RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPAG5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002055

Ensembl transcript IDs: ENSMUST00000045026.4

Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGTTAGGTTCCCAAATTCCTGGGATTTGGCAGCACTCCAACTTTaGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGCATTC +
Preference number: 1 (lower is better)
Translates to: CVRFPNSWDLAALQL*RLEQLELQVHTTAF
Trigger: GAATGCAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTGCCAAATCCCAGGAATTTGGGAACCTAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CCA 90 bp GGTTCCCAAATTCCTGGGATTTGGCAGCACTCCAACTTTGGCGTCTaGAGCAGCTGGAACTACAGGTGCACACCACTGCATTCCAATATT +
Preference number: 1 (lower is better)
Translates to: GSQIPGIWQHSNFGV*SSWNYRCTPLHSNI
Trigger: AATATTGGAATGCAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTGCCAAATCCCAGGAATTTGGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CCA 90 bp ATTCCTGGGATTTGGCAGCACTCCAACTTTGGCGTCTGGAGCAGCTaGAACTACAGGTGCACACCACTGCATTCCAATATTTTCAGTTTC +
Preference number: 1 (lower is better)
Translates to: IPGIWQHSNFGVWSS*NYRCTPLHSNIFSF
Trigger: GAAACTGAAAATATTGGAATGCAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTGCCAAATCCCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR GCA 90 bp CCTGAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTaGTGTGTTGTCTGTGTTAGGTTCCCAAATTCCTGGGATTTGGCA +
Preference number: 1 (lower is better)
Translates to: PEGNWSGVEFIFQGF*CVVCVRFPNSWDLA
Trigger: TGCCAAATCCCAGGAATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR TCA 90 bp GCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTaGAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTG +
Preference number: 1 (lower is better)
Translates to: ANWSYYWDKGWDKEP*RKLEWSGIHFSGFL
Trigger: CAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CCA 90 bp CTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACTaGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTC +
Preference number: 1 (lower is better)
Translates to: LIIGIRVGIKSPEGN*SGVEFIFQGFCCVV
Trigger: GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CAA 90 bp GGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTCCTGGGATTaGGCAGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAG +
Preference number: 2 (lower is better)
Translates to: GFCCVVCVRFPNSWD*AALQLWRLEQLELQ
Trigger: CTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTGCCAAATCCCAGGAATTTGGGAACCTAACACAGACAACACAGCAAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR-3UTR GCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTAGCTGGAACTACAGGTaGACACCACTGCATTCCAAT +
Preference number: 2 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSSWNYR*TPLHSN
Trigger: ATTGGAATGCAGTGGTGTGCACCTGTAGTTCCAGCT...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR-3UTR GCA 90 bp CCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACACAGGTGCACACCACTaGATTCCAATATTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: PIGLIIGIRVGIKSPEGNTGAHH*IPIFSV
Trigger: AACTGAAAATATTGGAATGCAGTGGTGTGCACCTGT...GTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CCA 72 bp GGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACTaGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: GIRVGIKSPEGN*SGVEFIFQGFC
Trigger: GCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR-3UTR CAA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGGGTTTTTGCTGTGTaGTCTGTGTTAGGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKRVFAV*SVLGSQ
Trigger: TTGGGAACCTAACACAGACAACACAGCAAAAACCCT...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR GCA 72 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTaGTGTGTTGTCTGTGTTAGGTTCCCAAATTCCTGG +
Preference number: 3 (lower is better)
Translates to: NWSGVEFIFQGF*CVVCVRFPNSW
Trigger: CCAGGAATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR TCA 72 bp TCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTaGAGGAAACTGGAGTGGAGTGGAATTCATTTTTCA +
Preference number: 3 (lower is better)
Translates to: SYYWDKGWDKEP*RKLEWSGIHFS
Trigger: TGAAAAATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CCA 72 bp TTAAATAACATAAAACATGGTCGGCTCTATGCCAATTaGTCTTATTATTGGGATAAGGGTTGGGATAAAGAG +
Preference number: 3 (lower is better)
Translates to: LNNIKHGRLYAN*SYYWDKGWDKE
Trigger: CTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCATGTTTTATGTTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp CAGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGGTGAGACTCTGCAGCTaGTCAGCCAGTAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QHSNFGVWSSWNYRCTPLVRLCS*SASSRS
Trigger: GCTGCGGCTACTGGCTGAGCAGCTGCAGAGTCTCAC...CAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGCTCACAGATTTCCCTCTaGAGGACCCCAGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: STPTLASGAAGTTGAHHCSQISL*RTPVAS
Trigger: GGAGGCCACTGGGGTCCTGCAGAGGGAAATCTGTGA...GCAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp CAGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGGGGGTCTCTGTAGGCTaGAAGGAAGCCATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QHSNFGVWSSWNYRCTPLGVSVG*KEAIEA
Trigger: AGCCTCAATGGCTTCCTTTCAGCCTACAGAGACCCC...CAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp AGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGCAGATGCTGCTGTCATTaGACAGAGGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: STPTLASGAAGTTGAHHCRCCCH*TEGVPG
Trigger: CCCAGGAACACCCTCTGTCCAATGACAGCAGCATCT...GCAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGCTCCTTTTGTTCTGTGTaGAGCCCTATCAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: STPTLASGAAGTTGAHHCSFCSV*SPISWV
Trigger: GACCCAACTGATAGGGCTTCACACAGAACAAAAGGA...GCAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp CAGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGATCAGGTCTTGCTGCTaGCCTAATGAAAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QHSNFGVWSSWNYRCTPLIRSCC*PNEKGR
Trigger: TCTGCCCTTTTCATTAGGGCAGCAGCAAGACCTGAT...CAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCCTGAGGGTCTCACACTaGAGGCTGCGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVLRVSH*RLRSRS
Trigger: ACTGCGGGAGCGCAGCCTGCAGTGTGAGACCCTCAG...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CAA 72 bp TGTGTTGTCTGTGTTAGGTTCCCAAATTCCTGGGATTaGGCAGCACTCCAACTTTGGCGTCTGGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CVVCVRFPNSWD*AALQLWRLEQL
Trigger: CAGCTGCTCCAGACGCCAAAGTTGGAGTGCTGCCAAATCCCAGGAATTTGGGAACCTAACACAGACAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGCTGGGCCAGGACAGCTaGAGGAGAAAGACGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKLGQDS*RRKTSQ
Trigger: CTGGCTCGTCTTTCTCCTTCAGCTGTCCTGGCCCAG...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGCAGCATCACGTTCCTaGAGGGCCTGCCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSAASRS*RACRLL
Trigger: CAAGAGCCGGCAGGCCCTTCAGGAACGTGATGCTGC...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AACATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATATGTCCACAGTGTCCCTaGGGGTCTCACACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: NMVGSMPIGLIIGIRVGICPQCP*GSHTAG
Trigger: GCCTGCAGTGTGAGACCCTCAGGGACACTGTGGACA...TATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGCCTTCAGGGCTTCCTaGTGCTCTTCTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPAFRAS*CSSSWA
Trigger: GGCCCAAGAAGAAGAGCATCAGGAAGCCCTGAAGGC...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGGCCGAAGTGACTGTGTaGGCTGGGTCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKAEVTV*AGSPPL
