Pregenerated sensors for SPAG16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053153Ensembl transcript IDs: ENSMUST00000065425.12, ENSMUST00000113940.4
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACAAGTCATGTGGAGGGATAAGCAAGAGCATTGCAATTTAGCCTaGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: AQVMWRDKQEHCNLA*ARSDGTTQTVGAPN Trigger: ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATTGCAATGCTCTTGCTTATCCCTCCACATGACTTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR CCA 90 bp | GGAGCTCCAAATGCCAATGCCACAAGACAGTGCCATAGAAGGTCATaGAAGGCTAGACTGTGGGTGCAATATGTAGCAAGAGAAAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GAPNANATRQCHRRS*KARLWVQYVAREKR Trigger: CCTCTTTTCTCTTGCTACATATTGCACCCACAGTCTAGCCTTCCATGACCTTCTATGGCACTGTCTTGTGGCATTGGCATTTGGAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR TCA 90 bp | AGCAGTGCAAGCATGCCTGCTCTGAGCACAGCCATAATGACCTTCTaGGATTCTAAGCAATACACAACCGGAAGTAAAACCAAAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSASMPALSTAIMTF*DSKQYTTGSKTKGF Trigger: GAAGCCTTTGGTTTTACTTCCGGTTGTGTATTGCTTAGAATCTCAGAAGGTCATTATGGCTGTGCTCAGAGCAGGCATGCTTGCACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGCCAATGGGAAGCAGGAGTGGGTaGGCTAGTGAACAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PGPGVMEQPKQWELQMPMGSRSG*ASEQRK Trigger: CTTCCTCTGTTCACTAGCCCACCCACTCCTGCTTCC...CATTGGCATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGCTTCCAGTGCCAGAGGCTTTTCCTCTACATGAGCAGTGCAAGCATGCCCCAGTTGGACAGCAATaGAATGAGAGGCTCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LWLPVPEAFPLHEQCKHAPVGQQ*NERLLV Trigger: TACCAAGAGCCTCTCATTTCATTGCTGTCCAACTGG...GGCATGCTTGCACTGCTCATGTAGAGGAAAAGCCTCTGGCACTGGAAGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR GCA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGAATTCTGGTCTACCTaGAGGGTTCAGGAGGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: NLAWARSDGTTQTVGAPNEFWST*RVQEVR Trigger: CCTTACCTCCTGAACCCTGCAGGTAGACCAGAATTC...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGCCAATGCAGGAAGGCAAACAGTaGTGGTGTTATAAAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: PGPGVMEQPKQWELQMPMQEGKQ*WCYKKV Trigger: CACCTTTTTATAACACCAGCACTGTTTGCCTTCCTG...CATTGGCATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGCCAATGCAGACAGAGATAACTTaGAATCTCAAGGATAACTGC | + |
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Preference number: 2 (lower is better) Translates to: PGPGVMEQPKQWELQMPMQTEIT*NLKDNC Trigger: GCAGTTATCCTTGAGATTGCAAGTTATCTCTGTCTG...CATTGGCATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGCCTTTGAAGTCATCATGTCTGGGATTCCCTGTGACTAAGAATAAGCAACCCAGTGTAGAGGAATaGCAGGACAGGGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TEPLKSSCLGFPVTKNKQPSVEE*QDREAG Trigger: TCCTGCTTCCCTGTCCTGGCATTCCTCTACACTGGG...TTGCTTATTCTTAGTCACAGGGAATCCCAGACATGATGACTTCAAAGGCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CCA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGAAGGCAAACAGTGCTaGTGTTATAAAAAGGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NLAWARSDGTTQTVGAPNEGKQC*CYKKVK Trigger: TTTCACCTTTTTATAACACCAGCACTGTTTGCCTTC...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CCA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATTTTCAAGTGGACTGTTaGGTACTTAAAATCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: NLAWARSDGTTQTVGAPNFQVDC*VLKIRT Trigger: AGTTCTGATTTTAAGTACCCAACAGTCCACTTGAAA...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CCA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCGAGGAAGGGAAAGGGTaGGAATACACAGAGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: ESSSSFMGDIITNERNPTEEGKG*EYTEPL Trigger: CAAAGGCTCTGTGTATTCCCACCCTTTCCCTTCCTC...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR GCA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCGATAAGCAAGAGCATTaGAATTTAGCCTGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ESSSSFMGDIITNERNPTDKQEH*NLAWAR Trigger: CCTGGCCCAGGCTAAATTGCAATGCTCTTGCTTATC...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CCA 90 bp | AACGAGAGAAATCCCACCACAGCTACTATCTATATGAAAGAAGAGATTAACAAGGAAATGAGAGGCTCTTaGTATTGTGAAGGGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NERNPTTATIYMKEEINKEMRGS*YCEGPQ Trigger: CTGGGGCCCTTCACAATACCAAGAGCCTCTCATTTC...CTTGTTAATCTCTTCTTTCATATAGATAGTAGCTGTGGTGGGATTTCTCTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR TCA 90 bp | AACGAGAGAAATCCCACCACAGCTACTATCTATATGAAAGAAGAGATTAACAAGGTGAGAATAAGTAGCTaGAAGGATGAAGTGGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: NERNPTTATIYMKEEINKVRISS*KDEVGS Trigger: GGACCCCACTTCATCCTTTCAGCTACTTATTCTCAC...CTTGTTAATCTCTTCTTTCATATAGATAGTAGCTGTGGTGGGATTTCTCTCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR TCA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCTCATGTAGAAACATGTaGGGGCACTTAAGGGAAACG | + |
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Preference number: 2 (lower is better) Translates to: ESSSSFMGDIITNERNPTSCRNM*GHLRET Trigger: CGTTTCCCTTAAGTGCCCTCACATGTTTCTACATGA...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CCA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCTGGAAGGCTAGACTGTaGGTGCAATATGTAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: ESSSSFMGDIITNERNPTWKARL*VQYVAR Trigger: TCTTGCTACATATTGCACCCACAGTCTAGCCTTCCA...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR CAA 90 bp | AATGGTGACATCAAGATTCTGAAAGTAAATGTTGATCTGGGAATCTaGGACTCCTTCAGGAGTCCAAAAAGAACAAGGAATAAGAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: NGDIKILKVNVDLGI*DSFRSPKRTRNKSP Trigger: CGGACTCTTATTCCTTGTTCTTTTTGGACTCCTGAAGGAGTCCAAGATTCCCAGATCAACATTTACTTTCAGAATCTTGATGTCACCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCTAAGCAATACACAACCGGAAGTAAAACCAAAGGCTTCAGTTTTAGATGAGACTCAAGGCTTCAGCTaGATATATAGCAGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: ILSNTQPEVKPKASVLDETQGFS*IYSRGW Trigger: CCATCCTCTGCTATATATGCAGCTGAAGCCTTGAGT...CTCATCTAAAACTGAAGCCTTTGGTTTTACTTCCGGTTGTGTATTGCTTAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CCA 90 bp | AACGAGAGAAATCCCACCACAGCTACTATCTATATGAAAGAAGAGATTAACAAGTTGATCTGGGAATCTTaGACTCCTTCAGGAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: NERNPTTATIYMKEEINKLIWES*TPSGVQ Trigger: TTGGACTCCTGAAGGAGTCCAAGATTCCCAGATCAA...CTTGTTAATCTCTTCTTTCATATAGATAGTAGCTGTGGTGGGATTTCTCTCGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR TCA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCTCTGAAAGTAAATGTTaGTCTGGGAATCTTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: ESSSSFMGDIITNERNPTSESKC*SGNLGL Trigger: GAGTCCAAGATTCCCAGATCAACATTTACTTTCAGA...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR GCA 72 bp | CTTCCAGTGCCAGAGGCTTTTCCTCTACATGAGCAGTaGAAGCATGCCTGCTCTGAGCACAGCCATAATGAC | + |
