Pregenerated sensors for SP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038560Ensembl transcript IDs: ENSMUST00000047997.8, ENSMUST00000107622.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAAGCTAAGAAAGAGAGGGACGGGGAGTCCAGGCAGGGTTTTCTaGTGTAATCCCTCTGCTAGGACAACCTCTCTCCCTTCCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: VKLRKRGTGSPGRVF*CNPSARTTSLPSTP Trigger: GGGGGTGGAAGGGAGAGAGGTTGTCCTAGCAGAGGGATTACAGCAGAAAACCCTGCCTGGACTCCCCGTCCCTCTCTTTCTTAGCTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR GCA 90 bp | CTCTTCCACTTTGTAAGAGGATTTTTCTGCTGGATCCCTCCTCTATaGCATCCAGCTCTGACCTCCAGCTCAGAGCCCTGGCTGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: LFHFVRGFFCWIPPL*HPALTSSSEPWLQS Trigger: GCTCTGCAGCCAGGGCTCTGAGCTGGAGGTCAGAGCTGGATGGCATAGAGGAGGGATCCAGCAGAAAAATCCTCTTACAAAGTGGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR GCA 90 bp | CACCTAGCTAGGCAACCTGCAGGCATGGCCAACTTCGCTCTTGCCTaGAGCCTTCTTTGTAAGAAAGGGAACCTCTGGCTAGGTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: HLARQPAGMANFALA*SLLCKKGNLWLGSQ Trigger: CTGTGAACCTAGCCAGAGGTTCCCTTTCTTACAAAGAAGGCTGCAGGCAAGAGCGAAGTTGGCCATGCCTGCAGGTTGCCTAGCTAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR GCA 90 bp | GATGGGGTCTCAGGAGACCCCAGGCTCAGTAGAGAAACACATACATaGACACATACAGGTGCAGACAACACACGCATACACACACTCACA | + |
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Preference number: 1 (lower is better) Translates to: DGVSGDPRLSRETHT*THTGADNTRIHTLT Trigger: TGTGAGTGTGTGTATGCGTGTGTTGTCTGCACCTGTATGTGTGCATGTATGTGTTTCTCTACTGAGCCTGGGGTCTCCTGAGACCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCATCCCAGTCCTTGGACTaGGCTCCAGCATCCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GGEEGIPHPRCPPLGPSASQSLD*APASPR Trigger: CCTGGGGGATGCTGGAGCCCAGTCCAAGGACTGGGA...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR TCA 90 bp | GACAACCTCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGCCCTGGCTGCAGAGCTaGGCTGCTCTTCCTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DNLSPFHPQQESKGWGPGPWLQS*AALPGS Trigger: AGAGCCAGGAAGAGCAGCTCAGCTCTGCAGCCAGGG...CCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGAGGTTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCGCTCAGAGCCCTGGCTaGAGAGCTGAGCTGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PAPTSHTGPSPWTGLQHPAQSPG*RAELLF Trigger: GAAGAGCAGCTCAGCTCTGCAGCCAGGGCTCTGAGC...GGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGAGTGGGGTATGCCATCCAGCTCTaGCCTCCAGCTCAGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SLPSTPNRKARDGDLGVGYAIQL*PPAQSP Trigger: AGGGCTCTGAGCTGGAGGTCAGAGCTGGATGGCATA...CCCCACTCCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCAGGGAGGAAGATGCTaGGGTTCTTGTCCCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SQPLLPIQVPVLGLGSSIQGGRC*GSCPQV Trigger: GACCTGGGGACAAGAACCTCAGCATCTTCCTCCCTG...GATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCAGGAAAGCAAGGGATaGGGACCTGGGAGTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHQESKG*GPGSGV Trigger: CACCCCACTCCCAGGTCCCCATCCCTTGCTTTCCTG...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCCCAGCCCTGCAGAAGGTTCTaGGTGGAGAGAAGAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PLLPIQVPVLGLGSSIPQPCRRF*VERREQ Trigger: TTGCTCTCTTCTCTCCACCCAGAACCTTCTGCAGGG...CTGGGGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCCCAGAGTTCCCTCAGCTTCTaGGACATGCCATCTCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: PLLPIQVPVLGLGSSIPQSSLSF*DMPSLY Trigger: GTAGAGAGATGGCATGTCCCAGAAGCTGAGGGAACT...CTGGGGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCAAGTTCCCTCAGCTTCTaGGACATGCCATCTCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: GGEEGIPHPRCPPLGPSASSLSF*DMPSLY Trigger: GTAGAGAGATGGCATGTCCCAGAAGCTGAGGGAACT...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCTGAGCTGCTCTTCCTaGCTCTACCATCCAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHLSCSS*LYHPEG Trigger: CCCTTCTGGATGGTAGAGCCAGGAAGAGCAGCTCAG...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCTCAGCTTCTGGGACATaGCATCTCTCTACTATGCGA | + |
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Preference number: 2 (lower is better) Translates to: PAPTSHTGPSPWTGLQHPSASGT*HLSTMR Trigger: TCGCATAGTAGAGAGATGGCATGTCCCAGAAGCTGA...GGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTAAACTATCTCAGGCCCCTAAGTCCCACAGGGAGTCACCCTGTCCCTTCATCCCAGTCCTTGGACTaGGCTCCAGCATCCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NLNYLRPLSPTGSHPVPSSQSLD*APASPR Trigger: CCTGGGGGATGCTGGAGCCCAGTCCAAGGACTGGGA...TGAAGGGACAGGGTGACTCCCTGTGGGACTTAGGGGCCTGAGATAGTTTAAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCAATGCACACATACAGGTaGAGACAACACACGCATACA | + |
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Preference number: 2 (lower is better) Translates to: GGEEGIPHPRCPPLGPSAMHTYR*RQHTHT Trigger: TGTATGCGTGTGTTGTCTGCACCTGTATGTGTGCAT...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCACACACACCTCATCTCTaGTTTCTCTCCGGAAATTTT | + |
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Preference number: 2 (lower is better) Translates to: GGEEGIPHPRCPPLGPSAHTPHL*FLSGNF Trigger: AAAATTTCCGGAGAGAAAGCAGAGATGAGGTGTGTG...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCGCTCAGAGCCCTGGCTaGAGAGCTGAGCTGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFAQSPG*RAELLF Trigger: GAAGAGCAGCTCAGCTCTGCAGCCAGGGCTCTGAGC...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR TCA 90 bp | ATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGAGAGGGACGGGGAGCAACTCAGGGGAGGGTaGAATAGTGAGAAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ITMEGTRKGQAKKERDGEQLRGG*NSEKGK Trigger: CTTCCCTTTCTCACTATTTCACCCTCCCCTGAGTTG...CTCCCCGTCCCTCTCTTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATTACCCTCTCATCCTATaGTCAAAACCCAAATGTATC | + |
