Pregenerated sensors for SP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068859Ensembl transcript IDs: ENSMUST00000090813.6
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTaGTCCACCTCGCTCCCAGCCTGGGCTCCGGGGGCTTCTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GNSGAASKPPPGVPR*STSLPAWAPGASLE Trigger: CTCCAGAGAAGCCCCCGGAGCCCAGGCTGGGAGCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGTTGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 90 bp | CCCAGCCTGGGCTCCGGGGGCTTCTCTGGAGCCCCTGCCCTCCCGTaGGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: PSLGSGGFSGAPALP*AHSLALRTSRSLAL Trigger: CAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGGAGGGCAGGGGCTCCAGAGAAGCCCCCGGAGCCCAGGCTGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 90 bp | AGGATGGCTCGCTTTTGTTTCTGGACCTCGAGATCGATTCTCATCTaGGCGCAACGGGTTGAGGGCAACTCCGGCGCCGCCAGCAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RMARFCFWTSRSILI*AQRVEGNSGAASKP Trigger: TGGCTTGCTGGCGGCGCCGGAGTTGCCCTCAACCCGTTGCGCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR TCA 90 bp | TGTGTATTGCTCTTCTCTGGAGAAGTTTGTTCGAGTGGGTGCCTGTaGGTGCGCGCGCGGGAGTGTGCGTTCTTGCGTTTGTGGGACTCC | + |
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Preference number: 1 (lower is better) Translates to: CVLLFSGEVCSSGCL*VRARECAFLRLWDS Trigger: GGAGTCCCACAAACGCAAGAACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCAGAGAAGAGCAATACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 90 bp | GGGACATTTCTGTGTATTGCTCTTCTCTGGAGAAGTTTGTTCGAGTaGGTGCCTGTGAGTGCGCGCGCGGGAGTGTGCGTTCTTGCGTTT | + |
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Preference number: 1 (lower is better) Translates to: GTFLCIALLWRSLFE*VPVSARAGVCVLAF Trigger: AAACGCAAGAACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCAGAGAAGAGCAATACACAGAAATGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 90 bp | AAGCCACTGAACCTCACGCTGCAGACTCCCCGCTGGGAACCTTCCTaGTGTTTCTCGTTGCCTTGCTATTTGGCTCTTCAGAGCAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: KPLNLTLQTPRWEPS*CFSLPCYLALQSSF Trigger: AAAACTGCTCTGAAGAGCCAAATAGCAAGGCAACGAGAAACAGCAGGAAGGTTCCCAGCGGGGAGTCTGCAGCGTGAGGTTCAGTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 90 bp | GTTTTGAACCTGCACTTATGTCGGAGGATGGCTCGCTTTTGTTTCTaGACCTCGAGATCGATTCTCATCTGGGCGCAACGGGTTGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: VLNLHLCRRMARFCF*TSRSILIWAQRVEG Trigger: GCCCTCAACCCGTTGCGCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGACATAAGTGCAGGTTCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR TCA 90 bp | CAAAGAAGGCAGAGAGCATCCTTGAACCTTTTCAGAAGCAGCCACTaGTATTCAAATAACCTGCGAGGGCCATTTGACGGCGAGGGGACC | + |
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Preference number: 1 (lower is better) Translates to: QRRQRASLNLFRSSH*YSNNLRGPFDGEGT Trigger: GGTCCCCTCGCCGTCAAATGGCCCTCGCAGGTTATTTGAATATCAGTGGCTGCTTCTGAAAAGGTTCAAGGATGCTCTCTGCCTTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACCCTGCGAGGGCCATTTaGCGGCGAGGGGACCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDPARAI*RRGDLG Trigger: GCCTAGGTCCCCTCGCCGTCAAATGGCCCTCGCAGG...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACCTTCTCTGGAGCCCCTaGCCTCCCGTGCGCCCACTC | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDLLWSP*PPVRPL Trigger: GAGTGGGCGCACGGGAGGGCAGGGGCTCCAGAGAAG...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACGTGGGTGCCTGTGAGTaGGCGCGCGGGAGTGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDVGACE*ARGSVR Trigger: ACGCACACTCCCGCGCGCGCACTCACAGGCACCCAC...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACCGCTGGGAACCTTCCTaGTGTTTCTCGTTGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDRWEPS*CFSLPC Trigger: GCAAGGCAACGAGAAACAGCAGGAAGGTTCCCAGCG...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACCCAGGCAGAAATGGATaGGCCGGGAGAGAAAATGAC | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDPGRNG*AGREND Trigger: GTCATTTTCTCTCCCGGCTCATCCATTTCTGCCTGG...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CCA 90 bp | TCGGAGGATGGCTCGCTTTTGTTTCTGGACCTCGAGATCGATTCTCATCTGGGCCTCCGGGGGCTTCTCTaGAGCCCCTGCCCTCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: SEDGSLLFLDLEIDSHLGLRGLL*SPCPPV Trigger: CACGGGAGGGCAGGGGCTCCAGAGAAGCCCCCGGAG...GCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACAGCCGGGAGAGAAAATaGCCGAAGAGAAGGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDSRERK*PKRRKT Trigger: AGTTTTCCTTCTCTTCGGTCATTTTCTCTCCCGGCT...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACTTCATTCGAAAGTTCTaGCAGTCCTTTGCTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDFIRKF*QSFAEW Trigger: CCACTCAGCAAAGGACTGTCAGAACTTTCGAATGAA...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACACTTATGTCGGAGGATaGCTCGCTTTTGTTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDTYVGG*LAFVSG Trigger: TCCAGAAACAAAAGCGAGCCATCCTCCGACATAAGT...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACAAGAGACTGTCTAAATaGGATTCCTGTCCCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDKRLSK*DSCPKC Trigger: ACATTTGGGACAGGAATCTCATTTAGACAGTCTCTT...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCCTCGCTCGCTCGCTCTaGGTGTCTCTACTTGCTCGC | + |