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Preference number: 3 (lower is better) Translates to: LPVPEAFPLHEQ*KHACSEHSHND Trigger: GTCATTATGGCTGTGCTCAGAGCAGGCATGCTTGCACTGCTCATGTAGAGGAAAAGCCTCTGGCACTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR CCA 72 bp | ATGGCCCAGTTGGACAGCAATGAAATGAGAGGCTCTTaGTATTGTGAAGGGCCCCAGTGTAGAGGAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: MAQLDSNEMRGS*YCEGPQCRGMP Trigger: TGGCATTCCTCTACACTGGGGCCCTTCACAATACCAAGAGCCTCTCATTTCATTGCTGTCCAACTGGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR GCA 72 bp | GAGGCTTTTCCTCTACATGAGCAGTGCAAGCATGCCTaGTCTGAGCACAGCCATAATGACCTTCTGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: EAFPLHEQCKHA*SEHSHNDLLRF Trigger: GAATCTCAGAAGGTCATTATGGCTGTGCTCAGAGCAGGCATGCTTGCACTGCTCATGTAGAGGAAAAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR CCA 72 bp | ATGTGGAGGGATAAGCAAGAGCATTGCAATTTAGCCTaGGCCAGGAGTGATGGAACAACCCAAACAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: MWRDKQEHCNLA*ARSDGTTQTVG Trigger: TCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATTGCAATGCTCTTGCTTATCCCTCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR CCA 72 bp | AATGCCAATGCCACAAGACAGTGCCATAGAAGGTCATaGAAGGCTAGACTGTGGGTGCAATATGTAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: NANATRQCHRRS*KARLWVQYVAR Trigger: TCTTGCTACATATTGCACCCACAGTCTAGCCTTCCATGACCTTCTATGGCACTGTCTTGTGGCATTGGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR TCA 72 bp | AGCATGCCTGCTCTGAGCACAGCCATAATGACCTTCTaGGATTCTAAGCAATACACAACCGGAAGTAAAACC | + |
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Preference number: 3 (lower is better) Translates to: SMPALSTAIMTF*DSKQYTTGSKT Trigger: GGTTTTACTTCCGGTTGTGTATTGCTTAGAATCTCAGAAGGTCATTATGGCTGTGCTCAGAGCAGGCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR-3UTR CAA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATATAAGAGTCCGGGTATaGATAAAAGACATGATGAAG | + |
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Preference number: 3 (lower is better) Translates to: NLAWARSDGTTQTVGAPNIRVRV*IKDMMK Trigger: CTTCATCATGTCTTTTATCAATACCCGGACTCTTAT...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| 3UTR CCA 72 bp | CAGGAAATCAGTATCAACACTTGGTCAGCTTTCAAGTaGACTGTTGGGTACTTAAAATCAGAACTCAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: QEISINTWSAFK*TVGYLKSELRE Trigger: TTCTCTGAGTTCTGATTTTAAGTACCCAACAGTCCACTTGAAAGCTGACCAAGTGTTGATACTGATTTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR GCA 90 bp | GGGACTCAAGGCTTCAGCTGCATATATAGCAGAGGATGGCCCAGTTGGACAGCATGGGTGACAAGCCAATaGCCAGCTCCTCCAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: GTQGFSCIYSRGWPSWTAWVTSQ*PAPPAP Trigger: GGGTGCTGGAGGAGCTGGGCATTGGCTTGTCACCCA...TGCTGTCCAACTGGGCCATCCTCTGCTATATATGCAGCTGAAGCCTTGAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCACCTCGCCGGTGGGTaGCAAGCCAATGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCHLAGG*QANAQL Trigger: GAGCTGGGCATTGGCTTGTCACCCACCGGCGAGGTG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS-3UTR TCA 90 bp | CCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGCCAATGACCAGCTCTGTCTCCTaGCTCTCTTGTGATAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PGPGVMEQPKQWELQMPMTSSVS*LSCDRS Trigger: GCTTCTATCACAAGAGAGTCAGGAGACAGAGCTGGT...CATTGGCATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR TCA 90 bp | CTGTGGCTTCCAGTGCCAGAGGCTTTTCCTCTACATGAGCAGTGCAAGCATGCCTTCTTCAGTGTTGCTTaGAGCCCAGAAATCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LWLPVPEAFPLHEQCKHAFFSVA*SPEIFP Trigger: TGGGAAGATTTCTGGGCTTCAAGCAACACTGAAGAA...GGCATGCTTGCACTGCTCATGTAGAGGAAAAGCCTCTGGCACTGGAAGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTGGGTGACAAGCCAATaGCCAGCTCCTCCAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCWVTSQ*PAPPAP Trigger: GGGTGCTGGAGGAGCTGGGCATTGGCTTGTCACCCA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS-3UTR TCA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATTCTTTCTCACAACTGTaGCCAGCTCTGTCTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: NLAWARSDGTTQTVGAPNSFSQL*PALSPD Trigger: GTCAGGAGACAGAGCTGGTCACAGTTGTGAGAAAGA...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTCTGCAGGGATGCATaGCGATGCAGCTCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLCRDA*RCSSLG Trigger: TCCCAGTGAGCTGCATCGTCATGCATCCCTGCAGAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCCGTTGGCACTCGCCTaGGCTAAAACTCGACCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCPLALA*AKTRPD Trigger: GTCAGGTCGAGTTTTAGCTCAGGCGAGTGCCAACGG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| 3UTR CAA 72 bp | GAGGAGGAAGGGAAAGGGTGGGAATACACAGAGCCTTaGAAGTCATCATGTCTGGGATTCCCTGTGACTAAG | + |
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Preference number: 4 (lower is better) Translates to: EEEGKGWEYTEP*KSSCLGFPVTK Trigger: CTTAGTCACAGGGAATCCCAGACATGATGACTTCAAAGGCTCTGTGTATTCCCACCCTTTCCCTTCCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR TCA 90 bp | ATTCTAAGCAATACACAACCGGAAGTAAAACCAAAGGCTTCAGTTTTAGATGAGCACCTCGCCGGTGGGTaGCAAGCCAATGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ILSNTQPEVKPKASVLDEHLAGG*QANAQL Trigger: GAGCTGGGCATTGGCTTGTCACCCACCGGCGAGGTG...CTCATCTAAAACTGAAGCCTTTGGTTTTACTTCCGGTTGTGTATTGCTTAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR TCA 90 bp | GGGACTCAAGGCTTCAGCTGCATATATAGCAGAGGATGGCCCAGTTGGACAGCATTTCAGCTGCCTGTTTaGAGTGCTTCAATTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GTQGFSCIYSRGWPSWTAFQLPV*SASIPS Trigger: AGAAGGAATTGAAGCACTTCAAACAGGCAGCTGAAA...TGCTGTCCAACTGGGCCATCCTCTGCTATATATGCAGCTGAAGCCTTGAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR GCA 90 bp | CATTGCAATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTAGTGTCCCTGTACTTTaGTCTCTTGTGCTAATGGAG | + |
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Preference number: 4 (lower is better) Translates to: HCNLAWARSDGTTQTVGASVPVL*SLVLME Trigger: CTCCATTAGCACAAGAGAGCAAAGTACAGGGACACT...AGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATTGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTTGCTGCCACTCGGATaGAAGCAGCAGCCAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLLPLG*KQQPDN Trigger: GTTGTCTGGCTGCTGCTTCCATCCGAGTGGCAGCAA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCAGATCCACAACCGAATaGTGCCGTCAGAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCRSTTE*CRQSLQ Trigger: CTGGAGGCTCTGACGGCACCATTCGGTTGTGGATCT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCAGGATGCTATTATGTaGCCCCTAGGCGTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCQDAIM*PLGVKV Trigger: CACCTTCACGCCTAGGGGTCACATAATAGCATCCTG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCCACAACCGAATGGTaGCGTCAGAGCCTCCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSTTEW*RQSLQN Trigger: ATTCTGGAGGCTCTGACGGCACCATTCGGTTGTGGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS-3UTR CCA 90 bp | CCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGCCAATGGCTGAAATTGTCATCTaGTATCTCTTCATATTCGCA | + |