Trigger: GAGAGGAGGTGACCCAGCTCACACAGTCACTTCGGC...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AACATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAGAAAGCCTCCAGTACTaGCTCTGCCGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: NMVGSMPIGLIIGIRVGIESLQY*LCRSLA
Trigger: GGCAAGGCTGCGGCAGAGGCAGTACTGGAGGCTTTC...TATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AACATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAGTCTTCCACACAAGGTaGCACCTCCTTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: NMVGSMPIGLIIGIRVGIVFHTR*HLLPHQ
Trigger: CTGGTGGGGAAGGAGGTGGCACCTTGTGTGGAAGAC...TATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTTTTGCAGCAGGTGCTTaGTCTCCCAATTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPFAAGA*SPNSAS
Trigger: GGAGGCCGAATTGGGAGACCAAGCACCTGCTGCAAA...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTTCTACTGTTGGGCCTaGGGCTTCCCGGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: VEFIFQGFCCVVCVRFPNFYCWA*GFPGPH
Trigger: ATGGGGCCCCGGGAAGCCCCAGGCCCAACAGTAGAA...ATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGGTGCCTACCTCCAGTaGTGCTGGAGGAGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPGAYLQ*CWRSKG
Trigger: TCCTTTACTCCTCCAGCACCACTGGAGGTAGGCACC...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGCTTTGCTTCAGTGCTaGCCAGCTCAGCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLALLQC*PAQPSG
Trigger: GCCTGAGGGCTGAGCTGGCCAGCACTGAAGCAAAGC...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGACAGAGGGTGTTCCTaGGCTGGAGCAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSDRGCS*AGAEPV
Trigger: CACAGGCTCTGCTCCAGCCCAGGAACACCCTCTGTC...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTCAGCTGGGATCTAGCTaGCCTTCCAGGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVQLGSS*PSRASW
Trigger: CCAGGAAGCCCTGGAAGGCCAGCTAGATCCCAGCTG...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp GTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATCCTGTTCCAGTTGGCTaGTGCGCTGGCTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: VEFIFQGFCCVVCVRFPNPVPVG*CAGWHV
Trigger: CACATGCCAGCCAGCGCATCAGCCAACTGGAACAGG...ATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGCCTACCTCCAGTGGTaGTGGAGGAGTAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPAYLQW*WRSKGS
Trigger: ACTTCCTTTACTCCTCCAGCACCACTGGAGGTAGGC...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp ATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACTGGAGTGGAGTGGAATTCATTGCCAACACAGCCTGCTaGTGTAGCAGTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IRVGIKSPEGNWSGVEFIANTAC*CSSSAC
Trigger: ACAAGCAGAACTGCTACAGCAGCAGGCTGTGTTGGC...AATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGTCTCACACTGCAGGCTaGGCTCCCGCAGTAACTCTA +
Preference number: 4 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKSHTAG*APAVTL
Trigger: TAGAGTTACTGCGGGAGCGCAGCCTGCAGTGTGAGA...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTAGGGCCTGTTTCTCATaGTTTGCTTCAGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPRACFS*FASVLA
Trigger: GGCCAGCACTGAAGCAAAGCATGAGAAACAGGCCCT...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGAAGAGGGTGAGACTCTaGAGCTGCTCAGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ETGVEWNSFFRVFAVLSVKRVRL*SCSASS
Trigger: GCTACTGGCTGAGCAGCTGCAGAGTCTCACCCTCTT...CACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCAGTTGGCTGATGCGCTaGCTGGCATGTGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVSWLMR*LACARK
Trigger: TTTCCGTGCACATGCCAGCCAGCGCATCAGCCAACT...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAAGACCCTGTTCCAGTTaGCTGATGCGCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLRPCSS*LMRWLA
Trigger: TGCCAGCCAGCGCATCAGCCAACTGGAACAGGGTCT...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp TGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTAGGGTGTTCCTGGGCTaGAGCAGAGCCTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WNSFFRVFAVLSVLGSQIRVFLG*SRACAG
Trigger: CCCAGCACAGGCTCTGCTCCAGCCCAGGAACACCCT...AATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp CCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACCTGAAAGGAAGCCATTaGGGCTACTCGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: PIGLIIGIRVGIKSPEGNLKGSH*GYSGES
Trigger: GCTTTCACCCGAGTAGCCTCAATGGCTTCCTTTCAG...GTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp CGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGGAGCATCAGGTCTTaGTGCTGCCCTAATGAAAAG +
Preference number: 4 (lower is better)
Translates to: RLYANWSYYWDKGWDKEPWSIRS*CCPNEK
Trigger: CTTTTCATTAGGGCAGCAGCAAGACCTGATGCTCCA...GGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTGACGGCTTCTGCATTTaGAGCAGGTGCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVDGFCI*SRCLVS
Trigger: GGAGACCAAGCACCTGCTGCAAATGCAGAAGCCGTC...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp ATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACTGGAGTGGAGTGGAATTCATTGCCATTTCCTTGCTGTaGCTTGCCTCCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: IRVGIKSPEGNWSGVEFIAISLL*LASSHS
Trigger: AGAATGTGAGGAGGCAAGGCACAGCAAGGAAATGGC...AATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp TGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTGCGCTGGCTGGCATGTaGACGGAAAGCCTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: WNSFFRVFAVLSVLGSQIALAGM*TESLQY
Trigger: GTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGC...AATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp CCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACGATGTCCAGTCCTGCTaGAAGGCAGAACTCAGACTC +
Preference number: 4 (lower is better)
Translates to: PIGLIIGIRVGIKSPEGNDVQSC*KAELRL
Trigger: GAGTCTGAGTTCTGCCTTGCAGCAGGACTGGACATC...GTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTCATGCTTTGCTTCAGTaGTGGCCAGCTCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSHALLQ*WPAQPS
Trigger: TGAGGGCTGAGCTGGCCAGCACTGAAGCAAAGCATG...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp ATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACTGGAGTGGAGTGGAATTCATTCTGTTTCTCATGCTTTaGTTCAGTGCTGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IRVGIKSPEGNWSGVEFILFLML*FSAGQL
Trigger: GAGCTGGCCAGCACTGAAGCAAAGCATGAGAAACAG...AATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTCGACAGAGAAATCCTaGGCCAGGACAGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: ETGVEWNSFFRVFAVLSVSTEKS*ARTAEG
Trigger: TCCTTCAGCTGTCCTGGCCCAGGATTTCTCTGTCGA...CACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCACTGAAGTACTGTCCTTaGTGCCTACCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GVEFIFQGFCCVVCVRFPLKYCP*CLPPVV
Trigger: CACCACTGGAGGTAGGCACCAAGGACAGTACTTCAG...TGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTCAGGCTTGTAGCTGGTaGGAAAGAACTTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPQACSW*ERTSSK
Trigger: CTTGCTGGAAGTTCTTTCCCACCAGCTACAAGCCTG...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTCTCCCTCAGGTCCTaGACCTCCTTAGCCAACACA +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSVSLRS*TSLANT
Trigger: TGTGTTGGCTAAGGAGGTCCAGGACCTGAGGGAGAC...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp ATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACTGGAGTGGAGTGGAATTCATTAACACTTCCAAGCAATaGCACAGGAGCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: IRVGIKSPEGNWSGVEFINTSKQ*HRSWFW
Trigger: CCAGAACCAGCTCCTGTGCCATTGCTTGGAAGTGTT...AATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTTAGTAGCCATCAGCTaGCAGCTGGGATCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVLVAIS*QLGSSW