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Preference number: 2 (lower is better) Translates to: DCLNEIPVPNVFPGLIPALARSL*VSLLAR Trigger: GCGAGCAAGTAGAGACACCCAGAGCGAGCGAGCGAG...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACCCACATAAACTTCATTaGCTACAACTAACATTAAGG | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDPHKLH*LQLTLR Trigger: CCTTAATGTTAGTTGTAGGCAATGAAGTTTATGTGG...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACCTTTACCGTTTGACATaGAAATTTGGTGCAGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: PARTHLRTSSLQTLDARDLYRLT*KFGAVN Trigger: ATTAACTGCACCAAATTTGCATGTCAAACGGTAAAG...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CAA 90 bp | GTGTGTAGTTTTGAACCTGCACTTATGTCGGAGGATGGCTCGCTTTaGTTTCTGGACCTCGAGATCGATTCTCATCTGGGCGCAACGGGT | + |
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Preference number: 2 (lower is better) Translates to: VCSFEPALMSEDGSL*FLDLEIDSHLGATG Trigger: ACCCGTTGCGCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGACATAAGTGCAGGTTCAAAACTACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CAA 90 bp | GGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTTaGAACCTGCACTTATGTCGGAGGATGGCTCGCTTTTGTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GWCVCVCVCVCVCVV*NLHLCRRMARFCFW Trigger: CCAGAAACAAAAGCGAGCCATCCTCCGACATAAGTGCAGGTTCAAAACTACACACACACACACACACACACACACACACACACACCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR TCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCCTGACAGTCCTTTGCTaGGTGGTAGCTAGTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: DCLNEIPVPNVFPGLIPALTVLC*VVASFC Trigger: ACAAAAACTAGCTACCACTCAGCAAAGGACTGTCAG...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCAATAAGACGCCGCACTaGGTAATCACAAAGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: DCLNEIPVPNVFPGLIPANKTPH*VITKKA Trigger: TGCCTTCTTTGTGATTACGCAGTGCGGCGTCTTATT...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCCAGGGGGCTGCTGTGTaGTCTAAGTCAAAATTAATA | + |
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Preference number: 2 (lower is better) Translates to: DCLNEIPVPNVFPGLIPAQGAAV*SKSKLI Trigger: TATTAATTTTGACTTAGAGCACACAGCAGCCCCCTG...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCGTGTGCTATGGCTTTTaGAACCCACATAAACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: DCLNEIPVPNVFPGLIPAVCYGF*NPHKLH Trigger: ATGAAGTTTATGTGGGTTGCAAAAGCCATAGCACAC...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR GCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCCATTTTATCTCAGGTTaGCCTTTACCGTTTGACATG | + |
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Preference number: 2 (lower is better) Translates to: DCLNEIPVPNVFPGLIPAHFISG*PLPFDM Trigger: CATGTCAAACGGTAAAGGGCAACCTGAGATAAAATG...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR TCA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTATGTGTTCCCAGGCCTaGTCCCAGCCTTTAATTATT | + |
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Preference number: 2 (lower is better) Translates to: GKFIAADSPCSFYCVRSLMCSQA*SQPLII Trigger: AATAATTAAAGGCTGGGATCAGGCCTGGGAACACAT...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 72 bp | GGCTCCGGGGGCTTCTCTGGAGCCCCTGCCCTCCCGTaGGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCG | + |
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Preference number: 3 (lower is better) Translates to: GSGGFSGAPALP*AHSLALRTSRS Trigger: CGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGGAGGGCAGGGGCTCCAGAGAAGCCCCCGGAGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 72 bp | TTCGAGTGGGTGCCTGTGAGTGCGCGCGCGGGAGTGTaGGTTCTTGCGTTTGTGGGACTCCGGGGTGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: FEWVPVSARAGV*VLAFVGLRGGV Trigger: CACACCACCCCGGAGTCCCACAAACGCAAGAACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACAGGCAGAGAGCATCCTaGAACCTTTTCAGAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PARTHLRTSSLQTLDARDRQRAS*NLFRSS Trigger: GCTGCTTCTGAAAAGGTTCAAGGATGCTCTCTGCCT...