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Preference number: 4 (lower is better) Translates to: PGPGVMEQPKQWELQMPMAEIVI*YLFIFA Trigger: TGCGAATATGAAGAGATACCAGATGACAATTTCAGC...CATTGGCATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCAAGTACATTGCCCTGTaGGAGGCCCACCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCKYIAL*EAHHLP Trigger: TGGAAGATGGTGGGCCTCCCACAGGGCAATGTACTT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCACCAGCTCTGTCTCCTaGCTCTCTTGTGATAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCTSSVS*LSCDRS Trigger: GCTTCTATCACAAGAGAGTCAGGAGACAGAGCTGGT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCTTTCTCACAACTGTaGCCAGCTCTGTCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSFSQL*PALSPD Trigger: GTCAGGAGACAGAGCTGGTCACAGTTGTGAGAAAGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTGGACACGATTGGAATaGGTTTCCGGAAGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCWTRLE*VSGSPT Trigger: TGTGGGACTTCCGGAAACTCATTCCAATCGTGTCCA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTTCCAGTGCCAGAGGCTTTTCCTCTACATGAGCAGTGCAAGCATGCCTCCAATGATGTGAATTaGTTTTTCCAGATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWLPVPEAFPLHEQCKHASNDVN*FFQIFF Trigger: GAAGAAGATCTGGAAAAAGCAATTCACATCATTGGA...GGCATGCTTGCACTGCTCATGTAGAGGAAAAGCCTCTGGCACTGGAAGCCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR GCA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGCTGCCTGTTTGAAGTaGTTCAATTCCTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLAWARSDGTTQTVGAPNAACLK*FNSFFK Trigger: CTTGAAGAAGGAATTGAAGCACTTCAAACAGGCAGC...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTGCGCTTATGATGCATaGGATGGAAGTCCCGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCCAYDA*DGSPVP Trigger: AGGAACGGGACTTCCATCGCATGCATCATAAGCGCA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR GCA 90 bp | CATTGCAATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTTCTTTTCTTGCACTATaGGCTTATGATGCATGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: HCNLAWARSDGTTQTVGASFLAL*AYDACD Trigger: ATCGCATGCATCATAAGCGCATAGTGCAAGAAAAGA...AGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATTGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCACGGGCATCACAGGATaGTATTATGTGACCCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCTGITG*YYVTPR Trigger: CCTAGGGGTCACATAATAGCATCCTGTGATGCCCGT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTGAGTTGGGCCCTCTaGACTGTTTTCTTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLSWAL*TVFFLT Trigger: TGTGAGAAAGAAAACAGTTCAGAGGGCCCAACTCAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCGACGATGCAGCTCACTaGGAGTTCATGAAGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCDDAAH*EFMKSE Trigger: TTCAGACTTCATGAACTCCCAGTGAGCTGCATCGTC...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTCATTTCCCGAACTTaGACCCACATCAATGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLISRT*THINGH Trigger: GTGTCCATTGATGTGGGTCCAAGTTCGGGAAATGAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTTCTTCAGTGTTGCTTaGAGCCCAGAAATCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCFFSVA*SPEIFP Trigger: TGGGAAGATTTCTGGGCTTCAAGCAACACTGAAGAA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTTGATCTGGGAATCTTGGACTCCTTCAGGAGTCCAAAAAGAACAAGGCTGAGTTGGGCCCTCTaGACTGTTTTCTTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VNVDLGILDSFRSPKRTRLSWAL*TVFFLT Trigger: TGTGAGAAAGAAAACAGTTCAGAGGGCCCAACTCAG...CCTTGTTCTTTTTGGACTCCTGAAGGAGTCCAAGATTCCCAGATCAACATTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTTGACAGAATGCATGTaGCCATACAGAGACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLTECM*PYRDCS Trigger: TGAGCAGTCTCTGTATGGTCACATGCATTCTGTCAA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | ATTCTAAGCAATACACAACCGGAAGTAAAACCAAAGGCTTCAGTTTTAGATGAGCCTCTTGACTGCTGCTaGTGGAAGGAAGGAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSNTQPEVKPKASVLDEPLDCC*WKEGVG Trigger: CCCAACTCCTTCCTTCCATCAGCAGCAGTCAAGAGG...CTCATCTAAAACTGAAGCCTTTGGTTTTACTTCCGGTTGTGTATTGCTTAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAAGGAATAAGAGTCCGGGTATTGATAAAAGACATGATGAAGGGAGGGTGGAAAGTTCCCTCTTaGCTGCTGCTGATGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEQGIRVRVLIKDMMKGGWKVPS*LLLMEG Trigger: TCCTTCCATCAGCAGCAGTCAAGAGGGAACTTTCCA...CCCTCCCTTCATCATGTCTTTTATCAATACCCGGACTCTTATTCCTTGTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAAGGAATAAGAGTCCGGGTATTGATAAAAGACATGATGAAGGGAGGGTGCGCTTATGATGCATaGGATGGAAGTCCCGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEQGIRVRVLIKDMMKGGCAYDA*DGSPVP Trigger: AGGAACGGGACTTCCATCGCATGCATCATAAGCGCA...CCCTCCCTTCATCATGTCTTTTATCAATACCCGGACTCTTATTCCTTGTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTGGCTTGCTCTCCAATaGTGTGAATTGCTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCWLALQ*CELLFP Trigger: TGGAAAAAGCAATTCACATCATTGGAGAGCAAGCCA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTGGTCATCCCCATTTTaGTCAGGAAATTGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCWSSPF*SGNCRE Trigger: TTCTCTGCAATTTCCTGATCAAAATGGGGATGACCA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTTTCAGCTGCCTGTTTaGAGTGCTTCAATTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCFQLPV*SASIPS Trigger: AGAAGGAATTGAAGCACTTCAAACAGGCAGCTGAAA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCGCTGCCTGTTTGAAGTaGTTCAATTCCTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCAACLK*FNSFFK Trigger: CTTGAAGAAGGAATTGAAGCACTTCAAACAGGCAGC...