Pregenerated sensors for SPAG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037617Ensembl transcript IDs: ENSMUST00000047348.11, ENSMUST00000171205.3
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCAAACAGGGATCCTTCTaGGTGTGGCTTTACCCATGC | + |
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Preference number: 2 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVKQGSF*VWLYPC Trigger: GCATGGGTAAAGCCACACCCAGAAGGATCCCTGTTT...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGTGTGGCTTTACCCATaGAACTGCATCACAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTVWLYP*NCITMF Trigger: AAACATTGTGATGCAGTTGCATGGGTAAAGCCACAC...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| 3UTR-3UTR GCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCCTGCATCACAATGTTTaGTGTCTTGAACTCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVLHHNV*CLELSN Trigger: GTTGCTGAGTTCAAGACAGCAAACATTGTGATGCAG...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTGCATCACAATGTTTaGTGTCTTGAACTCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: IKISTTSDVQTGILLGVALHHNV*CLELSN Trigger: GTTGCTGAGTTCAAGACAGCAAACATTGTGATGCAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| 3UTR GCA 72 bp | TCCAAACAGGGATCCTTCTGGGTGTGGCTTTACCCATaGAACTGCATCACAATGTTTGCTGTCTTGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: SKQGSFWVWLYP*NCITMFAVLNS Trigger: TGAGTTCAAGACAGCAAACATTGTGATGCAGTTGCATGGGTAAAGCCACACCCAGAAGGATCCCTGTTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTCTCGCAGGCCTCCCTaGTGCTCAGCTCGGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVASRRPP*CSARGP Trigger: GGGGCCCCGAGCTGAGCAGCAGGGAGGCCTGCGAGA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCGTTGCCCCGTCTCTTaGGGCCGCTGGGGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVARCPVS*GRWGCQ Trigger: CTGACAACCCCAGCGGCCTCAAGAGACGGGGCAACG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTGTGAGGGCAGCAGGTaGAGCCGCGGACAGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVACEGSR*SRGQEA Trigger: TGCCTCCTGTCCGCGGCTCCACCTGCTGCCCTCACA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCGTTTCCTTGCCACTGTaGGGGCAGCAGGTGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVVSLPL*GQQVEP Trigger: CGGCTCCACCTGCTGCCCTCACAGTGGCAAGGAAAC...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGTTTCCTTGCCACTGTaGGGGCAGCAGGTGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAVSLPL*GQQVEP Trigger: CGGCTCCACCTGCTGCCCTCACAGTGGCAAGGAAAC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTGGGCTTAGGAGGACTTaGCTGGGGTCCACCCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESGLRRT*LGSTPL Trigger: AAGCGGGGTGGACCCCAGTCAAGTCCTCCTAAGCCC...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGGGCTTAGGAGGACTTaGCTGGGGTCCACCCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAGLRRT*LGSTPL Trigger: AAGCGGGGTGGACCCCAGTCAAGTCCTCCTAAGCCC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR GCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCTTGTCCGGCTCCACCTaGAGCACCTTTCTCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICLSGST*STFLRS Trigger: CGACCTGAGAAAGGTGCTGCAGGTGGAGCCGGACAA...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR TCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCACCATCAGCTTCTTCTaGATGTTGCCCATGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICTISFF*MLPMAA Trigger: GGCGGCCATGGGCAACATTCAGAAGAAGCTGATGGT...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCCAGGCTCCTCATCACTaGTGCCATCCACCTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICQAPHH*CHPPLG Trigger: TCCAAGAGGTGGATGGCAGCAGTGATGAGGAGCCTG...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCGGTAGCAGAGGCCTCTaGAGGTCTCTCAGGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVGSRGL*RSLRLL Trigger: GAGGAGCCTGAGAGACCTGCAGAGGCCTCTGCTACC...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGGTAGCAGAGGCCTCTaGAGGTCTCTCAGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAGSRGL*RSLRLL Trigger: GAGGAGCCTGAGAGACCTGCAGAGGCCTCTGCTACC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCGTCGGACTGTGTGTCTaGCAGACCATCAAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICVGLCV*QTIKQL Trigger: CAGCTGTTTGATGGTCTGTCAGACACACAGTCCGAC...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGCTGGATGCTGTCTCTaGAGGCTTGTCCTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTAGCCL*RLVLPQ Trigger: CTGAGGAAGGACAAGCCTGCAGAGACAGCATCCAGC...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTGTCCGGCTCCACCTaGAGCACCTTTCTCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVALSGST*STFLRS Trigger: CGACCTGAGAAAGGTGCTGCAGGTGGAGCCGGACAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTATCGCCACCGAGTATTaGGCGGCTGCCTCTGCGAAT | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAIATEY*AAASAN Trigger: ATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGAT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGCAGTGGCTCAGATGTaGGTACAGCTGGGATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAAVAQM*VQLGWV Trigger: CACCCATCCCAGCTGTACCCACATCTGAGCCACTGC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTACAGGGATCTTGGTCTaGGGTCTCTGCAGCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVATGILV*GLCSRE Trigger: CTCCCTGCTGCAGAGACCCCAGACCAAGATCCCTGT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTACCATCAGCTTCTTCTaGATGTTGCCCATGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVATISFF*MLPMAA Trigger: GGCGGCCATGGGCAACATTCAGAAGAAGCTGATGGT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCGGTCTTTGGGTGCAGTaGTGGCTAAAAGATGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICGLWVQ*WLKDVH Trigger: GTGCACATCTTTTAGCCATCACTGCACCCAAAGACC...