Pregenerated sensors for SP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060284Ensembl transcript IDs: ENSMUST00000078508.7, ENSMUST00000229464.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCCAGATGGAAGCTGTGAAGAACAGGGGCAGAGAAGAAAAAGTTaGGGAGGTCGGAGCATAGGAACTAGGCACTGGCAAAGGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RPDGSCEEQGQRRKS*GGRSIGTRHWQRPE Trigger: CTCAGGCCTTTGCCAGTGCCTAGTTCCTATGCTCCGACCTCCTCAACTTTTTCTTCTCTGCCCCTGTTCTTCACAGCTTCCATCTGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR CCA 90 bp | AAAGGGACGATCCCGTCAACGACGTTATGCTCTTCCCAGACTCCATaGCTTTACCCTTTATCTTGGGGCCTAGAAGGAGCAGGGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: KGTIPSTTLCSSQTP*LYPLSWGLEGAGDR Trigger: TCTGTCCCCTGCTCCTTCTAGGCCCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACGGGATCGTCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| 3UTR CCA 90 bp | AATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACGTTTAAGATaGCAGCTGCAAGCTCTCTGTAACCATGACGACAAGGGGATAACC | + |
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Preference number: 1 (lower is better) Translates to: NPPVRWALPQRARLR*QLQALCNHDDKGIT Trigger: GGTTATCCCCTTGTCGTCATGGTTACAGAGAGCTTGCAGCTGCCATCTTAAACGTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR TCA 90 bp | TACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCATTTaGCTAGAATTTCCTTGGGGGCGGGGAGAATCCCTTTCCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: YEQGLHYHLSIQRCI*LEFPWGRGESLSLS Trigger: GGAGAGGGAAAGGGATTCTCCCCGCCCCCAAGGAAATTCTAGTCAAATGCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR CCA 90 bp | CTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTTAAAAGTCACTaGAATGGAGTGAAACCTCCTAGATTGGGGGCCTGTGGATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: LRKGISKAQSGFKSH*NGVKPPRLGACGCL Trigger: TAAACATCCACAGGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| 3UTR TCA 90 bp | GGAAGCAGAAAGATTAGATGGCAACGAGTTAATGAGAAAATGATGTaGGGCCAGATGGAAGCTGTGAAGAACAGGGGCAGAGAAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: GSRKIRWQRVNEKMM*GQMEAVKNRGREEK Trigger: TTTTTCTTCTCTGCCCCTGTTCTTCACAGCTTCCATCTGGCCTCACATCATTTTCTCATTAACTCGTTGCCATCTAATCTTTCTGCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR CCA 90 bp | ATAAATAGAATTATTATTATTATTACTATTACTATTCTTTACTCCTaGCGCATAGGGGTTAAGTACTCAAGGCTGGGGGCAGCCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: INRIIIIITITILYS*RIGVKYSRLGAASL Trigger: CAGGGAGGCTGCCCCCAGCCTTGAGTACTTAACCCCTATGCGCCAGGAGTAAAGAATAGTAATAGTAATAATAATAATAATTCTATTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGCGCGCCAAGAGAGCCTaGCAAGAGGACCCTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: RQGDNLVRSQGMRRGSGERAKRA*QEDPGA Trigger: AGCTCCAGGGTCCTCTTGCCAGGCTCTCTTGGCGCG...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAACGCGCCAAGAGAGCCTaGCAAGAGGACCCTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LAGAGDLSDCLTERHPQKRAKRA*QEDPGA Trigger: AGCTCCAGGGTCCTCTTGCCAGGCTCTCTTGGCGCG...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGGCCAGATGGAAGCTGTaGAGAACAGGGGCAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RQGDNLVRSQGMRRGSGEARWKL*RTGAEK Trigger: CTTCTCTGCCCCTGTTCTTCACAGCTTCCATCTGGC...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACCCCCAGAGTATAGCATaGAATAGGAGAGAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GHLQTKILLLGGLSPKEHPQSIA*NRRERG Trigger: CCCTCGCTCTCTCCTATTGCATGCTATACTCTGGGG...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCGCGAGGGGCAACCAATaGGTCCACCGCGCCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAARGNQ*VHRAKR Trigger: TCTCTTGGCGCGGTGGACCCATTGGTTGCCCCTCGC...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACGGATCAGATCCCCATTaGACTTCCCCCTTCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GHLQTKILLLGGLSPKEHGSDPH*TSPFLA Trigger: TGCCAAGAAGGGGGAAGTCCAATGGGGATCTGATCC...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGCCCCGCCATAGGACTTaGAGTTTCACAGCTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RQGDNLVRSQGMRRGSGEPRHRT*SFTAFW Trigger: CCAGAAAGCTGTGAAACTTCAAGTCCTATGGCGGGG...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAACCCCAGAGTATAGCATaGAATAGGAGAGAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAGAGDLSDCLTERHPQKPQSIA*NRRERG Trigger: CCCTCGCTCTCTCCTATTGCATGCTATACTCTGGGG...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAGGATCAGATCCCCATTaGACTTCCCCCTTCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LAGAGDLSDCLTERHPQKGSDPH*TSPFLA Trigger: TGCCAAGAAGGGGGAAGTCCAATGGGGATCTGATCC...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | CGTCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGAGAGGACCCTGGAGCTaGAGACCTTCCTCTACCCAG | + |
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Preference number: 2 (lower is better) Translates to: RQRRYALPRLHGFTLYLGRGPWS*RPSSTQ Trigger: CTGGGTAGAGGAAGGTCTCCAGCTCCAGGGTCCTCT...CCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| 3UTR-3UTR CCA 90 bp | ACTAGGCACTGGCAAAGGCCTGAGAGGAGTTTGGCTAAGACTCTTGACAAAGAGAGAGGACCCTGGAGCTaGAGACCTTCCTCTACCCAG | + |
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Preference number: 2 (lower is better) Translates to: TRHWQRPERSLAKTLDKERGPWS*RPSSTQ Trigger: CTGGGTAGAGGAAGGTCTCCAGCTCCAGGGTCCTCT...CTCTTTGTCAAGAGTCTTAGCCAAACTCCTCTCAGGCCTTTGCCAGTGCCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACAATCCTCCTGTTAGGTaGGCTCTCCCCCAAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: DPRESLCPPTFSGGAPPNNPPVR*ALPQRA Trigger: TGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATT...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCGCCAGATGGAAGCTGTaGAGAACAGGGGCAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAARWKL*RTGAEK Trigger: CTTCTCTGCCCCTGTTCTTCACAGCTTCCATCTGGC...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR CAA 90 bp | GGTCGGAGCATAGGAACTAGGCACTGGCAAAGGCCTGAGAGGAGTTaGGCTAAGACTCTTGACAAAGAGAGAAGAACTGAGGAGACATGC | + |
