Pregenerated sensors for SPAG6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037708Ensembl transcript IDs: ENSMUST00000095132.10, ENSMUST00000173763.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATTGTCAGGGTGCATGGAAGTCGAGAAACAACTTCATGCAGGGTaGGAAGAAAGCAGTTCCAGAGCCAGGACTAAAGAGGAGGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GLSGCMEVEKQLHAG*EESSSRARTKEEGF Trigger: AAAGCCCTCCTCTTTAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGCACCCTGACAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR-3UTR TCA 90 bp | TCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGACTACAGGGAAAAGGCAGGTaGGTGATCTGCAGATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SRNNFMQGEKKAVPEPGLQGKGR*VICRSL Trigger: AAGAGATCTGCAGATCACTCACCTGCCTTTTCCCTG...TAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR-3UTR TCA 90 bp | TCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGACTATTTTCTGTCTTTCTGTaGAACTGGCAAGGTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SRNNFMQGEKKAVPEPGLFSVFL*NWQGQV Trigger: AACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAA...TAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR-3UTR TCA 90 bp | AATGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCCAACTTCATGCAGGGTaGGAAGAAAGCAGTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: NVLNLRLLLAFSNYTLLSQLHAG*EESSSR Trigger: TCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTG...GGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAAATGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTGTAAATTCTGAAAGTTaGGAAAGTGAACCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VKCVKSEAAASILKLYLIVNSES*ESEPGK Trigger: TTTCCCAGGTTCACTTTCCCAACTTTCAGAATTTAC...AATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACATTTCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR TCA 72 bp | AGGAGGGCTTTCCCAGATTCTCAGGGAAAAGGCAGGTaGGTGATCTGCAGATCTCTTGAGCTGATTCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: RRAFPDSQGKGR*VICRSLELIQC Trigger: GCACTGAATCAGCTCAAGAGATCTGCAGATCACTCACCTGCCTTTTCCCTGAGAATCTGGGAAAGCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR TCA 72 bp | TCAGGGAAAAGGCAGGTGAGTGATCTGCAGATCTCTTaGGCTGATTCAGTGCTCTTAAGTGGCCACGCACAA | + |
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Preference number: 3 (lower is better) Translates to: SGKRQVSDLQIS*ADSVLLSGHAQ Trigger: TTGTGCGTGGCCACTTAAGAGCACTGAATCAGCTCAAGAGATCTGCAGATCACTCACCTGCCTTTTCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR GCA 72 bp | ATTGTCAGGGTGCATGGAAGTCGAGAAACAACTTCATaGAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: IVRVHGSRETTS*RVRRKQFQSQD Trigger: GTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGCACCCTGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCCTTCTGTATCTGCAACCTaGAACAGGAATCAAGACACC | + |
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Preference number: 3 (lower is better) Translates to: CVKSEAAASILKLYLIIPSVSAT*NRNQDT Trigger: GGTGTCTTGATTCCTGTTCAAGGTTGCAGATACAGA...AGGGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| 3UTR GCA 72 bp | CAAACAGCATGTCTCATTTACATCCAGTCCCAAGGATaGGTGTGTTGTGTTGTGTTTTATGTGTTTTATAGA | + |
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Preference number: 3 (lower is better) Translates to: QTACLIYIQSQG*VCCVVFYVFYR Trigger: TCTATAAAACACATAAAACACAACACAACACACGCATCCTTGGGACTGGATGTAAATGAGACATGCTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | TCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGACTATGCTCCGCCACCATCTaGACAAACCGGGTCCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SRNNFMQGEKKAVPEPGLCSATI*TNRVRA Trigger: CGCCCGGACCCGGTTTGTGCAGATGGTGGCGGAGCA...TAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | AGGACTAAAGAGGAGGGCTTTCCCAGATTCTCAGGGAAAAGGCAGGTGAGTGATGTGGCCTGCGCCAGCTaGGGAGAGTGTTTACCAACC | + |
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Preference number: 4 (lower is better) Translates to: RTKEEGFPRFSGKRQVSDVACAS*GECLPT Trigger: GGTTGGTAAACACTCTCCTCAGCTGGCGCAGGCCAC...ATCACTCACCTGCCTTTTCCCTGAGAATCTGGGAAAGCCCTCCTCTTTAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | GGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGCACCACAGTCAACTGTaGCCTGCGCCAGCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GSRETTSCRVRRKQFQSQHHSQL*PAPAEE Trigger: CTCCTCAGCTGGCGCAGGCCACAGTTGACTGTGGTG...CTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | TTCTTAGGGCCTGGCACCCCCATACCCACTCCATCCCCAGTCATCATTTCTCTCGCATCCACCACAGCTTaGGACAGTTCTGCATTATGC | + |