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGCTGGATGCTGTCTCTaGAGGCTTGTCCTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAAGCCL*RLVLPQ Trigger: CTGAGGAAGGACAAGCCTGCAGAGACAGCATCCAGC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR GCA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGCTCCTCATCACTGCTaGCATCCACCTCTTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTAPHHC*HPPLGL Trigger: AAGTCCAAGAGGTGGATGGCAGCAGTGATGAGGAGC...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCAGGCTCCTCATCACTaGTGCCATCCACCTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAQAPHH*CHPPLG Trigger: TCCAAGAGGTGGATGGCAGCAGTGATGAGGAGCCTG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR CCA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACACTTCCGCTGAAAAGCTaGATGCTGTCTCTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTLPLKS*MLSLQA Trigger: AGCCTGCAGAGACAGCATCCAGCTTTTCAGCGGAAG...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTTACAGCTGGGATGGGTaGCAGTCTCTCCCGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESYSWDG*QSLPPF Trigger: AAATGGCGGGAGAGACTGCCACCCATCCCAGCTGTA...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTACAGCTGGGATGGGTaGCAGTCTCTCCCGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAYSWDG*QSLPPF Trigger: AAATGGCGGGAGAGACTGCCACCCATCCCAGCTGTA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTAGATGTGGGTACAGCTaGGATGGGTGGCAGTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESRCGYS*DGWQSL Trigger: GAGAGACTGCCACCCATCCCAGCTGTACCCACATCT...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTAGATGTGGGTACAGCTaGGATGGGTGGCAGTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVARCGYS*DGWQSL Trigger: GAGAGACTGCCACCCATCCCAGCTGTACCCACATCT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTTTGGGACAGGGATCTTaGTCTGGGGTCTCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESLGQGS*SGVSAA Trigger: TGCTGCAGAGACCCCAGACCAAGATCCCTGTCCCAA...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTGGGACAGGGATCTTaGTCTGGGGTCTCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVALGQGS*SGVSAA Trigger: TGCTGCAGAGACCCCAGACCAAGATCCCTGTCCCAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR CCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCGCGCTAGTCTGTGGCTaGCTTTCACATTCTCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVALVCG*LSHSRR Trigger: ACGGCGAGAATGTGAAAGCCAGCCACAGACTAGCGC...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGCGCTAGTCTGTGGCTaGCTTTCACATTCTCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAALVCG*LSHSRR Trigger: ACGGCGAGAATGTGAAAGCCAGCCACAGACTAGCGC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTTTCCCACTCTTCCGCTaGAAAGCTGGATGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESFPLFR*KAGCCL Trigger: GAGACAGCATCCAGCTTTTCAGCGGAAGAGTGGGAA...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTCCCACTCTTCCGCTaGAAAGCTGGATGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAFPLFR*KAGCCL Trigger: GAGACAGCATCCAGCTTTTCAGCGGAAGAGTGGGAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGTCGGACTGTGTGTCTaGCAGACCATCAAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAVGLCV*QTIKQL Trigger: CAGCTGTTTGATGGTCTGTCAGACACACAGTCCGAC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTCACAGTCCAGCTTTaGCTCTTCAAACTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVALTVQL*LFKLAQ Trigger: CTGGGCCAGTTTGAAGAGGCAAAGCTGGACTGTGAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR GCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCTCCTCTCCCTTCCTTTaGTGGGAGGTGCTGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVSSPFL*WEVLCH Trigger: ATGACACAGCACCTCCCAGCAAAGGAAGGGAGAGGA...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTCCTCTCCCTTCCTTTaGTGGGAGGTGCTGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVASSPFL*WEVLCH Trigger: ATGACACAGCACCTCCCAGCAAAGGAAGGGAGAGGA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGCTCCTCATCACTGCTaGCATCCACCTCTTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAAPHHC*HPPLGL Trigger: AAGTCCAAGAGGTGGATGGCAGCAGTGATGAGGAGC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCTTTTTCTGCTGGTTCTaGAGACCCTCCATCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICFFCWF*RPSIFH Trigger: GTGGAAGATGGAGGGTCTGCAGAACCAGCAGAAAAA...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGACGTCGAGTTTTTCTaGTGGTTCTGCAGACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVADVEFF*WFCRPS Trigger: GGAGGGTCTGCAGAACCAGCAGAAAAACTCGACGTC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCCTCAGATACAGGAGATaGTCATACACCAGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVLRYRR*SYTREG Trigger: CCCCTCCCTGGTGTATGAGCATCTCCTGTATCTGAG...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTCAGATACAGGAGATaGTCATACACCAGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVALRYRR*SYTREG Trigger: CCCCTCCCTGGTGTATGAGCATCTCCTGTATCTGAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAAGACCATCAAACAGCTaGGCCATCTGCTCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTRPSNS*AICSFW Trigger: CCAAAAGGAGCAGATGGCGCAGCTGTTTGATGGTCT...