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCAGTAGATCTTCTTTaGCCTTTTCAGCTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSVDLL*PFQLPV Trigger: AACAGGCAGCTGAAAAGGCCAAAGAAGATCTACTGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTTAAGATCCAGCAAATaGATAATCCCGTTGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLRSSK*IIPLAL Trigger: GAGTGCCAACGGGATTATCCATTTGCTGGATCTTAA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| 3UTR CAA 72 bp | GGAGTCCAAAAAGAACAAGGAATAAGAGTCCGGGTATaGATAAAAGACATGATGAAGGGAGGGAAAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVQKEQGIRVRV*IKDMMKGGKAR Trigger: CCTAGCTTTCCCTCCCTTCATCATGTCTTTTATCAATACCCGGACTCTTATTCCTTGTTCTTTTTGGACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCCTTCAATAAAGCATaGTGCTTCTCATGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSFNKA*CFSCNT Trigger: GGTGTTACATGAGAAGCATCATGCTTTATTGAAGGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCCTTTGAAGTCATCATGTCTGGGATTCCCTGTGACTAAGAATAAGCAATCAGAATCTTCCATTTaGCTCATGCTGATGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TEPLKSSCLGFPVTKNKQSESSI*LMLMET Trigger: TGTCTCCATCAGCATGAGTCAAATGGAAGATTCTGA...TTGCTTATTCTTAGTCACAGGGAATCCCAGACATGATGACTTCAAAGGCTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTGCATTACATTCCTTaGAGGAAGAATGGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLHYIP*RKNGLL Trigger: CAACAAACCATTCTTCCTGCAAGGAATGTAATGCAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCTTTTCTTGCACTATaGGCTTATGATGCATGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSFLAL*AYDACD Trigger: ATCGCATGCATCATAAGCGCATAGTGCAAGAAAAGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCAAGGGAAAAACTCAATaGTGTTCACAGAGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCKGKTQ*CSQSLC Trigger: ACACAGACTCTGTGAACAGCATTGAGTTTTTCCCTT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTGTTGTTCCAAAATATaGATGTCTCTGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCCCSKI*MSLACS Trigger: AGAGCAAGCCAGAGACATCCATATTTTGGAACAACA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCAGTCACGTTTGGATCTaGTTGCATATCTACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSHVWI*LHIYRK Trigger: TTTCCTGTAGATATGCAACCAGATCCAAACGTGACT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCACAAGAGGTCTTCGGTaGTCTTTTTCTGAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSSSFMGDIITNERNPTTRGLR*SFSECP Trigger: GGGACACTCAGAAAAAGACCACCGAAGACCTCTTGT...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAAGGAATAAGAGTCCGGGTATTGATAAAAGACATGATGAAGGGAGGGTGGCTTGCTCTCCAATaGTGTGAATTGCTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KEQGIRVRVLIKDMMKGGWLALQ*CELLFP Trigger: TGGAAAAAGCAATTCACATCATTGGAGAGCAAGCCA...CCCTCCCTTCATCATGTCTTTTATCAATACCCGGACTCTTATTCCTTGTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTTAATTACAGGAACCTaGATATGTCCCATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLITGT*ICPMSM Trigger: CATAGACATGGGACATATTCAGGTTCCTGTAATTAA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTCACTGGGAGTTCATaGAGTCTGAAAATATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLTGSS*SLKILF Trigger: AAACAATATTTTCAGACTTCATGAACTCCCAGTGAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | ATTCTAAGCAATACACAACCGGAAGTAAAACCAAAGGCTTCAGTTTTAGATGAGTCGGTGGTCTTTTTCTaGGTGTCCCTGTACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSNTQPEVKPKASVLDESVVFF*VSLYFA Trigger: AGCAAAGTACAGGGACACTCAGAAAAAGACCACCGA...CTCATCTAAAACTGAAGCCTTTGGTTTTACTTCCGGTTGTGTATTGCTTAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCACGTTTGGATCTGGTTaGATATCTACAGGAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCTFGSG*ISTGNS Trigger: AGAATTTCCTGTAGATATGCAACCAGATCCAAACGT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCGCTGAAATTGTCATCTaGTATCTCTTCATATTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCAEIVI*YLFIFA Trigger: TGCGAATATGAAGAGATACCAGATGACAATTTCAGC...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCCTTTGAAGTCATCATGTCTGGGATTCCCTGTGACTAAGAATAAGCAATGTTGTTCCAAAATATaGATGTCTCTGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEPLKSSCLGFPVTKNKQCCSKI*MSLACS Trigger: AGAGCAAGCCAGAGACATCCATATTTTGGAACAACA...TTGCTTATTCTTAGTCACAGGGAATCCCAGACATGATGACTTCAAAGGCTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAAGGAATAAGAGTCCGGGTATTGATAAAAGACATGATGAAGGGAGGGTCAGTAGATCTTCTTTaGCCTTTTCAGCTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEQGIRVRVLIKDMMKGGSVDLL*PFQLPV Trigger: AACAGGCAGCTGAAAAGGCCAAAGAAGATCTACTGA...CCCTCCCTTCATCATGTCTTTTATCAATACCCGGACTCTTATTCCTTGTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCCAATGATGTGAATTaGTTTTTCCAGATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSNDVN*FFQIFF Trigger: GAAGAAGATCTGGAAAAAGCAATTCACATCATTGGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCGTAGTCAAATTTTGCTaGAGAAACGTTTTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCVVKFC*RNVFCT Trigger: TGTACAGAAAACGTTTCTGCAGCAAAATTTGACTAC...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTTGTAGTCAAATTTTaGTGCAGAAACGTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLVVKF*CRNVFC Trigger: ACAGAAAACGTTTCTGCAGCAAAATTTGACTACAAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CCA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCCTTGCAGGAAGAATaGTTTGTTGTTCCAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSLQEE*FVVPKY Trigger: ATATTTTGGAACAACAAACCATTCTTCCTGCAAGGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR TCA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCTCCTTCAATAAAGCATaGTGCTTCTCATGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ESSSSFMGDIITNERNPTSFNKA*CFSCNT Trigger: GGTGTTACATGAGAAGCATCATGCTTTATTGAAGGA...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | AACGAGAGAAATCCCACCACAGCTACTATCTATATGAAAGAAGAGATTAACAAGCCTCTTGGACTCTGTTaGAGATGGCTTTTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NERNPTTATIYMKEEINKPLGLC*RWLFLI Trigger: AATGAGAAAAAGCCATCTTCAACAGAGTCCAAGAGG...CTTGTTAATCTCTTCTTTCATATAGATAGTAGCTGTGGTGGGATTTCTCTCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR TCA 90 bp | GATCATTACACTCATGAATTTGTTGGTAAAACTCAAAAGTCCCACCACACATATTTAATTACAGGAACCTaGATATGTCCCATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: DHYTHEFVGKTQKSHHTYLITGT*ICPMSM Trigger: CATAGACATGGGACATATTCAGGTTCCTGTAATTAA...ATATGTGTGGTGGGACTTTTGAGTTTTACCAACAAATTCATGAGTGTAATGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS TCA 90 bp | GTAGGCGCCCTCGGAGGTCACCGCCTCTGTCACCTCGCCGGTGGGTaGCAAGCCAATGCCCAGCTCCTCCAGCACCCGCAGCGGCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VGALGGHRLCHLAGG*QANAQLLQHPQRRD Trigger: GTCCCGCCGCTGCGGGTGCTGGAGGAGCTGGGCATTGGCTTGTCACCCACCGGCGAGGTGACAGAGGCGGTGACCTCCGAGGGCGCCTAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS CCA 90 bp | GGTAGTAGGCGCCCTCGGAGGTCACCGCCTCTGTCACCTCGCCGGTaGGTGACAAGCCAATGCCCAGCTCCTCCAGCACCCGCAGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSRRPRRSPPLSPRR*VTSQCPAPPAPAAA Trigger: CGCCGCTGCGGGTGCTGGAGGAGCTGGGCATTGGCTTGTCACCCACCGGCGAGGTGACAGAGGCGGTGACCTCCGAGGGCGCCTACTACC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS GCA 90 bp | TATCCAGTGAGGCAGAAGCCACGAAGTCACCACAGGAGTGCCAGGTaGAGGACCATACGGCATGGTTGTGTCCTTCAAGGGTCAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YPVRQKPRSHHRSAR*RTIRHGCVLQGSRC Trigger: GCACCTTGACCCTTGAAGGACACAACCATGCCGTATGGTCCTGCACCTGGCACTCCTGTGGTGACTTCGTGGCTTCTGCCTCACTGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CCA 90 bp | TTGCTGCCACTCGGATGGAAGCAGCAGCCAGACAACCAATCAGTGTaGCCAGATCCTGTAAGAAGTACATTGCCCTGTGGGAGGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLPLGWKQQPDNQSV*PDPVRSTLPCGRPT Trigger: GGTGGGCCTCCCACAGGGCAATGTACTTCTTACAGGATCTGGCCACACTGATTGGTTGTCTGGCTGCTGCTTCCATCCGAGTGGCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS TCA 90 bp | GCACCGTTCACTGTTGACATCCCAGATTTTACTCGTCATATCCAGTaGGGCAGAAGCCACGAAGTCACCACAGGAGTGCCAGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: APFTVDIPDFTRHIQ*GRSHEVTTGVPGAG Trigger: TCCTGCACCTGGCACTCCTGTGGTGACTTCGTGGCTTCTGCCTCACTGGATATGACGAGTAAAATCTGGGATGTCAACAGTGAACGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS GCA 90 bp | TTTCCGGAAGTCCCACAGCTTTGTAACTCCACGGGCATCACAGGATaGTATTATGTGACCCCTAGGCGTGAAGGTGGCATCATTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPEVPQLCNSTGITG*YYVTPRREGGIIDR Trigger: TCTGTCAATGATGCCACCTTCACGCCTAGGGGTCACATAATAGCATCCTGTGATGCCCGTGGAGTTACAAAGCTGTGGGACTTCCGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CCA 90 bp | CAACCAATCAGTGTGGCCAGATCCTGTAAGAAGTACATTGCCCTGTaGGAGGCCCACCATCTTCCAGAGACGATCTTCACTACAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPISVARSCKKYIAL*EAHHLPETIFTTGD Trigger: ATCTCCTGTAGTGAAGATCGTCTCTGGAAGATGGTGGGCCTCCCACAGGGCAATGTACTTCTTACAGGATCTGGCCACACTGATTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CCA 90 bp | GTTCACCTCATTTCCCGAACTTGGACCCACATCAATGGACACGATTaGAATGAGTTTCCGGAAGTCCCACAGCTTTGTAACTCCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHLISRTWTHINGHD*NEFPEVPQLCNSTG Trigger: GCCCGTGGAGTTACAAAGCTGTGGGACTTCCGGAAACTCATTCCAATCGTGTCCATTGATGTGGGTCCAAGTTCGGGAAATGAGGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GGGACTCAAGGCTTCAGCTGCATATATAGCAGAGGATGGCCCAGTTGGACAGCAGAGTGTCCCTGTACTTaGCTCTCTTGTGCTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTQGFSCIYSRGWPSWTAECPCT*LSCANG Trigger: TCCATTAGCACAAGAGAGCAAAGTACAGGGACACTC...TGCTGTCCAACTGGGCCATCCTCTGCTATATATGCAGCTGAAGCCTTGAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | CATTGCAATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCTCAGTAGATCTTCTTaGGCCTTTTCAGCTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HCNLAWARSDGTTQTVGALSRSS*AFSAAC Trigger: ACAGGCAGCTGAAAAGGCCAAAGAAGATCTACTGAG...AGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATTGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCCTGTAAGAAGTACATaGCCCTGTGGGAGGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCPVRST*PCGRPT Trigger: GGTGGGCCTCCCACAGGGCAATGTACTTCTTACAGG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATTTGGAAAGTTCCCTCTaGACTGCTGCTGATGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLAWARSDGTTQTVGAPNLESSL*TAADGR Trigger: CCTTCCATCAGCAGCAGTCAAGAGGGAACTTTCCAA...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS TCA 90 bp | CCCGATTTAAGATCCAGCAAATGGATAATCCCGTTGGCACTCGCCTaGGCTAAAACTCGACCTGACTGGTCAAAGTTCACCTCATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PDLRSSKWIIPLALA*AKTRPDWSKFTSFP Trigger: GGGAAATGAGGTGAACTTTGACCAGTCAGGTCGAGTTTTAGCTCAGGCGAGTGCCAACGGGATTATCCATTTGCTGGATCTTAAATCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GGGACTCAAGGCTTCAGCTGCATATATAGCAGAGGATGGCCCAGTTGGACAGCATTTTCAGCTGCCTGTTaGAAGTGCTTCAATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTQGFSCIYSRGWPSWTAFSAAC*KCFNSF Trigger: GAAGGAATTGAAGCACTTCAAACAGGCAGCTGAAAA...TGCTGTCCAACTGGGCCATCCTCTGCTATATATGCAGCTGAAGCCTTGAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS TCA 90 bp | CTGTTCGTGCATCCCACACAGACAAGGTCTTGTCTGCAGAAGCGGTaGGAAGAATGTTGGAGAAAGGGAAAAACTCAATGCTGTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LFVHPTQTRSCLQKR*EECWRKGKTQCCSQ Trigger: CTGTGAACAGCATTGAGTTTTTCCCTTTCTCCAACATTCTTCTCACCGCTTCTGCAGACAAGACCTTGTCTGTGTGGGATGCACGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS TCA 90 bp | GAAAACACCACACTGTGCACTTCACTCTCGTGGCCCACCAGTTTGTaGATTTGCCCCGATTTAAGATCCAGCAAATGGATAATCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ENTTLCTSLSWPTSL*ICPDLRSSKWIIPL Trigger: CAACGGGATTATCCATTTGCTGGATCTTAAATCGGGGCAAATTCACAAACTGGTGGGCCACGAGAGTGAAGTGCACAGTGTGGTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATGAAGACTTTTCTGAGTaGGGCCCTCTGAACTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NLAWARSDGTTQTVGAPNEDFSE*GPLNCF Trigger: AAAACAGTTCAGAGGGCCCAACTCAGAAAAGTCTTC...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GGGACTCAAGGCTTCAGCTGCATATATAGCAGAGGATGGCCCAGTTGGACAGCATGCAGGAAGAATGGTTaGTTGTTCCAAAATATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GTQGFSCIYSRGWPSWTACRKNG*LFQNMD Trigger: ATCCATATTTTGGAACAACAAACCATTCTTCCTGCA...TGCTGTCCAACTGGGCCATCCTCTGCTATATATGCAGCTGAAGCCTTGAGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCCTCATTTCCCGAACTaGGACCCACATCAATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCPHFPN*DPHQWT Trigger: TGTCCATTGATGTGGGTCCAAGTTCGGGAAATGAGG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTCAGTAGATCTTCTTaGGCCTTTTCAGCTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLSRSS*AFSAAC Trigger: ACAGGCAGCTGAAAAGGCCAAAGAAGATCTACTGAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTGGTCATCCCCATTTaGATCAGGAAATTGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLVIPI*IRKLQR Trigger: TCTCTGCAATTTCCTGATCAAAATGGGGATGACCAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | AATTTAGCCTGGGCCAGGAGTGATGGAACAACCCAAACAGTGGGAGCTCCAAATTCCTTCTTCAAGTTTTaGTTCTCAGTCTCTAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLAWARSDGTTQTVGAPNSFFKF*FSVSKS Trigger: GCTTTTAGAGACTGAGAACAAAAACTTGAAGAAGGA...ATTTGGAGCTCCCACTGTTTGGGTTGTTCCATCACTCCTGGCCCAGGCTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCGAAGACTTTTCTGAGTaGGGCCCTCTGAACTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCEDFSE*GPLNCF Trigger: AAAACAGTTCAGAGGGCCCAACTCAGAAAAGTCTTC...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCACCAGTTTGTGAATTaGCCCCGATTTAAGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCHQFVN*PRFKIQ Trigger: CTGGATCTTAAATCGGGGCAAATTCACAAACTGGTG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CCA 90 bp | TTAAAGTCACTTCCTTTCTTCTGTATTAACTCATACCACTCGGCCTaGAAGCAGTCCAGAGTTCTGGTCATCCCCATTTTGATCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKSLPFFCINSYHSA*KQSRVLVIPILIRK Trigger: TTTCCTGATCAAAATGGGGATGACCAGAACTCTGGACTGCTTCCAGGCCGAGTGGTATGAGTTAATACAGAAGAAAGGAAGTGACTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCCTGCATTACATTCCTaGCAGGAAGAATGGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCPALHS*QEEWFV Trigger: AACAAACCATTCTTCCTGCAAGGAATGTAATGCAGG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCCTTTGAAGTCATCATGTCTGGGATTCCCTGTGACTAAGAATAAGCAACTGGTCATCCCCATTTaGATCAGGAAATTGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TEPLKSSCLGFPVTKNKQLVIPI*IRKLQR Trigger: TCTCTGCAATTTCCTGATCAAAATGGGGATGACCAG...TTGCTTATTCTTAGTCACAGGGAATCCCAGACATGATGACTTCAAAGGCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTTTTCAGCTGCCTGTTaGAAGTGCTTCAATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCFSAAC*KCFNSF Trigger: GAAGGAATTGAAGCACTTCAAACAGGCAGCTGAAAA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCGAGCTTGTTCTTTTCTaGCACTATGCGCTTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCELVLF*HYALMM Trigger: CATCATAAGCGCATAGTGCAAGAAAAGAACAAGCTC...