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Preference number: 4 (lower is better) Translates to: FLGPGTPIPTPSPVIISLASTTA*DSSALC Trigger: GCATAATGCAGAACTGTCGCAAGCTGTGGTGGATGC...GAGAGAAATGATGACTGGGGATGGAGTGGGTATGGGGGTGCCAGGCCCTAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | CTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTGATCTGTGAGGACGTGTGCCTCCCAACCTaGCCTAGAGCCCAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LSVKLARSGFLTYLICEDVCLPT*PRAQAA Trigger: GGCTGCCTGGGCTCTAGGGCAGGTTGGGAGGCACAC...GTCCTCACAGATCAAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | GTGCATGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGCGGGTCCGGGCGTTCTaGTACAGCTCGAACACTTGC | + |
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Preference number: 4 (lower is better) Translates to: VHGSRETTSCRVRRKQFQRVRAF*YSSNTC Trigger: GCAAGTGTTCGAGCTGTACCAGAACGCCCGGACCCG...CTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | GTGCATGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGCGATGTTCTGGGGTTTaGTCGCCTGCTCCGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: VHGSRETTSCRVRRKQFQRCSGV*SPAPPP Trigger: TGGTGGCGGAGCAGGCGACCAAACCCCAGAACATCG...CTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | TTCTTAGGGCCTGGCACCCCCATACCCACTCCATCCCCAGTCATCATTTCTCTCAGTCTGCTGAATGGTTaGGACCACGTCCAGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLGPGTPIPTPSPVIISLSLLNG*DHVQKK Trigger: CTTCTTCTGGACGTGGTCCCAACCATTCAGCAGACT...GAGAGAAATGATGACTGGGGATGGAGTGGGTATGGGGGTGCCAGGCCCTAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | TGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCACAAGCAGATCACCAGTaGGTCCAGGGCACCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: WKSRNNFMQGEKKAVPEPQADHQ*VQGTTV Trigger: GACTGTGGTGCCCTGGACTCACTGGTGATCTGCTTG...TGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | AGGACTAAAGAGGAGGGCTTTCCCAGATTCTCAGGGAAAAGGCAGGTGAGTGATGCCGTATGTTCCCTTTaGAGGACCCGATGCAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: RTKEEGFPRFSGKRQVSDAVCSL*RTRCSR Trigger: TCGACTGCATCGGGTCCTGCAAAGGGAACATACGGC...ATCACTCACCTGCCTTTTCCCTGAGAATCTGGGAAAGCCCTCCTCTTTAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | TGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCACTCCACAACCATCTCTaGCAGGTCCACCGAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: WKSRNNFMQGEKKAVPEPLHNHL*QVHRVL Trigger: AAGCACTCGGTGGACCTGGCAGAGATGGTTGTGGAG...TGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | GTGCATGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGTGTCTCGATGTTCTaGGGTTTGGTCGCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VHGSRETTSCRVRRKQFQSVSMF*GLVACS Trigger: GGAGCAGGCGACCAAACCCCAGAACATCGAGACACT...CTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | TCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGACTAAGTCATCGTTGTAGTTaGCCAGCCTCCCCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRNNFMQGEKKAVPEPGLSHRCS*PASPEP Trigger: TGGCTCTGGGGAGGCTGGCCAACTACAACGATGACT...TAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | TGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCACTCTGGGGAGTGCTTTaGAATATCACTGAGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: WKSRNNFMQGEKKAVPEPLWGVL*NITEGR Trigger: TCGGCCCTCAGTGATATTTCAAAGCACTCCCCAGAG...TGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | GCATGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGGTGGCAGCACCTTACTaGACTGTCCAGCGACATACT | + |
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Preference number: 4 (lower is better) Translates to: AWKSRNNFMQGEKKAVPEVAAPY*TVQRHT Trigger: AGTATGTCGCTGGACAGTTCAGTAAGGTGCTGCCAC...CTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | CTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTGATCTGTGAGGACCTTTGCAGGACCCGATaGAGTCGATCACGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSVKLARSGFLTYLICEDLCRTR*SRSRQP Trigger: TGGCTGCCGTGATCGACTGCATCGGGTCCTGCAAAG...GTCCTCACAGATCAAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | GTGCATGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGGTCCTCAGAGCTCTCTaGGGACATGTACAAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VHGSRETTSCRVRRKQFQVLRAL*GHVQSQ Trigger: CTGGCTTTGTACATGTCCCCAGAGAGCTCTGAGGAC...CTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | TTCTTAGGGCCTGGCACCCCCATACCCACTCCATCCCCAGTCATCATTTCTCTCCCTTACTATTTCCTCTaGGTAGCAGCTGTTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: FLGPGTPIPTPSPVIISLPYYFL*VAAVDV Trigger: AACATCAACAGCTGCTACCCAGAGGAAATAGTAAGG...GAGAGAAATGATGACTGGGGATGGAGTGGGTATGGGGGTGCCAGGCCCTAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | GTGCATGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGCAGCTGCGAGAGCTCTaGTGTATGTTTTGCGATCTC | + |
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Preference number: 4 (lower is better) Translates to: VHGSRETTSCRVRRKQFQQLREL*CMFCDL Trigger: GAGATCGCAAAACATACACCAGAGCTCTCGCAGCTG...CTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | CACACTCTTTTCTGTCTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATAGCCCGAGCATGTTCTaGAGTGTGCCTCCCAACCTG | + |