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 72 bp | CGCTTTTGTTTCTGGACCTCGAGATCGATTCTCATCTaGGCGCAACGGGTTGAGGGCAACTCCGGCGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: RFCFWTSRSILI*AQRVEGNSGAA Trigger: GGCGGCGCCGGAGTTGCCCTCAACCCGTTGCGCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 72 bp | TTCTCCTTAAGACCAGACCCAAACTCGAAGACGCTTTaGGGCTGGGGGTGCGGGGCGTCCCAGGCAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: FSLRPDPNSKTL*GWGCGASQAEM Trigger: CATTTCTGCCTGGGACGCCCCGCACCCCCAGCCCCAAAGCGTCTTCGAGTTTGGGTCTGGTCTTAAGGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACGGACATTTCTGTGTATaGCTCTTCTCTGGAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: PARTHLRTSSLQTLDARDGHFCV*LFSGEV Trigger: AACTTCTCCAGAGAAGAGCAATACACAGAAATGTCC...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR TCA 72 bp | CTCTTCTCTGGAGAAGTTTGTTCGAGTGGGTGCCTGTaGGTGCGCGCGCGGGAGTGTGCGTTCTTGCGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LFSGEVCSSGCL*VRARECAFLRL Trigger: CAAACGCAAGAACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCAGAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 72 bp | GAGCCTCTGCCTCAAACCCCCAGGATGAGCGTACTCTaGCACAGCTTCTCCTTAAGACCAGACCCAAACTCG | + |
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Preference number: 3 (lower is better) Translates to: EPLPQTPRMSVL*HSFSLRPDPNS Trigger: CGAGTTTGGGTCTGGTCTTAAGGAGAAGCTGTGGCAGAGTACGCTCATCCTGGGGGTTTGAGGCAGAGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 72 bp | CTGTGTATTGCTCTTCTCTGGAGAAGTTTGTTCGAGTaGGTGCCTGTGAGTGCGCGCGCGGGAGTGTGCGTT | + |
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Preference number: 3 (lower is better) Translates to: LCIALLWRSLFE*VPVSARAGVCV Trigger: AACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCAGAGAAGAGCAATACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 72 bp | AACCTCACGCTGCAGACTCCCCGCTGGGAACCTTCCTaGTGTTTCTCGTTGCCTTGCTATTTGGCTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: NLTLQTPRWEPS*CFSLPCYLALQ Trigger: CTGAAGAGCCAAATAGCAAGGCAACGAGAAACAGCAGGAAGGTTCCCAGCGGGGAGTCTGCAGCGTGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 72 bp | CTGCACTTATGTCGGAGGATGGCTCGCTTTTGTTTCTaGACCTCGAGATCGATTCTCATCTGGGCGCAACGG | + |
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Preference number: 3 (lower is better) Translates to: LHLCRRMARFCF*TSRSILIWAQR Trigger: CCGTTGCGCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGACATAAGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR CCA 72 bp | GATCTGCCTTTATTATCAACAAGAAACAAAGCTGCCTaGGACCGACGTCCCGGCGCCCTCATTCCTCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: DLPLLSTRNKAA*DRRPGALIPQE Trigger: TTCCTGAGGAATGAGGGCGCCGGGACGTCGGTCCCAGGCAGCTTTGTTTCTTGTTGATAATAAAGGCAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CAA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTTCTGGGTGTCTCTACTaGCTCGCTCGCGCCTCTCCG | + |
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Preference number: 3 (lower is better) Translates to: GKFIAADSPCSFYCVRSLSGCLY*LARASP Trigger: CGGAGAGGCGCGAGCGAGCAAGTAGAGACACCCAGA...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 72 bp | ACCTTTTCAGAAGCAGCCACTGATATTCAAATAACCTaGGAGGGCCATTTGACGGCGAGGGGACCTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TFSEAATDIQIT*EGHLTARGPRH Trigger: ATGCCTAGGTCCCCTCGCCGTCAAATGGCCCTCGCAGGTTATTTGAATATCAGTGGCTGCTTCTGAAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR GCA 72 bp | AGACTCCCCGCTGGGAACCTTCCTGCTGTTTCTCGTTaGCTTGCTATTTGGCTCTTCAGAGCAGTTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: RLPAGNLPAVSR*LAIWLFRAVFV Trigger: AACAAAAACTGCTCTGAAGAGCCAAATAGCAAGGCAACGAGAAACAGCAGGAAGGTTCCCAGCGGGGAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CAA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCGTCTTTTCCGGGGTATaGACTCTAGCGATTTATTCC | + |
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Preference number: 3 (lower is better) Translates to: DCLNEIPVPNVFPGLIPAVFSGV*TLAIYS Trigger: GGAATAAATCGCTAGAGTCAATACCCCGGAAAAGAC...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR TCA 72 bp | CAGAGAGCATCCTTGAACCTTTTCAGAAGCAGCCACTaGTATTCAAATAACCTGCGAGGGCCATTTGACGGC | + |
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Preference number: 3 (lower is better) Translates to: QRASLNLFRSSH*YSNNLRGPFDG Trigger: GCCGTCAAATGGCCCTCGCAGGTTATTTGAATATCAGTGGCTGCTTCTGAAAAGGTTCAAGGATGCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR-3UTR CAA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTTGTGTGTGTGTAGTTTaGAACCTGCACTTATGTCGG | + |