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Preference number: 2 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHYPLIL*SKPKCI Trigger: GATACATTTGGGTTTTGATCATAGGATGAGAGGGTA...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTAGGACAACCTCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGCACACACCTCATCTCTaGTTTCTCTCCGGAAATTTT | + |
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Preference number: 2 (lower is better) Translates to: SARTTSLPSTPNRKARDGHTPHL*FLSGNF Trigger: AAAATTTCCGGAGAGAAAGCAGAGATGAGGTGTGTG...CCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGAGGTTGTCCTAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGGAGGACTCTATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAACTGAGCTGCTCTTCCTaGCTCTACCATCCAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TGEDSITMEGTRKGQAKKLSCSS*LYHPEG Trigger: CCCTTCTGGATGGTAGAGCCAGGAAGAGCAGCTCAG...TTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTATAGAGTCCTCCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTAAACTATCTCAGGCCCCTAAGTCCCACAGGGAGTCACCCTGTCCCTTCACTCTGGAGCAAGTGCTaGCAGCTGACTTTAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: NLNYLRPLSPTGSHPVPSLWSKC*QLTLGN Trigger: GTTTCCTAAAGTCAGCTGCCAGCACTTGCTCCAGAG...TGAAGGGACAGGGTGACTCCCTGTGGGACTTAGGGGCCTGAGATAGTTTAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTAGAGGGGCTGCCTGGAAGGACAGGCAGCTGAGAAACCTAGATTTGATAGCAGAAGGTTCTGGGTaGAGAGAAGAGAGCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SSRGAAWKDRQLRNLDLIAEGSG*REESKS Trigger: ACTCTTGCTCTCTTCTCTCCACCCAGAACCTTCTGC...TATCAAATCTAGGTTTCTCAGCTGCCTGTCCTTCCAGGCAGCCCCTCTAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGTTTTGTCAACTCTGGAGCAAGTGCTGGCAGCTGACTTTAGGAAACTACCTGCTGCAGAGCTGAGCTaGTCTTCCTGGCTCTACCAT | + |
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Preference number: 2 (lower is better) Translates to: VVLSTLEQVLAADFRKLPAAELS*SSWLYH Trigger: ATGGTAGAGCCAGGAAGAGCAGCTCAGCTCTGCAGC...AGGTAGTTTCCTAAAGTCAGCTGCCAGCACTTGCTCCAGAGTTGACAAAACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCCAACTCAGGGGAGGGTaGAATAGTGAGAAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFQLRGG*NSEKGK Trigger: CTTCCCTTTCTCACTATTTCACCCTCCCCTGAGTTG...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAACACAGGCTGTTTCTGCCTCCTCCTCGCCCCCAAGTGGGTTCACAGCAGTCAGAATTCCTTCCAGTaGGGGAACAATATTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KNTGCFCLLLAPKWVHSSQNSFQ*GNNISS Trigger: TGAAGAAATATTGTTCCCCCACTGGAAGGAATTCTG...ACTGCTGTGAACCCACTTGGGGGCGAGGAGGAGGCAGAAACAGCCTGTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCTCTCCGGAAATTTTAGAGGGAGCAGCACTAGAAGAGGGGATGAAAGATCAGCTTCTGGGACATaGCATCTCTCTACTATGCGA | + |
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Preference number: 2 (lower is better) Translates to: CFLSGNFRGSSTRRGDERSASGT*HLSTMR Trigger: TCGCATAGTAGAGAGATGGCATGTCCCAGAAGCTGA...TCTTTCATCCCCTCTTCTAGTGCTGCTCCCTCTAAAATTTCCGGAGAGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAGCTGAGAAACCTAGATTTGATAAAGAGCAGGCCAGACAAAAACCTATCGTAAGAGGATTTTTCTaGTGGATCCCTCCTCTATGC | + |
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Preference number: 2 (lower is better) Translates to: QAAEKPRFDKEQARQKPIVRGFF*WIPPLC Trigger: GCATAGAGGAGGGATCCAGCAGAAAAATCCTCTTAC...GATAGGTTTTTGTCTGGCCTGCTCTTTATCAAATCTAGGTTTCTCAGCTGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR GCA 72 bp | TTCCCTCAGCTTCTGGGACATGCCATCTCTCTACTATaGGAACCCCTCCACATGGTAGGGGCGCTCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: FPQLLGHAISLL*EPLHMVGALHP Trigger: GGGATGGAGCGCCCCTACCATGTGGAGGGGTTCGCATAGTAGAGAGATGGCATGTCCCAGAAGCTGAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR GCA 72 bp | CCGACCCAATCTCGAGTTCCCTCAGCTTCTGGGACATaGCATCTCTCTACTATGCGAACCCCTCCACATGGT | + |
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Preference number: 3 (lower is better) Translates to: PTQSRVPSASGT*HLSTMRTPPHG Trigger: ACCATGTGGAGGGGTTCGCATAGTAGAGAGATGGCATGTCCCAGAAGCTGAGGGAACTCGAGATTGGGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR GCA 72 bp | AGGCAACCTGCAGGCATGGCCAACTTCGCTCTTGCCTaGAGCCTTCTTTGTAAGAAAGGGAACCTCTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: RQPAGMANFALA*SLLCKKGNLWL Trigger: TAGCCAGAGGTTCCCTTTCTTACAAAGAAGGCTGCAGGCAAGAGCGAAGTTGGCCATGCCTGCAGGTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR CCA 72 bp | CTTGCCTGCAGCCTTCTTTGTAAGAAAGGGAACCTCTaGCTAGGTTCACAGGAGGTGGGGAAAGAGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LACSLLCKKGNL*LGSQEVGKEGE Trigger: TTCTCCCTCTTTCCCCACCTCCTGTGAACCTAGCCAGAGGTTCCCTTTCTTACAAAGAAGGCTGCAGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR CCA 72 bp | GGGGACAGAGAGACAGCTTCCCAGAATTCCTTCCAGTaGGGGAACAATATTTCTTCACATGGAAGGAGATTT | + |
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Preference number: 3 (lower is better) Translates to: GDRETASQNSFQ*GNNISSHGRRF Trigger: AAATCTCCTTCCATGTGAAGAAATATTGTTCCCCCACTGGAAGGAATTCTGGGAAGCTGTCTCTCTGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCTGTCGACTGCTGAGTTaGCTTTCTTTTACAAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFCRLLS*LSFTRS Trigger: AGACCTTGTAAAAGAAAGCAAACTCAGCAGTCGACA...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| 3UTR CCA 72 bp | GAACAATATTTCTTCACATGGAAGGAGATTTTCTACTaGGGAGGACTCTATAACAATGGAGGGAACACGGAA | + |
