Pregenerated sensors for SPAAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028475Ensembl transcript IDs: ENSMUST00000131248.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCTAGGCTGCATCTCCCTGCCCTCAGACCCACCTCCACAGTCCTaGGGGCCTGGGGCCCATACCCTGCCCTCAGTCAGACCCACCTTC | + |
|
Preference number: 1 (lower is better) Translates to: LLGCISLPSDPPPQS*GPGAHTLPSVRPTF Trigger: GAAGGTGGGTCTGACTGAGGGCAGGGTATGGGCCCCAGGCCCTCAGGACTGTGGAGGTGGGTCTGAGGGCAGGGAGATGCAGCCTAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 90 bp | TTCTCCCCACTCAGGTGCCCATCCCTACTGGCCTCAGACCCACACTaGCTCTCCCTGGAACCTGCTGTGAGTCCTTCACTGAGTCCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: FSPLRCPSLLASDPH*LSLEPAVSPSLSPQ Trigger: CTGGGGACTCAGTGAAGGACTCACAGCAGGTTCCAGGGAGAGCCAGTGTGGGTCTGAGGCCAGTAGGGATGGGCACCTGAGTGGGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 90 bp | TCTCTCTGGATCCTTCCTGTGGCAGCCACATGTCTGGGGACACTCTaGCATCCCAGAGGACCCTGGTTCAGTCTCATCCCCCTCAACAGG | + |
|
Preference number: 1 (lower is better) Translates to: SLWILPVAATCLGTL*HPRGPWFSLIPLNR Trigger: CCTGTTGAGGGGGATGAGACTGAACCAGGGTCCTCTGGGATGTCAGAGTGTCCCCAGACATGTGGCTGCCACAGGAAGGATCCAGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 90 bp | TTCTGTTCTGTCAGGTGTTCCCTGAGCGCTGGGACCAGGTCTGACTaGCTCTCACCTTCTCTGAGCAGGAGCAGGTACACAGCAGAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: FCSVRCSLSAGTRSD*LSPSLSRSRYTAEL Trigger: GAGCTCTGCTGTGTACCTGCTCCTGCTCAGAGAAGGTGAGAGTCAGTCAGACCTGGTCCCAGCGCTCAGGGAACACCTGACAGAACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 90 bp | TCGCTTCTGTTCTGTCAGGTGTTCCCTGAGCGCTGGGACCAGGTCTaGCTGACTCTCACCTTCTCTGAGCAGGAGCAGGTACACAGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: SLLFCQVFPERWDQV*LTLTFSEQEQVHSR Trigger: TCTGCTGTGTACCTGCTCCTGCTCAGAGAAGGTGAGAGTCAGTCAGACCTGGTCCCAGCGCTCAGGGAACACCTGACAGAACAGAAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 90 bp | TCTGTGGAGATGGCAAGATTCCTTTCAAGAAAGATCTTCAGAGCCTaGCCCAGAGCAGAGCTCTGCCTGAGGGGGAGACAAAGCCTGGCG | + |
|
Preference number: 1 (lower is better) Translates to: SVEMARFLSRKIFRA*PRAELCLRGRQSLA Trigger: CGCCAGGCTTTGTCTCCCCCTCAGGCAGAGCTCTGCTCTGGGGCAGGCTCTGAAGATCTTTCTTGAAAGGAATCTTGCCATCTCCACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 90 bp | CTTCCCACTGCATCAGCAGCAGGTAGCCATGTGCTCTTTTGTCCCTaGACCAAGGCCGCCTCGGTACTATATTTAGCATCCACTGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LPTASAAGSHVLFCP*TKAASVLYLASTAW Trigger: CCAGGCAGTGGATGCTAAATATAGTACCGAGGCGGCCTTGGTCCAGGGACAAAAGAGCACATGGCTACCTGCTGCTGATGCAGTGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 90 bp | GAGAGAGGGAAGAGCGAGCCAGAATGGAGGGAGGCAAGAAGTTTGTaGAACGTAGAAGGATACGGATGGAGAGCTGGGAGGAGTGAGACA | + |
|
Preference number: 1 (lower is better) Translates to: ERGKSEPEWREARSL*NVEGYGWRAGRSET Trigger: TGTCTCACTCCTCCCAGCTCTCCATCCGTATCCTTCTACGTTTCACAAACTTCTTGCCTCCCTCCATTCTGGCTCGCTCTTCCCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 90 bp | CCAGAGGACCCTGGTTCAGTCTCATCCCCCTCAACAGGCAGGTCCTaGGAGAGTTACCCATTCAAGGTCAGATTCAGACATACAAGCCAC | + |
|
Preference number: 1 (lower is better) Translates to: PEDPGSVSSPSTGRS*ESYPFKVRFRHTSH Trigger: GTGGCTTGTATGTCTGAATCTGACCTTGAATGGGTAACTCTCTCAGGACCTGCCTGTTGAGGGGGATGAGACTGAACCAGGGTCCTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 90 bp | TCTATACCAACACCTTCTTGGATCGTCTCATCGAAGACTCTTCTCTaGTTCCATTCCAGTTCAGGGGCCTCCTCCTCCTCCTCCTCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: SIPTPSWIVSSKTLL*FHSSSGASSSSSSS Trigger: AGAGGAGGAGGAGGAGGAGGAGGCCCCTGAACTGGAATGGAAGCAGAGAAGAGTCTTCGATGAGACGATCCAAGAAGGTGTTGGTATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 90 bp | CACTTGTTCCCAGAAAACAGCTCTTTGTTTTCAGAATTTCAGGGCTaGTTTCAGGCAACAGGAGCAAGCCTGAGGGTTGGGCACGGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: HLFPENSSLFSEFQG*FQATGASLRVGHGA Trigger: TGCACCGTGCCCAACCCTCAGGCTTGCTCCTGTTGCCTGAAATCAGCCCTGAAATTCTGAAAACAAAGAGCTGTTTTCTGGGAACAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 90 bp | CTGCTGTTCTCCCTGCTCCACAGGCTCTCTATACCAACACCTTCTTaGATCGTCTCATCGAAGACTCTTCTCTGCTTCCATTCCAGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: LLFSLLHRLSIPTPS*IVSSKTLLCFHSSS Trigger: TGAACTGGAATGGAAGCAGAGAAGAGTCTTCGATGAGACGATCCAAGAAGGTGTTGGTATAGAGAGCCTGTGGAGCAGGGAGAACAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 90 bp | AGGTTGCAAGGGCAGAGGGCAGATACAGAGAGACAGGGGTATGAGTaGAACTGGAGCCCACTGTGTAAAGTTTTCAAAGAATCAATAAAA | + |
|
Preference number: 1 (lower is better) Translates to: RLQGQRADTERQGYE*NWSPLCKVFKESIK Trigger: TTTTATTGATTCTTTGAAAACTTTACACAGTGGGCTCCAGTTCCACTCATACCCCTGTCTCTCTGTATCTGCCCTCTGCCCTTGCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 90 bp | ACATATACTACACAGCATTGTACACATTACACATACCACGTATCATaGAACATATACATACTGCACATCAGACACATCCAACACACCATA | + |
|
Preference number: 1 (lower is better) Translates to: TYTTQHCTHYTYHVS*NIYILHIRHIQHTI Trigger: TATGGTGTGTTGGATGTGTCTGATGTGCAGTATGTATATGTTTCATGATACGTGGTATGTGTAATGTGTACAATGCTGTGTAGTATATGT 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCACTGCCTGGGAACATGATTCCCTTGGGAGATGACCAGTGTCCAGCCTCAACTCACACCTGGTCCTaGCACCTCAGCTCCCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HPLPGNMIPLGDDQCPASTHTWS*HLSSPG Trigger: CCCTGGGGAGCTGAGGTGTCAGGACCAGGTGTGAGT...TGAGGCTGGACACTGGTCATCTCCCAAGGGAATCATGTTCCCAGGCAGTGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCATTCCTCTGTGACCTTTGCATCAGCTGCTGTCCCCAGTCCCGGCCCTGTCACTGCCTGGGAACATaGTTCCCTTGGGAGATGACC | + |
|
Preference number: 2 (lower is better) Translates to: AAFLCDLCISCCPQSRPCHCLGT*FPWEMT Trigger: GGTCATCTCCCAAGGGAATCATGTTCCCAGGCAGTG...ACAGGGCCGGGACTGGGGACAGCAGCTGATGCAAAGGTCACAGAGGAATGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCTTCCCACTGCATCAGCAGCAGGTAGCCATGTGCTCTTTTGTCCCTGGACCAAGATCTTCAGAGCCTaGCCCAGAGCAGAGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HLPTASAAGSHVLFCPWTKIFRA*PRAELC Trigger: GCAGAGCTCTGCTCTGGGGCAGGCTCTGAAGATCTT...GGTCCAGGGACAAAAGAGCACATGGCTACCTGCTGCTGATGCAGTGGGAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCAGTTCAGGGGCCTCCTCCTCCTCCTCCTCCTCTCAAATCTCCCTGGGCTGCTACCCCTAGACAATaGTTCTTTCTCCCCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: IPVQGPPPPPPPLKSPWAATPRQ*FFLPTQ Trigger: CTGAGTGGGGAGAAAGAAGCATTGTCTAGGGGTAGC...AGCCCAGGGAGATTTGAGAGGAGGAGGAGGAGGAGGAGGCCCCTGAACTGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCATTCCTCTGTGACCTTTGCATCAGCTGCTGTCCCCAGTCCCGGCCCTGTTCGAAGACTCTTCTCTaGTTCCATTCCAGTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AAFLCDLCISCCPQSRPCSKTLL*FHSSSG Trigger: CCCTGAACTGGAATGGAAGCAGAGAAGAGTCTTCGA...ACAGGGCCGGGACTGGGGACAGCAGCTGATGCAAAGGTCACAGAGGAATGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCTTCCCACTGCATCAGCAGCAGGTAGCCATGTGCTCTTTTGTCCCTGGACCAGGGCTCTGGTTCCCTaGGTGGCAAATAGACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLPTASAAGSHVLFCPWTRALVP*VANRLL Trigger: CAGAAGTCTATTTGCCACCCAGGGAACCAGAGCCCT...GGTCCAGGGACAAAAGAGCACATGGCTACCTGCTGCTGATGCAGTGGGAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAACACCCAAAGCATGTCGCTTCTGTTCTGTCAGGTGTTCCCTGAGCGCTGGTCCCTGCCCTCCCTGTaGCCTGTCTGTAAAAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SNTQSMSLLFCQVFPERWSLPSL*PVCKSL Trigger: AAGGCTTTTACAGACAGGCCACAGGGAGGGCAGGGA...CCAGCGCTCAGGGAACACCTGACAGAACAGAAGCGACATGCTTTGGGTGTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCTGAGAGAGTTACCCATTCAAGGTCAGATTCAGACATACAAGCCACGAAGCAACAGGAGCAAGCCTaGGGGTTGGGCACGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GPERVTHSRSDSDIQATKQQEQA*GLGTVQ Trigger: CTGCACCGTGCCCAACCCTCAGGCTTGCTCCTGTTG...CTTCGTGGCTTGTATGTCTGAATCTGACCTTGAATGGGTAACTCTCTCAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCCCACCCCCAAATCTCTCCAGACCCAAGCCTGTCTCTCTGGATCCTTCCTGTCAACAGGCAGGTCCTaGGAGAGTTACCCATTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: NPTPKSLQTQACLSGSFLSTGRS*ESYPFK Trigger: CTTGAATGGGTAACTCTCTCAGGACCTGCCTGTTGA...CAGGAAGGATCCAGAGAGACAGGCTTGGGTCTGGAGAGATTTGGGGGTGGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACACACACACCCTTGTGCTCTGGGGACTCACCCACCTTCAAGCAGTCTAGCCTCTGGTTCCCTGGGTaGCAAATAGACTTCTGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: HTHTPLCSGDSPTFKQSSLWFPG*QIDFCH Trigger: GTGACAGAAGTCTATTTGCCACCCAGGGAACCAGAG...GCTAGACTGCTTGAAGGTGGGTGAGTCCCCAGAGCACAAGGGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCAAGCTGCTGTTCTCCCTGCTCCACAGGCTCTCTATACCAACACCTTCTTGTAGAAGGATACGGATaGAGAGCTGGGAGGAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RPSCCSPCSTGSLYQHLLVEGYG*RAGRSE Trigger: CTCACTCCTCCCAGCTCTCCATCCGTATCCTTCTAC...AAGAAGGTGTTGGTATAGAGAGCCTGTGGAGCAGGGAGAACAGCAGCTTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACTGGCTCTCCCTGGAACCTGCTGTGAGTCCTTCACTGAGTCCCCAGGACTCTCCTGCTTCCTTTTGTaGTTTTCCAGAGCAGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: TLALPGTCCESFTESPGLSCFLL*FSRADL Trigger: CAAATCTGCTCTGGAAAACCACAAAAGGAAGCAGGA...GAGTCCTGGGGACTCAGTGAAGGACTCACAGCAGGTTCCAGGGAGAGCCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 90 bp | GCTGCTGTTCTCCCTGCTCCACAGGCTCTCTATACCAACACCTTCTaGGATCGTCTCATCGAAGACTCTTCTCTGCTTCCATTCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: AAVLPAPQALYTNTF*DRLIEDSSLLPFQF Trigger: GAACTGGAATGGAAGCAGAGAAGAGTCTTCGATGAGACGATCCAAGAAGGTGTTGGTATAGAGAGCCTGTGGAGCAGGGAGAACAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCATCCCCCTCAACAGGCAGGTCCTGAGAGAGTTACCCATTCAAGGTCAGATTAGGGGCAGATGGGTCTaGCCCACTAGCAGAATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LIPLNRQVLRELPIQGQIRGRWV*PTSRIN Trigger: ATTTATTCTGCTAGTGGGTCAGACCCATCTGCCCCT...AATCTGACCTTGAATGGGTAACTCTCTCAGGACCTGCCTGTTGAGGGGGATGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCTCCCAGATCTGCTCCTGTTCTAACTATACCTCTCAGCCCTTTGCTAGATGTTTCCAGAAGCTCCTaGGCCTCGACCTCCCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: CSPRSAPVLTIPLSPLLDVSRSS*ASTSPD Trigger: ATCTGGGGAGGTCGAGGCTCAGGAGCTTCTGGAAAC...ATCTAGCAAAGGGCTGAGAGGTATAGTTAGAACAGGAGCAGATCTGGGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGGTCATGGTGTTTTATCACAACAATAGGAACCCCAAGACACCACATATACAGGGGGAGCTGCAGTaGGGGCTCTACCTCGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ALVMVFYHNNRNPKTPHIQGELQ*GLYLGL Trigger: CAGACCGAGGTAGAGCCCTCACTGCAGCTCCCCCTG...TATATGTGGTGTCTTGGGGTTCCTATTGTTGTGATAAAACACCATGACCAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAACCCTTTCCTGCCCAAGTTGCTTTGGTCATGGTGTTTTATCACAACAAGTCCCCAGGACTCCCTaGCCTCCCTGTGGCCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KQTLSCPSCFGHGVLSQQVPRTP*PPCGLS Trigger: AGACAGGCCACAGGGAGGGCAGGGAGTCCTGGGGAC...TTGTTGTGATAAAACACCATGACCAAAGCAACTTGGGCAGGAAAGGGTTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGCCTTAGTCAGGGACTCAGTGTCCAGACTGATAAGGACATGTTTCCAGAACCCCATCTAGCACTCTaGCTTCCTTCCTGCACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KSLSQGLSVQTDKDMFPEPHLAL*LPSCTS Trigger: AGAAGTGCAGGAAGGAAGTCAGAGTGCTAGATGGGG...TTCTGGAAACATGTCCTTATCAGTCTGGACACTGAGTCCCTGACTAAGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTGGTCATGGTGTTTTATCACAACAATAGGAACCCCAAGACACCACATATAACACACACACCCTTGTaGTCTGGGGACTCACCCACC | + |
|