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCAGGTCAGCAATGAGCTaGTTCTTTTCTTGCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCRSAMS*FFSCTM Trigger: CATAGTGCAAGAAAAGAACAAGCTCATTGCTGACCT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCCTATGTTCTTCAGTGTaGCTTGAAGCCCAGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCLCSSV*LEAQKS Trigger: AGATTTCTGGGCTTCAAGCAACACTGAAGAACATAG...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCGTGCATTCACCTTTGTaGAGGTCCCATAGTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCVHSPL*RSHSLI Trigger: AATCAAACTATGGGACCTCAACAAAGGTGAATGCAC...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTACATGAAGTCACGTTaGGATCTGGTTGCATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCYMKSR*DLVAYL Trigger: TAGATATGCAACCAGATCCAAACGTGACTTCATGTA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAAGGAATAAGAGTCCGGGTATTGATAAAAGACATGATGAAGGGAGGGCCCTCTTGGACTCTGTaGAAGATGGCTTTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KEQGIRVRVLIKDMMKGGPSWTL*KMAFSH Trigger: ATGAGAAAAAGCCATCTTCAACAGAGTCCAAGAGGG...CCCTCCCTTCATCATGTCTTTTATCAATACCCGGACTCTTATTCCTTGTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCAGGAAGAATGGTTTGTaGTTCCAAAATATGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCRKNGL*FQNMDV Trigger: GACATCCATATTTTGGAACAACAAACCATTCTTCCT...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTGCAGGAAGAATGGTTaGTTGTTCCAAAATATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCCRKNG*LFQNMD Trigger: ATCCATATTTTGGAACAACAAACCATTCTTCCTGCA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS-3UTR CAA 90 bp | GAAACATTTTTAAGCCTTAGAGGGAATGCCCTTTGCATCAGGGTGTGCTATTGCTCCTTCTTCAAGTTTTaGTTCTCAGTCTCTAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETFLSLRGNALCIRVCYCSFFKF*FSVSKS Trigger: GCTTTTAGAGACTGAGAACAAAAACTTGAAGAAGGA...GCAATAGCACACCCTGATGCAAAGGGCATTCCCTCTAAGGCTTAAAAATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS TCA 90 bp | TCTGAGTTCTCAGTAGATCTTCTTTGGCCTTTTCAGCTGCCTGTTTaGAGTGCTTCAATTCCTTCTTCAAGTTTTTGTTCTCAGTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SEFSVDLLWPFQLPV*SASIPSSSFCSQSL Trigger: TAGAGACTGAGAACAAAAACTTGAAGAAGGAATTGAAGCACTTCAAACAGGCAGCTGAAAAGGCCAAAGAAGATCTACTGAGAACTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS TCA 90 bp | CGATCTCTTTCCAAAGAGGTCAGCATTTTCTCCTTCAATAAAGCATaGTGCTTCTCATGTAACACCCTTATAGTTGGTTCGTATGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLSKEVSIFSFNKA*CFSCNTLIVGSYDA Trigger: TGCATCATACGAACCAACTATAAGGGTGTTACATGAGAAGCATCATGCTTTATTGAAGGAGAAAATGCTGACCTCTTTGGAAAGAGATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GAATCATCGTCATCATTCATGGGTGATATAATTACTAACGAGAGAAATCCCACCCTATGTTCTTCAGTGTaGCTTGAAGCCCAGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: ESSSSFMGDIITNERNPTLCSSV*LEAQKS Trigger: AGATTTCTGGGCTTCAAGCAACACTGAAGAACATAG...GGTGGGATTTCTCTCGTTAGTAATTATATCACCCATGAATGATGACGATGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | ATTCTAAGCAATACACAACCGGAAGTAAAACCAAAGGCTTCAGTTTTAGATGAGGAGCTTGTTCTTTTCTaGCACTATGCGCTTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILSNTQPEVKPKASVLDEELVLF*HYALMM Trigger: CATCATAAGCGCATAGTGCAAGAAAAGAACAAGCTC...CTCATCTAAAACTGAAGCCTTTGGTTTTACTTCCGGTTGTGTATTGCTTAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | ATTCTAAGCAATACACAACCGGAAGTAAAACCAAAGGCTTCAGTTTTAGATGAGAGGTCAGCAATGAGCTaGTTCTTTTCTTGCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: ILSNTQPEVKPKASVLDERSAMS*FFSCTM Trigger: CATAGTGCAAGAAAAGAACAAGCTCATTGCTGACCT...CTCATCTAAAACTGAAGCCTTTGGTTTTACTTCCGGTTGTGTATTGCTTAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS-3UTR CAA 90 bp | GATCATTACACTCATGAATTTGTTGGTAAAACTCAAAAGTCCCACCACACATATAGGAAGAATGGTTTGTaGTTCCAAAATATGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: DHYTHEFVGKTQKSHHTYRKNGL*FQNMDV Trigger: GACATCCATATTTTGGAACAACAAACCATTCTTCCT...ATATGTGTGGTGGGACTTTTGAGTTTTACCAACAAATTCATGAGTGTAATGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
||
| CDS GCA 72 bp | CCGCCTCTGTCACCTCGCCGGTGGGTGACAAGCCAATaGCCAGCTCCTCCAGCACCCGCAGCGGCGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLSPRRWVTSQ*PAPPAPAAAGP Trigger: GGGTCCCGCCGCTGCGGGTGCTGGAGGAGCTGGGCATTGGCTTGTCACCCACCGGCGAGGTGACAGAGGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS CCA 72 bp | CGCCCTCGGAGGTCACCGCCTCTGTCACCTCGCCGGTaGGTGACAAGCCAATGCCCAGCTCCTCCAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: RPRRSPPLSPRR*VTSQCPAPPAP Trigger: GGGTGCTGGAGGAGCTGGGCATTGGCTTGTCACCCACCGGCGAGGTGACAGAGGCGGTGACCTCCGAGGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS TCA 72 bp | CTCGGAGGTCACCGCCTCTGTCACCTCGCCGGTGGGTaGCAAGCCAATGCCCAGCTCCTCCAGCACCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGGHRLCHLAGG*QANAQLLQHPQ Trigger: CTGCGGGTGCTGGAGGAGCTGGGCATTGGCTTGTCACCCACCGGCGAGGTGACAGAGGCGGTGACCTCCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS GCA 72 bp | AGGCAGAAGCCACGAAGTCACCACAGGAGTGCCAGGTaGAGGACCATACGGCATGGTTGTGTCCTTCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RQKPRSHHRSAR*RTIRHGCVLQG Trigger: CCCTTGAAGGACACAACCATGCCGTATGGTCCTGCACCTGGCACTCCTGTGGTGACTTCGTGGCTTCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CCA 72 bp | TCACCACAGGAGTGCCAGGTGCAGGACCATACGGCATaGTTGTGTCCTTCAAGGGTCAAGGTGCATTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SPQECQVQDHTA*LCPSRVKVHSP Trigger: AGGTGAATGCACCTTGACCCTTGAAGGACACAACCATGCCGTATGGTCCTGCACCTGGCACTCCTGTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS GCA 72 bp | GTCCCACAGCTTTGTAACTCCACGGGCATCACAGGATaGTATTATGTGACCCCTAGGCGTGAAGGTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: VPQLCNSTGITG*YYVTPRREGGI Trigger: GATGCCACCTTCACGCCTAGGGGTCACATAATAGCATCCTGTGATGCCCGTGGAGTTACAAAGCTGTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CCA 72 bp | CTCGGATGGAAGCAGCAGCCAGACAACCAATCAGTGTaGCCAGATCCTGTAAGAAGTACATTGCCCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGWKQQPDNQSV*PDPVRSTLPCG Trigger: CCCACAGGGCAATGTACTTCTTACAGGATCTGGCCACACTGATTGGTTGTCTGGCTGCTGCTTCCATCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS TCA 72 bp | CATATTCGCATTCATCTTCCGATGTTTCCGTTATGGTaGCCTGCTCCAGGTAGTAGGCGCCCTCGGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HIRIHLPMFPLW*PAPGSRRPRRS Trigger: TGACCTCCGAGGGCGCCTACTACCTGGAGCAGGTCACCATAACGGAAACATCGGAAGATGAATGCGAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS CAA 72 bp | AACCAATCAGTGTGGCCAGATCCTGTAAGAAGTACATaGCCCTGTGGGAGGCCCACCATCTTCCAGAGACGA | + |
|