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Preference number: 3 (lower is better) Translates to: GKFIAADSPCSFYCVRSLCVCVV*NLHLCR Trigger: CCGACATAAGTGCAGGTTCAAAACTACACACACACA...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| 3UTR TCA 72 bp | GCACTGCGTAATCACAAAGAAGGCAGAGAGCATCCTTaGACCTTTTCAGAAGCAGCCACTGATATTCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: ALRNHKEGREHP*TFSEAATDIQI Trigger: TATTTGAATATCAGTGGCTGCTTCTGAAAAGGTTCAAGGATGCTCTCTGCCTTCTTTGTGATTACGCAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| 3UTR GCA 72 bp | GTGTGCTATGGCTTTTGCAACCCACATAAACTTCATTaGCTACAACTAACATTAAGGGAATTTGTTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VCYGFCNPHKLH*LQLTLREFVSQ Trigger: TTGGGAAACAAATTCCCTTAATGTTAGTTGTAGGCAATGAAGTTTATGTGGGTTGCAAAAGCCATAGCACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| 3UTR GCA 72 bp | CTAATAAGGGAATACAAGGCACAGGGGGCTGCTGTGTaGTCTAAGTCAAAATTAATAACATTTAACAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LIREYKAQGAAV*SKSKLITFNKI Trigger: AATCTTGTTAAATGTTATTAATTTTGACTTAGAGCACACAGCAGCCCCCTGTGCCTTGTATTCCCTTATTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCGGTGGAAGCCGCCTTTaGCGAAGGCGCTGGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRGGSRL*RRRWTR Trigger: CCGAGTCCAGCGCCTTCGCCAAAGGCGGCTTCCACC...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCGACCCAGGGCTGCTGTaGACGTCCCACCACGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRDPGLL*TSHHDD Trigger: GTCATCGTGGTGGGACGTGCACAGCAGCCCTGGGTC...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCCTTTGGCGAAGGCGCTaGACTCGGGCAGGGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRLWRRR*TRAGSS Trigger: TGACGACCCTGCCCGAGTCCAGCGCCTTCGCCAAAG...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCAGCCGAGGTTGCAGCTaGACGAGGAGCGCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRSRGCS*TRSASR Trigger: CCTGGAAGCGCTCCTCGTCCAGCTGCAACCTCGGCT...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCCCAGCAGGTGCTGGCTaGTGGAGAGCAGGTGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRPAGAG*WRAGAK Trigger: CTTCGCACCTGCTCTCCACCAGCCAGCACCTGCTGG...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCGAGCTGAAGGCCGAGTaGGTGAGCGAGCTGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRELKAE*VSELKS Trigger: CGACTTCAGCTCGCTCACGCACTCGGCCTTCAGCTC...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCGGGGTGTCTCCAGGTTaGTGGCGTCCGTGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRGVSPG*WRPCHC Trigger: ACAGTGACACGGACGCCAGCAACCTGGAGACACCCC...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | CCCGTGCGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTACGACGTGGGGGACGTaGAGGCCAGGCAGAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVRPLARPPNLSLARSGCTTWGT*RPGRRR Trigger: GCGCCTTCTGCCTGGCCTCCACGTCCCCCACGTCGT...ACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | CCCGTGCGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTGACTGGAGCCGAGGTTaGAGCTGGACGAGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVRPLARPPNLSLARSGCDWSRG*SWTRSA Trigger: AGCGCTCCTCGTCCAGCTGCAACCTCGGCTCCAGTC...ACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | TCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTCTCTACTTGCTCGGAGTGCAGCGAGGCCTaGGGGGCGCCCGAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLALRTSRSLALGVSTCSECSEA*GAPECS Trigger: GCTGCACTCGGGCGCCCCCCAGGCCTCGCTGCACTC...CGAGCAAGTAGAGACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACTGTGCACCTTGGAGATaGAGGCCGACTGGCCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PARTHLRTSSLQTLDARDCAPWR*RPTGRP Trigger: CGGGCGGCCAGTCGGCCTTCATCTCCAAGGTGCACA...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | CCCGTGCGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTAGTCGGGGTTGTAGGTaGCCAGCTGAGAGTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVRPLARPPNLSLARSGCSRGCR*PAESAA Trigger: CGCTGCACTCTCAGCTGGGCACCTACAACCCCGACT...ACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCGGTCGTTCCGAAGCGTaGCTCTTCCCCAAGTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPAPPASHRPGFRAAPPRGRSEA*LFPKYR Trigger: TCTATACTTGGGGAAGAGCCACGCTTCGGAACGACC...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | TCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTCTCTACTTGCTCGGGCAGAAGGCGCTGTTaGCGGCTCCCGAGCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLALRTSRSLALGVSTCSGRRRC*RLPSHP Trigger: CGGGTGGCTCGGGAGCCGCCAACAGCGCCTTCTGCC...CGAGCAAGTAGAGACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | CCCGTGCGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTGTGTCTCCAGGTTGCTaGCGTCCGTGTCACTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVRPLARPPNLSLARSGCVSPGC*RPCHCR Trigger: GCGACAGTGACACGGACGCCAGCAACCTGGAGACAC...ACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR TCA 90 bp | TCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTCTCTACTTGCTCGCGCCATAGTCGCTGCTaGAGGCGGACGACGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLALRTSRSLALGVSTCSRHSRC*RRTTWG Trigger: CCCCCACGTCGTCCGCCTTCAGCAGCGACTATGGCG...CGAGCAAGTAGAGACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | CCCGTGCGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTCCGCCGCCCCCGTTGTaGGTCTTAATGTGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVRPLARPPNLSLARSGCPPPPL*VLMCLL Trigger: GAGCAAACACATTAAGACGCACAACGGGGGCGGCGG...ACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCGCACTCACCTCCGCACCTCCAGCCTGCAGACCCTAGACGCACGGGACGCCGCTAGGGTCGAGTaGAAGCCCGACTTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PARTHLRTSSLQTLDARDAARVE*KPDLYH Trigger: GTGGTACAAGTCGGGCTTCCACTCGACCCTAGCGGC...GTCCCGTGCGTCTAGGGTCTGCAGGCTGGAGGTGCGGAGGTGAGTGCGAGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAGTTTGTTCGAGTGGGTGCCTGTGAGTGCGCGCGCGGGAGTGTGCGTTGGCTTGAAGCCGTCCTaGGCCAGCAGGTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRSLFEWVPVSARAGVCVGLKPS*ASRCWL Trigger: CAGCCAGCACCTGCTGGCCCAGGACGGCTTCAAGCC...AACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | TCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTCTCTACTTGCTCGTGTTGCCGATCTTGTTaGAGGTCGCCGCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLALRTSRSLALGVSTCSCCRSC*RSPPAW Trigger: CCATGCTGGCGGCGACCTGCAACAAGATCGGCAACA...CGAGCAAGTAGAGACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | TCGGAGGATGGCTCGCTTTTGTTTCTGGACCTCGAGATCGATTCTCATCTGGGCCTGGTGGAGAGCAGGTaGGAAGCGGCGGCGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEDGSLLFLDLEIDSHLGLVESR*EAAAAD Trigger: GTCGGCCGCCGCCGCTTCGCACCTGCTCTCCACCAG...GCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR TCA 90 bp | TCGGAGGATGGCTCGCTTTTGTTTCTGGACCTCGAGATCGATTCTCATCTGGGCAGGGCAGCACCGGCTTaGAGCCGTCCTGGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEDGSLLFLDLEIDSHLGRAAPA*SRPGPA Trigger: TGCTGGCCCAGGACGGCTTCAAGCCGGTGCTGCCCT...GCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAGTTTGTTCGAGTGGGTGCCTGTGAGTGCGCGCGCGGGAGTGTGCGTTTCAGGGGGCTCGTGTTaGCGATCTTGTTGCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WRSLFEWVPVSARAGVCVSGGSC*RSCCRS Trigger: CGACCTGCAACAAGATCGGCAACACGAGCCCCCTGA...AACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | TCGGAGGATGGCTCGCTTTTGTTTCTGGACCTCGAGATCGATTCTCATCTGGGCATGACGCCGCGCCGTTaGTCACCTCGCCCGCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SEDGSLLFLDLEIDSHLGMTPRR*SPRPPL Trigger: TAGCGGCGGGCGAGGTGACCAACGGCGCGGCGTCAT...GCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | TCGGAGGATGGCTCGCTTTTGTTTCTGGACCTCGAGATCGATTCTCATCTGGGCAGGTCGCCGCCAGCATaGCCAACGGGGTCGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SEDGSLLFLDLEIDSHLGRSPPA*PTGSFR Trigger: TCGGAACGACCCCGTTGGCCATGCTGGCGGCGACCT...GCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCGAGCGCTTCCAGGGGTaGAAGCCGCCTTTGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DCLNEIPVPNVFPGLIPAERFQG*KPPLAK Trigger: CTTCGCCAAAGGCGGCTTCCACCCCTGGAAGCGCTC...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCCGAAGCCGGAGAGACTaGAGCCGAGGTTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCLNEIPVPNVFPGLIPARSRRD*SRGCSW Trigger: CCAGCTGCAACCTCGGCTCCAGTCTCTCCGGCTTCG...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR TCA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTCACGTCCCACCACGATaGCGCCGCGCCGTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKFIAADSPCSFYCVRSLHVPPR*RRAVGH Trigger: GTGACCAACGGCGCGGCGTCATCGTGGTGGGACGTG...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTGCCAGGACCCAGGGCTaGTGTGCACGTCCCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: GKFIAADSPCSFYCVRSLARTQG*CARPTT Trigger: CGTGGTGGGACGTGCACAGCAGCCCTGGGTCCTGGC...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CCA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTGCAGGTGCTGGCTGGTaGAGAGCAGGTGCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKFIAADSPCSFYCVRSLAGAGW*RAGAKR Trigger: CCGCTTCGCACCTGCTCTCCACCAGCCAGCACCTGC...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR GCA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTCTGACGCCGGAATCGTaGAGGATGAGGTCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKFIAADSPCSFYCVRSLLTPES*RMRSGD Trigger: GTCCCCGGACCTCATCCTGCACGATTCCGGCGTCAG...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| 3UTR CAA 72 bp | GCAGCCACTGATATTCAAATAACCTGCGAGGGCCATTaGACGGCGAGGGGACCTAGGCATTTCCAATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AATDIQITCEGH*TARGPRHFQFT Trigger: AGTGAATTGGAAATGCCTAGGTCCCCTCGCCGTCAAATGGCCCTCGCAGGTTATTTGAATATCAGTGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| 3UTR CAA 72 bp | TTTGAACCTGCACTTATGTCGGAGGATGGCTCGCTTTaGTTTCTGGACCTCGAGATCGATTCTCATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FEPALMSEDGSL*FLDLEIDSHLG Trigger: GCCCAGATGAGAATCGATCTCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGACATAAGTGCAGGTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| 3UTR CAA 72 bp | CATTTCCAATTCACTATTTGCATAGATCAGCCGTCTTaGAAAAGGAAAGGAGCAGTTGTCTTCCATAACATT | + |
