Pregenerated sensors for SPA17 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001948

Ensembl transcript IDs: ENSMUST00000002013.11, ENSMUST00000214786.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	ACCTCTTCTCTAGCCACGTGTCCCCGGAAGAGGGACTaGATTTTGAGAGCAGCCGCCTCCTCCTGTTCTCTT	+
Preference number: 6 (lower is better) Translates to: TSSLATCPRKRD*ILRAAASSCSL Trigger: AAGAGAACAGGAGGAGGCGGCTGCTCTCAAAATCCAGTCCCTCTTCCGGGGACACGTGGCTAGAGAAGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002013.11
CDS CAA 72 bp	CTCCCGTGTCAGCCCTTCAAGAAGATTTCCAAATCCTaGTGGAATTCGGTAGTGGGTGTTGGAGAAAGGAAT	+
Preference number: 6 (lower is better) Translates to: LPCQPFKKISKS*WNSVVGVGERN Trigger: ATTCCTTTCTCCAACACCCACTACCGAATTCCACAAGGATTTGGAAATCTTCTTGAAGGGCTGACACGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002013.11 ENSMUST00000214786.2

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