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Preference number: 2 (lower is better) Translates to: GRSIGTRHWQRPERS*AKTLDKERRTEETC Trigger: GCATGTCTCCTCAGTTCTTCTCTCTTTGTCAAGAGTCTTAGCCAAACTCCTCTCAGGCCTTTGCCAGTGCCTAGTTCCTATGCTCCGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACAACCCAAAACTCAACTaGAAAAGAAACTCTCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GHLQTKILLLGGLSPKEHNPKLN*KRNSRR Trigger: TCTCCGAGAGTTTCTTTTTCAGTTGAGTTTTGGGTT...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAGGCCTGAGAGGAGTTTaGCTAAGACTCTTGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: FDPRESLCPPTFSGGAPPGLRGV*LRLLTK Trigger: CTTTGTCAAGAGTCTTAGCCAAACTCCTCTCAGGCC...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAACTATTCTTTACTCCTaGCGCATAGGGGTTAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LAGAGDLSDCLTERHPQKTILYS*RIGVKY Trigger: GTACTTAACCCCTATGCGCCAGGAGTAAAGAATAGT...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAGAGCACGTTTAAGATaGCAGCTGCAAGCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: FDPRESLCPPTFSGGAPPRARLR*QLQALC Trigger: ACAGAGAGCTTGCAGCTGCCATCTTAAACGTGCTCT...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCACAAAGAGAGAAGAACTaGGGAGACATGCAAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FDPRESLCPPTFSGGAPPQREKN*GDMQGD Trigger: ATCTCCTTGCATGTCTCCTCAGTTCTTCTCTCTTTG...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCCAGAGAAGAAAAAGTTaGGGAGGTCGGAGCATAGGA | + |
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Preference number: 2 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAQRRKS*GGRSIG Trigger: TCCTATGCTCCGACCTCCTCAACTTTTTCTTCTCTG...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAATGAGAAAATGATGTaGGGCCAGATGGAAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: FDPRESLCPPTFSGGAPPNEKMM*GQMEAV Trigger: CACAGCTTCCATCTGGCCTCACATCATTTTCTCATT...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACGAGTTAATGAGAAAATaGTGTGAGGCCAGATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DPRESLCPPTFSGGAPPNELMRK*CEARWK Trigger: CTTCCATCTGGCCTCACATCATTTTCTCATTAACTC...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACACTATTCTTTACTCCTaGCGCATAGGGGTTAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: DPRESLCPPTFSGGAPPNTILYS*RIGVKY Trigger: GTACTTAACCCCTATGCGCCAGGAGTAAAGAATAGT...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | TCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGGCAGAGCACGTTTAAGATaGCAGCTGCAAGCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: STTLCSSQTPWLYPLSWGRARLR*QLQALC Trigger: ACAGAGAGCTTGCAGCTGCCATCTTAAACGTGCTCT...GCCCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| 3UTR CAA 90 bp | CCACTATCATTTGTCTATACAGAGATGCATTTGACTAGAATTTCCTaGGGGGCGGGGAGAATCCCTTTCCCTCTCCAGCTCACTGTACCT | + |
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Preference number: 2 (lower is better) Translates to: PLSFVYTEMHLTRIS*GAGRIPFPLQLTVP Trigger: AGGTACAGTGAGCTGGAGAGGGAAAGGGATTCTCCCCGCCCCCAAGGAAATTCTAGTCAAATGCATCTCTGTATAGACAAATGATAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGGCAATGAGAAAATGATGTaGGGCCAGATGGAAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: STTLCSSQTPWLYPLSWGNEKMM*GQMEAV Trigger: CACAGCTTCCATCTGGCCTCACATCATTTTCTCATT...GCCCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCATAAATTCTTTCTCGTaGCTTCTAGGCACCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAINSFS*LLGTRP Trigger: AGGCCTGGTGCCTAGAAGCCACGAGAAAGAATTTAT...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAAAGCAGAAAGATTAGATaGCAACGAGTTAATGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ENTKLRGNRGDSLEASGKSRKIR*QRVNEK Trigger: TTTCTCATTAACTCGTTGCCATCTAATCTTTCTGCT...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTATACAGAGATGCATTTaGCTAGAATTTCCTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PNRETPTETLKEAEQPKTIQRCI*LEFPWG Trigger: CCCCCAAGGAAATTCTAGTCAAATGCATCTCTGTAT...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCCAGAGAAGAAAAAGTTaGGGAGGTCGGAGCATAGGA | + |
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Preference number: 2 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCQRRKS*GGRSIG Trigger: TCCTATGCTCCGACCTCCTCAACTTTTTCTTCTCTG...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGGAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTATACAGAGATGCATTTaGCTAGAATTTCCTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: NRKIQKSQERHFKGTKRLIQRCI*LEFPWG Trigger: CCCCCAAGGAAATTCTAGTCAAATGCATCTCTGTAT...AAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTCCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| 3UTR-3UTR TCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCGAGTTAATGAGAAAATaGTGTGAGGCCAGATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCELMRK*CEARWK Trigger: CTTCCATCTGGCCTCACATCATTTTCTCATTAACTC...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGGAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTAGCAGAAAGATTAGATaGCAACGAGTTAATGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NRKIQKSQERHFKGTKRLSRKIR*QRVNEK Trigger: TTTCTCATTAACTCGTTGCCATCTAATCTTTCTGCT...AAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTCCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| 3UTR-3UTR CAA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGGGGATCAGATCCCCATaGGACTTCCCCCTTCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: RQGDNLVRSQGMRRGSGEGIRSP*DFPLLG Trigger: GCCAAGAAGGGGGAAGTCCAATGGGGATCTGATCCC...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAAGCAGAGAAGAAAAAGTaGAGGAGGTCGGAGCATAGG | + |