|
Preference number: 4 (lower is better) Translates to: HFQFTICIDQPS*KRKGAVVFHNI Trigger: AATGTTATGGAAGACAACTGCTCCTTTCCTTTTCAAAGACGGCTGATCTATGCAAATAGTGAATTGGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| 3UTR CAA 72 bp | AACGTTTACATTTTATCTCAGGTTGCCCTTTACCGTTaGACATGCAAATTTGGTGCAGTTAATTTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NVYILSQVALYR*TCKFGAVNLDN Trigger: ATTGTCTAAATTAACTGCACCAAATTTGCATGTCAAACGGTAAAGGGCAACCTGAGATAAAATGTAAACGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS GCA 90 bp | TGCCGCTGCCGCCGCCGCCGCTGCCGCCGCCGCAGCCGCCCGGGCTaGACTGACGCCGGAATCGTGCAGGATGAGGTCCGGGGACTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CRCRRRRCRRRSRPG*TDAGIVQDEVRGLG Trigger: TCCGAGTCCCCGGACCTCATCCTGCACGATTCCGGCGTCAGTGCAGCCCGGGCGGCTGCGGCGGCGGCAGCGGCGGCGGCGGCAGCGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS CCA 90 bp | AGGCGGACGACGTGGGGGACGTGGAGGCCAGGCAGAAGGCGCTGTTaGCGGCTCCCGAGCCACCCGCCAGGCTGCCCGAGCCGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRTTWGTWRPGRRRC*RLPSHPPGCPSRGR Trigger: GCGGCCGCGGCTCGGGCAGCCTGGCGGGTGGCTCGGGAGCCGCCAACAGCGCCTTCTGCCTGGCCTCCACGTCCCCCACGTCGTCCGCCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS GCA 90 bp | CCAGGCAGAAGGCGCTGTTGGCGGCTCCCGAGCCACCCGCCAGGCTaGCCGAGCCGCGGCCGCCCGTGGCCACAGCGAAGCCGGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGRRRCWRLPSHPPG*PSRGRPWPQRSRRD Trigger: GTCTCTCCGGCTTCGCTGTGGCCACGGGCGGCCGCGGCTCGGGCAGCCTGGCGGGTGGCTCGGGAGCCGCCAACAGCGCCTTCTGCCTGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS TCA 90 bp | CGCGCGGGTACAGACCGTCGGCCGCCGTCGTGTGCACCTTGGAGATaGAGGCCGACTGGCCGCCCGCCTCCTGCGGGGACACGCCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAGTDRRPPSCAPWR*RPTGRPPPAGTRRP Trigger: CGGCCGGCGTGTCCCCGCAGGAGGCGGGCGGCCAGTCGGCCTTCATCTCCAAGGTGCACACGACGGCGGCCGACGGTCTGTACCCGCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CAA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCGGGTGGAAGCCGCCTTaGGCGAAGGCGCTGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: TPAPPASHRPGFRAAPPRGWKPP*AKALDS Trigger: CGAGTCCAGCGCCTTCGCCAAAGGCGGCTTCCACCC...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CAA 90 bp | CCCGTGCGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTGATGACGCCGCGCCGTaGGTCACCTCGCCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVRPLARPPNLSLARSGCDDAAP*VTSPAA Trigger: AGCGGCGGGCGAGGTGACCAACGGCGCGGCGTCATC...ACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS-3UTR CAA 90 bp | ACTCCGGCGCCGCCAGCAAGCCACCGCCCGGGGTTCCGCGCTGCTCCACCTCGCCGGGGTGTCTCCAGGTaGCTGGCGTCCGTGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TPAPPASHRPGFRAAPPRRGVSR*LASVSL Trigger: CAGTGACACGGACGCCAGCAACCTGGAGACACCCCG...GCGAGGTGGAGCAGCGCGGAACCCCGGGCGGTGGCTTGCTGGCGGCGCCGGAGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS TCA 90 bp | CCGCCGCCGCCGCCGAGTTGGAGAAAAGGCCGCCATAGTCGCTGCTaGAGGCGGACGACGTGGGGGACGTGGAGGCCAGGCAGAAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPPPPSWRKGRHSRC*RRTTWGTWRPGRRR Trigger: GCGCCTTCTGCCTGGCCTCCACGTCCCCCACGTCGTCCGCCTTCAGCAGCGACTATGGCGGCCTTTTCTCCAACTCGGCGGCGGCGGCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
||
| CDS GCA 90 bp | TGGCGAAGGCGCTGGACTCGGGCAGGGTCGTCAGGGGGCTCGTGTTaGCGATCTTGTTGCAGGTCGCCGCCAGCATGGCCAACGGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRRRWTRAGSSGGSC*RSCCRSPPAWPTGS Trigger: CGACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGAGTCCAGCGCCTTCGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CCA 90 bp | ACCCAGGGCTGCTGTGCACGTCCCACCACGATGACGCCGCGCCGTTaGTCACCTCGCCCGCCGCTAGGGTCGAGTGGAAGCCCGACTTGT | + |
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Preference number: 5 (lower is better) Translates to: TQGCCARPTTMTPRR*SPRPPLGSSGSPTC Trigger: ACAAGTCGGGCTTCCACTCGACCCTAGCGGCGGGCGAGGTGACCAACGGCGCGGCGTCATCGTGGTGGGACGTGCACAGCAGCCCTGGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | CCCGTGCGCCCACTCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTGTGTTGCCGATCTTGTaGCAGGTCGCCGCCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: PVRPLARPPNLSLARSGCVLPIL*QVAASM Trigger: CATGCTGGCGGCGACCTGCAACAAGATCGGCAACAC...ACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGAGTGGGCGCACGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS GCA 90 bp | TGGACTCGGGCAGGGTCGTCAGGGGGCTCGTGTTGCCGATCTTGTTaGAGGTCGCCGCCAGCATGGCCAACGGGGTCGTTCCGAAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: WTRAGSSGGSCCRSC*RSPPAWPTGSFRSV Trigger: CACGCTTCGGAACGACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGAGTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGTTTGTTCGAGTGGGTGCCTGTGAGTGCGCGCGCGGGAGTGTGCGTTGAGGGCAGCACCGGCTaGAAGCCGTCCTGGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WRSLFEWVPVSARAGVCVEGSTG*KPSWAS Trigger: GCTGGCCCAGGACGGCTTCAAGCCGGTGCTGCCCTC...AACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | TCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTCTCTACTTGCTCGCCCCCGCCGCCCCCGTaGTGCGTCTTAATGTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SLALRTSRSLALGVSTCSPPPPP*CVLMCL Trigger: CAAACACATTAAGACGCACAACGGGGGCGGCGGGGG...CGAGCAAGTAGAGACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | TCGCTCGCCCTCCGAACCTCTCGCTCGCTCGCTCTGGGTGTCTCTACTTGCTCGGAGTGGAAGCCCGACTaGTACCACGACTCGTACGGG | + |
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Preference number: 5 (lower is better) Translates to: SLALRTSRSLALGVSTCSEWKPD*YHDSYG Trigger: CCCGTACGAGTCGTGGTACAAGTCGGGCTTCCACTC...CGAGCAAGTAGAGACACCCAGAGCGAGCGAGCGAGAGGTTCGGAGGGCGAGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGTTTGTTCGAGTGGGTGCCTGTGAGTGCGCGCGCGGGAGTGTGCGTTGTCAGGGGGCTCGTGTaGCCGATCTTGTTGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: WRSLFEWVPVSARAGVCVVRGLV*PILLQV Trigger: GACCTGCAACAAGATCGGCAACACGAGCCCCCTGAC...AACGCACACTCCCGCGCGCGCACTCACAGGCACCCACTCGAACAAACTTCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | GACTGTCTAAATGAGATTCCTGTCCCAAATGTGTTCCCAGGCCTGATCCCAGCCAGGCAGAAGGCGCTGTaGGCGGCTCCCGAGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: DCLNEIPVPNVFPGLIPARQKAL*AAPEPP Trigger: GGGTGGCTCGGGAGCCGCCAACAGCGCCTTCTGCCT...GGCTGGGATCAGGCCTGGGAACACATTTGGGACAGGAATCTCATTTAGACAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTCTCGTGTTGCCGATCTaGTTGCAGGTCGCCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GKFIAADSPCSFYCVRSLLVLPI*LQVAAS Trigger: GCTGGCGGCGACCTGCAACAAGATCGGCAACACGAG...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTGCCGTCGTGTGCACCTaGGAGATGAAGGCCGACTGG | + |
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Preference number: 5 (lower is better) Translates to: GKFIAADSPCSFYCVRSLAVVCT*EMKADW Trigger: CCAGTCGGCCTTCATCTCCAAGGTGCACACGACGGC...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS-3UTR CAA 90 bp | GGGAAATTTATAGCTGCTGACTCCCCTTGCAGTTTCTATTGTGTGAGAAGTCTTCGCATGAAACGCTTGTaGCACACAGGGCAGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: GKFIAADSPCSFYCVRSLRMKRL*HTGQAK Trigger: CTTCGCCTGCCCTGTGTGCAACAAGCGTTTCATGCG...AAGACTTCTCACACAATAGAAACTGCAAGGGGAGTCAGCAGCTATAAATTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS GCA 72 bp | CGCCGCCGCCGCTGCCGCCGCCGCAGCCGCCCGGGCTaGACTGACGCCGGAATCGTGCAGGATGAGGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: RRRRCRRRSRPG*TDAGIVQDEVR Trigger: CCGGACCTCATCCTGCACGATTCCGGCGTCAGTGCAGCCCGGGCGGCTGCGGCGGCGGCAGCGGCGGCGGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CCA 72 bp | ACGTGGGGGACGTGGAGGCCAGGCAGAAGGCGCTGTTaGCGGCTCCCGAGCCACCCGCCAGGCTGCCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: TWGTWRPGRRRC*RLPSHPPGCPS Trigger: GCTCGGGCAGCCTGGCGGGTGGCTCGGGAGCCGCCAACAGCGCCTTCTGCCTGGCCTCCACGTCCCCCACGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS GCA 72 bp | CCCACGCGCGGGTACAGACCGTCGGCCGCCGTCGTGTaGACCTTGGAGATGAAGGCCGACTGGCCGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PTRGYRPSAAVV*TLEMKADWPPA Trigger: GGCGGGCGGCCAGTCGGCCTTCATCTCCAAGGTGCACACGACGGCGGCCGACGGTCTGTACCCGCGCGTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 90 bp | ATGCCCACGCGCGGGTACAGACCGTCGGCCGCCGTCGTGTGCACCTaGGAGATGAAGGCCGACTGGCCGCCCGCCTCCTGCGGGGACACG | + |
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Preference number: 6 (lower is better) Translates to: MPTRGYRPSAAVVCT*EMKADWPPASCGDT Trigger: CGTGTCCCCGCAGGAGGCGGGCGGCCAGTCGGCCTTCATCTCCAAGGTGCACACGACGGCGGCCGACGGTCTGTACCCGCGCGTGGGCAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS GCA 72 bp | GCCGCAGCCGCCCGGGCTGCACTGACGCCGGAATCGTaGAGGATGAGGTCCGGGGACTCGGAACGGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AAAARAALTPES*RMRSGDSERGV Trigger: GACACCCCGTTCCGAGTCCCCGGACCTCATCCTGCACGATTCCGGCGTCAGTGCAGCCCGGGCGGCTGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CCA 72 bp | CGCGGCCGCCCGTGGCCACAGCGAAGCCGGAGAGACTaGAGCCGAGGTTGCAGCTGGACGAGGAGCGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RGRPWPQRSRRD*SRGCSWTRSAS Trigger: GGAAGCGCTCCTCGTCCAGCTGCAACCTCGGCTCCAGTCTCTCCGGCTTCGCTGTGGCCACGGGCGGCCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 72 bp | CGCGGGTACAGACCGTCGGCCGCCGTCGTGTGCACCTaGGAGATGAAGGCCGACTGGCCGCCCGCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGYRPSAAVVCT*EMKADWPPASC Trigger: GCAGGAGGCGGGCGGCCAGTCGGCCTTCATCTCCAAGGTGCACACGACGGCGGCCGACGGTCTGTACCCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS TCA 72 bp | ACAGACCGTCGGCCGCCGTCGTGTGCACCTTGGAGATaGAGGCCGACTGGCCGCCCGCCTCCTGCGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: TDRRPPSCAPWR*RPTGRPPPAGT Trigger: TGTCCCCGCAGGAGGCGGGCGGCCAGTCGGCCTTCATCTCCAAGGTGCACACGACGGCGGCCGACGGTCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 90 bp | GACCCAGGGCTGCTGTGCACGTCCCACCACGATGACGCCGCGCCGTaGGTCACCTCGCCCGCCGCTAGGGTCGAGTGGAAGCCCGACTTG | + |