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Preference number: 4 (lower is better) Translates to: HTLFCLSVKLARSGFLTYSPSMF*SVPPNL Trigger: CAGGTTGGGAGGCACACTCCAGAACATGCTCGGGCT...ATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAAGAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | CACTCTTTTCTGTCTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTAAGGCAGCAGTCTGCTaGATGGTTGGGACCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: HSFLSFCETGKVRFPYLFKAAVC*MVGTTS Trigger: GGACGTGGTCCCAACCATTCAGCAGACTGCTGCCTT...AAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | GCATGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGATCATCTGGGCTAAGTaGGCAATAGCTCCTACATCC | + |
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Preference number: 4 (lower is better) Translates to: AWKSRNNFMQGEKKAVPEIIWAK*AIAPTS Trigger: GGATGTAGGAGCTATTGCTCACTTAGCCCAGATGAT...CTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | TCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGACTAAGCTTTGCTGTCATGTaGCAGCACCTTACTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SRNNFMQGEKKAVPEPGLSFAVM*QHLTEL Trigger: CAGTTCAGTAAGGTGCTGCCACATGACAGCAAAGCT...TAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | AAGGTTTTCAAACAGCATGTCTCATTTACATCCAGTCCCAAGGATGCGTGTGTTGCTGAGAGGACCTGTTaGTTCAGTTTCTCATCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KVFKQHVSFTSSPKDACVAERTC*FSFSSG Trigger: CCCCGATGAGAAACTGAAGCAACAGGTCCTCTCAGC...AACACACGCATCCTTGGGACTGGATGTAAATGAGACATGCTGTTTGAAAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | TGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGCATTAACAATCAGCTaGGAGAGCTCTGGTGTATGT | + |
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Preference number: 4 (lower is better) Translates to: WKSRNNFMQGEKKAVPEPALTIS*ESSGVC Trigger: ACATACACCAGAGCTCTCGCAGCTGATTGTTAATGC...TGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | AGGACTAAAGAGGAGGGCTTTCCCAGATTCTCAGGGAAAAGGCAGGTGAGTGATTTTTTACTTTTCACCTaGAGGTCCTCAGAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RTKEEGFPRFSGKRQVSDFLLFT*RSSELS Trigger: AGAGAGCTCTGAGGACCTGCAGGTGAAAAGTAAAAA...ATCACTCACCTGCCTTTTCCCTGAGAATCTGGGAAAGCCCTCCTCTTTAGTCCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | CACACTCTTTTCTGTCTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATCAGCAGTCTGCTGAATaGTTGGGACCACGTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HTLFCLSVKLARSGFLTYQQSAE*LGPRPE Trigger: TTCTGGACGTGGTCCCAACCATTCAGCAGACTGCTG...ATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAAGAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | CACTCTTTTCTGTCTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTAGGCTGCAGCCTCCTTaGCTCCAGGGTCAAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: HSFLSFCETGKVRFPYLFRLQPP*LQGQNL Trigger: AAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCT...AAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | TGTCTCATTTACATCCAGTCCCAAGGATGCGTGTGTTGTGTTGTGTTTTATGTGGTTTCTCATCGGGGTTaGGGATCATCTGGGCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: CLIYIQSQGCVCCVVFYVVSHRG*GSSGLS Trigger: ACTTAGCCCAGATGATCCTCAACCCCGATGAGAAAC...CACATAAAACACAACACAACACACGCATCCTTGGGACTGGATGTAAATGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | GTGAAATGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTTGGGGTTTGGTCGCCTaGTCCGCCACCATCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: VKCVKSEAAASILKLYLIWGLVA*SATICT Trigger: TGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCA...AATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACATTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | CACTCTTTTCTGTCTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTAAAGCCGACGAGCTTTaGTGTCATGTGGCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: HSFLSFCETGKVRFPYLFKADEL*CHVAAP Trigger: AGGTGCTGCCACATGACAGCAAAGCTCGTCGGCTTT...AAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | CACTCTTTTCTGTCTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTGCCGCAGCCTTAATATaGTCTTCCGGTTCTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: HSFLSFCETGKVRFPYLFAAALI*SSGSSD Trigger: GTCAGAAGAACCGGAAGATCATATTAAGGCTGCGGC...AAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | TGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCATTCTGCATTATGCCTTaGAATATATGCAAGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: WKSRNNFMQGEKKAVPEPFCIMP*NICKCP Trigger: TGGGCACTTGCATATATTGCAAGGCATAATGCAGAA...TGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | TGGAAGTCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCACTCTGGTGTATGTTTTaGGATCTCTCTAATCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: WKSRNNFMQGEKKAVPEPLWCMF*DLSNQS Trigger: ACTCTGATTAGAGAGATCGCAAAACATACACCAGAG...TGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGACTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR TCA 90 bp | TGTTCTATTGGACTCTACTTTGACCCCCATTACAATTTCCTAAGTGAAATGTGTTGTAACCCAGCATCATaGTGCCAGGCAGCCGTATGT | + |
