Pregenerated sensors for SPACA7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010435Ensembl transcript IDs: ENSMUST00000010579.8, ENSMUST00000209428.2, ENSMUST00000210276.2, ENSMUST00000210424.2, ENSMUST00000211182.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTaGCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VHSLRWVAWSSPVAP*LSKLSSACVSLSSW Trigger: CCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CCA 90 bp | AGAACCAGTAACAGTGAGTGTGTGCATTCCCTAAGATGGGTGGCATaGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTCAGCAGCGCC | + |
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Preference number: 1 (lower is better) Translates to: RTSNSECVHSLRWVA*SSPVAPCLSKLSSA Trigger: GGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTTACTGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CCA 90 bp | CTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTaGTCCTCTTCTTCTCCTCCTAAAAGATGCTTTCTGTTAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LSKLSSACVSLSSWA*SSSSPPKRCFLLAP Trigger: TGGAGCTAACAGAAAGCATCTTTTAGGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209428.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CCA 90 bp | CCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTaGGCTTGGTCCTCTTCTTCTCCTCCTAAAAGATGCTTTCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: PCLSKLSSACVSLSS*AWSSSSPPKRCFLL Trigger: TAACAGAAAGCATCTTTTAGGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209428.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR GCA 90 bp | TCGCTGTCCTCCTGGGCTTGGTCCTCTTCTTCTCCTCCTAAAAGATaGTTTCTGTTAGCTCCAGGCTGCCTTCAGATTGTCCTATGTTTT | + |
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Preference number: 1 (lower is better) Translates to: SLSSWAWSSSSPPKR*FLLAPGCLQIVLCF Trigger: AAAACATAGGACAATCTGAAGGCAGCCTGGAGCTAACAGAAAGCATCTTTTAGGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CCA 90 bp | TTCTTTTTAAGAACCAGTAACAGTGAGTGTGTGCATTCCCTAAGATaGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: FFLRTSNSECVHSLR*VAWSSPVAPCLSKL Trigger: GAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTTACTGGTTCTTAAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCGTGCATTCCCTAAGATaGGTGGCATGGAGCTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: GALRWLLAFLSSAAPVSRVHSLR*VAWSSP Trigger: CGGAGAGCTCCATGCCACCCATCTTAGGGAATGCAC...GCGAGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTCTTCTTCTCCTCCTAGAAGGTTTGCAACCGTaGTTCTGTCATTTTTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AAPVSRCPPGLGPLLLLLEGLQP*FCHFCH Trigger: GTGGCAAAAATGACAGAAGCACGGTTGCAAACCTTC...TAGGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210424.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCCAGGACCTCATGGTAGTTCTCAAAGGCTTCCTCTTGGTAGTTTTCATCTCTCCGGTGGCTCCTTaGCTTTCTAAGCTCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VLQDLMVVLKGFLLVVFISPVAP*LSKLSS Trigger: GCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGA...GATGAAAACTACCAAGAGGAAGCCTTTGAGAACTACCATGAGGTCCTGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACCAGTAACAGTGAGTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTTTCAGGAGACGAGGGTaGCTCATGCTTAGTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RTSNSECVHSLRWVAWSSFRRRG*LMLSLR Trigger: TCTCAGACTAAGCATGAGCCACCCTCGTCTCCTGAA...AGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTTACTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210424.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCTGCCTTCAGATTGTCCTATGTTTTCAAGGATTTTGTCCAGAACAGACGTGCATTCCCTAAGATaGGTGGCATGGAGCTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: SRLPSDCPMFSRILSRTDVHSLR*VAWSSP Trigger: CGGAGAGCTCCATGCCACCCATCTTAGGGAATGCAC...GTCTGTTCTGGACAAAATCCTTGAAAACATAGGACAATCTGAAGGCAGCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCCTAAAAGATGCTTTCTGTTAGCTCCAGGCTGCCTTCAGATTGTCCTAATACACATCATCGTTTaGACTCCCCTTTCCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPPKRCFLLAPGCLQIVLIHIIV*TPLSFR Trigger: CCTGAAGGAAAGGGGAGTTCAAACGATGATGTGTAT...TAGGACAATCTGAAGGCAGCCTGGAGCTAACAGAAAGCATCTTTTAGGAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210424.2 |