Preference number: 2 (lower is better) Translates to: ALVMVFYHNNRNPKTPHITHTPL*SGDSPT Trigger: GGTGGGTGAGTCCCCAGAGCACAAGGGTGTGTGTGT...TATATGTGGTGTCTTGGGGTTCCTATTGTTGTGATAAAACACCATGACCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTATGTTTTTAGAGACTCTACTCCCCAGAGTCTCTAGTCTGTGTTCTCCCAGACAGCAGGTAGCCATGTaGTCTTTTGTCCCTGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: LMFLETLLPRVSSLCSPRQQVAM*SFVPGP Trigger: TGGTCCAGGGACAAAAGAGCACATGGCTACCTGCTG...TCTGGGAGAACACAGACTAGAGACTCTGGGGAGTAGAGTCTCTAAAAACATAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGGTCATGGTGTTTTATCACAACAATAGGAACCCCAAGACACCACATATATCCGCTCGAGGGCTCTaGTTCCCTGGGTGGCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: ALVMVFYHNNRNPKTPHISARGL*FPGWQI Trigger: TATTTGCCACCCAGGGAACCAGAGCCCTCGAGCGGA...TATATGTGGTGTCTTGGGGTTCCTATTGTTGTGATAAAACACCATGACCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACAAACCCTTTCCTGCCCAAGTTGCTTTGGTCATGGTGTTTTATCACAACAACCAAGCCTGTCTCTCTaGATCCTTCCTGTGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: KQTLSCPSCFGHGVLSQQPSLSL*ILPVAA Trigger: GGCTGCCACAGGAAGGATCCAGAGAGACAGGCTTGG...TTGTTGTGATAAAACACCATGACCAAAGCAACTTGGGCAGGAAAGGGTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 90 bp | ACACACATGCACACACATCATAGCCTGCAAAGTGGCTGTCCACTGTaGTCACCAATGTCACTGTCAACCCTTATGTTGCAAAGTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: THMHTHHSLQSGCPL*SPMSLSTLMLQSSL Trigger: GAGAGAACTTTGCAACATAAGGGTTGACAGTGACATTGGTGACAACAGTGGACAGCCACTTTGCAGGCTATGATGTGTGTGCATGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTATGTTTTTAGAGACTCTACTCCCCAGAGTCTCTAGTCTGTGTTCTCCCAGATCAGAATTTCAGGGCTaGTTTCAGGCAACAGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LMFLETLLPRVSSLCSPRSEFQG*FQATGA Trigger: TGCTCCTGTTGCCTGAAATCAGCCCTGAAATTCTGA...TCTGGGAGAACACAGACTAGAGACTCTGGGGAGTAGAGTCTCTAAAAACATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGGTTCCGTTCAGTGTCTGTGGAGATGGCAAGATTCCTTTCAAGAAAGATAAGAGCGAGCCAGAATaGAGGGAGGCAAGAAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KKVPFSVCGDGKIPFKKDKSEPE*REARSL Trigger: CAAACTTCTTGCCTCCCTCCATTCTGGCTCGCTCTT...ATCTTTCTTGAAAGGAATCTTGCCATCTCCACAGACACTGAACGGAACCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGGTCATGGTGTTTTATCACAACAATAGGAACCCCAAGACACCACATATATACTCATCACTTACTTaGAATCCCAGCTTATCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ALVMVFYHNNRNPKTPHIYSSLT*NPSLSG Trigger: GCCAGATAAGCTGGGATTTCAAGTAAGTGATGAGTA...TATATGTGGTGTCTTGGGGTTCCTATTGTTGTGATAAAACACCATGACCAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 90 bp | CTAAGAATAGACACAGTCTGTCGGACTATAGCAATAAAGCAAGTCTaGTTCAAAACGTGTTTTAAAGTCTTCTTGGTGGCCTTCCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LRIDTVCRTIAIKQV*FKTCFKVFLVAFLL Trigger: TAACAGGAAGGCCACCAAGAAGACTTTAAAACACGTTTTGAACAAGACTTGCTTTATTGCTATAGTCCGACAGACTGTGTCTATTCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 90 bp | TTCACGATTTTTCTATCATTCCTAAGTGACGCAAATCACTCACATTaGCTAAGAATAGACACAGTCTGTCGGACTATAGCAATAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: FTIFLSFLSDANHSH*LRIDTVCRTIAIKQ Trigger: TTGCTTTATTGCTATAGTCCGACAGACTGTGTCTATTCTTAGCAAATGTGAGTGATTTGCGTCACTTAGGAATGATAGAAAAATCGTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | CCTGCCCTCAGACCCACCTCCACAGTCCTGAGGGCCTaGGGCCCATACCCTGCCCTCAGTCAGACCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: PALRPTSTVLRA*GPYPALSQTHL Trigger: AAGGTGGGTCTGACTGAGGGCAGGGTATGGGCCCCAGGCCCTCAGGACTGTGGAGGTGGGTCTGAGGGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | GAGACAAAGCCTGGCGATCCAGCCCTCAGGGGGAGCTaGAGTGAGGGCTCTACCTCGGTCTGGCTGCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: ETKPGDPALRGS*SEGSTSVWLLP Trigger: GGGTAGCAGCCAGACCGAGGTAGAGCCCTCACTGCAGCTCCCCCTGAGGGCTGGATCGCCAGGCTTTGTCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | CACCTCCACAGTCCTGAGGGCCTGGGGCCCATACCCTaGCCTCAGTCAGACCCACCTTCCCACTGCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLHSPEGLGPIP*PQSDPPSHCIS Trigger: GCTGATGCAGTGGGAAGGTGGGTCTGACTGAGGGCAGGGTATGGGCCCCAGGCCCTCAGGACTGTGGAGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | TGGGAGGGCCCAGCCTGTTGTGAGTGGAGCCGTTTCTaGGCTGGTGGCCCTGGGTTCTATAAGGAAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WEGPACCEWSRF*AGGPGFYKEAG Trigger: GCCTGCTTCCTTATAGAACCCAGGGCCACCAGCCCAGAAACGGCTCCACTCACAACAGGCTGGGCCCTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | AGAAAGATCTTCAGAGCCTGCCCCAGAGCAGAGCTCTaGCTGAGGGGGAGACAAAGCCTGGCGATCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RKIFRACPRAEL*LRGRQSLAIQP Trigger: GGGCTGGATCGCCAGGCTTTGTCTCCCCCTCAGGCAGAGCTCTGCTCTGGGGCAGGCTCTGAAGATCTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | CCCACCTTCCCACTGCATCAGCAGCAGGTAGCCATGTaGTCTTTTGTCCCTGGACCAAGGCCGCCTCGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PTFPLHQQQVAM*SFVPGPRPPRY Trigger: GTACCGAGGCGGCCTTGGTCCAGGGACAAAAGAGCACATGGCTACCTGCTGCTGATGCAGTGGGAAGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCAGTTCAGGGGCCTCCTCCTCCTCCTCCTCCTCTCAAATCTCCCTGGGCTCACACACACACACCCTaGTGCTCTGGGGACTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: IPVQGPPPPPPPLKSPWAHTHTP*CSGDSP Trigger: GGGTGAGTCCCCAGAGCACAAGGGTGTGTGTGTGTG...AGCCCAGGGAGATTTGAGAGGAGGAGGAGGAGGAGGAGGCCCCTGAACTGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | ATCCTTCCTGTGGCAGCCACATGTCTGGGGACACTCTaGCATCCCAGAGGACCCTGGTTCAGTCTCATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ILPVAATCLGTL*HPRGPWFSLIP Trigger: GGGGATGAGACTGAACCAGGGTCCTCTGGGATGTCAGAGTGTCCCCAGACATGTGGCTGCCACAGGAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | GTCAGGTGTTCCCTGAGCGCTGGGACCAGGTCTGACTaGCTCTCACCTTCTCTGAGCAGGAGCAGGTACACA | + |
|
Preference number: 3 (lower is better) Translates to: VRCSLSAGTRSD*LSPSLSRSRYT Trigger: TGTGTACCTGCTCCTGCTCAGAGAAGGTGAGAGTCAGTCAGACCTGGTCCCAGCGCTCAGGGAACACCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | AAATTAGTGATGGATGTGGGAGGGCCCAGCCTGTTGTaGGTGGAGCCGTTTCTGGGCTGGTGGCCCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KLVMDVGGPSLL*VEPFLGWWPWV Trigger: AACCCAGGGCCACCAGCCCAGAAACGGCTCCACTCACAACAGGCTGGGCCCTCCCACATCCATCACTAATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | CTACCCCTAGACAATGCTTCTTTCTCCCCACTCAGGTaGCCATCCCTACTGGCCTCAGACCCACACTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPLDNASFSPLR*PSLLASDPHWL Trigger: GAGCCAGTGTGGGTCTGAGGCCAGTAGGGATGGGCACCTGAGTGGGGAGAAAGAAGCATTGTCTAGGGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | GGGCTCTACCTCGGTCTGGCTGCTACCCCTAGACAATaGTTCTTTCTCCCCACTCAGGTGCCCATCCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: GLYLGLAATPRQ*FFLPTQVPIPT Trigger: AGTAGGGATGGGCACCTGAGTGGGGAGAAAGAAGCATTGTCTAGGGGTAGCAGCCAGACCGAGGTAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | CTCCAGACCCAAGCCTGTCTCTCTGGATCCTTCCTGTaGCAGCCACATGTCTGGGGACACTCTGACATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQTQACLSGSFL*QPHVWGHSDIP Trigger: TGGGATGTCAGAGTGTCCCCAGACATGTGGCTGCCACAGGAAGGATCCAGAGAGACAGGCTTGGGTCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | TTCTGTCAGGTGTTCCCTGAGCGCTGGGACCAGGTCTaGCTGACTCTCACCTTCTCTGAGCAGGAGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FCQVFPERWDQV*LTLTFSEQEQV Trigger: TACCTGCTCCTGCTCAGAGAAGGTGAGAGTCAGTCAGACCTGGTCCCAGCGCTCAGGGAACACCTGACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | GTTCTTCAAATCGTCCGCTCGAGGGCTCTGGTTCCCTaGGTGGCAAATAGACTTCTGTCACAGCACCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLQIVRSRALVP*VANRLLSQHPA Trigger: AGCGGGGTGCTGTGACAGAAGTCTATTTGCCACCCAGGGAACCAGAGCCCTCGAGCGGACGATTTGAAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | CCAAAGCATGTCGCTTCTGTTCTGTCAGGTGTTCCCTaGGCGCTGGGACCAGGTCTGACTGACTCTCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: PKHVASVLSGVP*ALGPGLTDSHL