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Preference number: 3 (lower is better) Translates to: TKLRGNRGDSLEASGKRQAEKKK*RRSEHR Trigger: CCTATGCTCCGACCTCCTCAACTTTTTCTTCTCTGC...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAATTGACTAGAATTTCCTaGGGGGCGGGGAGAATCCCT | + |
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Preference number: 3 (lower is better) Translates to: LAGAGDLSDCLTERHPQKLTRIS*GAGRIP Trigger: AGGGATTCTCCCCGCCCCCAAGGAAATTCTAGTCAA...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCGGGATCAGATCCCCATaGGACTTCCCCCTTCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAGIRSP*DFPLLG Trigger: GCCAAGAAGGGGGAAGTCCAATGGGGATCTGATCCC...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR CCA 72 bp | GTTAGGTGGGCTCTCCCCCAAAGAGCACGTTTAAGATaGCAGCTGCAAGCTCTCTGTAACCATGACGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VRWALPQRARLR*QLQALCNHDDK Trigger: CTTGTCGTCATGGTTACAGAGAGCTTGCAGCTGCCATCTTAAACGTGCTCTTTGGGGGAGAGCCCACCTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR CCA 72 bp | ATCCCGTCAACGACGTTATGCTCTTCCCAGACTCCATaGCTTTACCCTTTATCTTGGGGCCTAGAAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IPSTTLCSSQTP*LYPLSWGLEGA Trigger: TGCTCCTTCTAGGCCCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAGTTTGGCTAAGACTCTaGACAAAGAGAGAAGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LAGAGDLSDCLTERHPQKVWLRL*TKREEL Trigger: CAGTTCTTCTCTCTTTGTCAAGAGTCTTAGCCAAAC...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAAAACGGCAAATAGGATaGGGAAGCAGAAAGATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAGAGDLSDCLTERHPQKKRQIG*GSRKIR Trigger: TCTAATCTTTCTGCTTCCCAATCCTATTTGCCGTTT...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAAACGGCAAATAGGATaGGGAAGCAGAAAGATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FDPRESLCPPTFSGGAPPKRQIG*GSRKIR Trigger: TCTAATCTTTCTGCTTCCCAATCCTATTTGCCGTTT...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGGAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTTTGACTAGAATTTCCTaGGGGGCGGGGAGAATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: NRKIQKSQERHFKGTKRLLTRIS*GAGRIP Trigger: AGGGATTCTCCCCGCCCCCAAGGAAATTCTAGTCAA...AAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTCCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| 3UTR-3UTR CAA 90 bp | CGTCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGTATACAGAGATGCATTaGACTAGAATTTCCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQRRYALPRLHGFTLYLGYTEMH*TRISLG Trigger: CCCCAAGGAAATTCTAGTCAAATGCATCTCTGTATA...CCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| 3UTR TCA 72 bp | GGTCTCCACTATCATTTGTCTATACAGAGATGCATTTaGCTAGAATTTCCTTGGGGGCGGGGAGAATCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GLHYHLSIQRCI*LEFPWGRGESL Trigger: AAGGGATTCTCCCCGCCCCCAAGGAAATTCTAGTCAAATGCATCTCTGTATAGACAAATGATAGTGGAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTTATACAGAGATGCATTaGACTAGAATTTCCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PNRETPTETLKEAEQPKTYTEMH*TRISLG Trigger: CCCCAAGGAAATTCTAGTCAAATGCATCTCTGTATA...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGGAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTGTTTGGCTAAGACTCTaGACAAAGAGAGAAGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: NRKIQKSQERHFKGTKRLVWLRL*TKREEL Trigger: CAGTTCTTCTCTCTTTGTCAAGAGTCTTAGCCAAAC...AAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTCCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| 3UTR CCA 72 bp | ATTATTATTATTATTACTATTACTATTCTTTACTCCTaGCGCATAGGGGTTAAGTACTCAAGGCTGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IIIIITITILYS*RIGVKYSRLGA Trigger: TGCCCCCAGCCTTGAGTACTTAACCCCTATGCGCCAGGAGTAAAGAATAGTAATAGTAATAATAATAATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACTGCTGGGGCCCTGGTTaGAAGAGGTGGGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHCWGPG*KRWGAG Trigger: CCCAGCGCCCCACCTCTTGCAACCAGGGCCCCAGCA...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAAAACGCCCTGCCCCACTaGCCGCATATCCACCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKLRGNRGDSLEASGKRQNALPH*PHIHRC Trigger: GCAGCGGTGGATATGCGGGCAGTGGGGCAGGGCGTT...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACTCTCCCGGGTGTGAGTaGGCACGTGGCGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHSPGCE*ARGAPA Trigger: AGCTGGAGCGCCACGTGCGCACTCACACCCGGGAGA...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACTCCTTAGGGCCACTTaGGGGCGGTCCCGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENTKLRGNRGDSLEASGKLLRAT*GRSRAW Trigger: CCAGGCCCGGGACCGCCCCCAAGTGGCCCTAAGGAG...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACCCATCACCCTGGCCCTaGCCACCACCTAGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHPSPWP*PPPSQL Trigger: CAACTGGCTAGGTGGTGGTCAGGGCCAGGGTGATGG...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACCACCACCTAGCCAGTTaGCCCCAGGGTGCATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHHHLAS*PQGACP Trigger: GGGACATGCACCCTGGGGGCAACTGGCTAGGTGGTG...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAATGCTGGGGCCCTGGTTaGAAGAGGTGGGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENTKLRGNRGDSLEASGKCWGPG*KRWGAG Trigger: CCCAGCGCCCCACCTCTTGCAACCAGGGCCCCAGCA...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAATGCATAGCCAGAGGCTaGGGCCGGAGGACTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGAGDLSDCLTERHPQKCIARG*GRRTAC Trigger: GCAGGCAGTCCTCCGGCCCCAGCCTCTGGCTATGCA...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAAGGGGTGCAGGCGAAGTaGAAGATCGGGGCGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKLRGNRGDSLEASGKRQGVQAK*KIGAAD Trigger: ATCAGCCGCCCCGATCTTCCACTTCGCCTGCACCCC...