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| 3UTR-3UTR CCA 90 bp | GATTGTCCTATGTTTTCAAGGATTTTGTCCAGAACAGACAGTTTCCCATACACAGTGCATTCCCTAAGATaGGTGGCATGGAGCTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: DCPMFSRILSRTDSFPYTVHSLR*VAWSSP Trigger: CGGAGAGCTCCATGCCACCCATCTTAGGGAATGCAC...TGTGTATGGGAAACTGTCTGTTCTGGACAAAATCCTTGAAAACATAGGACAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATGGTAGTTCTCAAAGGCTTCCTCTTGGTAGTTTTCATCAATACCAGCATTTGGACCTTTCCTTTCTaGGGCACAGAACTCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LMVVLKGFLLVVFINTSIWTFPF*GTELCL Trigger: CAGACAGAGTTCTGTGCCTCAGAAAGGAAAGGTCCA...AATGCTGGTATTGATGAAAACTACCAAGAGGAAGCCTTTGAGAACTACCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAGAACAGACAGTTTCCCATACACATCATCGTTTGAACTCCCCTTTCCATACACTGCTGATGTTTTaGGCTCCAAAATCTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: CPEQTVSHTHHRLNSPFHTLLMF*APKSLG Trigger: CCCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGT...ATGGAAAGGGGAGTTCAAACGATGATGTGTATGGGAAACTGTCTGTTCTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211182.2 |
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| 3UTR CAA 90 bp | ATCGATGATCTTGGTCGTGGTGATGTTTCAGACACTGCTGATGTTTaGGGCTCCAAAATCTCTTGGGCTAGAATTTCATCTAATGCTTCG | + |
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Preference number: 2 (lower is better) Translates to: IDDLGRGDVSDTADV*GSKISWARISSNAS Trigger: CGAAGCATTAGATGAAATTCTAGCCCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGTCTGAAACATCACCACGACCAAGATCATCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTATGTTTTCAAGGATTTTGTCCAGAACAGACAGTTTCCCATACACATCATGGACCTTTCCTTTCTaGGGCACAGAACTCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: CPMFSRILSRTDSFPYTSWTFPF*GTELCL Trigger: CAGACAGAGTTCTGTGCCTCAGAAAGGAAAGGTCCA...TGATGTGTATGGGAAACTGTCTGTTCTGGACAAAATCCTTGAAAACATAGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CAA 90 bp | TTCTATGTTCTCCAGGACCTCATGGTAGTTCTCAAAGGCTTCCTCTaGGTAGTTTTCATCAATACCAGCATTTATTTCCTTGGTTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: FYVLQDLMVVLKGFL*VVFINTSIYFLGLY Trigger: GTACAAACCAAGGAAATAAATGCTGGTATTGATGAAAACTACCAAGAGGAAGCCTTTGAGAACTACCATGAGGTCCTGGAGAACATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR GCA 72 bp | CTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTaGCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTG | + |
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Preference number: 3 (lower is better) Translates to: LRWVAWSSPVAP*LSKLSSACVSL Trigger: CAGCGAGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CCA 72 bp | CTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTaGTCCTCTTCTTCTCCTCCTAAAAGATGCTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LSSACVSLSSWA*SSSSPPKRCFL Trigger: CAGAAAGCATCTTTTAGGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209428.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CCA 72 bp | AACAGTGAGTGTGTGCATTCCCTAAGATGGGTGGCATaGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: NSECVHSLRWVA*SSPVAPCLSKL Trigger: GAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CCA 72 bp | AGAACCAGTAACAGTGAGTGTGTGCATTCCCTAAGATaGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: RTSNSECVHSLR*VAWSSPVAPCL Trigger: AAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTTACTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR GCA 72 bp | TCCTGGGCTTGGTCCTCTTCTTCTCCTCCTAAAAGATaGTTTCTGTTAGCTCCAGGCTGCCTTCAGATTGTC | + |