Preference number: 6 (lower is better) Translates to: NQSVWPDPVRST*PCGRPTIFQRR Trigger: TCGTCTCTGGAAGATGGTGGGCCTCCCACAGGGCAATGTACTTCTTACAGGATCTGGCCACACTGATTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CAA 72 bp | AGTTTGATTGTGCTGTCACCACTTGAGGTAGCCAACTaGCTGCCACTCGGATGGAAGCAGCAGCCAGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLIVLSPLEVAN*LPLGWKQQPDN Trigger: GTTGTCTGGCTGCTGCTTCCATCCGAGTGGCAGCAAGTTGGCTACCTCAAGTGGTGACAGCACAATCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS CAA 90 bp | CAGCCAGACAACCAATCAGTGTGGCCAGATCCTGTAAGAAGTACATaGCCCTGTGGGAGGCCCACCATCTTCCAGAGACGATCTTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: QPDNQSVWPDPVRST*PCGRPTIFQRRSSL Trigger: TAGTGAAGATCGTCTCTGGAAGATGGTGGGCCTCCCACAGGGCAATGTACTTCTTACAGGATCTGGCCACACTGATTGGTTGTCTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CAA 90 bp | CACCACACTGTGCACTTCACTCTCGTGGCCCACCAGTTTGTGAATTaGCCCCGATTTAAGATCCAGCAAATGGATAATCCCGTTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: HHTVHFTLVAHQFVN*PRFKIQQMDNPVGT Trigger: AGTGCCAACGGGATTATCCATTTGCTGGATCTTAAATCGGGGCAAATTCACAAACTGGTGGGCCACGAGAGTGAAGTGCACAGTGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS TCA 72 bp | ACTGTTGACATCCCAGATTTTACTCGTCATATCCAGTaGGGCAGAAGCCACGAAGTCACCACAGGAGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVDIPDFTRHIQ*GRSHEVTTGVP Trigger: TGGCACTCCTGTGGTGACTTCGTGGCTTCTGCCTCACTGGATATGACGAGTAAAATCTGGGATGTCAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS TCA 72 bp | AGATCCAGCAAATGGATAATCCCGTTGGCACTCGCCTaGGCTAAAACTCGACCTGACTGGTCAAAGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: RSSKWIIPLALA*AKTRPDWSKFT Trigger: GGTGAACTTTGACCAGTCAGGTCGAGTTTTAGCTCAGGCGAGTGCCAACGGGATTATCCATTTGCTGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CAA 72 bp | GGTCTTCGGTGGTCTTTTTCTGAGTGTCCCTGTACTTaGCTCTCTTGTGCTAATGGAGCCCTGTTGAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLRWSFSECPCT*LSCANGALLRC Trigger: ACACCTCAACAGGGCTCCATTAGCACAAGAGAGCAAAGTACAGGGACACTCAGAAAAAGACCACCGAAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS TCA 72 bp | CCTGGCTTCACGAAGACTTTTCTGAGTTGGGCCCTCTaGACTGTTTTCTTTCTCACAACTGTGACCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGFTKTFLSWAL*TVFFLTTVTSS Trigger: AGAGCTGGTCACAGTTGTGAGAAAGAAAACAGTTCAGAGGGCCCAACTCAGAAAAGTCTTCGTGAAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS TCA 72 bp | TTTGTAACTCCACGGGCATCACAGGATGCTATTATGTaGCCCCTAGGCGTGAAGGTGGCATCATTGACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FVTPRASQDAIM*PLGVKVASLTE Trigger: TTCTGTCAATGATGCCACCTTCACGCCTAGGGGTCACATAATAGCATCCTGTGATGCCCGTGGAGTTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS CAA 72 bp | GTGCACTTCACTCTCGTGGCCCACCAGTTTGTGAATTaGCCCCGATTTAAGATCCAGCAAATGGATAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: VHFTLVAHQFVN*PRFKIQQMDNP Trigger: GGGATTATCCATTTGCTGGATCTTAAATCGGGGCAAATTCACAAACTGGTGGGCCACGAGAGTGAAGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS CAA 90 bp | CATACGGCATGGTTGTGTCCTTCAAGGGTCAAGGTGCATTCACCTTaGTTGAGGTCCCATAGTTTGATTGTGCTGTCACCACTTGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HTAWLCPSRVKVHSP*LRSHSLIVLSPLEV Trigger: TACCTCAAGTGGTGACAGCACAATCAAACTATGGGACCTCAACAAAGGTGAATGCACCTTGACCCTTGAAGGACACAACCATGCCGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS CAA 90 bp | TACCACTCGGCCTGGAAGCAGTCCAGAGTTCTGGTCATCCCCATTTaGATCAGGAAATTGCAGAGAAAATCTTCTATGGCTTCCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: YHSAWKQSRVLVIPI*IRKLQRKSSMASCI Trigger: AATGCAGGAAGCCATAGAAGATTTTCTCTGCAATTTCCTGATCAAAATGGGGATGACCAGAACTCTGGACTGCTTCCAGGCCGAGTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 90 bp | GAGACAAGAGGTCTTCGGTGGTCTTTTTCTGAGTGTCCCTGTACTTaGCTCTCTTGTGCTAATGGAGCCCTGTTGAGGTGTGATCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: ETRGLRWSFSECPCT*LSCANGALLRCDLI Trigger: AATAAGATCACACCTCAACAGGGCTCCATTAGCACAAGAGAGCAAAGTACAGGGACACTCAGAAAAAGACCACCGAAGACCTCTTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS TCA 72 bp | GTTGGGCCCTCTGAACTGTTTTCTTTCTCACAACTGTaGCCAGCTCTGTCTCCTGACTCTCTTGTGATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGPSELFSFSQL*PALSPDSLVIE Trigger: TTCTATCACAAGAGAGTCAGGAGACAGAGCTGGTCACAGTTGTGAGAAAGAAAACAGTTCAGAGGGCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS TCA 72 bp | CTAGGCGTGAAGGTGGCATCATTGACAGAATGCATGTaGCCATACAGAGACTGCTCACATTTACCTGTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LGVKVASLTECM*PYRDCSHLPVR Trigger: ACGAACAGGTAAATGTGAGCAGTCTCTGTATGGTCACATGCATTCTGTCAATGATGCCACCTTCACGCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS TCA 72 bp | ACACTGTGCACTTCACTCTCGTGGCCCACCAGTTTGTaGATTTGCCCCGATTTAAGATCCAGCAAATGGATA | + |
|
Preference number: 6 (lower is better) Translates to: TLCTSLSWPTSL*ICPDLRSSKWI Trigger: TATCCATTTGCTGGATCTTAAATCGGGGCAAATTCACAAACTGGTGGGCCACGAGAGTGAAGTGCACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS TCA 72 bp | AGGTGTGATCTTATTCCAAGTTGGAAAGTTCCCTCTTaGCTGCTGCTGATGGAAGGAAGGAGTTGGGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RCDLIPSWKVPS*LLLMEGRSWVE Trigger: CTCTACCCAACTCCTTCCTTCCATCAGCAGCAGTCAAGAGGGAACTTTCCAACTTGGAATAAGATCACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS CCA 72 bp | CTTCCTTTCTTCTGTATTAACTCATACCACTCGGCCTaGAAGCAGTCCAGAGTTCTGGTCATCCCCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPFFCINSYHSA*KQSRVLVIPIL Trigger: CAAAATGGGGATGACCAGAACTCTGGACTGCTTCCAGGCCGAGTGGTATGAGTTAATACAGAAGAAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CCA 72 bp | ATTTCCCGAACTTGGACCCACATCAATGGACACGATTaGAATGAGTTTCCGGAAGTCCCACAGCTTTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: ISRTWTHINGHD*NEFPEVPQLCN Trigger: GTTACAAAGCTGTGGGACTTCCGGAAACTCATTCCAATCGTGTCCATTGATGTGGGTCCAAGTTCGGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS CAA 72 bp | CAGCCCTTTGAGGTCAGCAATGAGCTTGTTCTTTTCTaGCACTATGCGCTTATGATGCATGCGATGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPFEVSNELVLF*HYALMMHAMEV Trigger: GACTTCCATCGCATGCATCATAAGCGCATAGTGCAAGAAAAGAACAAGCTCATTGCTGACCTCAAAGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 72 bp | GTCAAGGTGCATTCACCTTTGTTGAGGTCCCATAGTTaGATTGTGCTGTCACCACTTGAGGTAGCCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VKVHSPLLRSHS*IVLSPLEVANL Trigger: CAAGTTGGCTACCTCAAGTGGTGACAGCACAATCAAACTATGGGACCTCAACAAAGGTGAATGCACCTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS CAA 72 bp | TGGTTGTGTCCTTCAAGGGTCAAGGTGCATTCACCTTaGTTGAGGTCCCATAGTTTGATTGTGCTGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: WLCPSRVKVHSP*LRSHSLIVLSP Trigger: TGGTGACAGCACAATCAAACTATGGGACCTCAACAAAGGTGAATGCACCTTGACCCTTGAAGGACACAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS CAA 90 bp | ATGCAATTTCAGCCCTTTGAGGTCAGCAATGAGCTTGTTCTTTTCTaGCACTATGCGCTTATGATGCATGCGATGGAAGTCCCGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MQFQPFEVSNELVLF*HYALMMHAMEVPFL