Trigger: CCAGCTAGATCCCAGCTGCCAGCTGATGGCTACTAA...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp GAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGCCAACGGCAGCATCCTaGAGCACAGAAGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: ETGVEWNSFFRVFAVLSVPTAAS*STEEKD
Trigger: ATCCTTTTCTTCTGTGCTTCAGGATGCTGCCGTTGG...CACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGAAACCAGGGTTTTTaGCCGCTGAGACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLGNQGF*PLRLLT
Trigger: AGTCAGGAGTCTCAGCGGTCAAAAACCCTGGTTTCC...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTGTCAGAATCTGCAGCTaGGCCGAGAGATCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVVRICS*AERSAV
Trigger: TACTGCAGATCTCTCGGCTCAGCTGCAGATTCTGAC...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTTCTTCCTTTTGCCATTaGGTAGCCTGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPSSFCH*VACSLL
Trigger: CAACAAGGAGCAGGCTACTCAATGGCAAAAGGAAGA...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTACTAGACCCCATGATTaGATGACATTCCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPTRPHD*MTFLAC
Trigger: GCAAGCCAGGAATGTCATGCAATCATGGGGTCTAGT...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTGTCACTCTGCCTTCTTaGACGTGTGTTAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVVTLPS*TCVRDR
Trigger: CCTGTCCCTAACACACGTGCAAGAAGGCAGAGTGAC...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTCAGCTTCTCCATGTCTaGTTCCTTTGCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVQLLHV*FLCLQG
Trigger: GCCCTGAAGGCAAAGGAAGCAGACATGGAGAAGCTG...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATGGCCAGGAATCCTACTaGCGTCTTCTACTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VEFIFQGFCCVVCVRFPNGQESY*RLLLLG
Trigger: GCCCAACAGTAGAAGACGCCAGTAGGATTCCTGGCC...ATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGTTCCAGGCTTGTAGCTaGTGGGAAAGAACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKFQACS*WERTSS
Trigger: GCTGGAAGTTCTTTCCCACCAGCTACAAGCCTGGAA...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp AACATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATACAATGGCACAGGAGCTaGTTCTGGCACTTCATCTAC +
Preference number: 4 (lower is better)
Translates to: NMVGSMPIGLIIGIRVGIQWHRS*FWHFIY
Trigger: GTAGATGAAGTGCCAGAACCAGCTCCTGTGCCATTG...TATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGACCCCATGATTGCATaGCATTCCTGGCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSDPMIA*HSWLAV
Trigger: TACTGCAAGCCAGGAATGTCATGCAATCATGGGGTC...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp CCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACCTTGCTCACCTCCTGTaGGAGAAACACTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PIGLIIGIRVGIKSPEGNLAHLL*EKHFFL
Trigger: CAGGAAAAAGTGTTTCTCTCACAGGAGGTGAGCAAG...GTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp CGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTATGGAAAAGAGAGTTaGTTTCAGGAGTTGGATCGG +
Preference number: 4 (lower is better)
Translates to: RLYANWSYYWDKGWDKEPYGKES*FQELDR
Trigger: CCGATCCAACTCCTGAAAGCAACTCTCTTTTCCATA...GGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp CGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTCTGTTTTGAGGCTCTaGAGCTTTGCCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: RLYANWSYYWDKGWDKEPSVLRL*SFAFNF
Trigger: GAAATTGAAGGCAAAGCTGCAGAGCCTCAAAACAGA...GGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCCTGAGCCGAGAGATCTaGAGTAAGGCGACTATTTTC +
Preference number: 4 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVLSREI*SKATIF
Trigger: GAAAATAGTCGCCTTACTGCAGATCTCTCGGCTCAG...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCATTCTCCTCCAGGATGTaGCTATGGCTCAGATACTTG +
Preference number: 4 (lower is better)
Translates to: GVEFIFQGFCCVVCVRFPFSSRM*LWLRYL
Trigger: CAAGTATCTGAGCCATAGGCACATCCTGGAGGAGAA...TGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGTTGCTTTCAGGAGTTaGATCGGATTCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLVAFRS*IGFTLA
Trigger: TGCCAGCGTGAATCCGATCCAACTCCTGAAAGCAAC...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTCCAGGATGTGCCTATaGCTCAGATACTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: ETGVEWNSFFRVFAVLSVSRMCL*LRYLSI
Trigger: GATGGACAAGTATCTGAGCCATAGGCACATCCTGGA...CACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTGCGTTGAAGGATGGCTaGACTGTTCTGAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVALKDG*TVLKGS
Trigger: ACTTCCTTTCAGAACAGTTCAGCCATCCTTCAACGC...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp GAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTGCTCTGGGTAAGTTaGCACAGCAATTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: ETGVEWNSFFRVFAVLSVLLWVS*HSNSSF
Trigger: GAAGGATGAATTGCTGTGTCAACTTACCCAGAGCAA...CACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGGGCAGAATGATCTCTaGTTCAGCCTTGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSGQNDL*FSLVLL
Trigger: AAGGAGAACAAGGCTGAATCAGAGATCATTCTGCCC...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp TGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTTGTCGGGGTCTGTTCTaGGATGCTGCTGTCATTGGA +
Preference number: 4 (lower is better)
Translates to: WNSFFRVFAVLSVLGSQICRGLF*DAAVIG
Trigger: TCCAATGACAGCAGCATCTCAGAACAGACCCCGACA...AATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGGATCTTCTCGTTCTaGTTCTGTATCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKRIFSF*FCITSR
Trigger: CCTGGAAGTGATACAGAAGCAGAACGAGAAGATCCT...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGATGTGCGTTGAAGGATaGCTGAACTGTTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKMCVEG*LNCSER
Trigger: CCTTTCAGAACAGTTCAGCCATCCTTCAACGCACAT...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATAGCAAGCACAAGGCCTaGTTCAGCTTCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: VEFIFQGFCCVVCVRFPNSKHKA*FSFSMS
Trigger: AGACATGGAGAAGCTGAACCAGGCCTTGTGCTTGCT...ATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTCTGAGGTTTATGAGCTaGCCGCTCTTGTCTATTTGC +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSLRFMS*PLLSIC
Trigger: GCAAATAGACAAGAGCGGCCAGCTCATAAACCTCAG...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
3UTR CAA 72 bp GTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTaGTCTGTGTTAGGTTCCCAAATTCCTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: VEWNSFFRVFAV*SVLGSQIPGIW
Trigger: CCAAATCCCAGGAATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp CCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACATGGCTGAACTGTTCTaGAAGGAAGTTGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PIGLIIGIRVGIKSPEGNMAELF*KEVVLS
Trigger: ACTGAGAACAACTTCCTTTCAGAACAGTTCAGCCAT...GTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp TGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTCCTCACATTCTGTTTTaGGGCTCTGCAGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: WNSFFRVFAVLSVLGSQIPHILF*GSAALP
Trigger: AGGCAAAGCTGCAGAGCCTCAAAACAGAATGTGAGG...AATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp CCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACATAATTCAATTGGACTaGTGTCCAGTCCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PIGLIIGIRVGIKSPEGNIIQLD*CPVLLQ
Trigger: TTGCAGCAGGACTGGACATCAGTCCAATTGAATTAT...GTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTCAGCCTTGTTCTCCTTaGGTTTTGCCTGTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVQPCSP*VLPVRR
Trigger: TCTTCTTACAGGCAAAACTCAAGGAGAACAAGGCTG...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTATGACATTCCTGGCTTaGAGTAGAGCCTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSMTFLA*SRACLI
Trigger: GATTAGACAGGCTCTACTGCAAGCCAGGAATGTCAT...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTTTCCTTGCTGTGCCTTaGCTCCTCACATTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSFLAVP*LLTFCF