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Preference number: 3 (lower is better) Translates to: SWAWSSSSPPKR*FLLAPGCLQIV Trigger: GACAATCTGAAGGCAGCCTGGAGCTAACAGAAAGCATCTTTTAGGAGGAGAAGAAGAGGACCAAGCCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209428.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR-3UTR CAA 90 bp | AGAACCAGTAACAGTGAGTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTGACACTGCTGATGTTTaGGGCTCCAAAATCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: RTSNSECVHSLRWVAWSSDTADV*GSKISW Trigger: CCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGTC...AGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTTACTGGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR GCA 72 bp | CTCATGCTTAGTCTGAGAGCTGTGGTCATGAAGGTTTaGAACCGTGCTTCTGTCATTTTTGCCACTTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LMLSLRAVVMKV*NRASVIFATFL Trigger: GAGGAAAGTGGCAAAAATGACAGAAGCACGGTTGCAAACCTTCATGACCACAGCTCTCAGACTAAGCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210424.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTAGCTCCAGGCTGCCTTCAGATTGTCCTATGTTTTCAAGGATTTTGTCCATGTGGTCATGAAGGTTaGCAACCGTGCTTCTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: LLAPGCLQIVLCFQGFCPCGHEG*QPCFCH Trigger: ATGACAGAAGCACGGTTGCAAACCTTCATGACCACA...TGGACAAAATCCTTGAAAACATAGGACAATCTGAAGGCAGCCTGGAGCTAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210424.2 |
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| 3UTR TCA 72 bp | GTCCAGAACAGACAGTTTCCCATACACATCATCGTTTaGACTCCCCTTTCCATTTTTGCCACTTTCCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: VQNRQFPIHIIV*TPLSIFATFLL Trigger: AAGGAGGAAAGTGGCAAAAATGGAAAGGGGAGTTCAAACGATGATGTGTATGGGAAACTGTCTGTTCTGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211182.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCTGCCTTCAGATTGTCCTATGTTTTCAAGGATTTTGTCCAGAACAGACACTCAAAGGCTTCCTCTaGGTAGTTTTCATCAATACC | + |
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Preference number: 3 (lower is better) Translates to: PGCLQIVLCFQGFCPEQTLKGFL*VVFINT Trigger: GGTATTGATGAAAACTACCAAGAGGAAGCCTTTGAG...TGTCTGTTCTGGACAAAATCCTTGAAAACATAGGACAATCTGAAGGCAGCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR GCA 90 bp | TGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTGCAGCTCAGCGCCTTaGCAGCAGCACAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLSKLSSACVSLSSWAWSCSSAP*QQHSRK Trigger: CTTCCTGCTGTGCTGCTGGCAAGGCGCTGAGCTGCA...GGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTTGCAGCTCAGCGCCTTaGCAGCAGCACAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VCAFPKMGGMELSGGSLPCSSAP*QQHSRK Trigger: CTTCCTGCTGTGCTGCTGGCAAGGCGCTGAGCTGCA...AGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR GCA 90 bp | CATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGTGCAGCTCAGCGCCTTaGCAGCAGCACAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HSLRWVAWSSPVAPCLSKCSSAP*QQHSRK Trigger: CTTCCTGCTGTGCTGCTGGCAAGGCGCTGAGCTGCA...CTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR TCA 90 bp | TGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCATACACATCATCGTTTaGACTCCCCTTTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: CLSKLSSACVSLSSWAWSIHIIV*TPLSFR Trigger: CCTGAAGGAAAGGGGAGTTCAAACGATGATGTGTAT...GGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 |
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| CDS-3UTR TCA 90 bp | TGGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGATACACATCATCGTTTaGACTCCCCTTTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: WSSPVAPCLSKLSSACVSIHIIV*TPLSFR Trigger: CCTGAAGGAAAGGGGAGTTCAAACGATGATGTGTAT...CGAGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTTCAGGAGACGAGGGTaGCTCATGCTTAGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SECVHSLRWVAWSSPVAPFRRRG*LMLSLR Trigger: TCTCAGACTAAGCATGAGCCACCCTCGTCTCCTGAA...AGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 |