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Preference number: 4 (lower is better) Translates to: CSIGLYFDPHYNFLSEMCCNPAS*CQAAVC Trigger: ACATACGGCTGCCTGGCATCATGATGCTGGGTTACA...ACACATTTCACTTAGGAAATTGTAATGGGGGTCAAAGTAGAGTCCAATAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR GCA 90 bp | TCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGACTAGACAGTTCTGCATTATaGCTTGCAATATATGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SRNNFMQGEKKAVPEPGLDSSAL*LAIYAS Trigger: ACTTGCATATATTGCAAGGCATAATGCAGAACTGTC...TAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS-3UTR CCA 90 bp | TGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCCTAGGCAGTCTGACAACTaGGGTACACCCTTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CVKSEAAASILKLYLIIPRQSDN*GTPLEM Trigger: CATCTCCAAGGGTGTACCCCAGTTGTCAGACTGCCT...AGGGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR TCA 90 bp | AAGGTTTTCAAACAGCATGTCTCATTTACATCCAGTCCCAAGGATGCGTGTGTTCTGCAGAAGTATGTCTaGGTATCCAGGAGAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KVFKQHVSFTSSPKDACVLQKYV*VSRRIV Trigger: TACTATTCTCCTGGATACTCAGACATACTTCTGCAG...AACACACGCATCCTTGGGACTGGATGTAAATGAGACATGCTGTTTGAAAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR GCA 90 bp | TGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCCTATGCCTTGCAATATATaGAAGTGCCCAGGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVKSEAAASILKLYLIIPMPCNI*KCPGCS Trigger: GCTGCAGCCTGGGCACTTGCATATATTGCAAGGCAT...AGGGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCCTGCAGTCTCGGGCTCCTaGATACAGAGGACTAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVKSEAAASILKLYLIIPAVSGS*IQRTKR Trigger: TCTTTTAGTCCTCTGTATCCAGGAGCCCGAGACTGC...AGGGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTGATCTGTGAGGACTTGTTGATATACTCTTaGAGGATGGAACCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVKLARSGFLTYLICEDLLIYS*RMEPGS Trigger: AGAACCTGGTTCCATCCTCCAAGAGTATATCAACAA...GTCCTCACAGATCAAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR GCA 90 bp | TGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCCTGCTAACTCTGGGGAGTaGTTTGAAATATCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVKSEAAASILKLYLIIPANSGE*FEISLR Trigger: CCTCAGTGATATTTCAAAGCACTCCCCAGAGTTAGC...AGGGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR GCA 90 bp | AATGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCAACTGGGAAAATCTCTaGCTCCACAACCATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLNLRLLLAFSNYTLLSNWENL*LHNHLC Trigger: GCAGAGATGGTTGTGGAGGCAGAGATTTTCCCAGTT...GGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| 3UTR CAA 72 bp | TCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTaGATCTGTGAGGACGTAACTAAAGGTTTTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SVKLARSGFLTY*ICEDVTKGFQT Trigger: TGTTTGAAAACCTTTAGTTACGTCCTCACAGATCAAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CCA 90 bp | AATGTGTTAAATCTGAGGCTGCTGCTAGCATTCTCAAATTATACCTTATTATCCTCTGCTTTGATCTCTTaGATCTTTTTAAGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NVLNLRLLLAFSNYTLLSSALIS*IFLSPP Trigger: TGGTGGACTTAAAAAGATCCAAGAGATCAAAGCAGA...GGATAATAAGGTATAATTTGAGAATGCTAGCAGCAGCCTCAGATTTAACACATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS TCA 90 bp | ACCAGTGAGTCCAGGGCACCACAGTCAACTGTGGCCTGCGCCAGCTaGGGAGAGTGTTTACCAACCGCTCGCAGCACAAACGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSESRAPQSTVACAS*GECLPTARSTNAAA Trigger: GGCAGCTGCGTTTGTGCTGCGAGCGGTTGGTAAACACTCTCCTCAGCTGGCGCAGGCCACAGTTGACTGTGGTGCCCTGGACTCACTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
||
| CDS GCA 90 bp | AGTGTCTCGATGTTCTGGGGTTTGGTCGCCTGCTCCGCCACCATCTaGACAAACCGGGTCCGGGCGTTCTGGTACAGCTCGAACACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSMFWGLVACSATI*TNRVRAFWYSSNTC Trigger: GCAAGTGTTCGAGCTGTACCAGAACGCCCGGACCCGGTTTGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCAGAACATCGAGACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS GCA 90 bp | ATACCCGCATTCTGCAGTGTCTCGATGTTCTGGGGTTTGGTCGCCTaGTCCGCCACCATCTGCACAAACCGGGTCCGGGCGTTCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IPAFCSVSMFWGLVA*SATICTNRVRAFWY Trigger: GTACCAGAACGCCCGGACCCGGTTTGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCAGAACATCGAGACACTGCAGAATGCGGGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS GCA 90 bp | GGCAACGTGTTTGTGATGGCGACAGCCCGAGCATGTTCTGGAGTGTaGCTCCCAACCTGCCCTAGAGCCCAGGCAGCCGCAGCCTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: GNVFVMATARACSGV*LPTCPRAQAAAALI Trigger: TATTAAGGCTGCGGCTGCCTGGGCTCTAGGGCAGGTTGGGAGGCACACTCCAGAACATGCTCGGGCTGTCGCCATCACAAACACGTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 90 bp | CTTCCAAGCAGATCACCAGTGAGTCCAGGGCACCACAGTCAACTGTaGCCTGCGCCAGCTGAGGAGAGTGTTTACCAACCGCTCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSRSPVSPGHHSQL*PAPAEESVYQPLAA Trigger: TGCTGCGAGCGGTTGGTAAACACTCTCCTCAGCTGGCGCAGGCCACAGTTGACTGTGGTGCCCTGGACTCACTGGTGATCTGCTTGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