Trigger: AAAACAGAATGTGAGGAGGCAAGGCACAGCAAGGAA...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATCACAGTACTCATTTCTaGCAGGCTCTTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: VEFIFQGFCCVVCVRFPNHSTHF*QALLQV
Trigger: GACTTGGAGAAGAGCCTGGCAGAAATGAGTACTGTG...ATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp GGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCATTACAGTCCTCTAAATaGGCAGAGACTTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: GVEFIFQGFCCVVCVRFPLQSSK*AETCST
Trigger: AGTGGAACAAGTCTCTGCCCATTTAGAGGACTGTAA...TGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAATCTCCTTGCTGTCCTaGAGATGTTTAGGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLISLLS*RCLGVL
Trigger: TAAGACACCTAAACATCTTCAGGACAGCAAGGAGAT...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp GTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATGCAGTAACTCTAGCGTaGCTTTCAACTGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: VEFIFQGFCCVVCVRFPNAVTLA*LSTDSQ
Trigger: TTGAGAGTCAGTTGAAAGTCACGCTAGAGTTACTGC...ATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp AACATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATACTTCTTTTCTTCAATTaGAGCATCACGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: NMVGSMPIGLIIGIRVGILLFFN*SITFLK
Trigger: CTTCAGGAACGTGATGCTGCAATTGAAGAAAAGAAG...TATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CCA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGGCTTCCTCCAAAGTATaGAAAAGAGAGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKASSKV*KRELLS
Trigger: TGAAAGCAACTCTCTTTTCCATACTTTGGAGGAAGC...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAAAATCCACTGGAGATaGGTTGTTGCATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVKIHWR*VVASFL
Trigger: AAGGAAAGATGCAACAACTCATCTCCAGTGGATTTT...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCATCCACTGTTTCTATTaGTTCCTCCAAAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVIHCFY*FLQSME
Trigger: TTCCATACTTTGGAGGAAGCAATAGAAACAGTGGAT...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR TCA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTTTCAGTTGTTCGATTTaGCCTTTACAGTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVFSCSI*PLQSSK
Trigger: TTTAGAGGACTGTAAAGGTCAAATCGAACAACTGAA...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR GCA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAACTTCCTTCACAACCTaGTTCTTTTCTTCAATTGCA +
Preference number: 4 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLTSFTT*FFSSIA
Trigger: TGCAATTGAAGAAAAGAAGCAGGTTGTGAAGGAAGT...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp CTTCAGTGCTGGCCAGCTCAGCCCTCAGGCTGTCCACAGTGTCCCTaGGGGTCTCACACTGCAGGCTGCGCTCCCGCAGTAACTCTAGCG +
Preference number: 5 (lower is better)
Translates to: LQCWPAQPSGCPQCP*GSHTAGCAPAVTLA
Trigger: CGCTAGAGTTACTGCGGGAGCGCAGCCTGCAGTGTGAGACCCTCAGGGACACTGTGGACAGCCTGAGGGCTGAGCTGGCCAGCACTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp TTGGCTGATGCGCTGGCTGGCATGTGCACGGAAAGCCTCCAGTACTaGCTCTGCCGCAGCCTTGCCTTTAAGGGCCATTTCCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LADALAGMCTESLQY*LCRSLAFKGHFLAV
Trigger: CACAGCAAGGAAATGGCCCTTAAAGGCAAGGCTGCGGCAGAGGCAGTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGCATCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp AGATGTGAGACCCTGTTCCAGTTGGCTGATGCGCTGGCTGGCATGTaGACGGAAAGCCTCCAGTACTGCCTCTGCCGCAGCCTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: RCETLFQLADALAGM*TESLQYCLCRSLAF
Trigger: AAAGGCAAGGCTGCGGCAGAGGCAGTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGCATCAGCCAACTGGAACAGGGTCTCACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp CATCTACTGCTGCTGTCGGGGTCTGTTCTGAGATGCTGCTGTCATTaGACAGAGGGTGTTCCTGGGCTGGAGCAGAGCCTGTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: HLLLLSGSVLRCCCH*TEGVPGLEQSLCWA
Trigger: TGCCCAGCACAGGCTCTGCTCCAGCCCAGGAACACCCTCTGTCCAATGACAGCAGCATCTCAGAACAGACCCCGACAGCAGCAGTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp GCCATCAGCTGGCAGCTGGGATCTAGCTGGCCTTCCAGGGCTTCCTaGAGCACTTTAGTCTCTGTCTCTGCACGCCGAAGTGACTGTGTG +
Preference number: 5 (lower is better)
Translates to: AISWQLGSSWPSRAS*STLVSVSARRSDCV
Trigger: CACACAGTCACTTCGGCGTGCAGAGACAGAGACTAAAGTGCTCCAGGAAGCCCTGGAAGGCCAGCTAGATCCCAGCTGCCAGCTGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp AGCTGGTTCTGGCACTTCATCTACTGCTGCTGTCGGGGTCTGTTCTaGGATGCTGCTGTCATTGGACAGAGGGTGTTCCTGGGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SWFWHFIYCCCRGLF*DAAVIGQRVFLGWS
Trigger: GCTCCAGCCCAGGAACACCCTCTGTCCAATGACAGCAGCATCTCAGAACAGACCCCGACAGCAGCAGTAGATGAAGTGCCAGAACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp GTTCTGGCACTTCATCTACTGCTGCTGTCGGGGTCTGTTCTGAGATaGTGCTGTCATTGGACAGAGGGTGTTCCTGGGCTGGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: VLALHLLLLSGSVLR*CCHWTEGVPGLEQS
Trigger: GCTCTGCTCCAGCCCAGGAACACCCTCTGTCCAATGACAGCAGCATCTCAGAACAGACCCCGACAGCAGCAGTAGATGAAGTGCCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp AATTCCTGCATAGATGTGAGACCCTGTTCCAGTTGGCTGATGCGCTaGCTGGCATGTGCACGGAAAGCCTCCAGTACTGCCTCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: NSCIDVRPCSSWLMR*LACARKASSTASAA
Trigger: TGCGGCAGAGGCAGTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGCATCAGCCAACTGGAACAGGGTCTCACATCTATGCAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp CAAGGAGAGCTGTCAGTCTGTGTACTACTGTCTCGAGCTTCCCGGTaGGGGACAGTCAACTGGCTCTTCCAGGCTTGTAGCTGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: QGELSVCVLLSRASR*GTVNWLFQACSWWE
Trigger: TTCCCACCAGCTACAAGCCTGGAAGAGCCAGTTGACTGTCCCTCACCGGGAAGCTCGAGACAGTAGTACACAGACTGACAGCTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp CAGGGCTTCCTGGAGCACTTTAGTCTCTGTCTCTGCACGCCGAAGTaGCTGTGTGAGCTGGGTCACCTCCTCTCTGAGGTTTATGAGCTG +
Preference number: 5 (lower is better)
Translates to: QGFLEHFSLCLCTPK*LCELGHLLSEVYEL
Trigger: CAGCTCATAAACCTCAGAGAGGAGGTGACCCAGCTCACACAGTCACTTCGGCGTGCAGAGACAGAGACTAAAGTGCTCCAGGAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp TCCTGGATCCAGTTAGTAGCCATCAGCTGGCAGCTGGGATCTAGCTaGCCTTCCAGGGCTTCCTGGAGCACTTTAGTCTCTGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SWIQLVAISWQLGSS*PSRASWSTLVSVSA
Trigger: TGCAGAGACAGAGACTAAAGTGCTCCAGGAAGCCCTGGAAGGCCAGCTAGATCCCAGCTGCCAGCTGATGGCTACTAACTGGATCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp CCTATCAGTTGGGTCTGTGCCTCCTGTAGAAGGCCTCTGAATTCCTaGATAGATGTGAGACCCTGTTCCAGTTGGCTGATGCGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PISWVCASCRRPLNS*IDVRPCSSWLMRWL
Trigger: CAGCCAGCGCATCAGCCAACTGGAACAGGGTCTCACATCTATGCAGGAATTCAGAGGCCTTCTACAGGAGGCACAGACCCAACTGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp AGAAGGCCTCTGAATTCCTGCATAGATGTGAGACCCTGTTCCAGTTaGCTGATGCGCTGGCTGGCATGTGCACGGAAAGCCTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: RRPLNSCIDVRPCSS*LMRWLACARKASST
Trigger: AGTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGCATCAGCCAACTGGAACAGGGTCTCACATCTATGCAGGAATTCAGAGGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp ACTTCCAGGAGCTCCTTCTCATTCTTGCGGAGCAAGCACAAGGCCTaGTTCAGCTTCTCCATGTCTGCTTCCTTTGCCTTCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TSRSSFSFLRSKHKA*FSFSMSASFAFRAS
Trigger: GGAAGCCCTGAAGGCAAAGGAAGCAGACATGGAGAAGCTGAACCAGGCCTTGTGCTTGCTCCGCAAGAATGAGAAGGAGCTCCTGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp AGCACTTTAGTCTCTGTCTCTGCACGCCGAAGTGACTGTGTGAGCTaGGTCACCTCCTCTCTGAGGTTTATGAGCTGGCCGCTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: STLVSVSARRSDCVS*VTSSLRFMSWPLLS
