Pregenerated sensors for SP140 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070031Ensembl transcript IDs: ENSMUST00000080204.11, ENSMUST00000113385.3, ENSMUST00000161497.2, ENSMUST00000162925.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTTGAAGACCAGAGAGCAGCAATGCACCATACTCTTGATTTCATaGGGAGAAAGGGGGATGGACCCCCAGGCCAGGAGGTGTAACTCC | + |
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Preference number: 1 (lower is better) Translates to: PLKTREQQCTILLIS*GERGMDPQARRCNS Trigger: GGAGTTACACCTCCTGGCCTGGGGGTCCATCCCCCTTTCTCCCCATGAAATCAAGAGTATGGTGCATTGCTGCTCTCTGGTCTTCAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR GCA 90 bp | GAGAAAGGGGGATGGACCCCCAGGCCAGGAGGTGTAACTCCTAGCTaGACCTGTTTCCATATGACCAAGAGTAATCATCCGGGAATGATA | + |
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Preference number: 1 (lower is better) Translates to: EKGGWTPRPGGVTPS*TCFHMTKSNHPGMI Trigger: TATCATTCCCGGATGATTACTCTTGGTCATATGGAAACAGGTGCAGCTAGGAGTTACACCTCCTGGCCTGGGGGTCCATCCCCCTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGCATTGCTGCTGCAGGTaGGACAGACATGGCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GAKPAGDRLQPRPLKTREHCCCR*DRHGQV Trigger: CACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATG...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGGGTGTAACTCCTAGCTaGACCTGTTTCCATATGACC | + |
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Preference number: 2 (lower is better) Translates to: GAKPAGDRLQPRPLKTREGVTPS*TCFHMT Trigger: GGTCATATGGAAACAGGTGCAGCTAGGAGTTACACC...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGGAGGGGTTGAAGTGGTaGTGGAGCAAAGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKEGLKW*WSKASW Trigger: CCAGCTGGCTTTGCTCCACCACCACTTCAACCCCTC...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCCACTGGGACCAGGTTCTTACATGTTTCTTGATATTCCTGAAACTTCTGAGCTGATAGTCATCTaGCTCCTCTTCATTCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LSPLGPGSYMFLDIPETSELIVI*LLFILV Trigger: GACCAGAATGAAGAGGAGTCAGATGACTATCAGCTC...AGAAGTTTCAGGAATATCAAGAAACATGTAAGAACCTGGTCCCAGTGGAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113385.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGATACTCTTGATTTCATaGGGAGAAAGGGGGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKILLIS*GERGMD Trigger: GTCCATCCCCCTTTCTCCCCATGAAATCAAGAGTAT...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGACCAGAGAGCAGCAATaGACCATACTCTTGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKTREQQ*TILLIS Trigger: TGAAATCAAGAGTATGGTGCATTGCTGCTCTCTGGT...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| 3UTR CCA 72 bp | ACCAGAGAGCAGCAATGCACCATACTCTTGATTTCATaGGGAGAAAGGGGGATGGACCCCCAGGCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TREQQCTILLIS*GERGMDPQARR Trigger: CCTCCTGGCCTGGGGGTCCATCCCCCTTTCTCCCCATGAAATCAAGAGTATGGTGCATTGCTGCTCTCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR GCA 72 bp | GGATGGACCCCCAGGCCAGGAGGTGTAACTCCTAGCTaGACCTGTTTCCATATGACCAAGAGTAATCATCCG | + |
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Preference number: 3 (lower is better) Translates to: GWTPRPGGVTPS*TCFHMTKSNHP Trigger: CGGATGATTACTCTTGGTCATATGGAAACAGGTGCAGCTAGGAGTTACACCTCCTGGCCTGGGGGTCCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGCAATGCACCATACTCTaGATTTCATGGGGAGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GAKPAGDRLQPRPLKTREQCTIL*ISWGER Trigger: CCTTTCTCCCCATGAAATCAAGAGTATGGTGCATTG...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR GCA 72 bp | CTCCAGCCTAGACCCTTGAAGACCAGAGAGCAGCAATaGACCATACTCTTGATTTCATGGGGAGAAAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: LQPRPLKTREQQ*TILLISWGERG Trigger: CCCCCTTTCTCCCCATGAAATCAAGAGTATGGTGCATTGCTGCTCTCTGGTCTTCAAGGGTCTAGGCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR TCA 72 bp | ATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTaGGACAGACATGGCCAGGTGACACCAGCCATGTCT | + |
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Preference number: 3 (lower is better) Translates to: IESIKNTHCCCR*DRHGQVTPAMS Trigger: AGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| 3UTR TCA 72 bp | TTCTTTGAAGTGCTTGAACATGAGCTGATAGTCATCTaGCTCCTCTTCATTCTGGTCCTCTGGGATTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: FFEVLEHELIVI*LLFILVLWDCP Trigger: AGGACAATCCCAGAGGACCAGAATGAAGAGGAGTCAGATGACTATCAGCTCATGTTCAAGCACTTCAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113385.3 |