||
| CDS TCA 90 bp | GCCTCCACAACCATCTCTGCCAGGTCCACCGAGTGCTTCGCGATGTaGCTCAGAGCTGAGAGGACCTGTTGCTTCAGTTTCTCATCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASTTISARSTECFAM*LRAERTCCFSFSSG Trigger: CCCCGATGAGAAACTGAAGCAACAGGTCCTCTCAGCTCTGAGTCACATCGCGAAGCACTCGGTGGACCTGGCAGAGATGGTTGTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS TCA 90 bp | TCTCTGGGGACATGTACAAAGCCAGCAGCACGGGCAACGTGTTTGTaGTGGCGACAGCCCGAGCATGTTCTGGAGTGTGCCTCCCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGTCTKPAARATCL*WRQPEHVLECASQP Trigger: AGGTTGGGAGGCACACTCCAGAACATGCTCGGGCTGTCGCCATCACAAACACGTTGCCCGTGCTGCTGGCTTTGTACATGTCCCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 90 bp | AAGACATTATACCCGCATTCTGCAGTGTCTCGATGTTCTGGGGTTTaGTCGCCTGCTCCGCCACCATCTGCACAAACCGGGTCCGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KTLYPHSAVSRCSGV*SPAPPPSAQTGSGR Trigger: ACGCCCGGACCCGGTTTGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCAGAACATCGAGACACTGCAGAATGCGGGTATAATGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS TCA 90 bp | TGCCTCCCAACCTGCCCTAGAGCCCAGGCAGCCGCAGCCTTAATATaGTCTTCCGGTTCTTCTGACAGGCAGTCTGACAACTGGGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: CLPTCPRAQAAAALI*SSGSSDRQSDNWGT Trigger: TGTACCCCAGTTGTCAGACTGCCTGTCAGAAGAACCGGAAGATCATATTAAGGCTGCGGCTGCCTGGGCTCTAGGGCAGGTTGGGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 90 bp | GTTGGCCAGCCTCCCCAGAGCCAAGGCAGCAGTCTGCTGAATGGTTaGGACCACGTCCAGAAGAAGAGGCCTCAGCAAAGACATTATACC | + |
|
Preference number: 5 (lower is better) Translates to: VGQPPQSQGSSLLNG*DHVQKKRPQQRHYT Trigger: GGTATAATGTCTTTGCTGAGGCCTCTTCTTCTGGACGTGGTCCCAACCATTCAGCAGACTGCTGCCTTGGCTCTGGGGAGGCTGGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
||
| CDS TCA 90 bp | CCATGGCCAGGTTCTCAGAATGAGCAGCCATGTAACCCAGCATCATaGTGCCAGGCAGCCGTATGTTCCCTTTGCAGGACCCGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PWPGSQNEQPCNPAS*CQAAVCSLCRTRCS Trigger: ACTGCATCGGGTCCTGCAAAGGGAACATACGGCTGCCTGGCATCATGATGCTGGGTTACATGGCTGCTCATTCTGAGAACCTGGCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 90 bp | CTCAGCAAAGACATTATACCCGCATTCTGCAGTGTCTCGATGTTCTaGGGTTTGGTCGCCTGCTCCGCCACCATCTGCACAAACCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSKDIIPAFCSVSMF*GLVACSATICTNRV Trigger: GACCCGGTTTGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCAGAACATCGAGACACTGCAGAATGCGGGTATAATGTCTTTGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGGGCCTGGCACCCCCATACCCACTCCATCCCCAGTCATCATTTCTCTCAGTTTCTCATCGGGGTaGAGGATCATCTGGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLGPGTPIPTPSPVIISLSFSSG*RIIWAK Trigger: CTTAGCCCAGATGATCCTCAACCCCGATGAGAAACT...GAGAGAAATGATGACTGGGGATGGAGTGGGTATGGGGGTGCCAGGCCCTAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS GCA 90 bp | GTCATCTTTGTCCTTCAGACAGGTGAGAACAACTGGGAAAATCTCTaGCTCCACAACCATCTCTGCCAGGTCCACCGAGTGCTTCGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VIFVLQTGENNWENL*LHNHLCQVHRVLRD Trigger: ATCGCGAAGCACTCGGTGGACCTGGCAGAGATGGTTGTGGAGGCAGAGATTTTCCCAGTTGTTCTCACCTGTCTGAAGGACAAAGATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTGATCTGTGAGGACGTACAGCTCGAACACTaGCAGCACCTGCCGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSVKLARSGFLTYLICEDVQLEH*QHLPLA Trigger: AGCCAGCGGCAGGTGCTGCAAGTGTTCGAGCTGTAC...GTCCTCACAGATCAAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | CACACTCTTTTCTGTCTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTCGATGTTCTGGGGTTaGGTCGCCTGCTCCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HTLFCLSVKLARSGFLTYSMFWG*VACSAT Trigger: GGTGGCGGAGCAGGCGACCAAACCCCAGAACATCGA...ATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAGACAGAAAAGAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | TCGAGAAACAACTTCATGCAGGGTGAGAAGAAAGCAGTTCCAGAGCCAGGACTACAGGCTGCAGCCTCCTaGACTCCAGGGTCAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SRNNFMQGEKKAVPEPGLQAAAS*TPGSKS Trigger: AGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTG...TAGTCCTGGCTCTGGAACTGCTTTCTTCTCACCCTGCATGAAGTTGTTTCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | AGGACTAAAGAGGAGGGCTTTCCCAGATTCTCAGGGAAAAGGCAGGTGAGTGATCGCATCCACCACAGCTaGCGACAGTTCTGCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: RTKEEGFPRFSGKRQVSDRIHHS*RQFCIM Trigger: CATAATGCAGAACTGTCGCAAGCTGTGGTGGATGCG...ATCACTCACCTGCCTTTTCCCTGAGAATCTGGGAAAGCCCTCCTCTTTAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS TCA 90 bp | TGTTGCTTCAGTTTCTCATCGGGGTTGAGGATCATCTGGGCTAAGTaGGCAATAGCTCCTACATCCACCACCGTTTGTGCTAACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCFSFSSGLRIIWAK*AIAPTSTTVCANSG Trigger: CCCAGAGTTAGCACAAACGGTGGTGGATGTAGGAGCTATTGCTCACTTAGCCCAGATGATCCTCAACCCCGATGAGAAACTGAAGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS GCA 90 bp | GCAATAGCTCCTACATCCACCACCGTTTGTGCTAACTCTGGGGAGTaGTTTGAAATATCACTGAGGGCCGAGGCAGCGATCCTTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AIAPTSTTVCANSGE*FEISLRAEAAILFK Trigger: TTTGAAAAGGATCGCTGCCTCGGCCCTCAGTGATATTTCAAAGCACTCCCCAGAGTTAGCACAAACGGTGGTGGATGTAGGAGCTATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 90 bp | CACGGCAGCCACACCTCCGGCATTAACAATCAGCTGCGAGAGCTCTaGTGTATGTTTTGCGATCTCTCTAATCAGAGTACAAGCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HGSHTSGINNQLREL*CMFCDLSNQSTSIL Trigger: AAGAATGCTTGTACTCTGATTAGAGAGATCGCAAAACATACACCAGAGCTCTCGCAGCTGATTGTTAATGCCGGAGGTGTGGCTGCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGGGCCTGGCACCCCCATACCCACTCCATCCCCAGTCATCATTTCTCTCGAGGTAGGTGCATTTTaGGATGATATTCTTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLGPGTPIPTPSPVIISLEVGAF*DDILYG Trigger: GCCATAAAGAATATCATCCAAAAATGCACCTACCTC...GAGAGAAATGATGACTGGGGATGGAGTGGGTATGGGGGTGCCAGGCCCTAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS TCA 90 bp | CACAAACGCAGCTGCCTTCTTGTAGACACAATTCTGCTCTGCCAATaGATACACAAGCTGTGGAAGAATGTCACCCTTCACGACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKRSCLLVDTILLCQ*IHKLWKNVTLHDCF Trigger: GAAGCAGTCGTGAAGGGTGACATTCTTCCACAGCTTGTGTATTCATTGGCAGAGCAGAATTGTGTCTACAAGAAGGCAGCTGCGTTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTTTTCAAACAGCATGTCTCATTTACATCCAGTCCCAAGGATGCGTGTGTTCAGTCTGCTGAATGGTaGGGACCACGTCCAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KVFKQHVSFTSSPKDACVQSAEW*GPRPEE Trigger: TTCTTCTGGACGTGGTCCCAACCATTCAGCAGACTG...AACACACGCATCCTTGGGACTGGATGTAAATGAGACATGCTGTTTGAAAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS GCA 90 bp | ACCTCCGGCATTAACAATCAGCTGCGAGAGCTCTGGTGTATGTTTTaGGATCTCTCTAATCAGAGTACAAGCATTCTTCTTCACGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSGINNQLRELWCMF*DLSNQSTSILLHEV Trigger: GACTTCGTGAAGAAGAATGCTTGTACTCTGATTAGAGAGATCGCAAAACATACACCAGAGCTCTCGCAGCTGATTGTTAATGCCGGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTGATCTGTGAGGACGTTGTTGATATACTCTaGGAGGATGGAACCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVKLARSGFLTYLICEDVVDIL*EDGTRF Trigger: GAACCTGGTTCCATCCTCCAAGAGTATATCAACAAC...GTCCTCACAGATCAAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS TCA 90 bp | GTTAATAAGAGGCTGATAGCTGTCGATCCTCTGCAGAAGTATGTCTaGGTATCCAGGAGAATAGTACCTTACTATTTCCTCTGGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VNKRLIAVDPLQKYV*VSRRIVPYYFLWVA Trigger: TGCTACCCAGAGGAAATAGTAAGGTACTATTCTCCTGGATACTCAGACATACTTCTGCAGAGGATCGACAGCTATCAGCCTCTTATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 90 bp | TTGATATACTCTTGGAGGATGGAACCAGGTTCTGCTTTGATCTCTTaGATCTTTTTAAGTCCACCACTTGTTACAAAAAGCCGACGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LIYSWRMEPGSALIS*IFLSPPLVTKSRRA Trigger: AGCTCGTCGGCTTTTTGTAACAAGTGGTGGACTTAAAAAGATCCAAGAGATCAAAGCAGAACCTGGTTCCATCCTCCAAGAGTATATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTGTGAAACTGGCAAGGTCAGGTTTCCTTACCTATTTGATCTGTGAGGACGAACCAGGTTCTGCTTaGATCTCTTGGATCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSVKLARSGFLTYLICEDEPGSA*ISWIFL Trigger: TAAAAAGATCCAAGAGATCAAAGCAGAACCTGGTTC...GTCCTCACAGATCAAATAGGTAAGGAAACCTGACCTTGCCAGTTTCACAGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS GCA 90 bp | GCTGTTGATGTTGTTGATATACTCTTGGAGGATGGAACCAGGTTCTaGTTTGATCTCTTGGATCTTTTTAAGTCCACCACTTGTTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVDVVDILLEDGTRF*FDLLDLFKSTTCYK Trigger: TTTGTAACAAGTGGTGGACTTAAAAAGATCCAAGAGATCAAAGCAGAACCTGGTTCCATCCTCCAAGAGTATATCAACAACATCAACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 72 bp | TCCGCCACCATCTGCACAAACCGGGTCCGGGCGTTCTaGTACAGCTCGAACACTTGCAGCACCTGCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SATICTNRVRAF*YSSNTCSTCRW Trigger: CCAGCGGCAGGTGCTGCAAGTGTTCGAGCTGTACCAGAACGCCCGGACCCGGTTTGTGCAGATGGTGGCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS GCA 72 bp | ATGTTCTGGGGTTTGGTCGCCTGCTCCGCCACCATCTaGACAAACCGGGTCCGGGCGTTCTGGTACAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: MFWGLVACSATI*TNRVRAFWYSS Trigger: CGAGCTGTACCAGAACGCCCGGACCCGGTTTGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCAGAACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS TCA 72 bp | TCCAGGGCACCACAGTCAACTGTGGCCTGCGCCAGCTaGGGAGAGTGTTTACCAACCGCTCGCAGCACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRAPQSTVACAS*GECLPTARSTN Trigger: GTTTGTGCTGCGAGCGGTTGGTAAACACTCTCCTCAGCTGGCGCAGGCCACAGTTGACTGTGGTGCCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