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTTCCGCTGAAAAGCTaGATGCTGTCTCTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVALPLKS*MLSLQA Trigger: AGCCTGCAGAGACAGCATCCAGCTTTTCAGCGGAAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTATAGGCAATGGCGGTaGGAAGGGCTGATAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAYRQWR*EGLISS Trigger: GGAGCTTATCAGCCCTTCCCACCGCCATTGCCTATA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGCCCTGTTACAATCCTaGATGCAGTCCCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAALLQS*MQSLQF Trigger: GAACTGCAGGGACTGCATCCAGGATTGTAACAGGGC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR TCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCTCCAAAGCCCCACAATaGTGGACAGTCCTTAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVSKAPQ*WTVLSL Trigger: AAGGCTAAGGACTGTCCATCATTGTGGGGCTTTGGA...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTCCAAAGCCCCACAATaGTGGACAGTCCTTAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVASKAPQ*WTVLSL Trigger: AAGGCTAAGGACTGTCCATCATTGTGGGGCTTTGGA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACATTCACTGAGAACGGATaGAGTTCCAGAGCCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTFTENG*SSRALL Trigger: TAACAGGGCTCTGGAACTTCATCCGTTCTCAGTGAA...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCAGAAGAGGCTTCACTaGGAACGGATGAAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAQKRLH*ERMKFQ Trigger: CTGGAACTTCATCCGTTCTCAGTGAAGCCTCTTCTG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGGTCTTTGGGTGCAGTaGTGGCTAAAAGATGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAGLWVQ*WLKDVH Trigger: GTGCACATCTTTTAGCCATCACTGCACCCAAAGACC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCATCTTCACGCTCATCTaGGCTTCCCTTTCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVIFTLI*ASLSTF Trigger: GAAGGTGGAAAGGGAAGCGCAGATGAGCGTGAAGAT...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTATCTTCACGCTCATCTaGGCTTCCCTTTCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAIFTLI*ASLSTF Trigger: GAAGGTGGAAAGGGAAGCGCAGATGAGCGTGAAGAT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCCGTCTTAAACCTCTCTaGTTTGCTCAGATACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICRLKPL*FAQIQE Trigger: CTCCTGTATCTGAGCAAAGCAGAGAGGTTTAAGACG...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR GCA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAAACAGCTGCGCCATCTaGTCCTTTTGGCCTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTNSCAI*SFWPLL Trigger: TAACAAAGGCCAAAAGGAGCAGATGGCGCAGCTGTT...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTAGACCATCAAACAGCTaGGCCATCTGCTCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVARPSNS*AICSFW Trigger: CCAAAAGGAGCAGATGGCGCAGCTGTTTGATGGTCT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCCTCTTCCCTTTGGTTTaGAGCTCAGAGACAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVLFPLV*SSETGS Trigger: AGAGCCTGTCTCTGAGCTCCAAACCAAAGGGAAGAG...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTCTTCCCTTTGGTTTaGAGCTCAGAGACAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVALFPLV*SSETGS Trigger: AGAGCCTGTCTCTGAGCTCCAAACCAAAGGGAAGAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTTCTCCCTTCCTTTGCTaGGAGGTGCTGTGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESSPFLC*EVLCHS Trigger: AGAATGACACAGCACCTCCCAGCAAAGGAAGGGAGA...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTCTCCCTTCCTTTGCTaGGAGGTGCTGTGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVASPFLC*EVLCHS Trigger: AGAATGACACAGCACCTCCCAGCAAAGGAAGGGAGA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTCACTGAGAACGGATaGAGTTCCAGAGCCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAFTENG*SSRALL Trigger: TAACAGGGCTCTGGAACTTCATCCGTTCTCAGTGAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCAAGGTGACTTTTAAGTaGCTGAATGAGGAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICKVTFK*LNEEEE Trigger: TTCCTCCTCCTCATTCAGTCACTTAAAAGTCACCTT...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTGTTACAATCCTGGATaGAGTCCCTGCAGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVACYNPG*SPCSSL Trigger: AAGGGAACTGCAGGGACTGCATCCAGGATTGTAACA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTTTTCTGCTGGTTCTaGAGACCCTCCATCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAFFCWF*RPSIFH Trigger: GTGGAAGATGGAGGGTCTGCAGAACCAGCAGAAAAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTAACAGCTGCGCCATCTaGTCCTTTTGGCCTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVANSCAI*SFWPLL Trigger: TAACAAAGGCCAAAAGGAGCAGATGGCGCAGCTGTT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTGATTGTTATAGGCAATaGCGGTGGGAAGGGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESDCYRQ*RWEGLI Trigger: TATCAGCCCTTCCCACCGCCATTGCCTATAACAATC...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGATTGTTATAGGCAATaGCGGTGGGAAGGGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVADCYRQ*RWEGLI Trigger: TATCAGCCCTTCCCACCGCCATTGCCTATAACAATC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCGTCTTAAACCTCTCTaGTTTGCTCAGATACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVARLKPL*FAQIQE Trigger: CTCCTGTATCTGAGCAAAGCAGAGAGGTTTAAGACG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCTTCTGCATAATCCCTTaGAATCCTCTTCTTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVHLSGTESDGVATANICFCIIP*NPLLSC Trigger: ACAGCTAAGAAGAGGATTCCAAGGGATTATGCAGAA...