Trigger: AGACAAGAGCGGCCAGCTCATAAACCTCAGAGAGGAGGTGACCCAGCTCACACAGTCACTTCGGCGTGCAGAGACAGAGACTAAAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp CAGCACTCCAACTTTGGCGTCTGGAGCAGCTGGAACTACAGGTGCACACCACTGTCCTCACATTCTGTTTaGAGGCTCTGCAGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: QHSNFGVWSSWNYRCTPLSSHSV*RLCSFA
Trigger: GGCAAAGCTGCAGAGCCTCAAAACAGAATGTGAGGA...CAGTGGTGTGCACCTGTAGTTCCAGCTGCTCCAGACGCCAAAGTTGGAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp TGTGAGAGAAACACTTTTTCCTGGATCCAGTTAGTAGCCATCAGCTaGCAGCTGGGATCTAGCTGGCCTTCCAGGGCTTCCTGGAGCACT +
Preference number: 5 (lower is better)
Translates to: CERNTFSWIQLVAIS*QLGSSWPSRASWST
Trigger: AGTGCTCCAGGAAGCCCTGGAAGGCCAGCTAGATCCCAGCTGCCAGCTGATGGCTACTAACTGGATCCAGGAAAAAGTGTTTCTCTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp CAGATTTCCCTCTGCAGGACCCCAGTGGCCTCCTCTTTAGACTCTTaGAGCAGGGAACACAGGCTCTTAAGCTCTTGTAACACAGTACTC +
Preference number: 5 (lower is better)
Translates to: QISLCRTPVASSLDS*SREHRLLSSCNTVL
Trigger: GAGTACTGTGTTACAAGAGCTTAAGAGCCTGTGTTCCCTGCTGCAAGAGTCTAAAGAGGAGGCCACTGGGGTCCTGCAGAGGGAAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp ATGAGCTGGCCGCTCTTGTCTATTTGCCCCAGGATCTTCTCGTTCTaGTTCTGTATCACTTCCAGGAGCTCCTTCTCATTCTTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: MSWPLLSICPRIFSF*FCITSRSSFSFLRS
Trigger: GCTCCGCAAGAATGAGAAGGAGCTCCTGGAAGTGATACAGAAGCAGAACGAGAAGATCCTGGGGCAAATAGACAAGAGCGGCCAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp GTCACCTCCTCTCTGAGGTTTATGAGCTGGCCGCTCTTGTCTATTTaGCCCAGGATCTTCTCGTTCTGCTTCTGTATCACTTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VTSSLRFMSWPLLSI*PRIFSFCFCITSRS
Trigger: GCTCCTGGAAGTGATACAGAAGCAGAACGAGAAGATCCTGGGGCAAATAGACAAGAGCGGCCAGCTCATAAACCTCAGAGAGGAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGGCGTCTTCTACTGTaGGGCCTGGGGCTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVWRLLL*GLGLPG
Trigger: CCCGGGAAGCCCCAGGCCCAACAGTAGAAGACGCCA...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp GCTCTTCTCCAAGTCTGGGGTCTCTGTAGGCTGAAAGGAAGCCATTaGGGCTACTCGGGTGAAAGCACTCTTAACACTTCCAAGCAATGG +
Preference number: 5 (lower is better)
Translates to: ALLQVWGLCRLKGSH*GYSGESTLNTSKQW
Trigger: CCATTGCTTGGAAGTGTTAAGAGTGCTTTCACCCGAGTAGCCTCAATGGCTTCCTTTCAGCCTACAGAGACCCCAGACTTGGAGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp AAACCAGGGTTTTTGACCGCTGAGACTCCTGACTCACTGTCACTCTaGCTTCTTGCACGTGTGTTAGGGACAGGTGAAGCAAGGACAACA +
Preference number: 5 (lower is better)
Translates to: KPGFLTAETPDSLSL*LLARVLGTGEARTT
Trigger: TGTTGTCCTTGCTTCACCTGTCCCTAACACACGTGCAAGAAGGCAGAGTGACAGTGAGTCAGGAGTCTCAGCGGTCAAAAACCCTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp ACAGTCTCCCTCAGGTCCTGGACCTCCTTAGCCAACACAGCCTGCTaGTGTAGCAGTTCTGCTTGTATGTGTTTCAGTTCCATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TVSLRSWTSLANTAC*CSSSACMCFSSISS
Trigger: GGAAGAAATGGAACTGAAACACATACAAGCAGAACTGCTACAGCAGCAGGCTGTGTTGGCTAAGGAGGTCCAGGACCTGAGGGAGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp TCCACAGTCTCCCTCAGGTCCTGGACCTCCTTAGCCAACACAGCCTaGTGCTGTAGCAGTTCTGCTTGTATGTGTTTCAGTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: STVSLRSWTSLANTA*CCSSSACMCFSSIS
Trigger: AGAAATGGAACTGAAACACATACAAGCAGAACTGCTACAGCAGCAGGCTGTGTTGGCTAAGGAGGTCCAGGACCTGAGGGAGACTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp ATAACCCTCAGCTTGCTCACCTCCTGTGAGAGAAACACTTTTTCCTaGATCCAGTTAGTAGCCATCAGCTGGCAGCTGGGATCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: ITLSLLTSCERNTFS*IQLVAISWQLGSSW
Trigger: CCAGCTAGATCCCAGCTGCCAGCTGATGGCTACTAACTGGATCCAGGAAAAAGTGTTTCTCTCACAGGAGGTGAGCAAGCTGAGGGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp CTTCAATTTCTTCAGCACACGAGAACAGGAGGAAACCAGGGTTTTTaGCCGCTGAGACTCCTGACTCACTGTCACTCTGCCTTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: LQFLQHTRTGGNQGF*PLRLLTHCHSAFLH
Trigger: GTGCAAGAAGGCAGAGTGACAGTGAGTCAGGAGTCTCAGCGGTCAAAAACCCTGGTTTCCTCCTGTTCTCGTGTGCTGAAGAAATTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp TCCTTCACAACCTGCTTCTTTTCTTCAATTGCAGCATCACGTTCCTaGAGGGCCTGCCGGCTCTTGGCTGTGAGTTTCTTGGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: SFTTCFFSSIAASRS*RACRLLAVSFLVSS
Trigger: AGAACTCACCAAGAAACTCACAGCCAAGAGCCGGCAGGCCCTTCAGGAACGTGATGCTGCAATTGAAGAAAAGAAGCAGGTTGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGGGCCTGCCGGCTCTaGGCTGTGAGTTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKRACRL*AVSFLV
Trigger: CACCAAGAAACTCACAGCCAAGAGCCGGCAGGCCCT...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 90 bp ACATTCCTGGCTTGCAGTAGAGCCTGTCTAATCTCCTTGCTGTCCTaGAGATGTTTAGGTGTCTTAGTGACCCCACAAGGAGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TFLACSRACLISLLS*RCLGVLVTPQGELS
Trigger: TGACAGCTCTCCTTGTGGGGTCACTAAGACACCTAAACATCTTCAGGACAGCAAGGAGATTAGACAGGCTCTACTGCAAGCCAGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp AACTCTGTGTCAGAGCGCCGAAGATTCTCCTCCAGGATGTGCCTATaGCTCAGATACTTGTCCATCAGCTGTTCCTTCTCAGTTTTCATC +
Preference number: 5 (lower is better)
Translates to: NSVSERRRFSSRMCL*LRYLSISCSFSVFI
Trigger: GATGAAAACTGAGAAGGAACAGCTGATGGACAAGTATCTGAGCCATAGGCACATCCTGGAGGAGAATCTTCGGCGCTCTGACACAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp AAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTAGCTGGCTTCCCCTTTaGGGGCGAAGGCGACAAACC +
Preference number: 5 (lower is better)
Translates to: KETGVEWNSFFRVFAVLSSWLPL*GRRRQT
Trigger: GGTTTGTCGCCTTCGCCCCAAAAGGGGAAGCCAGCT...AGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp CTGACTCTCTGTGCTAGTCAGAATCTGCAGCTGAGCCGAGAGATCTaGAGTAAGGCGACTATTTTCCAACTTCAGTTGTTCGATTTGACC +
Preference number: 5 (lower is better)
Translates to: LTLCASQNLQLSREI*SKATIFQLQLFDLT
Trigger: GGTCAAATCGAACAACTGAAGTTGGAAAATAGTCGCCTTACTGCAGATCTCTCGGCTCAGCTGCAGATTCTGACTAGCACAGAGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp TTCTTTAACTCTGTGTCAGAGCGCCGAAGATTCTCCTCCAGGATGTaGCTATGGCTCAGATACTTGTCCATCAGCTGTTCCTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: FFNSVSERRRFSSRM*LWLRYLSISCSFSV
Trigger: AACTGAGAAGGAACAGCTGATGGACAAGTATCTGAGCCATAGGCACATCCTGGAGGAGAATCTTCGGCGCTCTGACACAGAGTTAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp GAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGATTTGCAGCAGGTGCTaGGTCTCCCAATTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: ETGVEWNSFFRVFAVLSVICSRC*VSQFGL
Trigger: GAGGCCGAATTGGGAGACCAAGCACCTGCTGCAAAT...CACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp TGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTGAGACCCTGTTCCAGTaGGCTGATGCGCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WNSFFRVFAVLSVLGSQIETLFQ*ADALAG
Trigger: GCCAGCCAGCGCATCAGCCAACTGGAACAGGGTCTC...AATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp GTATGGAAAAGAGAGTTGCTTTCAGGAGTTGGATCGGATTCACGCTaGCAAGCTTCTATGTGCGTTGAAGGATGGCTGAACTGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: VWKRELLSGVGSDSR*QASMCVEGWLNCSE
Trigger: TTCAGAACAGTTCAGCCATCCTTCAACGCACATAGAAGCTTGCCAGCGTGAATCCGATCCAACTCCTGAAAGCAACTCTCTTTTCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTGAGATGCTGCTGTCATaGGACAGAGGGTGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVEMLLS*DRGCSW
Trigger: CCAGGAACACCCTCTGTCCAATGACAGCAGCATCTC...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp CCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACCTCCTCTTTAGACTCTaGCAGCAGGGAACACAGGCT +
Preference number: 5 (lower is better)
Translates to: PIGLIIGIRVGIKSPEGNLLFRL*QQGTQA
Trigger: AGCCTGTGTTCCCTGCTGCAAGAGTCTAAAGAGGAG...GTTTCCTTCAGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 90 bp TCCACGACAAAGTCATCCACTGTTTCTATTGCTTCCTCCAAAGTATaGAAAAGAGAGTTGCTTTCAGGAGTTGGATCGGATTCACGCTGG +