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| CDS-3UTR CCA 90 bp | AGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTCTTCTTCTCCTCCTAAATTCAGGAGACGAGGGTaGCTCATGCTTAGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SACVSLSSWAWSSSSPPKFRRRG*LMLSLR Trigger: TCTCAGACTAAGCATGAGCCACCCTCGTCTCCTGAA...TTTAGGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209428.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTCTTCTTCTCCTCCTCATGGCTCGGAACAATaGGAAATATGTAAGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSACVSLSSWAWSSSSPPHGSEQ*EICKEV Trigger: GACCTCCTTACATATTTCCCATTGTTCCGAGCCATG...AGGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGTTTCAGACACTGCTaGTGTTTTGGGCTCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: APCLSKLSSACVSLSSWACFRHC*CFGLQN Trigger: ATTTTGGAGCCCAAAACATCAGCAGTGTCTGAAACA...AGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR CCA 90 bp | GAGTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCACACTGCTGATGTTTTaGGCTCCAAAATCTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ECVHSLRWVAWSSPVAPCTLLMF*APKSLG Trigger: CCCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGT...GCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR CCA 90 bp | CTTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTCTCATGGCTCGGAACAATaGGAAATATGTAAGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSKLSSACVSLSSWAWSSHGSEQ*EICKEV Trigger: GACCTCCTTACATATTTCCCATTGTTCCGAGCCATG...AGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR TCA 90 bp | CATGGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTTGTTTCAGACACTGCTaGTGTTTTGGGCTCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: HGALRWLLAFLSSAAPVSCFRHC*CFGLQN Trigger: ATTTTGGAGCCCAAAACATCAGCAGTGTCTGAAACA...AGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR GCA 90 bp | TGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTTTCGAAGGTTTGCAACCGTaGTTCTGTCATTTTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: CAFPKMGGMELSGGSLPFEGLQP*FCHFCH Trigger: GTGGCAAAAATGACAGAAGCACGGTTGCAAACCTTC...GAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010579.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTTACACTGCTGATGTTTTaGGCTCCAAAATCTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CVHSLRWVAWSSPVAPCLTLLMF*APKSLG Trigger: CCCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGT...AAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR TCA 90 bp | TGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTTTCTGTTTCAGACACTGCTaGTGTTTTGGGCTCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: CAFPKMGGMELSGGSLPFCFRHC*CFGLQN Trigger: ATTTTGGAGCCCAAAACATCAGCAGTGTCTGAAACA...GAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTTCAGATTGTCCTATGTTTTCAAGGATTTTGTCCAGAACAGACAGTTTCTGCAGCTCAGCGCCTTaGCAGCAGCACAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LPSDCPMFSRILSRTDSFCSSAP*QQHSRK Trigger: CTTCCTGCTGTGCTGCTGGCAAGGCGCTGAGCTGCA...GAAACTGTCTGTTCTGGACAAAATCCTTGAAAACATAGGACAATCTGAAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR CCA 90 bp | AGAACCAGTAACAGTGAGTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTACACTGCTGATGTTTTaGGCTCCAAAATCTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RTSNSECVHSLRWVAWSSTLLMF*APKSLG Trigger: CCCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGT...AGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTTACTGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR GCA 90 bp | ATTGTCCTATGTTTTCAAGGATTTTGTCCAGAACAGACAGTTTCCCATACACATTGCAGCTCAGCGCCTTaGCAGCAGCACAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IVLCFQGFCPEQTVSHTHCSSAP*QQHSRK Trigger: CTTCCTGCTGTGCTGCTGGCAAGGCGCTGAGCTGCA...ATGTGTATGGGAAACTGTCTGTTCTGGACAAAATCCTTGAAAACATAGGACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CAA 72 bp | TGTCCAGAACAGACAGTTTCCCATACACATCATCGTTaGAACTCCCCTTTCCATTTTTGCCACTTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CPEQTVSHTHHR*NSPFHFCHFPP Trigger: AGGAGGAAAGTGGCAAAAATGGAAAGGGGAGTTCAAACGATGATGTGTATGGGAAACTGTCTGTTCTGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211182.2 |