||
| CDS CAA 72 bp | CCCAGCATCATGATGCCAGGCAGCCGTATGTTCCCTTaGCAGGACCCGATGCAGTCGATCACGGCAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PSIMMPGSRMFP*QDPMQSITAAT Trigger: TGTGGCTGCCGTGATCGACTGCATCGGGTCCTGCAAAGGGAACATACGGCTGCCTGGCATCATGATGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CAA 90 bp | AAAGACATTATACCCGCATTCTGCAGTGTCTCGATGTTCTGGGGTTaGGTCGCCTGCTCCGCCACCATCTGCACAAACCGGGTCCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KDIIPAFCSVSMFWG*VACSATICTNRVRA Trigger: CGCCCGGACCCGGTTTGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCAGAACATCGAGACACTGCAGAATGCGGGTATAATGTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
||
| CDS CCA 72 bp | CCTCCCCAGAGCCAAGGCAGCAGTCTGCTGAATGGTTaGGACCACGTCCAGAAGAAGAGGCCTCAGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PPQSQGSSLLNG*DHVQKKRPQQR Trigger: TCTTTGCTGAGGCCTCTTCTTCTGGACGTGGTCCCAACCATTCAGCAGACTGCTGCCTTGGCTCTGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
||
| CDS CCA 72 bp | AGATCACCAGTGAGTCCAGGGCACCACAGTCAACTGTaGCCTGCGCCAGCTGAGGAGAGTGTTTACCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: RSPVSPGHHSQL*PAPAEESVYQP Trigger: CGGTTGGTAAACACTCTCCTCAGCTGGCGCAGGCCACAGTTGACTGTGGTGCCCTGGACTCACTGGTGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
||
| CDS CAA 72 bp | ATACCCGCATTCTGCAGTGTCTCGATGTTCTGGGGTTaGGTCGCCTGCTCCGCCACCATCTGCACAAACCGG | + |
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Preference number: 6 (lower is better) Translates to: IPAFCSVSMFWG*VACSATICTNR Trigger: CCGGTTTGTGCAGATGGTGGCGGAGCAGGCGACCAAACCCCAGAACATCGAGACACTGCAGAATGCGGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS TCA 72 bp | ACATGTACAAAGCCAGCAGCACGGGCAACGTGTTTGTaGTGGCGACAGCCCGAGCATGTTCTGGAGTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: TCTKPAARATCL*WRQPEHVLECA Trigger: GGCACACTCCAGAACATGCTCGGGCTGTCGCCATCACAAACACGTTGCCCGTGCTGCTGGCTTTGTACATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS CAA 90 bp | AGTTGGCCAGCCTCCCCAGAGCCAAGGCAGCAGTCTGCTGAATGGTaGGGACCACGTCCAGAAGAAGAGGCCTCAGCAAAGACATTATAC | + |
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Preference number: 6 (lower is better) Translates to: SWPASPEPRQQSAEW*GPRPEEEASAKTLY Trigger: GTATAATGTCTTTGCTGAGGCCTCTTCTTCTGGACGTGGTCCCAACCATTCAGCAGACTGCTGCCTTGGCTCTGGGGAGGCTGGCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
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| CDS TCA 72 bp | ACCATCTCTGCCAGGTCCACCGAGTGCTTCGCGATGTaGCTCAGAGCTGAGAGGACCTGTTGCTTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TISARSTECFAM*LRAERTCCFSF Trigger: GAAACTGAAGCAACAGGTCCTCTCAGCTCTGAGTCACATCGCGAAGCACTCGGTGGACCTGGCAGAGATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS TCA 72 bp | ACCTGCCCTAGAGCCCAGGCAGCCGCAGCCTTAATATaGTCTTCCGGTTCTTCTGACAGGCAGTCTGACAAC | + |
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Preference number: 6 (lower is better) Translates to: TCPRAQAAAALI*SSGSSDRQSDN Trigger: GTTGTCAGACTGCCTGTCAGAAGAACCGGAAGATCATATTAAGGCTGCGGCTGCCTGGGCTCTAGGGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS TCA 72 bp | GGTTCTCAGAATGAGCAGCCATGTAACCCAGCATCATaGTGCCAGGCAGCCGTATGTTCCCTTTGCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: GSQNEQPCNPAS*CQAAVCSLCRT Trigger: GGTCCTGCAAAGGGAACATACGGCTGCCTGGCATCATGATGCTGGGTTACATGGCTGCTCATTCTGAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS GCA 72 bp | CCTACATCCACCACCGTTTGTGCTAACTCTGGGGAGTaGTTTGAAATATCACTGAGGGCCGAGGCAGCGATC | + |
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Preference number: 6 (lower is better) Translates to: PTSTTVCANSGE*FEISLRAEAAI Trigger: GATCGCTGCCTCGGCCCTCAGTGATATTTCAAAGCACTCCCCAGAGTTAGCACAAACGGTGGTGGATGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS GCA 72 bp | GTCCTTCAGACAGGTGAGAACAACTGGGAAAATCTCTaGCTCCACAACCATCTCTGCCAGGTCCACCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VLQTGENNWENL*LHNHLCQVHRV Trigger: CACTCGGTGGACCTGGCAGAGATGGTTGTGGAGGCAGAGATTTTCCCAGTTGTTCTCACCTGTCTGAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS TCA 72 bp | GCCGACGAGCTTTGCTGTCATGTGGCAGCACCTTACTaGACTGTCCAGCGACATACTTCAGGATATTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ADELCCHVAAPY*TVQRHTSGYWE Trigger: CTCCCAATATCCTGAAGTATGTCGCTGGACAGTTCAGTAAGGTGCTGCCACATGACAGCAAAGCTCGTCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS GCA 72 bp | AGCTTGCGACAGTTCTGCATTATGCCTTGCAATATATaGAAGTGCCCAGGCTGCAGCCTCCTTGACTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLRQFCIMPCNI*KCPGCSLLDSR Trigger: CCTGGAGTCAAGGAGGCTGCAGCCTGGGCACTTGCATATATTGCAAGGCATAATGCAGAACTGTCGCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