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR TCA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCTCAGGGTCATGGAAGTaGCATGTATTTTCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVSGSWK*HVFSSL Trigger: AAGAGAGGAAAATACATGTCACTTCCATGACCCTGA...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTAAGGTGACTTTTAAGTaGCTGAATGAGGAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAKVTFK*LNEEEE Trigger: TTCCTCCTCCTCATTCAGTCACTTAAAAGTCACCTT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR TCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTCCTGGAGCTTGTTTTaGTGTTTATATGTAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVASWSLF*CLYVVA Trigger: AGCCACTACATATAAACATCAAAACAAGCTCCAGGA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTCTTCTCAGTCAGACCTaGTGTTTCTATTTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVSHFSKVDFVHLSGTESLLSQT*CFYFCL Trigger: GAGACAAAAATAGAAACAGCAGGTCTGACTGAGAAG...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTTCTCAGTCAGACCTaGTGTTTCTATTTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVALLSQT*CFYFCL Trigger: GAGACAAAAATAGAAACAGCAGGTCTGACTGAGAAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTCTGCATAATCCCTTaGAATCCTCTTCTTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAFCIIP*NPLLSC Trigger: ACAGCTAAGAAGAGGATTCCAAGGGATTATGCAGAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTAAATTTATCCCATTCTaGATAATCCCTTGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKISTTSDVQTGILLGVAKFIPF*IIPWNP Trigger: AGGATTCCAAGGGATTATGCAGAATGGGATAAATTT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | AGCTGCGCTATCGCCACCGAGTATTGCGCGGCTGCCTCTGCGAATTaGCCGCCGCGGAACAGCTCGTTGCCCCGTCTCTTGAGGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCAIATEYCAAASAN*PPRNSSLPRLLRPL Trigger: CAGCGGCCTCAAGAGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS TCA 90 bp | CGCGACCGCCTGCCACCCTCGCTCCGGCGGACCATCAGCTTCTTCTaGATGTTGCCCATGGCCGCCTCATCCGAGCCACCATCTTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: RDRLPPSLRRTISFF*MLPMAASSEPPSSR Trigger: GCGTGAAGATGGTGGCTCGGATGAGGCGGCCATGGGCAACATTCAGAAGAAGCTGATGGTCCGCCGGAGCGAGGGTGGCAGGCGGTCGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | GGGTTCCAGCTGCGCTATCGCCACCGAGTATTGCGCGGCTGCCTCTaGGAATTGCCCGCCGCGGAACAGCTCGTTGCCCCGTCTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GFQLRYRHRVLRGCL*ELPAAEQLVAPSLE Trigger: CTCAAGAGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAGCTGGAACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | TCCTGTGGGTTCCAGCTGCGCTATCGCCACCGAGTATTGCGCGGCTaGCTCTGCGAATTGCCCGCCGCGGAACAGCTCGTTGCCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCGFQLRYRHRVLRG*LCELPAAEQLVAPS Trigger: AGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAGCTGGAACCCACAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | TTTGCACTTCCTGTGGGTTCCAGCTGCGCTATCGCCACCGAGTATTaGGCGGCTGCCTCTGCGAATTGCCCGCCGCGGAACAGCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FALPVGSSCAIATEY*AAASANCPPRNSSL Trigger: CAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAGCTGGAACCCACAGGAAGTGCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS CCA 90 bp | CACCCTCGCTCCGGCGGACCATCAGCTTCTTCTGAATGTTGCCCATaGCCGCCTCATCCGAGCCACCATCTTCACGCTCATCTGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HPRSGGPSASSECCP*PPHPSHHLHAHLRF Trigger: GAAGCGCAGATGAGCGTGAAGATGGTGGCTCGGATGAGGCGGCCATGGGCAACATTCAGAAGAAGCTGATGGTCCGCCGGAGCGAGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | CTCTTGGACTTGGATTCTCCTCCTCTCCCTTCCTTTGCTGGGAGGTaGTGTGTCATTCTTAGTGTCCAGGTGCCGGGCGGCTTCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLDLDSPPLPSFAGR*CVILSVQVPGGFTG Trigger: TCCAGTGAAGCCGCCCGGCACCTGGACACTAAGAATGACACAGCACCTCCCAGCAAAGGAAGGGAGAGGAGGAGAATCCAAGTCCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS CCA 90 bp | CAGGGAGCCAAACTCGCAGTGGCTCAGATGTGGGTACAGCTGGGATaGGTGGCAGTCTCTCCCGCCATTTTGATCCATCTAGCTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QGAKLAVAQMWVQLG*VAVSPAILIHLALL Trigger: TAACAGAGCTAGATGGATCAAAATGGCGGGAGAGACTGCCACCCATCCCAGCTGTACCCACATCTGAGCCACTGCGAGTTTGGCTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | ACCTCTGATAAGGTCTTCTTGGCCAAGTCGTTGTCCGGCTCCACCTaGAGCACCTTTCTCAGGTCGTCCACAGCTTCCTGGAGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSDKVFLAKSLSGST*STFLRSSTASWSLF Trigger: AAACAAGCTCCAGGAAGCTGTGGACGACCTGAGAAAGGTGCTGCAGGTGGAGCCGGACAACGACTTGGCCAAGAAGACCTTATCAGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | CACATTCTCGCCGTCTATCTGAAGCGCCTGCTCACAGTCCAGCTTTaGCTCTTCAAACTGGCCCAGCTTCAGGTAACAGAGAGCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HILAVYLKRLLTVQL*LFKLAQLQVTESPV Trigger: AACAGGGCTCTCTGTTACCTGAAGCTGGGCCAGTTTGAAGAGGCAAAGCTGGACTGTGAGCAGGCGCTTCAGATAGACGGCGAGAATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCCCGCGGAACAGCTCGTaGCCCCGTCTCTTGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVPRNSS*PRLLRP Trigger: CGGCCTCAAGAGACGGGGCAACGAGCTGTTCCGCGG...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCCGCGGAACAGCTCGTaGCCCCGTCTCTTGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAPRNSS*PRLLRP Trigger: CGGCCTCAAGAGACGGGGCAACGAGCTGTTCCGCGG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCGGCTGCCTCTGCGAATaGCCCGCCGCGGAACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVGCLCE*PAAEQL Trigger: GAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCC...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGGCTGCCTCTGCGAATaGCCCGCCGCGGAACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAGCLCE*PAAEQL Trigger: GAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS TCA 90 bp | AGGCCTTCTCACAGTCTTCAAGAGCACTGCTCCATCTCTGCAACTTaGTTTCGGCCTGAGCTCGATTGTTATAGGCAATGGCGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPSHSLQEHCSISAT*FRPELDCYRQWRWE Trigger: TTCCCACCGCCATTGCCTATAACAATCGAGCTCAGGCCGAAATCAAGTTGCAGAGATGGAGCAGTGCTCTTGAAGACTGTGAGAAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS GCA 90 bp | TCCAAACTCATAGGCATTAGTAGGCTTGGAGACGTCGAGTTTTTCTaGTGGTTCTGCAGACCCTCCATCTTCCACACCATCTCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLIGISRLGDVEFF*WFCRPSIFHTISGR Trigger: CCTGCCAGAGATGGTGTGGAAGATGGAGGGTCTGCAGAACCAGCAGAAAAACTCGACGTCTCCAAGCCTACTAATGCCTATGAGTTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS CCA 90 bp | AAACTCATAGGCATTAGTAGGCTTGGAGACGTCGAGTTTTTCTGCTaGTTCTGCAGACCCTCCATCTTCCACACCATCTCTGGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLIGISRLGDVEFFC*FCRPSIFHTISGRC Trigger: GCACCTGCCAGAGATGGTGTGGAAGATGGAGGGTCTGCAGAACCAGCAGAAAAACTCGACGTCTCCAAGCCTACTAATGCCTATGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS TCA 90 bp | CCTCAAGTTTGTTACTTAGCAACAGTGGCAGGTCTTTGGGTGCAGTaGTGGCTAAAAGATGTGCACAGGCCTCTTCATCTTTCCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQVCYLATVAGLWVQ*WLKDVHRPLHLSWH Trigger: GTGCCAGGAAAGATGAAGAGGCCTGTGCACATCTTTTAGCCATCACTGCACCCAAAGACCTGCCACTGTTGCTAAGTAACAAACTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACACTCCTCTCCCTTCCTTaGCTGGGAGGTGCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTLLSLP*LGGAVS Trigger: TGACACAGCACCTCCCAGCAAAGGAAGGGAGAGGAG...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS TCA 90 bp | GAGCCCTGTTACAATCCTGGATGCAGTCCCTGCAGTTCCCTTCTTTaGGGTAGCATGCCGCTCTATTTGAATACAAGATGCTTAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EPCYNPGCSPCSSLL*GSMPLYLNTRCLAH Trigger: ATGAGCTAAGCATCTTGTATTCAAATAGAGCGGCATGCTACCTCAAAGAAGGGAACTGCAGGGACTGCATCCAGGATTGTAACAGGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCAGGTCTCATAGGCCATaGCTCGCCGCAGAAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVRSHRP*LAAEEA Trigger: AGCCTCTTCTGCGGCGAGCAATGGCCTATGAGACCT...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTAGGTCTCATAGGCCATaGCTCGCCGCAGAAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVARSHRP*LAAEEA Trigger: AGCCTCTTCTGCGGCGAGCAATGGCCTATGAGACCT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTCCTCTCCCTTCCTTaGCTGGGAGGTGCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVALLSLP*LGGAVS Trigger: TGACACAGCACCTCCCAGCAAAGGAAGGGAGAGGAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS TCA 90 bp | TGCAGCACCTTTCTCAGGTCGTCCACAGCTTCCTGGAGCTTGTTTTaGTGTTTATATGTAGTGGCTCGTCTCAGGAGAGCTTTTACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSTFLRSSTASWSLF*CLYVVARLRRAFTF Trigger: AAACGTAAAAGCTCTCCTGAGACGAGCCACTACATATAAACATCAAAACAAGCTCCAGGAAGCTGTGGACGACCTGAGAAAGGTGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS CCA 90 bp | TGTGTGTCTGACAGACCATCAAACAGCTGCGCCATCTGCTCCTTTTaGCCTTTGTTAATTAGTGTCAGCATCGTCTTAAACCTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CVSDRPSNSCAICSF*PLLISVSIVLNLSA Trigger: AGCAGAGAGGTTTAAGACGATGCTGACACTAATTAACAAAGGCCAAAAGGAGCAGATGGCGCAGCTGTTTGATGGTCTGTCAGACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTCCTCTTCCCTTTGGTTaGGAGCTCAGAGACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TVSHFSKVDFVHLSGTESPLPFG*ELRDRL Trigger: GAGCCTGTCTCTGAGCTCCAAACCAAAGGGAAGAGG...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCCTCTTCCCTTTGGTTaGGAGCTCAGAGACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAPLPFG*ELRDRL Trigger: GAGCCTGTCTCTGAGCTCCAAACCAAAGGGAAGAGG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCTTAGCTCATCCGCATTaGCACTTCCTGTGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FVHLSGTESDGVATANICLAHPH*HFLWVP Trigger: TGGAACCCACAGGAAGTGCAAATGCGGATGAGCTAA...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTCGGCATGCAGTTGTaGGGACAGGGATCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVALGMQL*GQGSWS Trigger: AGACCAAGATCCCTGTCCCAACAACTGCATGCCGAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAATCCACCTCTTGGACTaGGATTCTCCTCCTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTIHLLD*DSPPLP Trigger: AGGGAGAGGAGGAGAATCCAAGTCCAAGAGGTGGAT...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCGCTGCCATCCACCTCTaGGACTTGGATTCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVAAIHL*DLDSPP Trigger: AGGAGGAGAATCCAAGTCCAAGAGGTGGATGGCAGC...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGCTGCCATCCACCTCTaGGACTTGGATTCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAAAIHL*DLDSPP Trigger: AGGAGGAGAATCCAAGTCCAAGAGGTGGATGGCAGC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAACCATCCTCTTCCCTTaGGTTTGGAGCTCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTTILFP*VWSSET Trigger: TGTCTCTGAGCTCCAAACCAAAGGGAAGAGGATGGT...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTATCCACCTCTTGGACTaGGATTCTCCTCCTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAIHLLD*DSPPLP Trigger: AGGGAGAGGAGGAGAATCCAAGTCCAAGAGGTGGAT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAAACAGTGGCAGGTCTTaGGGTGCAGTGATGGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTNSGRS*GAVMAK Trigger: TTTAGCCATCACTGCACCCAAAGACCTGCCACTGTT...