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAAGGCCGGAGGACTGCCTaGAGGAGAGAGGAGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TKLRGNRGDSLEASGKRQGRRTA*RREESI Trigger: AATGGACTCCTCTCTCCTGCAGGCAGTCCTCCGGCC...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACCTGGACCTGGTGAGATaGCTGCGTGGATGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHLDLVR*LRGCLP Trigger: AGGCAGGCATCCACGCAGGCATCTCACCAGGTCCAG...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACCCACTCCCCTCCAGTTaGCCACTATTGCCAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHPLPSS*PLLPTA Trigger: GGCGGTTGGCAATAGTGGGCAACTGGAGGGGAGTGG...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACTCTCCCGGGTGTGAGTaGGCACGTGGCGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPRESLCPPTFSGGAPPNSPGCE*ARGAPA Trigger: AGCTGGAGCGCCACGTGCGCACTCACACCCGGGAGA...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACTCTAGCAGGTTGCTCTaGTCTGGGCTGCCTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHSSRLL*SGLPPW Trigger: CCACGGAGGCAGCCCAGAGCAGAGCAACCTGCTAGA...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACGACATGCTGGGGCCCTaGTTGCAAGAGGTGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DPRESLCPPTFSGGAPPNDMLGP*LQEVGR Trigger: GCGCCCCACCTCTTGCAACCAGGGCCCCAGCATGTC...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACTCTGGGCTGCCTCCGTaGGCTTTTTCTGGGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHSGLPP*AFSGGA Trigger: TGCACCCCCAGAAAAAGCCCACGGAGGCAGCCCAGA...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAATTTCCCCAGGGTTGTTaGGTCCCGCAGAGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKLRGNRGDSLEASGKRQFPQGC*VPQRAR Trigger: TCTAGCCCTCTGCGGGACTCAACAACCCTGGGGAAA...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAGGTGGGCCCAGGAAATaGGTGAGGGAAGGGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAGAGDLSDCLTERHPQKGGPRK*VREGWV Trigger: TACCCACCCTTCCCTCACTCATTTCCTGGGCCCACC...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACCATCACCCTGGCCCTaGCCACCACCTAGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ENTKLRGNRGDSLEASGKPSPWP*PPPSQL Trigger: CAACTGGCTAGGTGGTGGTCAGGGCCAGGGTGATGG...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGTCCCCGTGGGTGCGCTaGTGTTTGCTCAAGTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RQGDNLVRSQGMRRGSGESPWVR*CLLKWS Trigger: CGACCACTTGAGCAAACATCAGCGCACCCACGGGGA...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACAGATGCCTGCGTGGATaGCTGCCTTGTACCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHRCLRG*LPCTTS Trigger: GCTCGTGGTACAAGGCAGGCATCCACGCAGGCATCT...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAAAGATGCCTGCGTGGATaGCTGCCTTGTACCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKLRGNRGDSLEASGKRQRCLRG*LPCTTS Trigger: GCTCGTGGTACAAGGCAGGCATCCACGCAGGCATCT...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAATCTAGCAGGTTGCTCTaGTCTGGGCTGCCTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGAGDLSDCLTERHPQKSSRLL*SGLPPW Trigger: CCACGGAGGCAGCCCAGAGCAGAGCAACCTGCTAGA...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGTTTCCCCAGGGTTGTTaGGTCCCGCAGAGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGDNLVRSQGMRRGSGEFPQGC*VPQRAR Trigger: TCTAGCCCTCTGCGGGACTCAACAACCCTGGGGAAA...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAGGGATGTGGCAGCTGTaGATGGGCTTCTTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGAGDLSDCLTERHPQKGMWQL*MGFFLS Trigger: GCTGAGGAAGAAGCCCATTCACAGCTGCCACATCCC...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGCAGTCAGACGAGCTGTaGCCCTTAGGCACTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGDNLVRSQGMRRGSGEQSDEL*PLGTRS Trigger: GCTCCTAGTGCCTAAGGGGCACAGCTCGTCTGACTG...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCACACCACCTAGCCAGTTaGCCCCAGGGTGCATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FDPRESLCPPTFSGGAPPHHLAS*PQGACP Trigger: GGGACATGCACCCTGGGGGCAACTGGCTAGGTGGTG...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CGTCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGTGCATAGCCAGAGGCTaGGGCCGGAGGACTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RQRRYALPRLHGFTLYLGCIARG*GRRTAC Trigger: GCAGGCAGTCCTCCGGCCCCAGCCTCTGGCTATGCA...CCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR TCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAAGGGATGTGGCAGCTGTaGATGGGCTTCTTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENTKLRGNRGDSLEASGKGMWQL*MGFFLS Trigger: GCTGAGGAAGAAGCCCATTCACAGCTGCCACATCCC...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAACGTATGGCTTCTTTGTaGCTCCTTTCCCCAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKLRGNRGDSLEASGKRQRMASL*LLSPGL Trigger: CAACCCTGGGGAAAGGAGGCACAAAGAAGCCATACG...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCCCGAGGGGGTTTGGCTaGACCACTCCCCTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAPRGFG*TTPLQL Trigger: CAACTGGAGGGGAGTGGTGCAGCCAAACCCCCTCGG...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTCCAAACCAAAATCCTCCTGTTAGGTGGGCTCTCCCCCAAAGAGCACAAGTGGGCTTTCAGATaGGAAGCCTTGCCGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: GHLQTKILLLGGLSPKEHKWAFR*EALPYT Trigger: GGTGTACGGCAAGGCTTCGCATCTGAAAGCCCACTT...GTGCTCTTTGGGGGAGAGCCCACCTAACAGGAGGATTTTGGTTTGGAGGTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAACGCAGAAAAGCCAGTTaGAGACGAAAGGCCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGAGDLSDCLTERHPQKRRKAS*RRKASR Trigger: GCGAGAGGCCTTTCGTCTGCAACTGGCTTTTCTGCG...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACGGTGAGATGCCTGCGTaGATGCCTGCCTTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DPRESLCPPTFSGGAPPNGEMPA*MPALYH Trigger: GTGGTACAAGGCAGGCATCCACGCAGGCATCTCACC...