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| CDS TCA 72 bp | AGTTTCTCATCGGGGTTGAGGATCATCTGGGCTAAGTaGGCAATAGCTCCTACATCCACCACCGTTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SFSSGLRIIWAK*AIAPTSTTVCA Trigger: AGCACAAACGGTGGTGGATGTAGGAGCTATTGCTCACTTAGCCCAGATGATCCTCAACCCCGATGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS GCA 72 bp | TGCATTATGCCTTGCAATATATGCAAGTGCCCAGGCTaGAGCCTCCTTGACTCCAGGGTCAAAATCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CIMPCNICKCPG*SLLDSRVKIFQ Trigger: TTGGAAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTGGGCACTTGCATATATTGCAAGGCATAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
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| CDS GCA 72 bp | ACTAAAAGAGGAACAGCTCCCGCATCCACCACAGCTTaGGACAGTTCTGCATTATGCCTTGCAATATATGCA | + |
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Preference number: 6 (lower is better) Translates to: TKRGTAPASTTA*DSSALCLAIYA Trigger: TGCATATATTGCAAGGCATAATGCAGAACTGTCGCAAGCTGTGGTGGATGCGGGAGCTGTTCCTCTTTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095132.10 ENSMUST00000173763.2 |
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| CDS CCA 72 bp | CACACCTCCGGCATTAACAATCAGCTGCGAGAGCTCTaGTGTATGTTTTGCGATCTCTCTAATCAGAGTACA | + |
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Preference number: 6 (lower is better) Translates to: HTSGINNQLREL*CMFCDLSNQST Trigger: TGTACTCTGATTAGAGAGATCGCAAAACATACACCAGAGCTCTCGCAGCTGATTGTTAATGCCGGAGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS CCA 72 bp | ACTTGTTACAAAAAGCCGACGAGCTTTGCTGTCATGTaGCAGCACCTTACTGAACTGTCCAGCGACATACTT | + |
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Preference number: 6 (lower is better) Translates to: TCYKKPTSFAVM*QHLTELSSDIL Trigger: AAGTATGTCGCTGGACAGTTCAGTAAGGTGCTGCCACATGACAGCAAAGCTCGTCGGCTTTTTGTAACAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS TCA 72 bp | AGGCTGATAGCTGTCGATCCTCTGCAGAAGTATGTCTaGGTATCCAGGAGAATAGTACCTTACTATTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RLIAVDPLQKYV*VSRRIVPYYFL Trigger: GAGGAAATAGTAAGGTACTATTCTCCTGGATACTCAGACATACTTCTGCAGAGGATCGACAGCTATCAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS CAA 90 bp | ATCTCTCTAATCAGAGTACAAGCATTCTTCTTCACGAAGTCATCTTaGTCCTTCAGACAGGTGAGAACAACTGGGAAAATCTCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISLIRVQAFFFTKSS*SFRQVRTTGKISAS Trigger: GGAGGCAGAGATTTTCCCAGTTGTTCTCACCTGTCTGAAGGACAAAGATGACTTCGTGAAGAAGAATGCTTGTACTCTGATTAGAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS GCA 72 bp | GTTGTTGATATACTCTTGGAGGATGGAACCAGGTTCTaGTTTGATCTCTTGGATCTTTTTAAGTCCACCACT | + |
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Preference number: 6 (lower is better) Translates to: VVDILLEDGTRF*FDLLDLFKSTT Trigger: AGTGGTGGACTTAAAAAGATCCAAGAGATCAAAGCAGAACCTGGTTCCATCCTCCAAGAGTATATCAACAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS CAA 72 bp | ATCAGAGTACAAGCATTCTTCTTCACGAAGTCATCTTaGTCCTTCAGACAGGTGAGAACAACTGGGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: IRVQAFFFTKSS*SFRQVRTTGKI Trigger: GATTTTCCCAGTTGTTCTCACCTGTCTGAAGGACAAAGATGACTTCGTGAAGAAGAATGCTTGTACTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS CAA 90 bp | TACTATTTCCTCTGGGTAGCAGCTGTTGATGTTGTTGATATACTCTaGGAGGATGGAACCAGGTTCTGCTTTGATCTCTTGGATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: YYFLWVAAVDVVDIL*EDGTRFCFDLLDLF Trigger: AAAAAGATCCAAGAGATCAAAGCAGAACCTGGTTCCATCCTCCAAGAGTATATCAACAACATCAACAGCTGCTACCCAGAGGAAATAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS GCA 72 bp | ATTAACAATCAGCTGCGAGAGCTCTGGTGTATGTTTTaGGATCTCTCTAATCAGAGTACAAGCATTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: INNQLRELWCMF*DLSNQSTSILL Trigger: AAGAAGAATGCTTGTACTCTGATTAGAGAGATCGCAAAACATACACCAGAGCTCTCGCAGCTGATTGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS CAA 72 bp | TTGATATACTCTTGGAGGATGGAACCAGGTTCTGCTTaGATCTCTTGGATCTTTTTAAGTCCACCACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LIYSWRMEPGSA*ISWIFLSPPLV Trigger: AACAAGTGGTGGACTTAAAAAGATCCAAGAGATCAAAGCAGAACCTGGTTCCATCCTCCAAGAGTATATCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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| CDS CAA 90 bp | TTGATGTTGTTGATATACTCTTGGAGGATGGAACCAGGTTCTGCTTaGATCTCTTGGATCTTTTTAAGTCCACCACTTGTTACAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LMLLIYSWRMEPGSA*ISWIFLSPPLVTKS Trigger: GCTTTTTGTAACAAGTGGTGGACTTAAAAAGATCCAAGAGATCAAAGCAGAACCTGGTTCCATCCTCCAAGAGTATATCAACAACATCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095132.10 |
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