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACAGAAAGTCTTTTAGGAGCCAAGTaGGTGAGGCACTTCTCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVSHFSKVDFVHLSGTESLLGAK*VRHFSQ Trigger: TTGCGAGAAGTGCCTCACCAACTTGGCTCCTAAAAG...ACTTTCTGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTCTTTTAGGAGCCAAGTaGGTGAGGCACTTCTCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVALLGAK*VRHFSQ Trigger: TTGCGAGAAGTGCCTCACCAACTTGGCTCCTAAAAG...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTACCATCCTCTTCCCTTaGGTTTGGAGCTCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVATILFP*VWSSET Trigger: TGTCTCTGAGCTCCAAACCAAAGGGAAGAGGATGGT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTAGCTCATCCGCATTaGCACTTCCTGTGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVALAHPH*HFLWVP Trigger: TGGAACCCACAGGAAGTGCAAATGCGGATGAGCTAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTAACAGTGGCAGGTCTTaGGGTGCAGTGATGGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVANSGRS*GAVMAK Trigger: TTTAGCCATCACTGCACCCAAAGACCTGCCACTGTT...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCTTAAACCTCTCTGCTTaGCTCAGATACAGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: FVHLSGTESDGVATANICLNLSA*LRYRRC Trigger: GCATCTCCTGTATCTGAGCAAAGCAGAGAGGTTTAA...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGTCTCTCCCGCCATTTaGATCCATCTAGCTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAVSPAI*IHLALL Trigger: TAACAGAGCTAGATGGATCAAAATGGCGGGAGAGAC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCATTTGAGTGGGACAGAAAGTGATGGAGTCGCAACTGCTAACATTTGCGTATTTTCCTCTCTTTaGATTTCTGACACCCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: FVHLSGTESDGVATANICVFSSL*ISDTQL Trigger: GAGTTGGGTGTCAGAAATCAAAAGAGAGGAAAATAC...GCAAATGTTAGCAGTTGCGACTCCATCACTTTCTGTCCCACTCAAATGCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTAAACCTCTCTGCTTaGCTCAGATACAGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVALNLSA*LRYRRC Trigger: GCATCTCCTGTATCTGAGCAAAGCAGAGAGGTTTAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACAGTAAGCCACTTCTCTAAAGTGGATTTTGTGCATTTGAGTGGGACATTCCTGGAGCTTGTTTaGATGTTTATATGTAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QVTVSHFSKVDFVHLSGTFLELV*MFICSG Trigger: GCCACTACATATAAACATCAAAACAAGCTCCAGGAA...TGTCCCACTCAAATGCACAAAATCCACTTTAGAGAAGTGGCTTACTGTCACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTGCTCCTTTTGGCCTTaGTTAATTAGTGTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVACSFWP*LISVSI Trigger: GATGCTGACACTAATTAACAAAGGCCAAAAGGAGCA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTGTATTTTCCTCTCTTTaGATTTCTGACACCCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAVFSSL*ISDTQL Trigger: GAGTTGGGTGTCAGAAATCAAAAGAGAGGAAAATAC...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
||
| CDS-3UTR CAA 90 bp | GAGTCGCAACTGCTAACATTTGCTTTTAAAGGACTAAAGTCACTGATTGCTGTCTTTGTCCTTTACAAGTaGATTTCCTTCTTCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESQLLTFAFKGLKSLIAVFVLYK*ISFFLE Trigger: CTCAAGGAAGAAGGAAATCAACTTGTAAAGGACAAA...GACAGCAATCAGTGACTTTAGTCCTTTAAAAGCAAATGTTAGCAGTTGCGACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047348.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATAAGTACAACATCTGATGTCCAAACAGGGATCCTTCTGGGTGTGGCTTTTGTCCTTTACAAGTaGATTTCCTTCTTCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IKISTTSDVQTGILLGVAFVLYK*ISFFLE Trigger: CTCAAGGAAGAAGGAAATCAACTTGTAAAGGACAAA...AGCCACACCCAGAAGGATCCCTGTTTGGACATCAGATGTTGTACTTATTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | TATTGCGCGGCTGCCTCTGCGAATTGCCCGCCGCGGAACAGCTCGTaGCCCCGTCTCTTGAGGCCGCTGGGGTTGTCAGCGGCTCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: YCAAASANCPPRNSS*PRLLRPLGLSAARG Trigger: GCCGCGAGCCGCTGACAACCCCAGCGGCCTCAAGAGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | AATTGCCCGCCGCGGAACAGCTCGTTGCCCCGTCTCTaGAGGCCGCTGGGGTTGTCAGCGGCTCGCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NCPPRNSSLPRL*RPLGLSAARGS Trigger: GGAGCCGCGAGCCGCTGACAACCCCAGCGGCCTCAAGAGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | CTGCGCTATCGCCACCGAGTATTGCGCGGCTGCCTCTaGGAATTGCCCGCCGCGGAACAGCTCGTTGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: LRYRHRVLRGCL*ELPAAEQLVAP Trigger: CGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | CAGCTGCGCTATCGCCACCGAGTATTGCGCGGCTGCCTCTGCGAATaGCCCGCCGCGGAACAGCTCGTTGCCCCGTCTCTTGAGGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: QLRYRHRVLRGCLCE*PAAEQLVAPSLEAA Trigger: AGCGGCCTCAAGAGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | ATCGCCACCGAGTATTGCGCGGCTGCCTCTGCGAATTaGCCGCCGCGGAACAGCTCGTTGCCCCGTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: IATEYCAAASAN*PPRNSSLPRLL Trigger: CAAGAGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS TCA 72 bp | CGGGCGGCTTCACTGGAATCTGGGCTTAGGAGGACTTaGCTGGGGTCCACCCCGCTTTCCCGGCAGTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RAASLESGLRRT*LGSTPLSRQFS Trigger: CGAGAACTGCCGGGAAAGCGGGGTGGACCCCAGTCAAGTCCTCCTAAGCCCAGATTCCAGTGAAGCCGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | TTCCAGCTGCGCTATCGCCACCGAGTATTGCGCGGCTaGCTCTGCGAATTGCCCGCCGCGGAACAGCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: FQLRYRHRVLRG*LCELPAAEQLV Trigger: AACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAGCTGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CCA 72 bp | CTGCAGCAGGGAGCCAAACTCGCAGTGGCTCAGATGTaGGTACAGCTGGGATGGGTGGCAGTCTCTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LQQGAKLAVAQM*VQLGWVAVSPA Trigger: GGCGGGAGAGACTGCCACCCATCCCAGCTGTACCCACATCTGAGCCACTGCGAGTTTGGCTCCCTGCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | TATCGCCACCGAGTATTGCGCGGCTGCCTCTGCGAATaGCCCGCCGCGGAACAGCTCGTTGCCCCGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: YRHRVLRGCLCE*PAAEQLVAPSL Trigger: AAGAGACGGGGCAACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | ATTTGCACTTCCTGTGGGTTCCAGCTGCGCTATCGCCACCGAGTATaGCGCGGCTGCCTCTGCGAATTGCCCGCCGCGGAACAGCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: ICTSCGFQLRYRHRV*RGCLCELPAAEQLV Trigger: AACGAGCTGTTCCGCGGCGGGCAATTCGCAGAGGCAGCCGCGCAATACTCGGTGGCGATAGCGCAGCTGGAACCCACAGGAAGTGCAAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CCA 72 bp | GTGATGCTCGGCATGCAGTTGTTGGGACAGGGATCTTaGTCTGGGGTCTCTGCAGCAGGGAGCCAAACTCGC | + |
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Preference number: 6 (lower is better) Translates to: VMLGMQLLGQGS*SGVSAAGSQTR Trigger: GCGAGTTTGGCTCCCTGCTGCAGAGACCCCAGACCAAGATCCCTGTCCCAACAACTGCATGCCGAGCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CCA 72 bp | TCCACCCCGCTTTCCCGGCAGTTCTCGAGTCCTTTCTaGGCGAGCGCTAGTCTGTGGCTGGCTTTCACATTC | + |
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Preference number: 6 (lower is better) Translates to: STPLSRQFSSPF*ASASLWLAFTF Trigger: GAATGTGAAAGCCAGCCACAGACTAGCGCTCGCCCAGAAAGGACTCGAGAACTGCCGGGAAAGCGGGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | CTGCCATCCACCTCTTGGACTTGGATTCTCCTCCTCTCCCTTCCTTaGCTGGGAGGTGCTGTGTCATTCTTAGTGTCCAGGTGCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LPSTSWTWILLLSLP*LGGAVSFLVSRCRA Trigger: CGCCCGGCACCTGGACACTAAGAATGACACAGCACCTCCCAGCAAAGGAAGGGAGAGGAGGAGAATCCAAGTCCAAGAGGTGGATGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | AAGGTCTTCTTGGCCAAGTCGTTGTCCGGCTCCACCTaGAGCACCTTTCTCAGGTCGTCCACAGCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KVFLAKSLSGST*STFLRSSTASW Trigger: CCAGGAAGCTGTGGACGACCTGAGAAAGGTGCTGCAGGTGGAGCCGGACAACGACTTGGCCAAGAAGACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | GGCCGCCTCATCCGAGCCACCATCTTCACGCTCATCTaGGCTTCCCTTTCCACCTTCATCTCCCGAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GRLIRATIFTLI*ASLSTFISRVF Trigger: GAAAACTCGGGAGATGAAGGTGGAAAGGGAAGCGCAGATGAGCGTGAAGATGGTGGCTCGGATGAGGCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CCA 72 bp | TCCGGCGGACCATCAGCTTCTTCTGAATGTTGCCCATaGCCGCCTCATCCGAGCCACCATCTTCACGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SGGPSASSECCP*PPHPSHHLHAH Trigger: ATGAGCGTGAAGATGGTGGCTCGGATGAGGCGGCCATGGGCAACATTCAGAAGAAGCTGATGGTCCGCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | GCCGTCTATCTGAAGCGCCTGCTCACAGTCCAGCTTTaGCTCTTCAAACTGGCCCAGCTTCAGGTAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: AVYLKRLLTVQL*LFKLAQLQVTE Trigger: CTCTGTTACCTGAAGCTGGGCCAGTTTGAAGAGGCAAAGCTGGACTGTGAGCAGGCGCTTCAGATAGACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | TCACATTCTCGCCGTCTATCTGAAGCGCCTGCTCACAGTCCAGCTTaGCCTCTTCAAACTGGCCCAGCTTCAGGTAACAGAGAGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SHSRRLSEAPAHSPA*PLQTGPASGNREPC Trigger: ACAGGGCTCTCTGTTACCTGAAGCTGGGCCAGTTTGAAGAGGCAAAGCTGGACTGTGAGCAGGCGCTTCAGATAGACGGCGAGAATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS TCA 72 bp | AGTCTGTGGCTGGCTTTCACATTCTCGCCGTCTATCTaGAGCGCCTGCTCACAGTCCAGCTTTGCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLWLAFTFSPSI*SACSQSSFASS Trigger: TGAAGAGGCAAAGCTGGACTGTGAGCAGGCGCTTCAGATAGACGGCGAGAATGTGAAAGCCAGCCACAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | AGTAGGCTTGGAGACGTCGAGTTTTTCTGCTGGTTCTaGAGACCCTCCATCTTCCACACCATCTCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRLGDVEFFCWF*RPSIFHTISGR Trigger: CCTGCCAGAGATGGTGTGGAAGATGGAGGGTCTGCAGAACCAGCAGAAAAACTCGACGTCTCCAAGCCTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CCA 72 bp | AAACTCGCAGTGGCTCAGATGTGGGTACAGCTGGGATaGGTGGCAGTCTCTCCCGCCATTTTGATCCATCTA | + |
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Preference number: 6 (lower is better) Translates to: KLAVAQMWVQLG*VAVSPAILIHL Trigger: TAGATGGATCAAAATGGCGGGAGAGACTGCCACCCATCCCAGCTGTACCCACATCTGAGCCACTGCGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | CTTTCAACCTCTGATAAGGTCTTCTTGGCCAAGTCGTaGTCCGGCTCCACCTGCAGCACCTTTCTCAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LSTSDKVFLAKS*SGSTCSTFLRS Trigger: CGACCTGAGAAAGGTGCTGCAGGTGGAGCCGGACAACGACTTGGCCAAGAAGACCTTATCAGAGGTTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CCA 72 bp | TATAGGCAATGGCGGTGGGAAGGGCTGATAAGCTCCTaGTGTAATACATCACGGCCTCTTCATAGTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: YRQWRWEGLISS*CNTSRPLHSPQ Trigger: CTGGGGACTATGAAGAGGCCGTGATGTATTACACCAGGAGCTTATCAGCCCTTCCCACCGCCATTGCCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | TCTTCCGCTGAAAAGCTGGATGCTGTCTCTGCAGGCTaGTCCTTCCTCAGAGCTCGACTTTTAGGAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SSAEKLDAVSAG*SFLRARLLGAK Trigger: CTTGGCTCCTAAAAGTCGAGCTCTGAGGAAGGACAAGCCTGCAGAGACAGCATCCAGCTTTTCAGCGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | TTCAGATCTCTTTCAACCTCTGATAAGGTCTTCTTGGCCAAGTCGTaGTCCGGCTCCACCTGCAGCACCTTTCTCAGGTCGTCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: FRSLSTSDKVFLAKS*SGSTCSTFLRSSTA Trigger: AGCTGTGGACGACCTGAGAAAGGTGCTGCAGGTGGAGCCGGACAACGACTTGGCCAAGAAGACCTTATCAGAGGTTGAAAGAGATCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | GGCTCTGAATTCTTCAGATCTCTTTCAACCTCTGATAAGGTCTTCTaGGCCAAGTCGTTGTCCGGCTCCACCTGCAGCACCTTTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSEFFRSLSTSDKVF*AKSLSGSTCSTFLR Trigger: CCTGAGAAAGGTGCTGCAGGTGGAGCCGGACAACGACTTGGCCAAGAAGACCTTATCAGAGGTTGAAAGAGATCTGAAGAATTCAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CCA 72 bp | TCTTCAGATCTCTTTCAACCTCTGATAAGGTCTTCTTaGCCAAGTCGTTGTCCGGCTCCACCTGCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: SSDLFQPLIRSS*PSRCPAPPAAP Trigger: AGGTGCTGCAGGTGGAGCCGGACAACGACTTGGCCAAGAAGACCTTATCAGAGGTTGAAAGAGATCTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | ATGCGTTCCTGTATTGCTCTAAGGTCTCATAGGCCATaGCTCGCCGCAGAAGAGGCTTCACTGAGAACGGAT | + |