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| CDS-3UTR GCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGGCTGCTTCCCATCCTTaGTTCCAGGTCTTCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GAKPAGDRLQPRPLKTREAASHP*FQVFWH Trigger: GTGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGC...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR TCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTTCTTGTCTCAGGGATaGGGGCAGGTCATCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSFLSQG*GQVILG Trigger: CCCCAGGATGACCTGCCCTCATCCCTGAGACAAGAA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR GCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGGAATGTTCCTCCTGGTaGCCACACATTCTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GAKPAGDRLQPRPLKTREECSSW*PHILLG Trigger: GCCAAGGAGAATGTGTGGGCACCAGGAGGAACATTC...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR GCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGCACATTCTCCTTGGCTaGTTCCCATCCTTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GAKPAGDRLQPRPLKTREHILLG*FPSLLP Trigger: TGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTG...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR GCA 90 bp | CGAAGGCTCATGAGGAAAGGAAACGGCTTGGTGATGGCACTTGCGATCTCCACCGGACCCAAAGGCAAGTaGAGAGAATCCAGGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RRLMRKGNGLVMALAISTGPKGK*RESRQS Trigger: GCTCTGCCTGGATTCTCTGCACTTGCCTTTGGGTCC...GGTGGAGATCGCAAGTGCCATCACCAAGCCGTTTCCTTTCCTCATGAGCCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113385.3 |
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| 3UTR CAA 72 bp | GCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTaGAAGACCAGAGAGCAGCAATGCACCATACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AKPAGDRLQPRP*KTREQQCTILL Trigger: CAAGAGTATGGTGCATTGCTGCTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTGAGGGCAGGTCATCCTaGGGCTCTTGTCTTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSEGRSS*GSCLVC Trigger: ACAAACAAGACAAGAGCCCCAGGATGACCTGCCCTC...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR TCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTCCACTGTTGGGATATaGCAGTCCTCATGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSSTVGI*QSSWKA Trigger: AGCCTTCCATGAGGACTGTCATATCCCAACAGTGGA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTTCATTCTGGTCCTCTaGGATTGTCCTGCTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSFILVL*DCPAAE Trigger: CTCAGCAGCAGGACAATCCCAGAGGACCAGAATGAA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR GCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGTCTGCTCTTTTCTTTTaGGATGTATCCGTGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GAKPAGDRLQPRPLKTRESALFF*DVSVED Trigger: ATCCTCCACGGATACATCGCAAAAGAAAAGAGCAGA...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTGCTTCCAGGTCTTCTaGCACATATGTTGGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSCFQVF*HICWGT Trigger: TGTTCCCCAACATATGTGCCAGAAGACCTGGAAGCA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGGTATCCGTGGAGGATTaGGTAGAAAATTTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GAKPAGDRLQPRPLKTREVSVED*VENFSG Trigger: TCCAGAGAAATTTTCTACCCAATCCTCCACGGATAC...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR GCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGGCATTGCATCTCCTCTaGTTGTTCATCATTCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: GAKPAGDRLQPRPLKTREALHLL*LFIIRF Trigger: AAAACGAATGATGAACAAGCAGAGGAGATGCAATGC...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR GCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTCTCCTCCATTGCATTaGATCTCCTCTGCTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSSPPLH*ISSACS Trigger: TGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR GCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTAACCACATAGGCTCTTaGACACTCACAGTCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSNHIGS*TLTVIS Trigger: AGAGATGACTGTGAGTGTGCAAGAGCCTATGTGGTT...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTGGTAGAAAATTTCTCTaGATCAGGAGTTTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSGRKFL*IRSFRG Trigger: GCCCCTGAAACTCCTGATCCAGAGAAATTTTCTACC...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTGAAGATGCAACTCCATaGTGTTATCTCAGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSEDATP*CYLSFH Trigger: GTGGAAGCTGAGATAACACCATGGAGTTGCATCTTC...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTCAGTATCTCAGATTCTaGAAGACTCGGTTGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSQYLRF*KTRLTS Trigger: GGAAGTCAACCGAGTCTTCCAGAATCTGAGATACTG...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR CCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGAGGGTCCAACTGTTCCTaGGGAGCCATCTCCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRGSNCS*GAISLC Trigger: GCAGAGGGAGATGGCTCCCCAGGAACAGTTGGACCC...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161497.2 |
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| CDS-3UTR GCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTCTGCTCTTTTCTTTTaGGATGTATCCGTGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSSALFF*DVSVED Trigger: ATCCTCCACGGATACATCGCAAAAGAAAAGAGCAGA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR GCA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGAAGTTCTGTGTTCTCTaGTCTTTTCTTTTGCGATGT | + |