Trigger: AAGGAACGGGACTTCCATCGCATGCATCATAAGCGCATAGTGCAAGAAAAGAACAAGCTCATTGCTGACCTCAAAGGGCTGAAATTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS GCA 72 bp | GCTTGTTCTTTTCTTGCACTATGCGCTTATGATGCATaGGATGGAAGTCCCGTTCCTTCTGAGTTCTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ACSFLALCAYDA*DGSPVPSEFSV Trigger: TACTGAGAACTCAGAAGGAACGGGACTTCCATCGCATGCATCATAAGCGCATAGTGCAAGAAAAGAACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CCA 72 bp | CCATATGAGACTCTGTTGGACTCGGTTGGACCCTCTTaGACTCTGTTGAAGATGGCTTTTTCTCATTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PYETLLDSVGPS*TLLKMAFSHSS Trigger: TGAAGAATGAGAAAAAGCCATCTTCAACAGAGTCCAAGAGGGTCCAACCGAGTCCAACAGAGTCTCATATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS CAA 72 bp | CAACTTCTTCCCTGGCTTCACGAAGACTTTTCTGAGTaGGGCCCTCTGAACTGTTTTCTTTCTCACAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLLPWLHEDFSE*GPLNCFLSHNC Trigger: ACAGTTGTGAGAAAGAAAACAGTTCAGAGGGCCCAACTCAGAAAAGTCTTCGTGAAGCCAGGGAAGAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 90 bp | ATTTATATCCAACTTCTTCCCTGGCTTCACGAAGACTTTTCTGAGTaGGGCCCTCTGAACTGTTTTCTTTCTCACAACTGTGACCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IYIQLLPWLHEDFSE*GPLNCFLSHNCDQL Trigger: GAGCTGGTCACAGTTGTGAGAAAGAAAACAGTTCAGAGGGCCCAACTCAGAAAAGTCTTCGTGAAGCCAGGGAAGAAGTTGGATATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS TCA 72 bp | TATCCAACTTCTTCCCTGGCTTCACGAAGACTTTTCTaGGTTGGGCCCTCTGAACTGTTTTCTTTCTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: YPTSSLASRRLF*VGPSELFSFSQ Trigger: TTGTGAGAAAGAAAACAGTTCAGAGGGCCCAACTCAGAAAAGTCTTCGTGAAGCCAGGGAAGAAGTTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS GCA 72 bp | AACCTGAATATGTCCCATGTCTATGTTCTTCAGTGTTaGTTGAAGCCCAGAAATCTTCCCAACAGCTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: NLNMSHVYVLQC*LKPRNLPNSSI Trigger: GATCGAGCTGTTGGGAAGATTTCTGGGCTTCAAGCAACACTGAAGAACATAGACATGGGACATATTCAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 72 bp | GAACCTGAATATGTCCCATGTCTATGTTCTTCAGTGTaGCTTGAAGCCCAGAAATCTTCCCAACAGCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: EPEYVPCLCSSV*LEAQKSSQQLD Trigger: ATCGAGCTGTTGGGAAGATTTCTGGGCTTCAAGCAACACTGAAGAACATAGACATGGGACATATTCAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 90 bp | TACAGGAACCTGAATATGTCCCATGTCTATGTTCTTCAGTGTTGCTaGAAGCCCAGAAATCTTCCCAACAGCTCGATCTCTTTCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: YRNLNMSHVYVLQCC*KPRNLPNSSISFQR Trigger: TCTTTGGAAAGAGATCGAGCTGTTGGGAAGATTTCTGGGCTTCAAGCAACACTGAAGAACATAGACATGGGACATATTCAGGTTCCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 72 bp | ACTCTGTTGGACTCGGTTGGACCCTCTTGGACTCTGTaGAAGATGGCTTTTTCTCATTCTTCAACTTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: TLLDSVGPSWTL*KMAFSHSSTLI Trigger: AATCAAAGTTGAAGAATGAGAAAAAGCCATCTTCAACAGAGTCCAAGAGGGTCCAACCGAGTCCAACAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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| CDS CAA 90 bp | TTCTATGGCTTCCTGCATTACATTCCTTGCAGGAAGAATGGTTTGTaGTTCCAAAATATGGATGTCTCTGGCTTGCTCTCCAATGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: FYGFLHYIPCRKNGL*FQNMDVSGLLSNDV Trigger: CACATCATTGGAGAGCAAGCCAGAGACATCCATATTTTGGAACAACAAACCATTCTTCCTGCAAGGAATGTAATGCAGGAAGCCATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 90 bp | TGCAGGAAGAATGGTTTGTTGTTCCAAAATATGGATGTCTCTGGCTaGCTCTCCAATGATGTGAATTGCTTTTTCCAGATCTTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRKNGLLFQNMDVSG*LSNDVNCFFQIFFS Trigger: GGAGAAGAAGATCTGGAAAAAGCAATTCACATCATTGGAGAGCAAGCCAGAGACATCCATATTTTGGAACAACAAACCATTCTTCCTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 90 bp | ATCTTCTATGGCTTCCTGCATTACATTCCTTGCAGGAAGAATGGTTaGTTGTTCCAAAATATGGATGTCTCTGGCTTGCTCTCCAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: IFYGFLHYIPCRKNG*LFQNMDVSGLLSND Trigger: ATCATTGGAGAGCAAGCCAGAGACATCCATATTTTGGAACAACAAACCATTCTTCCTGCAAGGAATGTAATGCAGGAAGCCATAGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS TCA 72 bp | AAAATATGGATGTCTCTGGCTTGCTCTCCAATGATGTaGATTGCTTTTTCCAGATCTTCTTCTCCTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KIWMSLACSPMM*IAFSRSSSPSG Trigger: TCCTGAAGGAGAAGAAGATCTGGAAAAAGCAATTCACATCATTGGAGAGCAAGCCAGAGACATCCATATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS TCA 72 bp | TCCAAAGAGGTCAGCATTTTCTCCTTCAATAAAGCATaGTGCTTCTCATGTAACACCCTTATAGTTGGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SKEVSIFSFNKA*CFSCNTLIVGS Trigger: CGAACCAACTATAAGGGTGTTACATGAGAAGCATCATGCTTTATTGAAGGAGAAAATGCTGACCTCTTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS TCA 72 bp | GTAGTCAAATTTTGCTGCAGAAACGTTTTCTGTACATaGAGTCACGTTTGGATCTGGTTGCATATCTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VVKFCCRNVFCT*SHVWIWLHIYR Trigger: CCTGTAGATATGCAACCAGATCCAAACGTGACTTCATGTACAGAAAACGTTTCTGCAGCAAAATTTGACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
||
| CDS GCA 72 bp | AGATCTTCTTTGGCCTTTTCAGCTGCCTGTTTGAAGTaGTTCAATTCCTTCTTCAAGTTTTTGTTCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSLAFSAACLK*FNSFFKFLFSV Trigger: GACTGAGAACAAAAACTTGAAGAAGGAATTGAAGCACTTCAAACAGGCAGCTGAAAAGGCCAAAGAAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS CAA 72 bp | CTCAGTAGATCTTCTTTGGCCTTTTCAGCTGCCTGTTaGAAGTGCTTCAATTCCTTCTTCAAGTTTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSRSSLAFSAAC*KCFNSFFKFLF Trigger: GAACAAAAACTTGAAGAAGGAATTGAAGCACTTCAAACAGGCAGCTGAAAAGGCCAAAGAAGATCTACTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
||
| CDS CAA 72 bp | AATGGTTTGTTGTTCCAAAATATGGATGTCTCTGGCTaGCTCTCCAATGATGTGAATTGCTTTTTCCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: NGLLFQNMDVSG*LSNDVNCFFQI Trigger: GATCTGGAAAAAGCAATTCACATCATTGGAGAGCAAGCCAGAGACATCCATATTTTGGAACAACAAACCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065425.12 ENSMUST00000113940.4 |
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| CDS CAA 72 bp | TTGCTGCAGAAACGTTTTCTGTACATGAAGTCACGTTaGGATCTGGTTGCATATCTACAGGAAATTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LLQKRFLYMKSR*DLVAYLQEILN Trigger: ATTCAGAATTTCCTGTAGATATGCAACCAGATCCAAACGTGACTTCATGTACAGAAAACGTTTCTGCAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065425.12 |
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| CDS CAA 72 bp | ACTCTGTTGAAGATGGCTTTTTCTCATTCTTCAACTTaGATTTATATCCAACTTCTTCCCTGGCTTCACGAA | + |
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Preference number: 6 (lower is better) Translates to: TLLKMAFSHSST*IYIQLLPWLHE Trigger: TTCGTGAAGCCAGGGAAGAAGTTGGATATAAATCAAAGTTGAAGAATGAGAAAAAGCCATCTTCAACAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113940.4 |
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