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Preference number: 3 (lower is better) Translates to: EQYFFTWKEIFY*GGLYNNGGNTE Trigger: TTCCGTGTTCCCTCCATTGTTATAGAGTCCTCCCCAGTAGAAAATCTCCTTCCATGTGAAGAAATATTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGAGTGGGGCCCAGCGGGAGGCTCTaGAGCTCTCCAGGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLPSTPNRKARDGDLGVGPSGRL*SSPGCS Trigger: GCTGCAGCCTGGAGAGCTGCAGAGCCTCCCGCTGGG...CCCCACTCCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR CCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCACTTAGCCCCGTCGGGTaGCCCCAGAAGGTGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GGEEGIPHPRCPPLGPSALSPVG*PQKVLP Trigger: GGGCAGCACCTTCTGGGGCCACCCGACGGGGCTAAG...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR GCA 90 bp | TCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCCAGCGGGAGGCTCTaGAGCTCTCCAGGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SQPLLPIQVPVLGLGSSIPSGRL*SSPGCS Trigger: GCTGCAGCCTGGAGAGCTGCAGAGCCTCCCGCTGGG...GATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR GCA 90 bp | AGAGGGAGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTGGCCCCAGAAGGTGCTaGCCACCAGCGGCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGSSTRRGDERDLGRRAAGPRRC*PPAAGR Trigger: CCTCCCAGCCGCTGGTGGGCAGCACCTTCTGGGGCC...AGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCTCCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR CCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCACCGCCTCCAGGCAGTTaGGGCAGCGACACACGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GGEEGIPHPRCPPLGPSAPPPGS*GSDTRS Trigger: AGACCGTGTGTCGCTGCCCCAACTGCCTGGAGGCGG...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR TCA 90 bp | CCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCCCAGGAGGTCAGCGCTCCCTaGGTATGGGGGAGGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: PLLPIQVPVLGLGSSIPQEVSAP*VWGRSI Trigger: GATGGACCTCCCCCATACTCAGGGAGCGCTGACCTC...CTGGGGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCCCGGATGGCCAGGTaGGGTCAGCGCTCCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RGSSTRRGDERDLGRRAAPRMAR*GQRSLS Trigger: ACTCAGGGAGCGCTGACCTCACCTGGCCATCCGGGG...AGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCTCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCGGTCCATCCAGCTGGTaGCGGGATGAAGGTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PAPTSHTGPSPWTGLQHPGPSSW*RDEGPT Trigger: GGTGGGACCTTCATCCCGGCACCAGCTGGATGGACC...GGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGAGTGGGGCCGGCTGCAGGAGCTTaGAAAAGGGTCCCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSTPNRKARDGDLGVGPAAGA*KRVPVP Trigger: TGGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGG...CCCCACTCCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCGCCTCCAGGCAGTTaGGGCAGCGACACACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQPLLPIQVPVLGLGSSIPPPGS*GSDTRS Trigger: AGACCGTGTGTCGCTGCCCCAACTGCCTGGAGGCGG...GATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGAGTGGGGCTTCGGCCTCACGTTTaGCTTTGCCCCCGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSTPNRKARDGDLGVGLRPHV*LCPRVV Trigger: AACCACCCGGGGGCAAAGGCAAACGTGAGGCCGAAG...CCCCACTCCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCTAGGACAACCTCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGGCGCGTCGGTGTGCTaGCTGCCCAGAGAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SARTTSLPSTPNRKARDGGASVC*LPREPQ Trigger: CTGTGGCTCTCTGGGCAGCCAGCACACCGACGCGCC...CCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGAGGTTGTCCTAGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | ATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGAGAGGGACGGGGAGCGCGGCGGTGAAGCGTaGGGCGCGTCGGTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITMEGTRKGQAKKERDGERGGEA*GASVCW Trigger: CCAGCACACCGACGCGCCTCACGCTTCACCGCCGCG...CTCCCCGTCCCTCTCTTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGTGCTTTTATGTCCCCCGGATGGCCAGGTaGGGTCAGCGCTCCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGDERDLGRRAAPRCFYVPRMAR*GQRSLS Trigger: ACTCAGGGAGCGCTGACCTCACCTGGCCATCCGGGG...GACATAAAAGCACCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCTATGTCTGGAGAGGTTaGAGGTCGAGGCGCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQPLLPIQVPVLGLGSSIYVWRG*RSRRGG Trigger: ACCGCCGCGCCTCGACCTGCAACCTCTCCAGACATA...GATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGACGAGCCATCCTCTGTaGCTGGGTGAGTCGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSTRRGDERDLGRRAAPRTSHPL*LGESAG Trigger: TCCGGCCGACTCACCCAGGCACAGAGGATGGCTCGT...CCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATGGTCCATCCAGCTGGTaGCGGGATGAAGGTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHGPSSW*RDEGPT Trigger: GGTGGGACCTTCATCCCGGCACCAGCTGGATGGACC...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCAGCGACACACGGTCTaGCCTGAGCTGCGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHQRHTV*PELRGT Trigger: AGTTCCCCGCAGCTCAGGGCAGACCGTGTGTCGCTG...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCGCAAATGCTTCTTCTTaGCCCCATCGGGCCCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SQPLLPIQVPVLGLGSSIANASS*PHRART Trigger: CGTGCGGGCCCGATGGGGGCAAGAAGAAGCATTTGC...GATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGCTGTGCCACCGCAGGTaGGCCTTCAGATGCGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTRRGDERDLGRRAAPRLCHRR*AFRCDV Trigger: GACGTCGCATCTGAAGGCGCACCTGCGGTGGCACAG...CCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATGGAGGTCCATCCAGCTaGTGCCGGGATGAAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHGGPSS*CRDEGP Trigger: GGGACCTTCATCCCGGCACCAGCTGGATGGACCTCC...