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | TCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGGCGGGGTGCAGGCGAAGTaGAAGATCGGGGCGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: STTLCSSQTPWLYPLSWGGVQAK*KIGAAD Trigger: ATCAGCCGCCCCGATCTTCCACTTCGCCTGCACCCC...GCCCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR GCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAAAGCCGCCAAATTTGCTaGAGGCTGCAGTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ENTKLRGNRGDSLEASGKSRQIC*RLQSAW Trigger: CCATGCTGACTGCAGCCTGCAGCAAATTTGGCGGCT...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR GCA 90 bp | CGACAAGGGGATAACCTGGTGAGGTCACAGGGTATGAGAAGAGGATCAGGGGAGCGTATGGCTTCTTTGTaGCTCCTTTCCCCAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQGDNLVRSQGMRRGSGERMASL*LLSPGL Trigger: CAACCCTGGGGAAAGGAGGCACAAAGAAGCCATACG...CTCCCCTGATCCTCTTCTCATACCCTGTGACCTCACCAGGTTATCCCCTTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CGTCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGCCACTCCCCTCCAGTTaGCCACTATTGCCAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQRRYALPRLHGFTLYLGPLPSS*PLLPTA Trigger: GGCGGTTGGCAATAGTGGGCAACTGGAGGGGAGTGG...CCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR GCA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTAACGCCCTGCCCCACTaGCCGCATATCCACCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRETPTETLKEAEQPKTNALPH*PHIHRC Trigger: GCAGCGGTGGATATGCGGGCAGTGGGGCAGGGCGTT...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACGGGTGCGCTGATGTTTaGTCAAGTGGTCGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPRESLCPPTFSGGAPPNGCADV*SSGRFW Trigger: CCAGAAGCGACCACTTGAGCAAACATCAGCGCACCC...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAAGGCTTTTTCTGGGGGTaGAGGCGAAGTGGAAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: ENTKLRGNRGDSLEASGKGFFWG*RRSGRS Trigger: CGATCTTCCACTTCGCCTGCACCCCCAGAAAAAGCC...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACGCATGGCCAGGGGACTaGAGCCATAGTGAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPRESLCPPTFSGGAPPNAWPGD*SHSELL Trigger: AAGAAGCTCACTATGGCTCCAGTCCCCTGGCCATGC...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR CCA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCACGCTGGGTAGGGAGCTaGGTTAAGGGGAGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FDPRESLCPPTFSGGAPPRWVGS*VKGSKV Trigger: GACTTTGCTCCCCTTAACCCAGCTCCCTACCCAGCG...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CGTCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGCAAGAGGTGGGGCGCTaGGTAGGGAGCTGGGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRRYALPRLHGFTLYLGQEVGR*VGSWVK Trigger: CTTAACCCAGCTCCCTACCCAGCGCCCCACCTCTTG...CCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR CCA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTGACATGCTGGGGCCCTaGTTGCAAGAGGTGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRETPTETLKEAEQPKTDMLGP*LQEVGR Trigger: GCGCCCCACCTCTTGCAACCAGGGCCCCAGCATGTC...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCTGGGGTAGGACATGCTaGGGCCCTGGTTGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAWGRTC*GPGCKR Trigger: CCTCTTGCAACCAGGGCCCCAGCATGTCCTACCCCA...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | ACTAGGCACTGGCAAAGGCCTGAGAGGAGTTTGGCTAAGACTCTTGACAAAGAGTGGGGTAGGACATGCTaGGGCCCTGGTTGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRHWQRPERSLAKTLDKEWGRTC*GPGCKR Trigger: CCTCTTGCAACCAGGGCCCCAGCATGTCCTACCCCA...CTCTTTGTCAAGAGTCTTAGCCAAACTCCTCTCAGGCCTTTGCCAGTGCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAATGTGGCAGCTGTGAATaGGCTTCTTCCTCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENTKLRGNRGDSLEASGKCGSCE*ASSSAQ Trigger: CTGGGCTGAGGAAGAAGCCCATTCACAGCTGCCACA...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACCATGGTTTTGGGGGCTaGAAGGTCAGCGTATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPRESLCPPTFSGGAPPNHGFGG*KVSVWL Trigger: AAGCCATACGCTGACCTTTCAGCCCCCAAAACCATG...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTCCGAGGGGGTTTGGCTaGACCACTCCCCTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNRETPTETLKEAEQPKTPRGFG*TTPLQL Trigger: CAACTGGAGGGGAGTGGTGCAGCCAAACCCCCTCGG...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACGAGAGAGGAGTCCATTaGTGCTTGAGAAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPRESLCPPTFSGGAPPNERGVH*CLRREL Trigger: CAGCTCCCTTCTCAAGCACCAATGGACTCCTCTCTC...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CGTCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGGGTGAGATGCCTGCGTaGATGCCTGCCTTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQRRYALPRLHGFTLYLGGEMPA*MPALYH Trigger: GTGGTACAAGGCAGGCATCCACGCAGGCATCTCACC...CCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR CCA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAGGGAGCAAAGTCAGATaGGTAAGTAGGCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FDPRESLCPPTFSGGAPPGSKVR*VSRQLG Trigger: CCCCAGCTGCCTACTTACCCATCTGACTTTGCTCCC...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCCGCAGAAAAGCCAGTTaGAGACGAAAGGCCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSGFKSHWNGVKPPRLGARRKAS*RRKASR Trigger: GCGAGAGGCCTTTCGTCTGCAACTGGCTTTTCTGCG...