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| 3UTR CAA 72 bp | CCATACACATCATCGTTTGAACTCCCCTTTCCATTTTaGCCACTTTCCTCCTTTGTAGGCAAGTGTTCTATG | + |
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Preference number: 4 (lower is better) Translates to: PYTSSFELPFPF*PLSSFVGKCSM Trigger: CATAGAACACTTGCCTACAAAGGAGGAAAGTGGCAAAAATGGAAAGGGGAGTTCAAACGATGATGTGTATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211182.2 |
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| 3UTR CAA 72 bp | TTTCCTTGGTTTGTACTGTTGTCAGTATCGATGATCTaGGTCGTGGTGATGTTTCAGACACTGCTGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: FPWFVLLSVSMI*VVVMFQTLLMF Trigger: AAACATCAGCAGTGTCTGAAACATCACCACGACCAAGATCATCGATACTGACAACAGTACAAACCAAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CAA 72 bp | CTCCAGGACCTCATGGTAGTTCTCAAAGGCTTCCTCTaGGTAGTTTTCATCAATACCAGCATTTATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LQDLMVVLKGFL*VVFINTSIYFL Trigger: AAGGAAATAAATGCTGGTATTGATGAAAACTACCAAGAGGAAGCCTTTGAGAACTACCATGAGGTCCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| 3UTR CAA 72 bp | CATCAATACCAGCATTTATTTCCTTGGTTTGTACTGTaGTCAGTATCGATGATCTTGGTCGTGGTGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: HQYQHLFPWFVL*SVSMILVVVMF Trigger: AAACATCACCACGACCAAGATCATCGATACTGACAACAGTACAAACCAAGGAAATAAATGCTGGTATTGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTCTTCTTCTCCTCCGACACTGCTGATGTTTaGGGCTCCAAAATCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QQRLCLAVLLGLVLFFSSDTADV*GSKISW Trigger: CCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGTC...GGAGGAGAAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209428.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCGGACACTGCTGATGTTTaGGGCTCCAAAATCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: WSSPVAPCLSKLSSACVSDTADV*GSKISW Trigger: CCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGTC...CGAGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR CAA 90 bp | GAGTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCGACACTGCTGATGTTTaGGGCTCCAAAATCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: ECVHSLRWVAWSSPVAPCDTADV*GSKISW Trigger: CCAAGAGATTTTGGAGCCCAAAACATCAGCAGTGTC...GCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR CAA 90 bp | GCATGGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCCATACACATCATCGTTaGAACTCCCCTTTCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: AWSSPVAPCLSKLSSACVHTHHR*NSPFLQ Trigger: CTGAAGGAAAGGGGAGTTCAAACGATGATGTGTATG...GACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 |
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| CDS TCA 90 bp | TGTAAGGAGGTCTGTGGTGGTGATGACAATTGCTTCTCAGTGTGCTaGCCTGAAGTTGTCTTGATCGGCTGCAGCTCAGCGCCTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: CKEVCGGDDNCFSVC*PEVVLIGCSSAPCQ Trigger: CTGGCAAGGCGCTGAGCTGCAGCCGATCAAGACAACTTCAGGTCAGCACACTGAGAAGCAATTGTCATCACCACCACAGACCTCCTTACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGTGGTCATGAAGGTTaGCAACCGTGCTTCTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: SECVHSLRWVAWSSPVAPCGHEG*QPCFCH Trigger: ATGACAGAAGCACGGTTGCAAACCTTCATGACCACA...AGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACACTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010579.8 |