Trigger: AAGGTGAGAGTCAGTCAGACCTGGTCCCAGCGCTCAGGGAACACCTGACAGAACAGAAGCGACATGCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | CACACACACACACACACACACACACACACACCCTTGTaGTCTGGGGACTCACCCACCTTCAAGCAGTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTPL*SGDSPTFKQSS Trigger: GCTAGACTGCTTGAAGGTGGGTGAGTCCCCAGAGCACAAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | ACCACCTTCCGTTTTAGAAGTCCTACTCTTCTAGGCTaGATCTCCCTGCCCTCAGACCCACCTCCACAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TTFRFRSPTLLG*ISLPSDPPPQS Trigger: GGACTGTGGAGGTGGGTCTGAGGGCAGGGAGATGCAGCCTAGAAGAGTAGGACTTCTAAAACGGAAGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR GCA 72 bp | ACACCTTCTTGGATCGTCTCATCGAAGACTCTTCTCTaGTTCCATTCCAGTTCAGGGGCCTCCTCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TPSWIVSSKTLL*FHSSSGASSSS Trigger: GGAGGAGGAGGAGGCCCCTGAACTGGAATGGAAGCAGAGAAGAGTCTTCGATGAGACGATCCAAGAAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | AAGAGCGAGCCAGAATGGAGGGAGGCAAGAAGTTTGTaGAACGTAGAAGGATACGGATGGAGAGCTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSEPEWREARSL*NVEGYGWRAGR Trigger: CCTCCCAGCTCTCCATCCGTATCCTTCTACGTTTCACAAACTTCTTGCCTCCCTCCATTCTGGCTCGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | AAACGTAGAAGGATACGGATGGAGAGCTGGGAGGAGTaGGACACCAGACACTGCTTATTGAAGGGGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: KRRRIRMESWEE*DTRHCLLKGQM Trigger: CATCTGCCCCTTCAATAAGCAGTGTCTGGTGTCTCACTCCTCCCAGCTCTCCATCCGTATCCTTCTACGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGATAAGGACATGTTTCCAGAAGCTCCTGAGCCTCGACCTCCCCAGATTCACTCTCTCCTGCTTCCTTTaGTGGTTTTCCAGAGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LIRTCFQKLLSLDLPRFTLSCFL*WFSRAD Trigger: ATCTGCTCTGGAAAACCACAAAAGGAAGCAGGAGAG...AGTGAATCTGGGGAGGTCGAGGCTCAGGAGCTTCTGGAAACATGTCCTTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | AATTTCAGGGCTGATTTCAGGCAACAGGAGCAAGCCTaGGGGTTGGGCACGGTGCAGCATCCAAAAATACTA | + |
|
Preference number: 3 (lower is better) Translates to: NFRADFRQQEQA*GLGTVQHPKIL Trigger: TAGTATTTTTGGATGCTGCACCGTGCCCAACCCTCAGGCTTGCTCCTGTTGCCTGAAATCAGCCCTGAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | CTCGGTACTATATTTAGCATCCACTGCCTGGGAACATaGTTCCCTTGGGAGATGACCAGTGTCCAGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LGTIFSIHCLGT*FPWEMTSVQPH Trigger: ATGAGGCTGGACACTGGTCATCTCCCAAGGGAATCATGTTCCCAGGCAGTGGATGCTAAATATAGTACCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | TCCCTGCTCCACAGGCTCTCTATACCAACACCTTCTTaGATCGTCTCATCGAAGACTCTTCTCTGCTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLHRLSIPTPS*IVSSKTLLCFH Trigger: ATGGAAGCAGAGAAGAGTCTTCGATGAGACGATCCAAGAAGGTGTTGGTATAGAGAGCCTGTGGAGCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTACACAGCAGAGCTCTGTCTATGCTCACCAAATGGAGGACAAGTGACCGAATGACCAAAAGCAACTaGGGAAGGATTCCGTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: QVHSRALSMLTKWRTSDRMTKSN*GRIPCI Trigger: TATGCACGGAATCCTTCCCAAGTTGCTTTTGGTCAT...TCGGTCACTTGTCCTCCATTTGGTGAGCATAGACAGAGCTCTGCTGTGTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | CAGAGCTCTGTCTATGCTCACCAAATGGAGGACAAGTaGCCGAATAATGGAATGAATGAATACAGGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QSSVYAHQMEDK*PNNGMNEYRVR Trigger: CCTTACCCTGTATTCATTCATTCCATTATTCGGTCACTTGTCCTCCATTTGGTGAGCATAGACAGAGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | CAAACAAACCCTTTCCTGCCCAAGTTGCTTTGGTCATaGTGTTTTATCACAACAATAGGAACCCCAAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: QTNPFLPKLLWS*CFITTIGTPRH Trigger: GTGTCTTGGGGTTCCTATTGTTGTGATAAAACACCATGACCAAAGCAACTTGGGCAGGAAAGGGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | AGGGCAGATACAGAGAGACAGGGGTATGAGTGGAACTaGAGCCCACTGTGTAAAGTTTTCAAAGAATCAATA | + |
|