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Preference number: 6 (lower is better) Translates to: DPGLLCTSHHDDAAP*VTSPAARVEWKPDL Trigger: CAAGTCGGGCTTCCACTCGACCCTAGCGGCGGGCGAGGTGACCAACGGCGCGGCGTCATCGTGGTGGGACGTGCACAGCAGCCCTGGGTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CCA 72 bp | TGCTGTGCACGTCCCACCACGATGACGCCGCGCCGTTaGTCACCTCGCCCGCCGCTAGGGTCGAGTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: CCARPTTMTPRR*SPRPPLGSSGS Trigger: GCTTCCACTCGACCCTAGCGGCGGGCGAGGTGACCAACGGCGCGGCGTCATCGTGGTGGGACGTGCACAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 72 bp | GCGCTGGACTCGGGCAGGGTCGTCAGGGGGCTCGTGTaGCCGATCTTGTTGCAGGTCGCCGCCAGCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALDSGRVVRGLV*PILLQVAASMA Trigger: GGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGAGTCCAGCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 72 bp | CTGCTGTGCACGTCCCACCACGATGACGCCGCGCCGTaGGTCACCTCGCCCGCCGCTAGGGTCGAGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLCTSHHDDAAP*VTSPAARVEWK Trigger: CTTCCACTCGACCCTAGCGGCGGGCGAGGTGACCAACGGCGCGGCGTCATCGTGGTGGGACGTGCACAGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 90 bp | GCGCTGGACTCGGGCAGGGTCGTCAGGGGGCTCGTGTTGCCGATCTaGTTGCAGGTCGCCGCCAGCATGGCCAACGGGGTCGTTCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALDSGRVVRGLVLPI*LQVAASMANGVVPK Trigger: CTTCGGAACGACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGAGTCCAGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 90 bp | TTGGCGAAGGCGCTGGACTCGGGCAGGGTCGTCAGGGGGCTCGTGTaGCCGATCTTGTTGCAGGTCGCCGCCAGCATGGCCAACGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LAKALDSGRVVRGLV*PILLQVAASMANGV Trigger: GACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGAGTCCAGCGCCTTCGCCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS TCA 72 bp | CCGCCGAGTTGGAGAAAAGGCCGCCATAGTCGCTGCTaGAGGCGGACGACGTGGGGGACGTGGAGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PPSWRKGRHSRC*RRTTWGTWRPG Trigger: GCCTGGCCTCCACGTCCCCCACGTCGTCCGCCTTCAGCAGCGACTATGGCGGCCTTTTCTCCAACTCGGCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS GCA 72 bp | CGCTGGACTCGGGCAGGGTCGTCAGGGGGCTCGTGTTaGCGATCTTGTTGCAGGTCGCCGCCAGCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RWTRAGSSGGSC*RSCCRSPPAWP Trigger: TGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGAGTCCAGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CCA 72 bp | GCGCCGTTGGTCACCTCGCCCGCCGCTAGGGTCGAGTaGAAGCCCGACTTGTACCACGACTCGTACGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: APLVTSPAARVE*KPDLYHDSYGC Trigger: GCACCCGTACGAGTCGTGGTACAAGTCGGGCTTCCACTCGACCCTAGCGGCGGGCGAGGTGACCAACGGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 72 bp | TCGGGCAGGGTCGTCAGGGGGCTCGTGTTGCCGATCTaGTTGCAGGTCGCCGCCAGCATGGCCAACGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SGRVVRGLVLPI*LQVAASMANGV Trigger: GACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 90 bp | CTGGACTCGGGCAGGGTCGTCAGGGGGCTCGTGTTGCCGATCTTGTaGCAGGTCGCCGCCAGCATGGCCAACGGGGTCGTTCCGAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: LDSGRVVRGLVLPIL*QVAASMANGVVPKR Trigger: ACGCTTCGGAACGACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCCCGAGTCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS GCA 72 bp | GCAGGGTCGTCAGGGGGCTCGTGTTGCCGATCTTGTTaGAGGTCGCCGCCAGCATGGCCAACGGGGTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: AGSSGGSCCRSC*RSPPAWPTGSF Trigger: GAACGACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CAA 72 bp | GGCAGGGTCGTCAGGGGGCTCGTGTTGCCGATCTTGTaGCAGGTCGCCGCCAGCATGGCCAACGGGGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: GRVVRGLVLPIL*QVAASMANGVV Trigger: AACGACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGAGCCCCCTGACGACCCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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| CDS CCA 72 bp | TCGTGTTGCCGATCTTGTTGCAGGTCGCCGCCAGCATaGCCAACGGGGTCGTTCCGAAGCGTGGCTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SCCRSCCRSPPA*PTGSFRSVALP Trigger: GGGAAGAGCCACGCTTCGGAACGACCCCGTTGGCCATGCTGGCGGCGACCTGCAACAAGATCGGCAACACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090813.6 |
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