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCCAACTCATAGCCCTGTaGAAAGTCTACCTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAPTSHTGPSPWTGLQHPQLIAL*KVYLRA Trigger: GGCCCGGAGGTAGACTTTTCACAGGGCTATGAGTTG...GGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCACGATTCATAGTGGTGTaGCATGTCCGGCTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGEEGIPHPRCPPLGPSARFIVV*HVRLQE Trigger: CTCCTGCAGCCGGACATGTCACACCACTATGAATCG...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATTATGTCTGGAGAGGTTaGAGGTCGAGGCGCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHYVWRG*RSRRGG Trigger: ACCGCCGCGCCTCGACCTGCAACCTCTCCAGACATA...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGGCAAATGCTTCTTCTTaGCCCCATCGGGCCCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SSTRRGDERDLGRRAAPRANASS*PHRART Trigger: CGTGCGGGCCCGATGGGGGCAAGAAGAAGCATTTGC...CCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGCCGCCGCCTCCTCTTTaGCGCCTTCGTGGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTRRGDERDLGRRAAPRPPPPL*RLRGFS Trigger: TGAAAACCCACGAAGGCGCCAAAGAGGAGGCGGCGG...CCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | ATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGAGAGGGACGGGGAGGCCTTTGCCCCCGGGTaGTTCCACCACGCCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITMEGTRKGQAKKERDGEAFAPG*FHHATG Trigger: GCCGGTGGCGTGGTGGAACCACCCGGGGGCAAAGGC...CTCCCCGTCCCTCTCTTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACACAGGCTGTTTCTGCCTCCTCCTCGCCCCCAAGTGGGTTCACAGCAGTGAGGTCAGCGCTCCCTaGGTATGGGGGAGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KNTGCFCLLLAPKWVHSSEVSAP*VWGRSI Trigger: GATGGACCTCCCCCATACTCAGGGAGCGCTGACCTC...ACTGCTGTGAACCCACTTGGGGGCGAGGAGGAGGCAGAAACAGCCTGTGTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGTGCTTTTATGTCACGAGCCATCCTCTGTaGCTGGGTGAGTCGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGDERDLGRRAAPRCFYVTSHPL*LGESAG Trigger: TCCGGCCGACTCACCCAGGCACAGAGGATGGCTCGT...GACATAAAAGCACCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTTCTCTCCGGAAATTTTAGAGGGAGCAGCACTAGAAGAGGGGATGAAAGACGCGGCGGTGAAGCGTaGGGCGCGTCGGTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLSGNFRGSSTRRGDERRGGEA*GASVCW Trigger: CCAGCACACCGACGCGCCTCACGCTTCACCGCCGCG...TCTTTCATCCCCTCTTCTAGTGCTGCTCCCTCTAAAATTTCCGGAGAGAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACACAGGCTGTTTCTGCCTCCTCCTCGCCCCCAAGTGGGTTCACAGCAGTGGCGGAGCACAGAGCTaGTGGTCTCCGACGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTGCFCLLLAPKWVHSSGGAQS*WSPTYP Trigger: AGGATACGTCGGAGACCATCAGCTCTGTGCTCCGCC...ACTGCTGTGAACCCACTTGGGGGCGAGGAGGAGGCAGAAACAGCCTGTGTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGTGCTTTTATGTCGGCGGAGCACAGAGCTaGTGGTCTCCGACGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGDERDLGRRAAPRCFYVGGAQS*WSPTYP Trigger: AGGATACGTCGGAGACCATCAGCTCTGTGCTCCGCC...GACATAAAAGCACCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | ATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGAGAGGGACGGGGAGGGTGGTCGCTGCGCATaGAGACTCGGCTGCAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: ITMEGTRKGQAKKERDGEGGRCA*RLGCRP Trigger: CGGTCTGCAGCCGAGTCTTCATGCGCAGCGACCACC...CTCCCCGTCCCTCTCTTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTAGAGGGGCTGCCTGGAAGGACAGGCAGCTGAGAAACCTAGATTTGATAGGTGGTCGCTGCGCATaGAGACTCGGCTGCAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRGAAWKDRQLRNLDLIGGRCA*RLGCRP Trigger: CGGTCTGCAGCCGAGTCTTCATGCGCAGCGACCACC...TATCAAATCTAGGTTTCTCAGCTGCCTGTCCTTCCAGGCAGCCCCTCTAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | GACAACCTCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGTGTGACATGTCCGGCTaGAGGAGCTTGGAAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNLSPFHPQQESKGWGPGCDMSG*RSLEKG Trigger: ACCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACA...CCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGAGGTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGAGGACTCTATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGGCCCCAGAAGGTGCTaGCCACCAGCGGCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGEDSITMEGTRKGQAKKGPRRC*PPAAGR Trigger: CCTCCCAGCCGCTGGTGGGCAGCACCTTCTGGGGCC...TTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTATAGAGTCCTCCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGAGAAGAAGGCATCCCACACCCACGGTGCCCTCCTTTAGGCCCCTCTGCAGGGATGTGGCAGTTGTaGAAATGCTTCTTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEEGIPHPRCPPLGPSAGMWQL*KCFFLP Trigger: GGGCAAGAAGAAGCATTTGCACAACTGCCACATCCC...TGCAGAGGGGCCTAAAGGAGGGCACCGTGGGTGTGGGATGCCTTCTTCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCGCAGCCTGGGATGTaGCAGTTGTGCAAATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPAPTSHTGPSPWTGLQHPQPGM*QLCKCF Trigger: GAAGCATTTGCACAACTGCCACATCCCAGGCTGCGG...ATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGAGTGGGGTCTTTGGCGCCTTCGTaGGTTTTCATGTGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSTPNRKARDGDLGVGSLAPS*VFMCLA Trigger: GGCCAAACACATGAAAACCCACGAAGGCGCCAAAGA...CCCCACTCCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AATAGTGAGAAAGGGAAGAAGCGAGGGGCGTGTTCAGCTCCTGGCAGCCTAAATGCCTCCGGGCTCGTGTaGCCCTGGTATGTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGKKRGACSAPGSLNASGLV*PWYVWR Trigger: TCTCCAGACATACCAGGGTCACACGAGCCCGGAGGC...ATTTAGGCTGCCAGGAGCTGAACACGCCCCTCGCTTCTTCCCTTTCTCACTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AATAGTGAGAAAGGGAAGAAGCGAGGGGCGTGTTCAGCTCCTGGCAGCCTAAATTCCTCTGTGCCTGGGTaGGTCGGCCGGAACCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGKKRGACSAPGSLNSSVPG*VGRNHD Trigger: ATCGTGGTTCCGGCCGACTCACCCAGGCACAGAGGA...ATTTAGGCTGCCAGGAGCTGAACACGCCCCTCGCTTCTTCCCTTTCTCACTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | GACAACCTCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGTGGCAGTTGTGCAAATaGTTCTTCTTGCCCCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: DNLSPFHPQQESKGWGPGWQLCK*FFLPPS Trigger: CGATGGGGGCAAGAAGAAGCATTTGCACAACTGCCA...CCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGAGGTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AACTTAAACTATCTCAGGCCCCTAAGTCCCACAGGGAGTCACCCTGTCCCTTCACTGTGCCACCGCAGGTaGGCCTTCAGATGCGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLNYLRPLSPTGSHPVPSLCHRR*AFRCDV Trigger: GACGTCGCATCTGAAGGCGCACCTGCGGTGGCACAG...TGAAGGGACAGGGTGACTCCCTGTGGGACTTAGGGGCCTGAGATAGTTTAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCTCTTTGGCGCCTTCGTaGGTTTTCATGTGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQPLLPIQVPVLGLGSSISLAPS*VFMCLA Trigger: GGCCAAACACATGAAAACCCACGAAGGCGCCAAAGA...GATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | ATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGAGAGGGACGGGGAGCTGGAATCCAGCCCTTaGGACTCTTGTGCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITMEGTRKGQAKKERDGELESSP*DSCAAA Trigger: AGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAG...CTCCCCGTCCCTCTCTTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTAGAGGGGCTGCCTGGAAGGACAGGCAGCTGAGAAACCTAGATTTGATACTGGAATCCAGCCCTTaGGACTCTTGTGCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRGAAWKDRQLRNLDLILESSP*DSCAAA Trigger: AGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAG...TATCAAATCTAGGTTTCTCAGCTGCCTGTCCTTCCAGGCAGCCCCTCTAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGCTGAGAAACCTAGATTTGATAAAGAGCAGGCCAGACAAAAACCTATCGCCTTTGCCCCCGGGTaGTTCCACCACGCCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAAEKPRFDKEQARQKPIAFAPG*FHHATG Trigger: GCCGGTGGCGTGGTGGAACCACCCGGGGGCAAAGGC...GATAGGTTTTTGTCTGGCCTGCTCTTTATCAAATCTAGGTTTCTCAGCTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGGAGGACTCTATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGCCTCCGGGCTCGTGTaGCCCTGGTATGTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGEDSITMEGTRKGQAKKASGLV*PWYVWR Trigger: TCTCCAGACATACCAGGGTCACACGAGCCCGGAGGC...TTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTATAGAGTCCTCCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCTCCTCTGTGCCTGGGTaGGTCGGCCGGAACCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFSSVPG*VGRNHD Trigger: ATCGTGGTTCCGGCCGACTCACCCAGGCACAGAGGA...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGCTGAGAAACCTAGATTTGATAAAGAGCAGGCCAGACAAAAACCTATCGGCGCGTCGGTGTGCTaGCTGCCCAGAGAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QAAEKPRFDKEQARQKPIGASVC*LPREPQ Trigger: CTGTGGCTCTCTGGGCAGCCAGCACACCGACGCGCC...GATAGGTTTTTGTCTGGCCTGCTCTTTATCAAATCTAGGTTTCTCAGCTGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTCCCTTTCCCTGTCCCCTCATCACCAATAAATAACCACCTTCCTCTTACTCCGGCTGCAGGAGCTTaGAAAAGGGTCCCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVPFPVPSSPINNHLPLTPAAGA*KRVPVP Trigger: TGGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGG...AGTAAGAGGAAGGTGGTTATTTATTGGTGATGAGGGGACAGGGAAAGGGACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR TCA 90 bp | AACTTAAACTATCTCAGGCCCCTAAGTCCCACAGGGAGTCACCCTGTCCCTTCACGATTCATAGTGGTGTaGCATGTCCGGCTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLNYLRPLSPTGSHPVPSRFIVV*HVRLQE Trigger: CTCCTGCAGCCGGACATGTCACACCACTATGAATCG...TGAAGGGACAGGGTGACTCCCTGTGGGACTTAGGGGCCTGAGATAGTTTAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTTTGTCAACTCTGGAGCAAGTGCTGGCAGCTGACTTTAGGAAACTACCTCAGCGACACACGGTCTaGCCTGAGCTGCGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VVLSTLEQVLAADFRKLPQRHTV*PELRGT Trigger: AGTTCCCCGCAGCTCAGGGCAGACCGTGTGTCGCTG...AGGTAGTTTCCTAAAGTCAGCTGCCAGCACTTGCTCCAGAGTTGACAAAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCCCTCACGTTTGCCTTTaGCCCCGGGTGGTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFPHVCL*PRVVPP Trigger: TGGTGGAACCACCCGGGGGCAAAGGCAAACGTGAGG...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGAGGACTCTATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAACCTCACGTTTGCCTTTaGCCCCGGGTGGTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TGEDSITMEGTRKGQAKKPHVCL*PRVVPP Trigger: TGGTGGAACCACCCGGGGGCAAAGGCAAACGTGAGG...TTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTATAGAGTCCTCCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTAGAGGGGCTGCCTGGAAGGACAGGCAGCTGAGAAACCTAGATTTGATACCGCAGCCTGGGATGTaGCAGTTGTGCAAATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRGAAWKDRQLRNLDLIPQPGM*QLCKCF Trigger: GAAGCATTTGCACAACTGCCACATCCCAGGCTGCGG...TATCAAATCTAGGTTTCTCAGCTGCCTGTCCTTCCAGGCAGCCCCTCTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTAGAGGGGCTGCCTGGAAGGACAGGCAGCTGAGAAACCTAGATTTGATACACAGGGGAACTTCTTaGTCCCGGTGTGGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSRGAAWKDRQLRNLDLIHRGTS*SRCGSE Trigger: TTCAGACCCACACCGGGACCAAGAAGTTCCCCTGTG...TATCAAATCTAGGTTTCTCAGCTGCCTGTCCTTCCAGGCAGCCCCTCTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTTTGTCAACTCTGGAGCAAGTGCTGGCAGCTGACTTTAGGAAACTACCTCTTCGGCCTCACGTTTaGCTTTGCCCCCGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVLSTLEQVLAADFRKLPLRPHV*LCPRVV Trigger: AACCACCCGGGGGCAAAGGCAAACGTGAGGCCGAAG...AGGTAGTTTCCTAAAGTCAGCTGCCAGCACTTGCTCCAGAGTTGACAAAACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGCTGAGAAACCTAGATTTGATAAAGAGCAGGCCAGACAAAAACCTATCCCGCCGCCTCCTCTTTaGCGCCTTCGTGGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAAEKPRFDKEQARQKPIPPPPL*RLRGFS Trigger: TGAAAACCCACGAAGGCGCCAAAGAGGAGGCGGCGG...GATAGGTTTTTGTCTGGCCTGCTCTTTATCAAATCTAGGTTTCTCAGCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTTTGTCAACTCTGGAGCAAGTGCTGGCAGCTGACTTTAGGAAACTACCTGGAAAAGGGTCCCGGTaGCAAGGGACTGTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVLSTLEQVLAADFRKLPGKGSR*QGTVTF Trigger: GAAAGTGACAGTCCCTTGGCACCGGGACCCTTTTCC...AGGTAGTTTCCTAAAGTCAGCTGCCAGCACTTGCTCCAGAGTTGACAAAACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCTGTGACATGTCCGGCTaGAGGAGCTTGGAAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFCDMSG*RSLEKG Trigger: ACCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACA...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCTCTCCGGAAATTTTAGAGGGAGCAGCACTAGAAGAGGGGATGAAAGACACAGGGGAACTTCTTaGTCCCGGTGTGGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLSGNFRGSSTRRGDERHRGTS*SRCGSE Trigger: TTCAGACCCACACCGGGACCAAGAAGTTCCCCTGTG...TCTTTCATCCCCTCTTCTAGTGCTGCTCCCTCTAAAATTTCCGGAGAGAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| 3UTR CAA 72 bp | GCTGCCTGGAAGGACAGGCAGCTGAGAAACCTAGATTaGATAAAGAGCAGGCCAGACAAAAACCTATCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAWKDRQLRNLD*IKSRPDKNLSE Trigger: CTCGGATAGGTTTTTGTCTGGCCTGCTCTTTATCAAATCTAGGTTTCTCAGCTGCCTGTCCTTCCAGGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCTGGCAGTTGTGCAAATaGTTCTTCTTGCCCCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFWQLCK*FFLPPS Trigger: CGATGGGGGCAAGAAGAAGCATTTGCACAACTGCCA...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGCTGAGAAACCTAGATTTGATAAAGAGCAGGCCAGACAAAAACCTATCGGGATGTGGCAGTTGTaGAAATGCTTCTTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QAAEKPRFDKEQARQKPIGMWQL*KCFFLP Trigger: GGGCAAGAAGAAGCATTTGCACAACTGCCACATCCC...GATAGGTTTTTGTCTGGCCTGCTCTTTATCAAATCTAGGTTTCTCAGCTGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS CCA 90 bp | GGACGCCGAGCTGCCTTCGGCCTCACGTTTGCCTTTGCCCCCGGGTaGTTCCACCACGCCACCGGCCTTGCCCTCGCCTTGGGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRAAFGLTFAFAPG*FHHATGLALALGRR Trigger: GCGGCGGCCCAAGGCGAGGGCAAGGCCGGTGGCGTGGTGGAACCACCCGGGGGCAAAGGCAAACGTGAGGCCGAAGGCAGCTCGGCGTCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS GCA 90 bp | CCGCCTCCAGGCAGTTGGGGCAGCGACACACGGTCTGCCCTGAGCTaGGGGGAACTGATCGCCGGGAGCCTTTGGGTCGGGACGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPPGSWGSDTRSALS*GELIAGSLWVGTLH Trigger: ATGCAGCGTCCCGACCCAAAGGCTCCCGGCGATCAGTTCCCCGCAGCTCAGGGCAGACCGTGTGTCGCTGCCCCAACTGCCTGGAGGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS TCA 90 bp | GTGACCCTGGTATGTCTGGAGAGGTTGCAGGTCGAGGCGCGGCGGTaGAGCGTGAGGCGCGTCGGTGTGCTGGCTGCCCAGAGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VTLVCLERLQVEARR*SVRRVGVLAAQRAT Trigger: TGTGGCTCTCTGGGCAGCCAGCACACCGACGCGCCTCACGCTTCACCGCCGCGCCTCGACCTGCAACCTCTCCAGACATACCAGGGTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS TCA 90 bp | CTCGCAGGTTACCCGCGAGGAGGCCCCTGGCAACTCATAGCCCTGTaGAAAGTCTACCTCCGGGCCCAGCGGGAGGCTCTGCAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAGYPRGGPWQLIAL*KVYLRAQREALQLS Trigger: GGAGAGCTGCAGAGCCTCCCGCTGGGCCCGGAGGTAGACTTTTCACAGGGCTATGAGTTGCCAGGGGCCTCCTCGCGGGTAACCTGCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS GCA 90 bp | TCGGGACGCTGCATCCAGACTGGAATCCAGCCCTTGGGACTCTTGTaGGGCCGCTTCCAAGGCCTTAGCCCCGTCGGGTGGCCCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGRCIQTGIQPLGLL*GRFQGLSPVGWPQK Trigger: CTTCTGGGGCCACCCGACGGGGCTAAGGCCTTGGAAGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGTCTGGATGCAGCGTCCCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS TCA 90 bp | GACGTATCCTCCCAAAGCAGGCTGAAGCGCCCCCGGATGGCCAGGTaGGGTCAGCGCTCCCTGAGTATGGGGGAGGTCCATCCAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DVSSQSRLKRPRMAR*GQRSLSMGEVHPAG Trigger: ACCAGCTGGATGGACCTCCCCCATACTCAGGGAGCGCTGACCTCACCTGGCCATCCGGGGGCGCTTCAGCCTGCTTTGGGAGGATACGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS GCA 90 bp | GTGAGGTCAGCGCTCCCTGAGTATGGGGGAGGTCCATCCAGCTGGTaGCGGGATGAAGGTCCCACCACGAGCCATCCTCTGTGCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VRSALPEYGGGPSSW*RDEGPTTSHPLCLG Trigger: ACCCAGGCACAGAGGATGGCTCGTGGTGGGACCTTCATCCCGGCACCAGCTGGATGGACCTCCCCCATACTCAGGGAGCGCTGACCTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS CCA 90 bp | CAGGTGAGGTCAGCGCTCCCTGAGTATGGGGGAGGTCCATCCAGCTaGTGCCGGGATGAAGGTCCCACCACGAGCCATCCTCTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVRSALPEYGGGPSS*CRDEGPTTSHPLCL Trigger: CAGGCACAGAGGATGGCTCGTGGTGGGACCTTCATCCCGGCACCAGCTGGATGGACCTCCCCCATACTCAGGGAGCGCTGACCTCACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS CCA 90 bp | GAGCCTTTGGGTCGGGACGCTGCATCCAGACTGGAATCCAGCCCTTaGGACTCTTGTGCGGCCGCTTCCAAGGCCTTAGCCCCGTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EPLGRDAASRLESSP*DSCAAASKALAPSG Trigger: ACCCGACGGGGCTAAGGCCTTGGAAGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGTCTGGATGCAGCGTCCCGACCCAAAGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS CCA 90 bp | ACACGGTCTGCCCTGAGCTGCGGGGAACTGATCGCCGGGAGCCTTTaGGTCGGGACGCTGCATCCAGACTGGAATCCAGCCCTTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TRSALSCGELIAGSL*VGTLHPDWNPALGT Trigger: AGTCCCAAGGGCTGGATTCCAGTCTGGATGCAGCGTCCCGACCCAAAGGCTCCCGGCGATCAGTTCCCCGCAGCTCAGGGCAGACCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | GACAACCTCTCTCCCTTCCACCCCCAACAGGAAAGCAAGGGATGGGGACCTGGGGATCGCCGGGAGCCTTaGGGTCGGGACGCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: DNLSPFHPQQESKGWGPGDRREP*GRDAAS Trigger: GGATGCAGCGTCCCGACCCAAAGGCTCCCGGCGATC...CCCAGGTCCCCATCCCTTGCTTTCCTGTTGGGGGTGGAAGGGAGAGAGGTTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS CCA 90 bp | GAACTGATCGCCGGGAGCCTTTGGGTCGGGACGCTGCATCCAGACTaGAATCCAGCCCTTGGGACTCTTGTGCGGCCGCTTCCAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ELIAGSLWVGTLHPD*NPALGTLVRPLPRP Trigger: AGGCCTTGGAAGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGTCTGGATGCAGCGTCCCGACCCAAAGGCTCCCGGCGATCAGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGAGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTTCCGCCTCCAGGCAGTaGGGGCAGCGACACACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSTRRGDERDLGRRAASASRQ*GQRHTV Trigger: GACCGTGTGTCGCTGCCCCAACTGCCTGGAGGCGGA...AGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCTCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCGGGTTCCCAGGAACTAAAGACGTGTCCAGACAGCTTCCCCCAACGCCCGTATGTCTGGAGAGGTaGCAGGTCGAGGCGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: MSGFPGTKDVSRQLPPTPVCLER*QVEARR Trigger: CCGCCGCGCCTCGACCTGCAACCTCTCCAGACATAC...GGGCGTTGGGGGAAGCTGTCTGGACACGTCTTTAGTTCCTGGGAACCCGGACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCCCAGTGCAAATGCTTCTTCTaGCCCCCATCGGGCCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLLPIQVPVLGLGSSIPQCKCFF*PPSGPH Trigger: GTGCGGGCCCGATGGGGGCAAGAAGAAGCATTTGCA...CTGGGGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCGGGTTCCCAGGAACTAAAGACGTGTCCAGACAGCTTCCCCCAACGCCCCCTTCGGCCTCACGTTaGCCTTTGCCCCCGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MSGFPGTKDVSRQLPPTPPSASR*PLPPGG Trigger: ACCACCCGGGGGCAAAGGCAAACGTGAGGCCGAAGG...GGGCGTTGGGGGAAGCTGTCTGGACACGTCTTTAGTTCCTGGGAACCCGGACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS GCA 90 bp | TCCAGCTGGTGCCGGGATGAAGGTCCCACCACGAGCCATCCTCTGTaGCTGGGTGAGTCGGCCGGAACCACGATTCATAGTGGTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSWCRDEGPTTSHPL*LGESAGTTIHSGVT Trigger: TGTCACACCACTATGAATCGTGGTTCCGGCCGACTCACCCAGGCACAGAGGATGGCTCGTGGTGGGACCTTCATCCCGGCACCAGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACACAGGCTGTTTCTGCCTCCTCCTCGCCCCCAAGTGGGTTCACAGCAGTTCCGCCTCCAGGCAGTaGGGGCAGCGACACACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KNTGCFCLLLAPKWVHSSSASRQ*GQRHTV Trigger: GACCGTGTGTCGCTGCCCCAACTGCCTGGAGGCGGA...ACTGCTGTGAACCCACTTGGGGGCGAGGAGGAGGCAGAAACAGCCTGTGTTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS TCA 90 bp | CTCTGTGCCTGGGTGAGTCGGCCGGAACCACGATTCATAGTGGTGTaGCATGTCCGGCTGCAGGAGCTTGGAAAAGGGTCCCGGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LCAWVSRPEPRFIVV*HVRLQELGKGSRCQ Trigger: TTGGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACACCACTATGAATCGTGGTTCCGGCCGACTCACCCAGGCACAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGTGCTTTTATGTCGCCGCCGCCTCCTCTTaGGCGCCTTCGTGGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGDERDLGRRAAPRCFYVAAASS*APSWVF Trigger: GAAAACCCACGAAGGCGCCAAAGAGGAGGCGGCGGC...GACATAAAAGCACCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTGAGAAAGGGAAGAAGCGAGGGGCGTGTTCAGCTCCTGGCAGCCTAAATTCCGGCTGCAGGAGCTaGGAAAAGGGTCCCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSEKGKKRGACSAPGSLNSGCRS*EKGPGA Trigger: GGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGGA...ATTTAGGCTGCCAGGAGCTGAACACGCCCCTCGCTTCTTCCCTTTCTCACTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTACTTCCCATACAGGTCCCAGTCCTTGGACTGGGCTCCAGCATCCCCCAGCCTGGGATGTGGCAGTaGTGCAAATGCTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLPIQVPVLGLGSSIPQPGMWQ*CKCFFL Trigger: CAAGAAGAAGCATTTGCACAACTGCCACATCCCAGG...CTGGGGGATGCTGGAGCCCAGTCCAAGGACTGGGACCTGTATGGGAAGTAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTAGAGGGGCTGCCTGGAAGGACAGGCAGCTGAGAAACCTAGATTTGATACCTTCGGCCTCACGTTaGCCTTTGCCCCCGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRGAAWKDRQLRNLDLIPSASR*PLPPGG Trigger: ACCACCCGGGGGCAAAGGCAAACGTGAGGCCGAAGG...TATCAAATCTAGGTTTCTCAGCTGCCTGTCCTTCCAGGCAGCCCCTCTAGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS CCA 90 bp | GGAACCACGATTCATAGTGGTGTGACATGTCCGGCTGCAGGAGCTTaGAAAAGGGTCCCGGTGCCAAGGGACTGTCACTTTCCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTTIHSGVTCPAAGA*KRVPVPRDCHFPGP Trigger: AGGACCTGGAAAGTGACAGTCCCTTGGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACACCACTATGAATCGTGGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGAGGACTCTATAACAATGGAGGGAACACGGAAGGGTCAAGCTAAGAAAGATCGCCGGGAGCCTTaGGGTCGGGACGCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TGEDSITMEGTRKGQAKKDRREP*GRDAAS Trigger: GGATGCAGCGTCCCGACCCAAAGGCTCCCGGCGATC...TTTCTTAGCTTGACCCTTCCGTGTTCCCTCCATTGTTATAGAGTCCTCCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCCTTTCTACACAAACATATATTCCTACCCAGATCCCAGCCCCTACTTCGTATGTCTGGAGAGGTaGCAGGTCGAGGCGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRPFYTNIYSYPDPSPYFVCLER*QVEARR Trigger: CCGCCGCGCCTCGACCTGCAACCTCTCCAGACATAC...GAAGTAGGGGCTGGGATCTGGGTAGGAATATATGTTTGTGTAGAAAGGCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCACTAGAAGAGGGGATGAAAGAGACCTAGGCCGAAGGGCGGCTCCAAGGCCTGGGATGTGGCAGTaGTGCAAATGCTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTRRGDERDLGRRAAPRPGMWQ*CKCFFL Trigger: CAAGAAGAAGCATTTGCACAACTGCCACATCCCAGG...CCTTGGAGCCGCCCTTCGGCCTAGGTCTCTTTCATCCCCTCTTCTAGTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTTCTCTCCGGAAATTTTAGAGGGAGCAGCACTAGAAGAGGGGATGAAAGATCCGGCTGCAGGAGCTaGGAAAAGGGTCCCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLSGNFRGSSTRRGDERSGCRS*EKGPGA Trigger: GGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGGA...TCTTTCATCCCCTCTTCTAGTGCTGCTCCCTCTAAAATTTCCGGAGAGAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTTTTGTCAACTCTGGAGCAAGTGCTGGCAGCTGACTTTAGGAAACTACCTACTGGAATCCAGCCCTaGGGACTCTTGTGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VVLSTLEQVLAADFRKLPTGIQP*GLLCGR Trigger: GCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGT...AGGTAGTTTCCTAAAGTCAGCTGCCAGCACTTGCTCCAGAGTTGACAAAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
||
