTGCCGTGATCGATTGCATTGGGTCCTGCAAAGGGAACATACGGCTGCCTGGCATCATGATGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 90 bp | GATGTTTTGGGGTCTTGTCGCCAGCTCTGCCACCATCTGCACGAATaGCGTCCGGGCTTTCTGGTACTGCTCGAACACTTGCAGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: DVLGSCRQLCHHLHE*RPGFLVLLEHLQHL Trigger: CAGGTGCTGCAAGTGTTCGAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS GCA 72 bp | ATGTTTTGGGGTCTTGTCGCCAGCTCTGCCACCATCTaGACGAATTGCGTCCGGGCTTTCTGGTACTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: MFWGLVASSATI*TNCVRAFWYCS Trigger: CGAGCAGTACCAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS GCA 72 bp | CAGCGTTTCGATGTTTTGGGGTCTTGTCGCCAGCTCTaGCACCATCTGCACGAATTGCGTCCGGGCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QRFDVLGSCRQL*HHLHELRPGFL Trigger: CAGAAAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS TCA 72 bp | TCCAGAGCTCCGCAGTCAACTATGGCCTGGGCCAGCTaGGGAGAGTGTTTCCCAACTGCTCTCAACACAAAG | + |
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Preference number: 6 (lower is better) Translates to: SRAPQSTMAWAS*GECFPTALNTK Trigger: CTTTGTGTTGAGAGCAGTTGGGAAACACTCTCCTCAGCTGGCCCAGGCCATAGTTGACTGCGGAGCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS TCA 72 bp | GGTTCTCAGAATGAGCAGCCACGTAACCCAGCATCATaGTGCCAGGCAGCCGTATGTTCCCTTTGCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: GSQNEQPRNPAS*CQAAVCSLCRT Trigger: GGTCCTGCAAAGGGAACATACGGCTGCCTGGCATCATGATGCTGGGTTACGTGGCTGCTCATTCTGAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | CACCTGCATTCTGCAGCGTTTCGATGTTTTGGGGTCTaGTCGCCAGCTCTGCCACCATCTGCACGAATTGCG | + |
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Preference number: 6 (lower is better) Translates to: HLHSAAFRCFGV*SPALPPSARIA Trigger: CGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCTGCAGAATGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 90 bp | GTGTTGTGTCTTGCAATGTATCCGAGTGCCCAGGCTGCAGCCTCCTaGACCCCAGGGTCAAAATCCTCCAAGCAGATCACCAGTGTATCC | + |
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Preference number: 6 (lower is better) Translates to: VLCLAMYPSAQAAAS*TPGSKSSKQITSVS Trigger: GGATACACTGGTGATCTGCTTGGAGGATTTTGACCCTGGGGTCAAGGAGGCTGCAGCCTGGGCACTCGGATACATTGCAAGACACAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CCA 72 bp | GACATTACACCTGCATTCTGCAGCGTTTCGATGTTTTaGGGTCTTGTCGCCAGCTCTGCCACCATCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: DITPAFCSVSMF*GLVASSATICT Trigger: CGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCTGCAGAATGCAGGTGTAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | CCAGTCTCCCCAGAGCCAAAGCTGCAGTCTGTTGAATaGTTGGGACCACATCCAGAAGAAGCGGCCTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: PVSPEPKLQSVE*LGPHPEEAALA Trigger: TGCTAAGGCCGCTTCTTCTGGATGTGGTCCCAACAATTCAACAGACTGCAGCTTTGGCTCTGGGGAGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | TTAAGTCCACCACTAGTCACGAAAAGCCGCCGGGCTTaGCTGTCATGTGGCAGCACCTTACTGAACTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSPPLVTKSRRA*LSCGSTLLNCP Trigger: TGGGCAGTTCAGTAAGGTGCTGCCACATGACAGCAAAGCCCGGCGGCTTTTCGTGACTAGTGGTGGACTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 90 bp | AAGACATTACACCTGCATTCTGCAGCGTTTCGATGTTTTGGGGTCTaGTCGCCAGCTCTGCCACCATCTGCACGAATTGCGTCCGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: KTLHLHSAAFRCFGV*SPALPPSARIASGL Trigger: AAGCCCGGACGCAATTCGTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCTGCAGAATGCAGGTGTAATGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS TCA 72 bp | AGTTTTGCATCAGGGTTGAGGATCATCTGGGCTAAGTaGGCAATAGCTCCTGCGTCCACCACCGTCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SFASGLRIIWAK*AIAPASTTVCA Trigger: AGCACAGACGGTGGTGGACGCAGGAGCTATTGCTCACTTAGCCCAGATGATCCTCAACCCTGATGCAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | AGACATTACACCTGCATTCTGCAGCGTTTCGATGTTTaGGGGTCTTGTCGCCAGCTCTGCCACCATCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RHYTCILQRFDV*GSCRQLCHHLH Trigger: GTGCAGATGGTGGCAGAGCTGGCGACAAGACCCCAAAACATCGAAACGCTGCAGAATGCAGGTGTAATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | GTCTCCCCAGAGCCAAAGCTGCAGTCTGTTGAATTGTaGGGACCACATCCAGAAGAAGCGGCCTTAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSPEPKLQSVEL*GPHPEEAALAK Trigger: CTTTGCTAAGGCCGCTTCTTCTGGATGTGGTCCCAACAATTCAACAGACTGCAGCTTTGGCTCTGGGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | CATCCACCACGGCTTGAGATAATTCTGTGTTGTGTCTaGCAATGTATCCGAGTGCCCAGGCTGCAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: HPPRLEIILCCV*QCIRVPRLQPP Trigger: AGGAGGCTGCAGCCTGGGCACTCGGATACATTGCAAGACACAACACAGAATTATCTCAAGCCGTGGTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CCA 72 bp | ACTAGTCACGAAAAGCCGCCGGGCTTTGCTGTCATGTaGCAGCACCTTACTGAACTGCCCAACAACATGTTT | + |
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Preference number: 6 (lower is better) Translates to: TSHEKPPGFAVM*QHLTELPNNMF Trigger: AAACATGTTGTTGGGCAGTTCAGTAAGGTGCTGCCACATGACAGCAAAGCCCGGCGGCTTTTCGTGACTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 72 bp | ACCTTACTGAACTGCCCAACAACATGTTTCAGGATATaGGGAGGTGCGTCGTACAGGAACGGCTCAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TLLNCPTTCFRI*GGASYRNGSRA Trigger: AGCCCTTGAGCCGTTCCTGTACGACGCACCTCCCAATATCCTGAAACATGTTGTTGGGCAGTTCAGTAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 90 bp | AATTGGCCAGTCTCCCCAGAGCCAAAGCTGCAGTCTGTTGAATTGTaGGGACCACATCCAGAAGAAGCGGCCTTAGCAAAGACATTACAC | + |
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Preference number: 6 (lower is better) Translates to: NWPVSPEPKLQSVEL*GPHPEEAALAKTLH Trigger: GTGTAATGTCTTTGCTAAGGCCGCTTCTTCTGGATGTGGTCCCAACAATTCAACAGACTGCAGCTTTGGCTCTGGGGAGACTGGCCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS TCA 72 bp | TCTCTGCCAAGTCCACAGAATGCTTTGCAATCTGACTaGGAGCTGAGAGGACCTGGCGCTTCAGTTTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SLPSPQNALQSD*ELRGPGASVLH Trigger: ATGCAAAACTGAAGCGCCAGGTCCTCTCAGCTCTCAGTCAGATTGCAAAGCATTCTGTGGACTTGGCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS TCA 72 bp | ACCATCTCTGCCAAGTCCACAGAATGCTTTGCAATCTaGCTGAGAGCTGAGAGGACCTGGCGCTTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: TISAKSTECFAI*LRAERTWRFSF Trigger: AAAACTGAAGCGCCAGGTCCTCTCAGCTCTCAGTCAGATTGCAAAGCATTCTGTGGACTTGGCAGAGATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 90 bp | TGTAATTGGCCAGTCTCCCCAGAGCCAAAGCTGCAGTCTGTTGAATaGTTGGGACCACATCCAGAAGAAGCGGCCTTAGCAAAGACATTA | + |
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Preference number: 6 (lower is better) Translates to: CNWPVSPEPKLQSVE*LGPHPEEAALAKTL Trigger: TAATGTCTTTGCTAAGGCCGCTTCTTCTGGATGTGGTCCCAACAATTCAACAGACTGCAGCTTTGGCTCTGGGGAGACTGGCCAATTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS GCA 72 bp | ATCATTGTAATTGGCCAGTCTCCCCAGAGCCAAAGCTaGAGTCTGTTGAATTGTTGGGACCACATCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: IIVIGQSPQSQS*SLLNCWDHIQK Trigger: CTTCTGGATGTGGTCCCAACAATTCAACAGACTGCAGCTTTGGCTCTGGGGAGACTGGCCAATTACAATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS TCA 72 bp | GCTGCGAGAGCTCAGGCGTGTGTTTTGCAATCTCTCTaGTTAAGGTGCAAGCATTTTTCTTCACATATTCAT | + |
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Preference number: 6 (lower is better) Translates to: AARAQACVLQSL*LRCKHFSSHIH Trigger: ATGAATATGTGAAGAAAAATGCTTGCACCTTAATCAGAGAGATTGCAAAACACACGCCTGAGCTCTCGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS CAA 90 bp | ATCTCTCTGATTAAGGTGCAAGCATTTTTCTTCACATATTCATCTTaGTCCTTCAGGCAGGTTAGTACAACAGGGAAAATCTCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ISLIKVQAFFFTYSS*SFRQVSTTGKISAS Trigger: TGAAGCAGAGATTTTCCCTGTTGTACTAACCTGCCTGAAGGACAAAGATGAATATGTGAAGAAAAATGCTTGCACCTTAATCAGAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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| CDS TCA 72 bp | AGCTGCCTTCTTGTAAAAACGATTTTGTTCTGCCAATaGATAAACAAGCTGTGGAAGAATGTCACCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SCLLVKTILFCQ*INKLWKNVTFH Trigger: GTGAAAGGTGACATTCTTCCACAGCTTGTTTATTCATTGGCAGAACAAAATCGTTTTTACAAGAAGGCAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023468.6 |
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