Preference number: 5 (lower is better)
Translates to: STTKSSTVSIASSKV*KRELLSGVGSDSRW
Trigger: CCAGCGTGAATCCGATCCAACTCCTGAAAGCAACTCTCTTTTCCATACTTTGGAGGAAGCAATAGAAACAGTGGATGACTTTGTCGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp GGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCTACTGGAGATGAGTTGTaGCATCTTTCCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GSMPIGLIIGIRVGIKSPTGDEL*HLSFSS
Trigger: GGAGCTGAAGGAAAGATGCAACAACTCATCTCCAGT...AGGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGCCATCTCCACTAGACTaGATGTCAGGTACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKPSPLD*MSGTRV
Trigger: CACCCTTGTACCTGACATCAAGTCTAGTGGAGATGG...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGCTGAGCCAGCTCCTTTaGTTCTGTGTGAAGCCCTAT +
Preference number: 5 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKLSQLL*FCVKPY
Trigger: ATAGGGCTTCACACAGAACAAAAGGAGCTGGCTCAG...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp CGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGAGCCCATCTCTGATTCAGCCTaGTTCTCCTTGAGTTTTGCC +
Preference number: 5 (lower is better)
Translates to: RLYANWSYYWDKGWDKEPISDSA*FSLSFA
Trigger: GGCAAAACTCAAGGAGAACAAGGCTGAATCAGAGAT...GGGCTCTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp GAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTGGCTGTGAGTTTCTaGGTGAGTTCTCGAGACCAA +
Preference number: 5 (lower is better)
Translates to: ETGVEWNSFFRVFAVLSVLAVSF*VSSRDQ
Trigger: TTGGTCTCGAGAACTCACCAAGAAACTCACAGCCAA...CACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCCTATGGCTCAGATACTaGTCCATCAGCTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVLWLRY*SISCSF
Trigger: GAAGGAACAGCTGATGGACAAGTATCTGAGCCATAG...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 90 bp ACTATCATCTCTTGGGTCCACGACAAAGTCATCCACTGTTTCTATTaGTTCCTCCAAAGTATGGAAAAGAGAGTTGCTTTCAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: TIISWVHDKVIHCFY*FLQSMEKRVAFRSW
Trigger: CCAACTCCTGAAAGCAACTCTCTTTTCCATACTTTGGAGGAAGCAATAGAAACAGTGGATGACTTTGTCGTGGACCCAAGAGATGATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTATCCACTGGAGATGAGTaGTTGCATCTTTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLSTGDE*LHLSFS
Trigger: GCTGAAGGAAAGATGCAACAACTCATCTCCAGTGGA...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCGTATGGAAAAGAGAGTaGCTTTCAGGAGTTGGATCG +
Preference number: 5 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVVWKRE*LSGVGS
Trigger: CGATCCAACTCCTGAAAGCAACTCTCTTTTCCATAC...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp AACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTTTTCCTTGCTGTGCCTaGCCTCCTCACATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: NWSGVEFIFQGFCCVVCVFPCCA*PPHILF
Trigger: AAACAGAATGTGAGGAGGCAAGGCACAGCAAGGAAA...AACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp ATAAGGGTTGGGATAAAGAGCCCTGAAGGAAACTGGAGTGGAGTGGAATTCATTCTCCCGGTGAGCAACTaGACTTTCTTCATCTATAAA +
Preference number: 5 (lower is better)
Translates to: IRVGIKSPEGNWSGVEFILPVSN*TFFIYK
Trigger: TTTATAGATGAAGAAAGTCAAGTTGCTCACCGGGAG...AATGAATTCCACTCCACTCCAGTTTCCTTCAGGGCTCTTTATCCCAACCCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp ATGGTCGGCTCTATGCCAATTGGTCTTATTATTGGGATAAGGGTTGGGATAAAGCATCCACTGTTTCTATaGCTTCCTCCAAAGTATGGA +
Preference number: 5 (lower is better)
Translates to: MVGSMPIGLIIGIRVGIKHPLFL*LPPKYG
Trigger: TCCATACTTTGGAGGAAGCAATAGAAACAGTGGATG...CTTTATCCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp ACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGTTGCTCTGGGTAAGTaGACACAGCAATTCATCCTT +
Preference number: 5 (lower is better)
Translates to: TGVEWNSFFRVFAVLSVLVALGK*TQQFIL
Trigger: AAGGATGAATTGCTGTGTCAACTTACCCAGAGCAAC...TAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp TGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTAACATAACCCTCAGCTaGCTCACCTCCTGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: WNSFFRVFAVLSVLGSQINITLS*LTSCER
Trigger: TCTCTCACAGGAGGTGAGCAAGCTGAGGGTTATGTT...AATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp GAAGGAAACTGGAGTGGAGTGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCAATCCTTGTAACTCCTaGCAACTCTTCATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: EGNWSGVEFIFQGFCCVVNPCNS*QLFIVS
Trigger: AGAGACTATGAAGAGTTGCAAGGAGTTACAAGGATT...GACAACACAGCAAAAACCCTGAAAAATGAATTCCACTCCACTCCAGTTTCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS-3UTR CAA 90 bp TGGAATTCATTTTTCAGGGTTTTTGCTGTGTTGTCTGTGTTAGGTTCCCAAATTGCTTCTTTTCTTCAATaGCAGCATCACGTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: WNSFFRVFAVLSVLGSQIASFLQ*QHHVPE
Trigger: TTCAGGAACGTGATGCTGCAATTGAAGAAAAGAAGC...AATTTGGGAACCTAACACAGACAACACAGCAAAAACCCTGAAAAATGAATTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 72 bp TGGCCAGCTCAGCCCTCAGGCTGTCCACAGTGTCCCTaGGGGTCTCACACTGCAGGCTGCGCTCCCGCAGTA +
Preference number: 6 (lower is better)
Translates to: WPAQPSGCPQCP*GSHTAGCAPAV
Trigger: TACTGCGGGAGCGCAGCCTGCAGTGTGAGACCCTCAGGGACACTGTGGACAGCCTGAGGGCTGAGCTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp ACCCTGTTCCAGTTGGCTGATGCGCTGGCTGGCATGTaGACGGAAAGCCTCCAGTACTGCCTCTGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: TLFQLADALAGM*TESLQYCLCRS
Trigger: GCTGCGGCAGAGGCAGTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGCATCAGCCAACTGGAACAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp GCGCTGGCTGGCATGTGCACGGAAAGCCTCCAGTACTaGCTCTGCCGCAGCCTTGCCTTTAAGGGCCATTTC +
Preference number: 6 (lower is better)
Translates to: ALAGMCTESLQY*LCRSLAFKGHF
Trigger: GAAATGGCCCTTAAAGGCAAGGCTGCGGCAGAGGCAGTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp CTCTTCCAAGTCGTGTCGGGACAAGGTAGCCAGATCTaGAGGACGGCAGCCCAAGAGGAGGCGCTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: LFQVVSGQGSQI*RTAAQEEALCL
Trigger: GAGACAGAGCGCCTCCTCTTGGGCTGCCGTCCTCCAGATCTGGCTACCTTGTCCCGACACGACTTGGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp CTGCTGTCGGGGTCTGTTCTGAGATGCTGCTGTCATTaGACAGAGGGTGTTCCTGGGCTGGAGCAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: LLSGSVLRCCCH*TEGVPGLEQSL
Trigger: CAGGCTCTGCTCCAGCCCAGGAACACCCTCTGTCCAATGACAGCAGCATCTCAGAACAGACCCCGACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 72 bp CACGTGGCGAGGGGTGTGTTGCCAACGGCAGCATCCTaGAGCACAGAAGAAAAGGATAAGCTCTGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: HVARGVLPTAAS*STEEKDKLWRR
Trigger: CCTCCGCCAGAGCTTATCCTTTTCTTCTGTGCTTCAGGATGCTGCCGTTGGCAACACACCCCTCGCCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp GCTGGCATGTGCACGGAAAGCCTCCAGTACTGCCTCTaGCGCAGCCTTGCCTTTAAGGGCCATTTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: AGMCTESLQYCL*RSLAFKGHFLA
Trigger: AGCAAGGAAATGGCCCTTAAAGGCAAGGCTGCGGCAGAGGCAGTACTGGAGGCTTTCCGTGCACATGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp AAGGGTGAGACGGCTTCTGCATTTGCAGCAGGTGCTTaGTCTCCCAATTCGGCCTCCTCAGGGAATGTGGGG +
Preference number: 6 (lower is better)
Translates to: KGETASAFAAGA*SPNSASSGNVG
Trigger: CCCCACATTCCCTGAGGAGGCCGAATTGGGAGACCAAGCACCTGCTGCAAATGCAGAAGCCGTCTCACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp ACATCCAAGTCTCTGACTCAAGGCCAGGAATCCTACTaGCGTCTTCTACTGTTGGGCCTGGGGCTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: TSKSLTQGQESY*RLLLLGLGLPG
Trigger: CCCGGGAAGCCCCAGGCCCAACAGTAGAAGACGCCAGTAGGATTCCTGGCCTTGAGTCAGAGACTTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp TCTCTAGGGCCTGTTTCTCATGCTTTGCTTCAGTGCTaGCCAGCTCAGCCCTCAGGCTGTCCACAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: SLGPVSHALLQC*PAQPSGCPQCP