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Preference number: 6 (lower is better) Translates to: MRSCIALRSHRP*LAAEEASLRTD Trigger: ATCCGTTCTCAGTGAAGCCTCTTCTGCGGCGAGCAATGGCCTATGAGACCTTAGAGCAATACAGGAACGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | AGCATGCCGCTCTATTTGAATACAAGATGCTTAGCTCATCCGCATTaGCACTTCCTGTGGGTTCCAGCTGCGCTATCGCCACCGAGTATT | + |
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Preference number: 6 (lower is better) Translates to: SMPLYLNTRCLAHPH*HFLWVPAALSPPSI Trigger: AATACTCGGTGGCGATAGCGCAGCTGGAACCCACAGGAAGTGCAAATGCGGATGAGCTAAGCATCTTGTATTCAAATAGAGCGGCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | AGTCCACATATGCGTTCCTGTATTGCTCTAAGGTCTCATAGGCCATaGCTCGCCGCAGAAGAGGCTTCACTGAGAACGGATGAAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SPHMRSCIALRSHRP*LAAEEASLRTDEVP Trigger: TGGAACTTCATCCGTTCTCAGTGAAGCCTCTTCTGCGGCGAGCAATGGCCTATGAGACCTTAGAGCAATACAGGAACGCATATGTGGACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | ATAGGCATTAGTAGGCTTGGAGACGTCGAGTTTTTCTaGTGGTTCTGCAGACCCTCCATCTTCCACACCATC | + |
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Preference number: 6 (lower is better) Translates to: IGISRLGDVEFF*WFCRPSIFHTI Trigger: GATGGTGTGGAAGATGGAGGGTCTGCAGAACCAGCAGAAAAACTCGACGTCTCCAAGCCTACTAATGCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS GCA 72 bp | GTCTTAAACCTCTCTGCTTTGCTCAGATACAGGAGATaGTCATACACCAGGGAGGGGTCTTTAGCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLNLSALLRYRR*SYTREGSLATR Trigger: CCTTGTGGCTAAAGACCCCTCCCTGGTGTATGAGCATCTCCTGTATCTGAGCAAAGCAGAGAGGTTTAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | AACGTGTCCCCCTCAAGTTTGTTACTTAGCAACAGTGGCAGGTCTTaGGGTGCAGTGATGGCTAAAAGATGTGCACAGGCCTCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: NVSPSSLLLSNSGRS*GAVMAKRCAQASSS Trigger: AGATGAAGAGGCCTGTGCACATCTTTTAGCCATCACTGCACCCAAAGACCTGCCACTGTTGCTAAGTAACAAACTTGAGGGGGACACGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS TCA 72 bp | CACAGTCTTCAAGAGCACTGCTCCATCTCTGCAACTTaGTTTCGGCCTGAGCTCGATTGTTATAGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: HSLQEHCSISAT*FRPELDCYRQW Trigger: CCATTGCCTATAACAATCGAGCTCAGGCCGAAATCAAGTTGCAGAGATGGAGCAGTGCTCTTGAAGACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | TTGTCCTTCCTCAGAGCTCGACTTTTAGGAGCCAAGTaGGTGAGGCACTTCTCGCAAAATTCCGTGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSFLRARLLGAK*VRHFSQNSVSS Trigger: TGAACTCACGGAATTTTGCGAGAAGTGCCTCACCAACTTGGCTCCTAAAAGTCGAGCTCTGAGGAAGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | CTTTCTCAGGTCGTCCACAGCTTCCTGGAGCTTGTTTaGATGTTTATATGTAGTGGCTCGTCTCAGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LSQVVHSFLELV*MFICSGSSQES Trigger: GCTCTCCTGAGACGAGCCACTACATATAAACATCAAAACAAGCTCCAGGAAGCTGTGGACGACCTGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 72 bp | CTCTATTTGAATACAAGATGCTTAGCTCATCCGCATTaGCACTTCCTGTGGGTTCCAGCTGCGCTATCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LYLNTRCLAHPH*HFLWVPAALSP Trigger: TGGCGATAGCGCAGCTGGAACCCACAGGAAGTGCAAATGCGGATGAGCTAAGCATCTTGTATTCAAATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | CTGCAGCACCTTTCTCAGGTCGTCCACAGCTTCCTGGAGCTTGTTTaGATGTTTATATGTAGTGGCTCGTCTCAGGAGAGCTTTTACGTT | + |
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Preference number: 6 (lower is better) Translates to: LQHLSQVVHSFLELV*MFICSGSSQESFYV Trigger: AACGTAAAAGCTCTCCTGAGACGAGCCACTACATATAAACATCAAAACAAGCTCCAGGAAGCTGTGGACGACCTGAGAAAGGTGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | TCTGACAGACCATCAAACAGCTGCGCCATCTGCTCCTTTTGGCCTTaGTTAATTAGTGTCAGCATCGTCTTAAACCTCTCTGCTTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SDRPSNSCAICSFWP*LISVSIVLNLSALL Trigger: GAGCAAAGCAGAGAGGTTTAAGACGATGCTGACACTAATTAACAAAGGCCAAAAGGAGCAGATGGCGCAGCTGTTTGATGGTCTGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS TCA 72 bp | TACAATCCTGGATGCAGTCCCTGCAGTTCCCTTCTTTaGGGTAGCATGCCGCTCTATTTGAATACAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: YNPGCSPCSSLL*GSMPLYLNTRC Trigger: GCATCTTGTATTCAAATAGAGCGGCATGCTACCTCAAAGAAGGGAACTGCAGGGACTGCATCCAGGATTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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| CDS CAA 90 bp | TGGCCTTTGTTAATTAGTGTCAGCATCGTCTTAAACCTCTCTGCTTaGCTCAGATACAGGAGATGCTCATACACCAGGGAGGGGTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: WPLLISVSIVLNLSA*LRYRRCSYTREGSL Trigger: TAAAGACCCCTCCCTGGTGTATGAGCATCTCCTGTATCTGAGCAAAGCAGAGAGGTTTAAGACGATGCTGACACTAATTAACAAAGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047348.11 ENSMUST00000171205.3 |
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