| CDS-3UTR CAA 90 bp | AGCGTCCCTTTCCCTGTCCCCTCATCACCAATAAATAACCACCTTCCTCTTACTTGCAAATGCTTCTTCTaGCCCCCATCGGGCCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: SVPFPVPSSPINNHLPLTCKCFF*PPSGPH Trigger: GTGCGGGCCCGATGGGGGCAAGAAGAAGCATTTGCA...AGTAAGAGGAAGGTGGTTATTTATTGGTGATGAGGGGACAGGGAAAGGGACGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CCA 72 bp | TTGTGCGGCCGCTTCCAAGGCCTTAGCCCCGTCGGGTaGCCCCAGAAGGTGCTGCCCACCAGCGGCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCGRFQGLSPVG*PQKVLPTSGWE Trigger: CTCCCAGCCGCTGGTGGGCAGCACCTTCTGGGGCCACCCGACGGGGCTAAGGCCTTGGAAGCGGCCGCACAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS GCA 72 bp | GGCAGTTGGGGCAGCGACACACGGTCTGCCCTGAGCTaGGGGGAACTGATCGCCGGGAGCCTTTGGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GSWGSDTRSALS*GELIAGSLWVG Trigger: CCCGACCCAAAGGCTCCCGGCGATCAGTTCCCCGCAGCTCAGGGCAGACCGTGTGTCGCTGCCCCAACTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS GCA 72 bp | TCCGCCTCCAGGCAGTTGGGGCAGCGACACACGGTCTaGCCTGAGCTGCGGGGAACTGATCGCCGGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SASRQLGQRHTV*PELRGTDRREP Trigger: AGGCTCCCGGCGATCAGTTCCCCGCAGCTCAGGGCAGACCGTGTGTCGCTGCCCCAACTGCCTGGAGGCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CCA 72 bp | GCTGCCTTCGGCCTCACGTTTGCCTTTGCCCCCGGGTaGTTCCACCACGCCACCGGCCTTGCCCTCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AAFGLTFAFAPG*FHHATGLALAL Trigger: CAAGGCGAGGGCAAGGCCGGTGGCGTGGTGGAACCACCCGGGGGCAAAGGCAAACGTGAGGCCGAAGGCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CAA 90 bp | GGGTCGGGACGCTGCATCCAGACTGGAATCCAGCCCTTGGGACTCTaGTGCGGCCGCTTCCAAGGCCTTAGCCCCGTCGGGTGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSGRCIQTGIQPLGL*CGRFQGLSPVGWPQ Trigger: CTGGGGCCACCCGACGGGGCTAAGGCCTTGGAAGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGTCTGGATGCAGCGTCCCGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS TCA 72 bp | GTATGTCTGGAGAGGTTGCAGGTCGAGGCGCGGCGGTaGAGCGTGAGGCGCGTCGGTGTGCTGGCTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VCLERLQVEARR*SVRRVGVLAAQ Trigger: CTGGGCAGCCAGCACACCGACGCGCCTCACGCTTCACCGCCGCGCCTCGACCTGCAACCTCTCCAGACATAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CAA 72 bp | CAGTTGGAGGACGCCGAGCTGCCTTCGGCCTCACGTTaGCCTTTGCCCCCGGGTGGTTCCACCACGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: QLEDAELPSASR*PLPPGGSTTPP Trigger: CGGTGGCGTGGTGGAACCACCCGGGGGCAAAGGCAAACGTGAGGCCGAAGGCAGCTCGGCGTCCTCCAACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CCA 72 bp | GCCCTGAGCTGCGGGGAACTGATCGCCGGGAGCCTTTaGGTCGGGACGCTGCATCCAGACTGGAATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ALSCGELIAGSL*VGTLHPDWNPA Trigger: GGCTGGATTCCAGTCTGGATGCAGCGTCCCGACCCAAAGGCTCCCGGCGATCAGTTCCCCGCAGCTCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CAA 90 bp | GGAGCCTTTGGGTCGGGACGCTGCATCCAGACTGGAATCCAGCCCTaGGGACTCTTGTGCGGCCGCTTCCAAGGCCTTAGCCCCGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GAFGSGRCIQTGIQP*GLLCGRFQGLSPVG Trigger: CCCGACGGGGCTAAGGCCTTGGAAGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGTCTGGATGCAGCGTCCCGACCCAAAGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS TCA 72 bp | TACCCGCGAGGAGGCCCCTGGCAACTCATAGCCCTGTaGAAAGTCTACCTCCGGGCCCAGCGGGAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: YPRGGPWQLIAL*KVYLRAQREAL Trigger: CAGAGCCTCCCGCTGGGCCCGGAGGTAGACTTTTCACAGGGCTATGAGTTGCCAGGGGCCTCCTCGCGGGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS TCA 72 bp | TCCCAAAGCAGGCTGAAGCGCCCCCGGATGGCCAGGTaGGGTCAGCGCTCCCTGAGTATGGGGGAGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SQSRLKRPRMAR*GQRSLSMGEVH Trigger: ATGGACCTCCCCCATACTCAGGGAGCGCTGACCTCACCTGGCCATCCGGGGGCGCTTCAGCCTGCTTTGGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CAA 72 bp | TGCCCTGAGCTGCGGGGAACTGATCGCCGGGAGCCTTaGGGTCGGGACGCTGCATCCAGACTGGAATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CPELRGTDRREP*GRDAASRLESS Trigger: GCTGGATTCCAGTCTGGATGCAGCGTCCCGACCCAAAGGCTCCCGGCGATCAGTTCCCCGCAGCTCAGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS GCA 72 bp | TGCATCCAGACTGGAATCCAGCCCTTGGGACTCTTGTaGGGCCGCTTCCAAGGCCTTAGCCCCGTCGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CIQTGIQPLGLL*GRFQGLSPVGW Trigger: CCACCCGACGGGGCTAAGGCCTTGGAAGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGTCTGGATGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CAA 72 bp | GGGTCGGGACGCTGCATCCAGACTGGAATCCAGCCCTaGGGACTCTTGTGCGGCCGCTTCCAAGGCCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: GSGRCIQTGIQP*GLLCGRFQGLS Trigger: GCTAAGGCCTTGGAAGCGGCCGCACAAGAGTCCCAAGGGCTGGATTCCAGTCTGGATGCAGCGTCCCGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS GCA 72 bp | CATGTCCGGCTGCAGGAGCTTGGAAAAGGGTCCCGGTaGCAAGGGACTGTCACTTTCCAGGTCCTCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HVRLQELGKGSR*QGTVTFQVLAG Trigger: ACCTGCGAGGACCTGGAAAGTGACAGTCCCTTGGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGGACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS TCA 72 bp | TGGGTGAGTCGGCCGGAACCACGATTCATAGTGGTGTaGCATGTCCGGCTGCAGGAGCTTGGAAAAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: WVSRPEPRFIVV*HVRLQELGKGS Trigger: GGACCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACACCACTATGAATCGTGGTTCCGGCCGACTCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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| CDS CCA 72 bp | ATTCATAGTGGTGTGACATGTCCGGCTGCAGGAGCTTaGAAAAGGGTCCCGGTGCCAAGGGACTGTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: IHSGVTCPAAGA*KRVPVPRDCHF Trigger: AAAGTGACAGTCCCTTGGCACCGGGACCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACACCACTATGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047997.8 ENSMUST00000107622.2 |
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