Trigger: GGGACACTGTGGACAGCCTGAGGGCTGAGCTGGCCAGCACTGAAGCAAAGCATGAGAAACAGGCCCTAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp GTCTCTGTCTCTGCACGCCGAAGTGACTGTGTGAGCTaGGTCACCTCCTCTCTGAGGTTTATGAGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: VSVSARRSDCVS*VTSSLRFMSWP
Trigger: CGGCCAGCTCATAAACCTCAGAGAGGAGGTGACCCAGCTCACACAGTCACTTCGGCGTGCAGAGACAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp AGGAAGTGCCCACAGAACACGTGGCGAGGGGTGTGTTaGCAACGGCAGCATCCTGAAGCACAGAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: RKCPQNTWRGVC*QRQHPEAQKKR
Trigger: CCTTTTCTTCTGTGCTTCAGGATGCTGCCGTTGGCAACACACCCCTCGCCACGTGTTCTGTGGGCACTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp GTTGCATCTTTCCTTCAGCTCCAGCCTGCACAGGTATaGGGTCAGCGCGGAGATCATAGAGGGACCTTTCCC +
Preference number: 6 (lower is better)
Translates to: VASFLQLQPAQV*GQRGDHRGTFP
Trigger: GGGAAAGGTCCCTCTATGATCTCCGCGCTGACCCCATACCTGTGCAGGCTGGAGCTGAAGGAAAGATGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp ATAGATGTGAGACCCTGTTCCAGTTGGCTGATGCGCTaGCTGGCATGTGCACGGAAAGCCTCCAGTACTGCC +
Preference number: 6 (lower is better)
Translates to: IDVRPCSSWLMR*LACARKASSTA
Trigger: GGCAGTACTGGAGGCTTTCCGTGCACATGCCAGCCAGCGCATCAGCCAACTGGAACAGGGTCTCACATCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 72 bp CTGTCAGTCTGTGTACTACTGTCTCGAGCTTCCCGGTaGGGGACAGTCAACTGGCTCTTCCAGGCTTGTAGC +
Preference number: 6 (lower is better)
Translates to: LSVCVLLSRASR*GTVNWLFQACS
Trigger: GCTACAAGCCTGGAAGAGCCAGTTGACTGTCCCTCACCGGGAAGCTCGAGACAGTAGTACACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp CTTCATCTACTGCTGCTGTCGGGGTCTGTTCTGAGATaGTGCTGTCATTGGACAGAGGGTGTTCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: LHLLLLSGSVLR*CCHWTEGVPGL
Trigger: CAGCCCAGGAACACCCTCTGTCCAATGACAGCAGCATCTCAGAACAGACCCCGACAGCAGCAGTAGATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp GTGAGCTGGGTCACCTCCTCTCTGAGGTTTATGAGCTaGCCGCTCTTGTCTATTTGCCCCAGGATCTTCTCG +
Preference number: 6 (lower is better)
Translates to: VSWVTSSLRFMS*PLLSICPRIFS
Trigger: CGAGAAGATCCTGGGGCAAATAGACAAGAGCGGCCAGCTCATAAACCTCAGAGAGGAGGTGACCCAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp CAGTTAGTAGCCATCAGCTGGCAGCTGGGATCTAGCTaGCCTTCCAGGGCTTCCTGGAGCACTTTAGTCTCT +
Preference number: 6 (lower is better)
Translates to: QLVAISWQLGSS*PSRASWSTLVS
Trigger: AGAGACTAAAGTGCTCCAGGAAGCCCTGGAAGGCCAGCTAGATCCCAGCTGCCAGCTGATGGCTACTAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp CTTGAGAATGCTGGTGTGTCTTCTCTAGGGCCTGTTTCTCATGCTTaGCTTCAGTGCTGGCCAGCTCAGCCCTCAGGCTGTCCACAGTGT +
Preference number: 6 (lower is better)
Translates to: LENAGVSSLGPVSHA*LQCWPAQPSGCPQC
Trigger: ACACTGTGGACAGCCTGAGGGCTGAGCTGGCCAGCACTGAAGCAAAGCATGAGAAACAGGCCCTAGAGAAGACACACCAGCATTCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 72 bp CTTCAGCACACGAGAACAGGAGGAAACCAGGGTTTTTaGCCGCTGAGACTCCTGACTCACTGTCACTCTGCC +
Preference number: 6 (lower is better)
Translates to: LQHTRTGGNQGF*PLRLLTHCHSA
Trigger: GGCAGAGTGACAGTGAGTCAGGAGTCTCAGCGGTCAAAAACCCTGGTTTCCTCCTGTTCTCGTGTGCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp GAGCAAGCACAAGGCCTGGTTCAGCTTCTCCATGTCTaGTTCCTTTGCCTTCAGGGCTTCCTGATGCTCTTC +
Preference number: 6 (lower is better)
Translates to: EQAQGLVQLLHV*FLCLQGFLMLF
Trigger: GAAGAGCATCAGGAAGCCCTGAAGGCAAAGGAAGCAGACATGGAGAAGCTGAACCAGGCCTTGTGCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp TTGATGTCAGGTACAAGGGTGAGACGGCTTCTGCATTaGCAGCAGGTGCTTGGTCTCCCAATTCGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LMSGTRVRRLLH*QQVLGLPIRPP
Trigger: AGGAGGCCGAATTGGGAGACCAAGCACCTGCTGCAAATGCAGAAGCCGTCTCACCCTTGTACCTGACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp CTCAGGTCCTGGACCTCCTTAGCCAACACAGCCTGCTaGTGTAGCAGTTCTGCTTGTATGTGTTTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: LRSWTSLANTAC*CSSSACMCFSS
Trigger: GGAACTGAAACACATACAAGCAGAACTGCTACAGCAGCAGGCTGTGTTGGCTAAGGAGGTCCAGGACCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp TCCCTCAGGTCCTGGACCTCCTTAGCCAACACAGCCTaGTGCTGTAGCAGTTCTGCTTGTATGTGTTTCAGT +
Preference number: 6 (lower is better)
Translates to: SLRSWTSLANTA*CCSSSACMCFS
Trigger: ACTGAAACACATACAAGCAGAACTGCTACAGCAGCAGGCTGTGTTGGCTAAGGAGGTCCAGGACCTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp TCTGTGTCAGAGCGCCGAAGATTCTCCTCCAGGATGTaGCTATGGCTCAGATACTTGTCCATCAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: SVSERRRFSSRM*LWLRYLSISCS
Trigger: GGAACAGCTGATGGACAAGTATCTGAGCCATAGGCACATCCTGGAGGAGAATCTTCGGCGCTCTGACACAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp CTTAACACTTCCAAGCAATGGCACAGGAGCTGGTTCTaGCACTTCATCTACTGCTGCTGTCGGGGTCTGTTC +
Preference number: 6 (lower is better)
Translates to: LNTSKQWHRSWF*HFIYCCCRGLF
Trigger: GAACAGACCCCGACAGCAGCAGTAGATGAAGTGCCAGAACCAGCTCCTGTGCCATTGCTTGGAAGTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp AGCTCCTTCTCATTCTTGCGGAGCAAGCACAAGGCCTaGTTCAGCTTCTCCATGTCTGCTTCCTTTGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSFSFLRSKHKA*FSFSMSASFAF
Trigger: GAAGGCAAAGGAAGCAGACATGGAGAAGCTGAACCAGGCCTTGTGCTTGCTCCGCAAGAATGAGAAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp TCTTCAGCACACGAGAACAGGAGGAAACCAGGGTTTTaGACCGCTGAGACTCCTGACTCACTGTCACTCTGC +
Preference number: 6 (lower is better)
Translates to: SSAHENRRKPGF*TAETPDSLSLC
Trigger: GCAGAGTGACAGTGAGTCAGGAGTCTCAGCGGTCAAAAACCCTGGTTTCCTCCTGTTCTCGTGTGCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp CCATTGAGTAGCCTGCTCCTTGTTGCTCTGGGTAAGTaGACACAGCAATTCATCCTTCACGGCCAGGTCCTG +
Preference number: 6 (lower is better)
Translates to: PLSSLLLVALGK*TQQFILHGQVL
Trigger: CAGGACCTGGCCGTGAAGGATGAATTGCTGTGTCAACTTACCCAGAGCAACAAGGAGCAGGCTACTCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp GTCACCTCCTCTCTGAGGTTTATGAGCTGGCCGCTCTaGTCTATTTGCCCCAGGATCTTCTCGTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: VTSSLRFMSWPL*SICPRIFSFCF
Trigger: GAAGCAGAACGAGAAGATCCTGGGGCAAATAGACAAGAGCGGCCAGCTCATAAACCTCAGAGAGGAGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp TTCCTTTTGCCATTGAGTAGCCTGCTCCTTGTTGCTCTGGGTAAGTaGACACAGCAATTCATCCTTCACGGCCAGGTCCTGGACACAGCG +
Preference number: 6 (lower is better)
Translates to: FLLPLSSLLLVALGK*TQQFILHGQVLDTA
Trigger: CGCTGTGTCCAGGACCTGGCCGTGAAGGATGAATTGCTGTGTCAACTTACCCAGAGCAACAAGGAGCAGGCTACTCAATGGCAAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GCTGGAGCAGAGCCTGTGCTGGGCAGAATGATCTCTGATTCAGCCTaGTTCTCCTTGAGTTTTGCCTGTAAGAAGAGGGTGAGACTCTGC +
Preference number: 6 (lower is better)
Translates to: AGAEPVLGRMISDSA*FSLSFACKKRVRLC
Trigger: GCAGAGTCTCACCCTCTTCTTACAGGCAAAACTCAAGGAGAACAAGGCTGAATCAGAGATCATTCTGCCCAGCACAGGCTCTGCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GGTCACCTCCTCTCTGAGGTTTATGAGCTGGCCGCTCTTGTCTATTaGCCCCAGGATCTTCTCGTTCTGCTTCTGTATCACTTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: GHLLSEVYELAALVY*PQDLLVLLLYHFQE
Trigger: CTCCTGGAAGTGATACAGAAGCAGAACGAGAAGATCCTGGGGCAAATAGACAAGAGCGGCCAGCTCATAAACCTCAGAGAGGAGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GTGAGCTGGGTCACCTCCTCTCTGAGGTTTATGAGCTGGCCGCTCTaGTCTATTTGCCCCAGGATCTTCTCGTTCTGCTTCTGTATCACT +
Preference number: 6 (lower is better)
Translates to: VSWVTSSLRFMSWPL*SICPRIFSFCFCIT
Trigger: AGTGATACAGAAGCAGAACGAGAAGATCCTGGGGCAAATAGACAAGAGCGGCCAGCTCATAAACCTCAGAGAGGAGGTGACCCAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GAGCCTGTGCTGGGCAGAATGATCTCTGATTCAGCCTTGTTCTCCTaGAGTTTTGCCTGTAAGAAGAGGGTGAGACTCTGCAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: EPVLGRMISDSALFS*SFACKKRVRLCSCS
Trigger: TGAGCAGCTGCAGAGTCTCACCCTCTTCTTACAGGCAAAACTCAAGGAGAACAAGGCTGAATCAGAGATCATTCTGCCCAGCACAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp AGCTTGCTCACCTCCTGTGAGAGAAACACTTTTTCCTaGATCCAGTTAGTAGCCATCAGCTGGCAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: SLLTSCERNTFS*IQLVAISWQLG