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | ACTAGGCACTGGCAAAGGCCTGAGAGGAGTTTGGCTAAGACTCTTGACAAAGAGGGCTTTTTCTGGGGGTaGAGGCGAAGTGGAAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: TRHWQRPERSLAKTLDKEGFFWG*RRSGRS Trigger: CGATCTTCCACTTCGCCTGCACCCCCAGAAAAAGCC...CTCTTTGTCAAGAGTCTTAGCCAAACTCCTCTCAGGCCTTTGCCAGTGCCTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CCA 90 bp | ACTAGGCACTGGCAAAGGCCTGAGAGGAGTTTGGCTAAGACTCTTGACAAAGAGGGGAGCAAAGTCAGATaGGTAAGTAGGCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRHWQRPERSLAKTLDKEGSKVR*VSRQLG Trigger: CCCCAGCTGCCTACTTACCCATCTGACTTTGCTCCC...CTCTTTGTCAAGAGTCTTAGCCAAACTCCTCTCAGGCCTTTGCCAGTGCCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CCA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTCAAGAGGTGGGGCGCTaGGTAGGGAGCTGGGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNRETPTETLKEAEQPKTQEVGR*VGSWVK Trigger: CTTAACCCAGCTCCCTACCCAGCGCCCCACCTCTTG...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCTGTGGCAGCTGTGAATaGGCTTCTTCCTCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSGFKSHWNGVKPPRLGACGSCE*ASSSAQ Trigger: CTGGGCTGAGGAAGAAGCCCATTCACAGCTGCCACA...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR GCA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTCAGTCAGACGAGCTGTaGCCCTTAGGCACTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRETPTETLKEAEQPKTQSDEL*PLGTRS Trigger: GCTCCTAGTGCCTAAGGGGCACAGCTCGTCTGACTG...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCCCAGTTGCCCACTATTaGCAACCGCCTTGGGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAPVAHY*QPPWAY Trigger: ATAAGCCCAAGGCGGTTGGCAATAGTGGGCAACTGG...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR GCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCCTTCTTCCCCGACGCTaGGACCCTCCCCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCLLPRR*DPPPAP Trigger: AGGAGCTGGGGGAGGGTCGCAGCGTCGGGGAAGAAG...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | GAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTTAAAACTGGGGCCGGAGGACTaGCTGCAGGAGAGAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDPKISGKAFQRHKAALKLGPED*LQERGV Trigger: GACTCCTCTCTCCTGCAGGCAGTCCTCCGGCCCCAG...TTTTAAAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| CDS-3UTR CCA 90 bp | CCAGGGGGCAATAAATTATCATCATCATCATCATCATCATCGTGTTTGTTTAAACTCCTTAGGGCCACTTaGGGGCGGTCCCGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGNKLSSSSSSSSCLFKLLRAT*GRSRAW Trigger: CCAGGCCCGGGACCGCCCCCAAGTGGCCCTAAGGAG...TTTAAACAAACACGATGATGATGATGATGATGATGATAATTTATTGCCCCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCTCCCCGTGGGTGCGCTaGTGTTTGCTCAAGTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCSPWVR*CLLKWS Trigger: CGACCACTTGAGCAAACATCAGCGCACCCACGGGGA...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCCTGGACCTGGTGAGATaGCTGCGTGGATGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCLDLVR*LRGCLP Trigger: AGGCAGGCATCCACGCAGGCATCTCACCAGGTCCAG...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | ACTAGGCACTGGCAAAGGCCTGAGAGGAGTTTGGCTAAGACTCTTGACAAAGAGTATTGCCAACCGCCTTaGGCTTATAGACATCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRHWQRPERSLAKTLDKEYCQPP*AYRHLG Trigger: CCCAAGATGTCTATAAGCCCAAGGCGGTTGGCAATA...CTCTTTGTCAAGAGTCTTAGCCAAACTCCTCTCAGGCCTTTGCCAGTGCCTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| 3UTR CAA 72 bp | TTTGTCTATACAGAGATGCATTTGACTAGAATTTCCTaGGGGGCGGGGAGAATCCCTTTCCCTCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVYTEMHLTRIS*GAGRIPFPLQL Trigger: GAGCTGGAGAGGGAAAGGGATTCTCCCCGCCCCCAAGGAAATTCTAGTCAAATGCATCTCTGTATAGACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGGGGCAATAAATTATCATCATCATCATCATCATCATCGTGTTTGTTTAAACTTCTTCCCCGACGCTaGGACCCTCCCCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGNKLSSSSSSSSCLFKLLPRR*DPPPAP Trigger: AGGAGCTGGGGGAGGGTCGCAGCGTCGGGGAAGAAG...TTTAAACAAACACGATGATGATGATGATGATGATGATAATTTATTGCCCCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCCGCTGGGTAGGGAGCTaGGTTAAGGGGAGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCRWVGS*VKGSKV Trigger: GACTTTGCTCCCCTTAACCCAGCTCCCTACCCAGCG...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCGGGTGCGCTGATGTTTaGTCAAGTGGTCGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCGCADV*SSGRFW Trigger: CCAGAAGCGACCACTTGAGCAAACATCAGCGCACCC...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTTATTGCCAACCGCCTTaGGCTTATAGACATCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PNRETPTETLKEAEQPKTYCQPP*AYRHLG Trigger: CCCAAGATGTCTATAAGCCCAAGGCGGTTGGCAATA...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCCCAGTTGCCCACTATTaGCAACCGCCTTGGGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCPVAHY*QPPWAY Trigger: ATAAGCCCAAGGCGGTTGGCAATAGTGGGCAACTGG...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR GCA 90 bp | AGGATAGAAATCTACGAGCAAGGTCTCCACTATCATTTGTCTATACAGAGATGCAAGTGGGCTTTCAGATaGGAAGCCTTGCCGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: RIEIYEQGLHYHLSIQRCKWAFR*EALPYT Trigger: GGTGTACGGCAAGGCTTCGCATCTGAAAGCCCACTT...GCATCTCTGTATAGACAAATGATAGTGGAGACCTTGCTCGTAGATTTCTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGGGGCAATAAATTATCATCATCATCATCATCATCATCGTGTTTGTTTAAATCTGGGCTGCCTCCGTaGGCTTTTTCTGGGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGGNKLSSSSSSSSCLFKSGLPP*AFSGGA Trigger: TGCACCCCCAGAAAAAGCCCACGGAGGCAGCCCAGA...TTTAAACAAACACGATGATGATGATGATGATGATGATAATTTATTGCCCCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR TCA 90 bp | GAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTTAAAACATGGTTTTGGGGGCTaGAAGGTCAGCGTATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EDPKISGKAFQRHKAALKHGFGG*KVSVWL Trigger: AAGCCATACGCTGACCTTTCAGCCCCCAAAACCATG...TTTTAAAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS-3UTR CCA 90 bp | GAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTTAAAAGAGAGAGGAGTCCATTaGTGCTTGAGAAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDPKISGKAFQRHKAALKERGVH*CLRREL Trigger: CAGCTCCCTTCTCAAGCACCAATGGACTCCTCTCTC...TTTTAAAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS TCA 90 bp | GCAGGGCCTGTGGACAGTGTCCCTTGCAGCCCATCACCCTGGCCCTaGCCACCACCTAGCCAGTTGCCCCCAGGGTGCATGTCCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGPVDSVPCSPSPWP*PPPSQLPPGCMSHQ Trigger: TTGGTGGGACATGCACCCTGGGGGCAACTGGCTAGGTGGTGGTCAGGGCCAGGGTGATGGGCTGCAAGGGACACTGTCCACAGGCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS TCA 90 bp | AGGGTGCATGTCCCACCAAGGAGTAGGTGTGTTGCCTGGACCTGGTaGGATGCCTGCGTGGATGCCTGCCTTGTACCACGAGCCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVHVPPRSRCVAWTW*DACVDACLVPRAIG Trigger: CCCTATGGCTCGTGGTACAAGGCAGGCATCCACGCAGGCATCTCACCAGGTCCAGGCAACACACCTACTCCTTGGTGGGACATGCACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACGGCAACTCCTTTCCCCAGGGTaGTTGAGTCCCGCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TKLRGNRGDSLEASGKRQLLSPG*LSPAEG Trigger: GCCCTCTGCGGGACTCAACAACCCTGGGGAAAGGAG...TTGCCGTTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAGCGTCCCCCATGGTTTaGGGGGCTGAAAGGTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LAGAGDLSDCLTERHPQKASPMV*GAERSA Trigger: CGCTGACCTTTCAGCCCCCAAAACCATGGGGGACGC...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACCACCACCTAGCCAGTaGCCCCCAGGGTGCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ENTKLRGNRGDSLEASGKPPPSQ*PPGCMS Trigger: GGACATGCACCCTGGGGGCAACTGGCTAGGTGGTGG...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS TCA 90 bp | AAGGTCAGCGTATGGCTTCTTTGTGCCTCCTTTCCCCAGGGTTGTTaGGTCCCGCAGAGGGCTAGAGCCGCCAAATTTGCTGCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KVSVWLLCASFPQGC*VPQRARAAKFAAGC Trigger: GCAGCCTGCAGCAAATTTGGCGGCTCTAGCCCTCTGCGGGACTCAACAACCCTGGGGAAAGGAGGCACAAAGAAGCCATACGCTGACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAGCGTCCCCCATGGTTTaGGGGGCTGAAAGGTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FDPRESLCPPTFSGGAPPASPMV*GAERSA Trigger: CGCTGACCTTTCAGCCCCCAAAACCATGGGGGACGC...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAGGAGTCCATTGGTGCTaGAGAAGGGAGCTGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAGAGDLSDCLTERHPQKGVHWC*RRELGR Trigger: CCTACCCAGCTCCCTTCTCAAGCACCAATGGACTCC...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCATGTGGACAGTGTCCCTaGCAGCCCATCACCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FDPRESLCPPTFSGGAPPCGQCP*QPITLA Trigger: GGCCAGGGTGATGGGCTGCAAGGGACACTGTCCACA...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACCTAGAGCCGCCAAATTaGCTGCAGGCTGCAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPRESLCPPTFSGGAPPNLEPPN*LQAAVS Trigger: GCTGACTGCAGCCTGCAGCAAATTTGGCGGCTCTAG...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCCTCCTTTCCCCAGGGTaGTTGAGTCCCGCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSGFKSHWNGVKPPRLGALLSPG*LSPAEG Trigger: GCCCTCTGCGGGACTCAACAACCCTGGGGAAAGGAG...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAAGGAGAGAGGAGTCCATaGGTGCTTGAGAAGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAGAGDLSDCLTERHPQKGERSP*VLEKGA Trigger: AGCTCCCTTCTCAAGCACCAATGGACTCCTCTCTCC...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCTGTGGACAGTGTCCCTaGCAGCCCATCACCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSGFKSHWNGVKPPRLGACGQCP*QPITLA Trigger: GGCCAGGGTGATGGGCTGCAAGGGACACTGTCCACA...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAAACCCGCAGAAAAGCCAGTaGCAGACGAAAGGCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DPRESLCPPTFSGGAPPNPQKSQ*QTKGLS Trigger: CGAGAGGCCTTTCGTCTGCAACTGGCTTTTCTGCGG...GTTTGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTGGGGCTGGGGATCTTAGTGACTGCCTAACAGAGAGACACCCACAGAAACTTCTGGTAAAGCGCTaGGAACAGAGCAGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGAGDLSDCLTERHPQKLLVKR*EQSRQV Trigger: CACCTGCCTGCTCTGTTCCAAGCGCTTTACCAGAAG...TTTCTGTGGGTGTCTCTCTGTTAGGCAGTCACTAAGATCCCCAGCCCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | TTTGATCCCAGAGAAAGCCTTTGCCCACCTACTTTTTCAGGAGGGGCACCTCCAGGAGTCCATTGGTGCTaGAGAAGGGAGCTGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FDPRESLCPPTFSGGAPPGVHWC*RRELGR Trigger: CCTACCCAGCTCCCTTCTCAAGCACCAATGGACTCC...TGGAGGTGCCCCTCCTGAAAAAGTAGGTGGGCAAAGGCTTTCTCTGGGATCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTCCACCACCTAGCCAGTaGCCCCCAGGGTGCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNRETPTETLKEAEQPKTPPPSQ*PPGCMS Trigger: GGACATGCACCCTGGGGGCAACTGGCTAGGTGGTGG...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | GAAAACACAAAGCTCAGGGGGAATCGAGGCGACAGCCTGGAAGCTTCGGGAAAACTTCTGGTAAAGCGCTaGGAACAGAGCAGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ENTKLRGNRGDSLEASGKLLVKR*EQSRQV Trigger: CACCTGCCTGCTCTGTTCCAAGCGCTTTACCAGAAG...TTTTCCCGAAGCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCCTAGAGCCGCCAAATTaGCTGCAGGCTGCAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSGFKSHWNGVKPPRLGALEPPN*LQAAVS Trigger: GCTGACTGCAGCCTGCAGCAAATTTGGCGGCTCTAG...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS-3UTR CAA 90 bp | TCAACGACGTTATGCTCTTCCCAGACTCCATGGCTTTACCCTTTATCTTGGGGCCAGCGTATGGCTTCTTaGTGCCTCCTTTCCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: STTLCSSQTPWLYPLSWGQRMAS*CLLSPG Trigger: CCCTGGGGAAAGGAGGCACAAAGAAGCCATACGCTG...GCCCCAAGATAAAGGGTAAAGCCATGGAGTCTGGGAAGAGCATAACGTCGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| CDS-3UTR CAA 90 bp | CAAAGCGGCTTTAAAAGTCACTGGAATGGAGTGAAACCTCCTAGATTGGGGGCCGGAGAGAGGAGTCCATaGGTGCTTGAGAAGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSGFKSHWNGVKPPRLGAGERSP*VLEKGA Trigger: AGCTCCCTTCTCAAGCACCAATGGACTCCTCTCTCC...GGCCCCCAATCTAGGAGGTTTCACTCCATTCCAGTGACTTTTAAAGCCGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTACCACTCCCCTCCAGTaGCCCACTATTGCCAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PNRETPTETLKEAEQPKTTTPLQ*PTIANR Trigger: GCGGTTGGCAATAGTGGGCAACTGGAGGGGAGTGGT...