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| CDS-3UTR CAA 90 bp | CTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTCTTCTTCATACACATCATCGTTaGAACTCCCCTTTCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LSSAAPVSRCPPGLGPLLHTHHR*NSPFLQ Trigger: CTGAAGGAAAGGGGAGTTCAAACGATGATGTGTATG...AAGAAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTCTCAAAGGCTTCCTCTaGGTAGTTTTCATCAATACC | + |
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Preference number: 5 (lower is better) Translates to: VCAFPKMGGMELSGGSLPLKGFL*VVFINT Trigger: GGTATTGATGAAAACTACCAAGAGGAAGCCTTTGAG...AGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR CAA 90 bp | CATGGAGCTCTCCGGTGGCTCCTTGCCTTTCTAAGCTCAGCAGCGCCTGTGTCTCTCAAAGGCTTCCTCTaGGTAGTTTTCATCAATACC | + |
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Preference number: 5 (lower is better) Translates to: HGALRWLLAFLSSAAPVSLKGFL*VVFINT Trigger: GGTATTGATGAAAACTACCAAGAGGAAGCCTTTGAG...AGACACAGGCGCTGCTGAGCTTAGAAAGGCAAGGAGCCACCGGAGAGCTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS-3UTR CAA 90 bp | GTGCATTCCCTAAGATGGGTGGCATGGAGCTCTCCGGTGGCTCCTTGCCTTTCTCTCCCCTTTCCATTTTaGCCACTTTCCTCCTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: VHSLRWVAWSSPVAPCLSLPFPF*PLSSFV Trigger: TACAAAGGAGGAAAGTGGCAAAAATGGAAAGGGGAG...AGAAAGGCAAGGAGCCACCGGAGAGCTCCATGCCACCCATCTTAGGGAATGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210276.2 |
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| CDS-3UTR CAA 90 bp | TTTCTAAGCTCAGCAGCGCCTGTGTCTCGCTGTCCTCCTGGGCTTGGTCCTCTTAACCGTGCTTCATTTTaGCCACTTTCCTCCTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: FLSSAAPVSRCPPGLGPLNRASF*PLSSFV Trigger: TACAAAGGAGGAAAGTGGCAAAAATGAAGCACGGTT...AAGAGGACCAAGCCCAGGAGGACAGCGAGACACAGGCGCTGCTGAGCTTAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209428.2 |
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| CDS TCA 72 bp | ACAATTGCTTCTCAGTGTGCTGACCTGAAGTTGTCTTaGTCGGCTGCAGCTCAGCGCCTTGCCAGCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: TIASQCADLKLS*SAAAQRLASST Trigger: TGTGCTGCTGGCAAGGCGCTGAGCTGCAGCCGATCAAGACAACTTCAGGTCAGCACACTGAGAAGCAATTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS TCA 72 bp | GTCTGTGGTGGTGATGACAATTGCTTCTCAGTGTGCTaGCCTGAAGTTGTCTTGATCGGCTGCAGCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: VCGGDDNCFSVC*PEVVLIGCSSA Trigger: CGCTGAGCTGCAGCCGATCAAGACAACTTCAGGTCAGCACACTGAGAAGCAATTGTCATCACCACCACAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210424.2 ENSMUST00000211182.2 |
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| CDS CAA 90 bp | GTTGTTGAGTTGAGTGAACCTTCAGTAATTGGACCTGAAGTTGTCTaGATCGGCTGCAGCTCAGCGCCTTGCCAGCAGCACAGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VVELSEPSVIGPEVV*IGCSSAPCQQHSRK Trigger: CTTCCTGCTGTGCTGCTGGCAAGGCGCTGAGCTGCAGCCGATCAAGACAACTTCAGGTCCAATTACTGAAGGTTCACTCAACTCAACAAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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| CDS GCA 72 bp | CTCATGCTTAGTCTGAGAGCTGTGGTCATGAAGGTTTaGAACCGTGCTTCATTTTTGCCACTTTCCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LMLSLRAVVMKV*NRASFLPLSSF Trigger: AAAGGAGGAAAGTGGCAAAAATGAAGCACGGTTGCAAACCTTCATGACCACAGCTCTCAGACTAAGCATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209428.2 |
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| CDS CAA 72 bp | TCATCTAATGCTTCGGGTATGTTTTCTGTTGTTGAGTaGAGTGAACCTTCAGTAATTGGACCTGAAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSNASGMFSVVE*SEPSVIGPEVV Trigger: GACAACTTCAGGTCCAATTACTGAAGGTTCACTCAACTCAACAACAGAAAACATACCCGAAGCATTAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010579.8 ENSMUST00000209428.2 ENSMUST00000210276.2 |
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