Trigger: TCCCAGCTGCCAGCTGATGGCTACTAACTGGATCCAGGAAAAAGTGTTTCTCTCACAGGAGGTGAGCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp CCTTCAATTTCTTCAGCACACGAGAACAGGAGGAAACCAGGGTTTTaGACCGCTGAGACTCCTGACTCACTGTCACTCTGCCTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: PSISSAHENRRKPGF*TAETPDSLSLCLLA
Trigger: TGCAAGAAGGCAGAGTGACAGTGAGTCAGGAGTCTCAGCGGTCAAAAACCCTGGTTTCCTCCTGTTCTCGTGTGCTGAAGAAATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp CCGCTCTTGTCTATTTGCCCCAGGATCTTCTCGTTCTaGTTCTGTATCACTTCCAGGAGCTCCTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: PLLSICPRIFSF*FCITSRSSFSF
Trigger: GAATGAGAAGGAGCTCCTGGAAGTGATACAGAAGCAGAACGAGAAGATCCTGGGGCAAATAGACAAGAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp TACTCGGGTGAAAGCACTCTTAACACTTCCAAGCAATaGCACAGGAGCTGGTTCTGGCACTTCATCTACTGC +
Preference number: 6 (lower is better)
Translates to: YSGESTLNTSKQ*HRSWFWHFIYC
Trigger: GCAGTAGATGAAGTGCCAGAACCAGCTCCTGTGCCATTGCTTGGAAGTGTTAAGAGTGCTTTCACCCGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp GAGCCTGTGCTGGGCAGAATGATCTCTGATTCAGCCTaGTTCTCCTTGAGTTTTGCCTGTAAGAAGAGGGTG +
Preference number: 6 (lower is better)
Translates to: EPVLGRMISDSA*FSLSFACKKRV
Trigger: CACCCTCTTCTTACAGGCAAAACTCAAGGAGAACAAGGCTGAATCAGAGATCATTCTGCCCAGCACAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp CTCTCTGAGGTTTATGAGCTGGCCGCTCTTGTCTATTaGCCCCAGGATCTTCTCGTTCTGCTTCTGTATCAC +
Preference number: 6 (lower is better)
Translates to: LSEVYELAALVY*PQDLLVLLLYH
Trigger: GTGATACAGAAGCAGAACGAGAAGATCCTGGGGCAAATAGACAAGAGCGGCCAGCTCATAAACCTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GAGCGCCGAAGATTCTCCTCCAGGATGTGCCTATGGCTCAGATACTaGTCCATCAGCTGTTCCTTCTCAGTTTTCATCTCCAGGAACATA +
Preference number: 6 (lower is better)
Translates to: ERRRFSSRMCLWLRY*SISCSFSVFISRNI
Trigger: TATGTTCCTGGAGATGAAAACTGAGAAGGAACAGCTGATGGACAAGTATCTGAGCCATAGGCACATCCTGGAGGAGAATCTTCGGCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS TCA 72 bp CTCCAGGAACATAACCCTCAGCTTGCTCACCTCCTGTaGGAGAAACACTTTTTCCTGGATCCAGTTAGTAGC +
Preference number: 6 (lower is better)
Translates to: LQEHNPQLAHLL*EKHFFLDPVSS
Trigger: GCTACTAACTGGATCCAGGAAAAAGTGTTTCTCTCACAGGAGGTGAGCAAGCTGAGGGTTATGTTCCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp CCTCCAAAGTATGGAAAAGAGAGTTGCTTTCAGGAGTaGGATCGGATTCACGCTGGCAAGCTTCTATGTGCG +
Preference number: 6 (lower is better)
Translates to: PPKYGKESCFQE*DRIHAGKLLCA
Trigger: CGCACATAGAAGCTTGCCAGCGTGAATCCGATCCAACTCCTGAAAGCAACTCTCTTTTCCATACTTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp CTGGGCAGAATGATCTCTGATTCAGCCTTGTTCTCCTaGAGTTTTGCCTGTAAGAAGAGGGTGAGACTCTGC +
Preference number: 6 (lower is better)
Translates to: LGRMISDSALFS*SFACKKRVRLC
Trigger: GCAGAGTCTCACCCTCTTCTTACAGGCAAAACTCAAGGAGAACAAGGCTGAATCAGAGATCATTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS GCA 72 bp TGTGCTAGTCAGAATCTGCAGCTGAGCCGAGAGATCTaGAGTAAGGCGACTATTTTCCAACTTCAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: CASQNLQLSREI*SKATIFQLQLF
Trigger: GAACAACTGAAGTTGGAAAATAGTCGCCTTACTGCAGATCTCTCGGCTCAGCTGCAGATTCTGACTAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp CTCCAAAGTATGGAAAAGAGAGTTGCTTTCAGGAGTTaGATCGGATTCACGCTGGCAAGCTTCTATGTGCGT +
Preference number: 6 (lower is better)
Translates to: LQSMEKRVAFRS*IGFTLASFYVR
Trigger: ACGCACATAGAAGCTTGCCAGCGTGAATCCGATCCAACTCCTGAAAGCAACTCTCTTTTCCATACTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp AGATTCTCCTCCAGGATGTGCCTATGGCTCAGATACTaGTCCATCAGCTGTTCCTTCTCAGTTTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: RFSSRMCLWLRY*SISCSFSVFIS
Trigger: GGAGATGAAAACTGAGAAGGAACAGCTGATGGACAAGTATCTGAGCCATAGGCACATCCTGGAGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GAAAGGAAGTTGTTCTCAGTATTGATAAAATCCACTGGAGATGAGTaGTTGCATCTTTCCTTCAGCTCCAGCCTGCACAGGTATGGGGTC +
Preference number: 6 (lower is better)
Translates to: ERKLFSVLIKSTGDE*LHLSFSSSLHRYGV
Trigger: GACCCCATACCTGTGCAGGCTGGAGCTGAAGGAAAGATGCAACAACTCATCTCCAGTGGATTTTATCAATACTGAGAACAACTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp CTATTGCTTCCTCCAAAGTATGGAAAAGAGAGTTGCTTTCAGGAGTaGGATCGGATTCACGCTGGCAAGCTTCTATGTGCGTTGAAGGAT +
Preference number: 6 (lower is better)
Translates to: LLLPPKYGKESCFQE*DRIHAGKLLCALKD
Trigger: ATCCTTCAACGCACATAGAAGCTTGCCAGCGTGAATCCGATCCAACTCCTGAAAGCAACTCTCTTTTCCATACTTTGGAGGAAGCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp GATTCACGCTGGCAAGCTTCTATGTGCGTTGAAGGATaGCTGAACTGTTCTGAAAGGAAGTTGTTCTCAGTA +
Preference number: 6 (lower is better)
Translates to: DSRWQASMCVEG*LNCSERKLFSV
Trigger: TACTGAGAACAACTTCCTTTCAGAACAGTTCAGCCATCCTTCAACGCACATAGAAGCTTGCCAGCGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp TTCTCAGTTTTCATCTCCAGGAACATAACCCTCAGCTaGCTCACCTCCTGTGAGAGAAACACTTTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: FSVFISRNITLS*LTSCERNTFSW
Trigger: CCAGGAAAAAGTGTTTCTCTCACAGGAGGTGAGCAAGCTGAGGGTTATGTTCCTGGAGATGAAAACTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CCA 72 bp CAGAAGAACCATGGACTCCACTATACTATCATCTCTTaGGTCCACGACAAAGTCATCCACTGTTTCTATTGC +
Preference number: 6 (lower is better)
Translates to: QKNHGLHYTIIS*VHDKVIHCFYC
Trigger: GCAATAGAAACAGTGGATGACTTTGTCGTGGACCCAAGAGATGATAGTATAGTGGAGTCCATGGTTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp GCAGAAGAACCATGGACTCCACTATACTATCATCTCTaGGGTCCACGACAAAGTCATCCACTGTTTCTATTG +
Preference number: 6 (lower is better)
Translates to: AEEPWTPLYYHL*GPRQSHPLFLL
Trigger: CAATAGAAACAGTGGATGACTTTGTCGTGGACCCAAGAGATGATAGTATAGTGGAGTCCATGGTTCTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp TTCTCAGTATTGATAAAATCCACTGGAGATGAGTTGTaGCATCTTTCCTTCAGCTCCAGCCTGCACAGGTAT +
Preference number: 6 (lower is better)
Translates to: FSVLIKSTGDEL*HLSFSSSLHRY
Trigger: ATACCTGTGCAGGCTGGAGCTGAAGGAAAGATGCAACAACTCATCTCCAGTGGATTTTATCAATACTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp CTCTTGGGTCCACGACAAAGTCATCCACTGTTTCTATaGCTTCCTCCAAAGTATGGAAAAGAGAGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: LLGPRQSHPLFL*LPPKYGKESCF
Trigger: AAAGCAACTCTCTTTTCCATACTTTGGAGGAAGCAATAGAAACAGTGGATGACTTTGTCGTGGACCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp TACTATCATCTCTTGGGTCCACGACAAAGTCATCCACTGTTTCTATaGCTTCCTCCAAAGTATGGAAAAGAGAGTTGCTTTCAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: YYHLLGPRQSHPLFL*LPPKYGKESCFQEL
Trigger: CAACTCCTGAAAGCAACTCTCTTTTCCATACTTTGGAGGAAGCAATAGAAACAGTGGATGACTTTGTCGTGGACCCAAGAGATGATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 72 bp TGCGTTGAAGGATGGCTGAACTGTTCTGAAAGGAAGTaGTTCTCAGTATTGATAAAATCCACTGGAGATGAG +
Preference number: 6 (lower is better)
Translates to: CVEGWLNCSERK*FSVLIKSTGDE
Trigger: CTCATCTCCAGTGGATTTTATCAATACTGAGAACAACTTCCTTTCAGAACAGTTCAGCCATCCTTCAACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GTTGAAGGATGGCTGAACTGTTCTGAAAGGAAGTTGTTCTCAGTATaGATAAAATCCACTGGAGATGAGTTGTTGCATCTTTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: VEGWLNCSERKLFSV*IKSTGDELLHLSFS
Trigger: GCTGAAGGAAAGATGCAACAACTCATCTCCAGTGGATTTTATCAATACTGAGAACAACTTCCTTTCAGAACAGTTCAGCCATCCTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4
CDS CAA 90 bp GCTTCTATGTGCGTTGAAGGATGGCTGAACTGTTCTGAAAGGAAGTaGTTCTCAGTATTGATAAAATCCACTGGAGATGAGTTGTTGCAT +
Preference number: 6 (lower is better)
Translates to: ASMCVEGWLNCSERK*FSVLIKSTGDELLH
Trigger: ATGCAACAACTCATCTCCAGTGGATTTTATCAATACTGAGAACAACTTCCTTTCAGAACAGTTCAGCCATCCTTCAACGCACATAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045026.4