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | CCTAACAGAGAGACACCCACAGAAACTCTAAAAGAGGCCGAACAACCCAAAACTCCGCAGAAAAGCCAGTaGCAGACGAAAGGCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PNRETPTETLKEAEQPKTPQKSQ*QTKGLS Trigger: CGAGAGGCCTTTCGTCTGCAACTGGCTTTTCTGCGG...AGTTTTGGGTTGTTCGGCCTCTTTTAGAGTTTCTGTGGGTGTCTCTCTGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS-3UTR CAA 90 bp | GAAGATCCAAAAATCTCAGGAAAGGCATTTCAAAGGCACAAAGCGGCTTTAAAACAGATCTCTAGCAGGTaGCTCTGCTCTGGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EDPKISGKAFQRHKAALKQISSR*LCSGLP Trigger: AGGCAGCCCAGAGCAGAGCAACCTGCTAGAGATCTG...TTTTAAAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGATTTTTGGATCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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| CDS-3UTR CAA 90 bp | CCAGGGGGCAATAAATTATCATCATCATCATCATCATCATCGTGTTTGTTTAAACAGATCTCTAGCAGGTaGCTCTGCTCTGGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGGNKLSSSSSSSSCLFKQISSR*LCSGLP Trigger: AGGCAGCCCAGAGCAGAGCAACCTGCTAGAGATCTG...TTTAAACAAACACGATGATGATGATGATGATGATGATAATTTATTGCCCCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS TCA 72 bp | GGGGGCGGTCCCGGGCCTGGCTCCCCGTGGGTGCGCTaGTGTTTGCTCAAGTGGTCGCTTCTGGTAAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGPGPGSPWVR*CLLKWSLLVKR Trigger: GCGCTTTACCAGAAGCGACCACTTGAGCAAACATCAGCGCACCCACGGGGAGCCAGGCCCGGGACCGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS CCA 72 bp | CAGCTCCTTAGGGCCACTTGGGGGCGGTCCCGGGCCTaGCTCCCCGTGGGTGCGCTGATGTTTGCTCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLRATWGRSRA*LPVGALMFAQV Trigger: CACTTGAGCAAACATCAGCGCACCCACGGGGAGCCAGGCCCGGGACCGCCCCCAAGTGGCCCTAAGGAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS TCA 72 bp | GTGGACAGTGTCCCTTGCAGCCCATCACCCTGGCCCTaGCCACCACCTAGCCAGTTGCCCCCAGGGTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: VDSVPCSPSPWP*PPPSQLPPGCM Trigger: CATGCACCCTGGGGGCAACTGGCTAGGTGGTGGTCAGGGCCAGGGTGATGGGCTGCAAGGGACACTGTCCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS GCA 72 bp | CCGGAGGACTGCCTGCAGGAGAGAGGAGTCCATTGGTaGTTGAGAAGGGAGCTGGGTAGGCGTCCCCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PEDCLQERGVHW*LRRELGRRPPW Trigger: CCATGGGGGACGCCTACCCAGCTCCCTTCTCAAGCACCAATGGACTCCTCTCTCCTGCAGGCAGTCCTCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
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| CDS CAA 90 bp | CACCGGTGGGCCCAGGAAATGAGTGAGGGAAGGGTGGGTAGTCATTaGCATAGCCAGAGGCTGGGGCCGGAGGACTGCCTGCAGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HRWAQEMSEGRVGSH*HSQRLGPEDCLQER Trigger: TCTCTCCTGCAGGCAGTCCTCCGGCCCCAGCCTCTGGCTATGCAAATGACTACCCACCCTTCCCTCACTCATTTCCTGGGCCCACCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS CAA 72 bp | CCCCCAGGGTGCATGTCCCACCAAGGAGTAGGTGTGTaGCCTGGACCTGGTGAGATGCCTGCGTGGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPGCMSHQGVGV*PGPGEMPAWMP Trigger: AGGCATCCACGCAGGCATCTCACCAGGTCCAGGCAACACACCTACTCCTTGGTGGGACATGCACCCTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS CAA 90 bp | AGCCAGTTGCCCCCAGGGTGCATGTCCCACCAAGGAGTAGGTGTGTaGCCTGGACCTGGTGAGATGCCTGCGTGGATGCCTGCCTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SQLPPGCMSHQGVGV*PGPGEMPAWMPALY Trigger: GTACAAGGCAGGCATCCACGCAGGCATCTCACCAGGTCCAGGCAACACACCTACTCCTTGGTGGGACATGCACCCTGGGGGCAACTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS CAA 72 bp | GTTGTTGAGTCCCGCAGAGGGCTAGAGCCGCCAAATTaGCTGCAGGCTGCAGTCAGCATGGCCAGGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: VVESRRGLEPPN*LQAAVSMARGL Trigger: CAGTCCCCTGGCCATGCTGACTGCAGCCTGCAGCAAATTTGGCGGCTCTAGCCCTCTGCGGGACTCAACAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
||
| CDS CAA 72 bp | GCCCAGGAAATGAGTGAGGGAAGGGTGGGTAGTCATTaGCATAGCCAGAGGCTGGGGCCGGAGGACTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AQEMSEGRVGSH*HSQRLGPEDCL Trigger: CAGGCAGTCCTCCGGCCCCAGCCTCTGGCTATGCAAATGACTACCCACCCTTCCCTCACTCATTTCCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS TCA 72 bp | GTCCCACCAAGGAGTAGGTGTGTTGCCTGGACCTGGTaGGATGCCTGCGTGGATGCCTGCCTTGTACCACGA | + |
|
Preference number: 6 (lower is better) Translates to: VPPRSRCVAWTW*DACVDACLVPR Trigger: TCGTGGTACAAGGCAGGCATCCACGCAGGCATCTCACCAGGTCCAGGCAACACACCTACTCCTTGGTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS CAA 72 bp | GAGGACTGCCTGCAGGAGAGAGGAGTCCATTGGTGCTaGAGAAGGGAGCTGGGTAGGCGTCCCCCATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EDCLQERGVHWC*RRELGRRPPWF Trigger: AAACCATGGGGGACGCCTACCCAGCTCCCTTCTCAAGCACCAATGGACTCCTCTCTCCTGCAGGCAGTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS GCA 72 bp | AGTCATTTGCATAGCCAGAGGCTGGGGCCGGAGGACTaGCTGCAGGAGAGAGGAGTCCATTGGTGCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHLHSQRLGPED*LQERGVHWCLR Trigger: TCTCAAGCACCAATGGACTCCTCTCTCCTGCAGGCAGTCCTCCGGCCCCAGCCTCTGGCTATGCAAATGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS CCA 72 bp | TGGGTAGGGAGCTGGGTTAAGGGGAGCAAAGTCAGATaGGTAAGTAGGCAGCTGGGGGTTCAGTGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WVGSWVKGSKVR*VSRQLGVQWRL Trigger: CAGCCTCCACTGAACCCCCAGCTGCCTACTTACCCATCTGACTTTGCTCCCCTTAACCCAGCTCCCTACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078508.7 ENSMUST00000229464.2 |
||
| CDS CCA 72 bp | ATTTGCTGCAGGCTGCAGTCAGCATGGCCAGGGGACTaGAGCCATAGTGAGCTTCTTCCTCAAGCAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ICCRLQSAWPGD*SHSELLPQAER Trigger: CCTCTCTGCTTGAGGAAGAAGCTCACTATGGCTCCAGTCCCCTGGCCATGCTGACTGCAGCCTGCAGCAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078508.7 |
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