Preference number: 3 (lower is better) Translates to: RADTERQGYEWN*SPLCKVFKESI Trigger: TATTGATTCTTTGAAAACTTTACACAGTGGGCTCCAGTTCCACTCATACCCCTGTCTCTCTGTATCTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CCA 72 bp | ATAAGCCAAACAAACCCTTTCCTGCCCAAGTTGCTTTaGTCATGGTGTTTTATCACAACAATAGGAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ISQTNPFLPKLL*SWCFITTIGTP Trigger: TGGGGTTCCTATTGTTGTGATAAAACACCATGACCAAAGCAACTTGGGCAGGAAAGGGTTTGTTTGGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | ACACAGCATTGTACACATTACACATACCACGTATCATaGAACATATACATACTGCACATCAGACACATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TQHCTHYTYHVS*NIYILHIRHIQ Trigger: TTGGATGTGTCTGATGTGCAGTATGTATATGTTTCATGATACGTGGTATGTGTAATGTGTACAATGCTGTGT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | TATCTTTCAGTTCACGATTTTTCTATCATTCCTAAGTaGCGCAAATCACTCACATTTGCTAAGAATAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: YLSVHDFSIIPK*RKSLTFAKNRH Trigger: GTGTCTATTCTTAGCAAATGTGAGTGATTTGCGTCACTTAGGAATGATAGAAAAATCGTGAACTGAAAGATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR TCA 72 bp | AGCTACCAGGTAAAATACAAGATGCCCTATAACACTTaGTCTTACATAGATAATGAACGTTTTAGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYQVKYKMPYNT*SYIDNERFSVC Trigger: ACACACACTAAAACGTTCATTATCTATGTAAGATCAAGTGTTATAGGGCATCTTGTATTTTACCTGGTAGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS-3UTR GCA 90 bp | TCCAACACCCAAAGCATGTCGCTTCTGTTCTGTCAGGTGTTCCCTGAGCGCTGGAGCTACGTCTGGAGCTaGGCTCTGGGTCTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNTQSMSLLFCQVFPERWSYVWS*ALGLGC Trigger: ACACCCAAGACCCAGAGCGCAGCTCCAGACGTAGCT...CCAGCGCTCAGGGAACACCTGACAGAACAGAAGCGACATGCTTTGGGTGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | ACACACACACACACACACACACACACACACACACCCTaGTGCTCTGGGGACTCACCCACCTTCAAGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTP*CSGDSPTFKQS Trigger: AGACTGCTTGAAGGTGGGTGAGTCCCCAGAGCACAAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | CTCCCTGCTCCACAGGCTCTCTATACCAACACCTTCTaGGATCGTCTCATCGAAGACTCTTCTCTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAPQALYTNTF*DRLIEDSSLLP Trigger: TGGAAGCAGAGAAGAGTCTTCGATGAGACGATCCAAGAAGGTGTTGGTATAGAGAGCCTGTGGAGCAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | AGATCTGCTCCTGTTCTAACTATACCTCTCAGCCCTTaGCTAGATTGCCCCAGGGAGGACCACCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSAPVLTIPLSP*LDCPREDHLPF Trigger: AAACGGAAGGTGGTCCTCCCTGGGGCAATCTAGCAAAGGGCTGAGAGGTATAGTTAGAACAGGAGCAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | CCACTGTTGTCACCAATGTCACTGTCAACCCTTATGTaGCAAAGTTCTCTCTACGCTCCTCTGACAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSPMSLSTLM*QSSLYAPLTTL Trigger: GAGGGTTGTCAGAGGAGCGTAGAGAGAACTTTGCAACATAAGGGTTGACAGTGACATTGGTGACAACAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCCCAGATCTGCTCCTGTTCTAACTATACCTCTCAGCCCTTTGCTAGATTGGGTCTTGGGTGTGTaGGTCATAGCTGAAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSPRSAPVLTIPLSPLLDWVLGV*VIAEVA Trigger: TGCTACTTCAGCTATGACTCACACACCCAAGACCCA...ATCTAGCAAAGGGCTGAGAGGTATAGTTAGAACAGGAGCAGATCTGGGAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS-3UTR TCA 90 bp | CTTATGTTTTTAGAGACTCTACTCCCCAGAGTCTCTAGTCTGTGTTCTCCCAGATGTGTGAGTCATAGCTaGAGTAGCAGAGGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMFLETLLPRVSSLCSPRCVSHS*SSRGCR Trigger: CCTGCATCCTCTGCTACTTCAGCTATGACTCACACA...TCTGGGAGAACACAGACTAGAGACTCTGGGGAGTAGAGTCTCTAAAAACATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | CACACACATCATAGCCTGCAAAGTGGCTGTCCACTGTaGTCACCAATGTCACTGTCAACCCTTATGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHHSLQSGCPL*SPMSLSTLMLQ Trigger: TTGCAACATAAGGGTTGACAGTGACATTGGTGACAACAGTGGACAGCCACTTTGCAGGCTATGATGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | CATAAGCCAAACAAACCCTTTCCTGCCCAAGTTGCTTaGGTCATGGTGTTTTATCACAACAATAGGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: HKPNKPFPAQVA*VMVFYHNNRNP Trigger: GGGGTTCCTATTGTTGTGATAAAACACCATGACCAAAGCAACTTGGGCAGGAAAGGGTTTGTTTGGCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | TTTCTATCATTCCTAAGTGACGCAAATCACTCACATTaGCTAAGAATAGACACAGTCTGTCGGACTATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLSDANHSH*LRIDTVCRTIA Trigger: TGCTATAGTCCGACAGACTGTGTCTATTCTTAGCAAATGTGAGTGATTTGCGTCACTTAGGAATGATAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| 3UTR CAA 72 bp | ATAGGAACCCCAAGACACCACATATACTACACAGCATaGTACACATTACACATACCACGTATCATGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IGTPRHHIYYTA*YTLHIPRIMKH Trigger: ATGTTTCATGATACGTGGTATGTGTAATGTGTACAATGCTGTGTAGTATATGTGGTGTCTTGGGGTTCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS TCA 90 bp | GGCCGGGATTGGAGAGCCGGCCCCGTGAAGAGCGACGCCTCCTGGTaGAACGTGGCCACGGTGAAGCTACGTCTGGAGCTGCGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRDWRAGPVKSDASW*NVATVKLRLELRSG Trigger: CCCAGAGCGCAGCTCCAGACGTAGCTTCACCGTGGCCACGTTTCACCAGGAGGCGTCGCTCTTCACGGGGCCGGCTCTCCAATCCCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS-3UTR CAA 90 bp | AACCCCACCCCCAAATCTCTCCAGACCCAAGCCTGTCTCTCTGGATCCTTCCTGCGGCAGTGGCCGGGATaGGAGAGCCGGCCCCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NPTPKSLQTQACLSGSFLRQWPG*ESRPRE Trigger: TTCACGGGGCCGGCTCTCCAATCCCGGCCACTGCCG...CAGGAAGGATCCAGAGAGACAGGCTTGGGTCTGGAGAGATTTGGGGGTGGGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS TCA 90 bp | CACGGTGAAGCTACGTCTGGAGCTGCGCTCTGGGTCTTGGGTGTGTaGGTCATAGCTGAAGTAGCAGAGGATGCAGGTAATGGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGEATSGAALWVLGV*VIAEVAEDAGNGHG Trigger: ACCATGGCCATTACCTGCATCCTCTGCTACTTCAGCTATGACTCACACACCCAAGACCCAGAGCGCAGCTCCAGACGTAGCTTCACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS TCA 72 bp | GCCGCGGCAGTGGCCGGGATTGGAGAGCCGGCCCCGTaGAGAGCGACGCCTCCTGGTGAAACGTGGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAVAGIGEPAP*RATPPGETWPR Trigger: CCGTGGCCACGTTTCACCAGGAGGCGTCGCTCTTCACGGGGCCGGCTCTCCAATCCCGGCCACTGCCGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS CCA 72 bp | GTCCAGAAGTTCTGGGGCCGCGGCAGTGGCCGGGATTaGAGAGCCGGCCCCGTGAAGAGCGACGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VQKFWGRGSGRD*RAGPVKSDASW Trigger: CCAGGAGGCGTCGCTCTTCACGGGGCCGGCTCTCCAATCCCGGCCACTGCCGCGGCCCCAGAACTTCTGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS TCA 72 bp | TGGAGAGCCGGCCCCGTGAAGAGCGACGCCTCCTGGTaGAACGTGGCCACGGTGAAGCTACGTCTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WRAGPVKSDASW*NVATVKLRLEL Trigger: CAGCTCCAGACGTAGCTTCACCGTGGCCACGTTTCACCAGGAGGCGTCGCTCTTCACGGGGCCGGCTCTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS CCA 72 bp | TCACACAACAGTCCAGAAGTTCTGGGGCCGCGGCAGTaGCCGGGATTGGAGAGCCGGCCCCGTGAAGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SHNSPEVLGPRQ*PGLESRPREER Trigger: TCGCTCTTCACGGGGCCGGCTCTCCAATCCCGGCCACTGCCGCGGCCCCAGAACTTCTGGACTGTTGTGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS CAA 90 bp | TCACACAACAGTCCAGAAGTTCTGGGGCCGCGGCAGTGGCCGGGATaGGAGAGCCGGCCCCGTGAAGAGCGACGCCTCCTGGTGAAACGT | + |
|
Preference number: 6 (lower is better) Translates to: SHNSPEVLGPRQWPG*ESRPREERRLLVKR Trigger: ACGTTTCACCAGGAGGCGTCGCTCTTCACGGGGCCGGCTCTCCAATCCCGGCCACTGCCGCGGCCCCAGAACTTCTGGACTGTTGTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||
| CDS TCA 72 bp | GCTACGTCTGGAGCTGCGCTCTGGGTCTTGGGTGTGTaGGTCATAGCTGAAGTAGCAGAGGATGCAGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: ATSGAALWVLGV*VIAEVAEDAGN Trigger: ATTACCTGCATCCTCTGCTACTTCAGCTATGACTCACACACCCAAGACCCAGAGCGCAGCTCCAGACGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131248.2 |
||