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Preference number: 4 (lower is better) Translates to: GAKPAGDRLQPRPLKTREKFCVL*SFLLRC Trigger: ACATCGCAAAAGAAAAGAGCAGAGAACACAGAACTT...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR GCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTATGAGCCTCATGTCTTaGACAAAGTCTTCTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSMSLMS*TKSSTW Trigger: CCAAGTAGAAGACTTTGTGCAAGACATGAGGCTCAT...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTGTATCCGTGGAGGATTaGGTAGAAAATTTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSVSVED*VENFSG Trigger: TCCAGAGAAATTTTCTACCCAATCCTCCACGGATAC...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS-3UTR TCA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTCTTGTCTCAGGGATaGGGGCAGGTCATCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFFLSQG*GQVILG Trigger: CCCCAGGATGACCTGCCCTCATCCCTGAGACAAGAA...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CCA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTCTCTGTACACTCATTaGCTTTCTCCATCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSSLYTH*LSPSWF Trigger: AAACCAAGATGGAGAAAGCCAATGAGTGTACAGAGA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR GCA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTGCTGCTTCCCATCCTTaGTTCCAGGTCTTCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFAASHP*FQVFWH Trigger: GTGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGC...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGACCCACACATTCTCCTTaGCTGCTTCCCATCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRPTHSP*LLPILA Trigger: AGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGG...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGCACTTCAACTGTTCCTaGGGAGCCATCTCCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKHFNCS*GAISLC Trigger: GCAGAGGGAGATGGCTCCCCAGGAACAGTTGAAGTG...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR TCA 90 bp | CCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGAAGGTCTCGAAGGCTCATaGGGAAAGGAAACGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGSLWFIVDCSQESKRQEGLEGS*GKETAW Trigger: CCAAGCCGTTTCCTTTCCTCATGAGCCTTCGAGACC...TTCTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGAGACTCCTCTTCATTCTaGTCCTCTGGGATTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRDSSSF*SSGIVL Trigger: CAGGACAATCCCAGAGGACCAGAATGAAGAGGAGTC...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CCA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTCCCACACATTCTCCTTaGCTGCTTCCCATCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFPTHSP*LLPILA Trigger: AGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGG...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR TCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGAGAGCTGATAGTCATCTaGCTCCTCTTCATTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRELIVI*LLFILV Trigger: GACCAGAATGAAGAGGAGTCAGATGACTATCAGCTC...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR TCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGACAAATTCCGAGGGTGTaGACCAGTTTCCATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRQIPRV*TSFHSD Trigger: GTCAGAATGGAAACTGGTTCACACCCTCGGAATTTG...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTCACATTCTCCTTGGCTaGTTCCCATCCTTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFHILLG*FPSLLP Trigger: TGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTG...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTGAATGTTCCTCCTGGTaGCCACACATTCTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLPHVTGSNSALKLAFSFECSSW*PHILLG Trigger: GCCAAGGAGAATGTGTGGGCACCAGGAGGAACATTC...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTGAGGGCAGGTCATCCTaGGGCTCTTGTCTTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLPHVTGSNSALKLAFSFEGRSS*GSCLVC Trigger: ACAAACAAGACAAGAGCCCCAGGATGACCTGCCCTC...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTCAGGAATGTTCCTCCTaGTGCCCACACATTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFQECSS*CPHILL Trigger: AAGGAGAATGTGTGGGCACCAGGAGGAACATTCCTG...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR TCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGATCTCCATCTTGGTTTTaGCCAGTTGTGGCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRSPSWF*PVVAFL Trigger: AAGAAAGGCCACAACTGGTCAAAACCAAGATGGAGA...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR TCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGCAAATTCCGAGGGTGTaGACCAGTTTCCATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKQIPRV*TSFHSD Trigger: GTCAGAATGGAAACTGGTTCACACCCTCGGAATTTG...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR TCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGACAGTTTCCAGTTCTTTaGCTTTCCATAGCCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRQFPVL*LSIASH Trigger: ATGGGAGGCTATGGAAAGTCAAAGAACTGGAAACTG...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGAATCCACTGTTGGGATATaGCAGTCCTCATGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSLWFIVDCSQESKRQESTVGI*QSSWKA Trigger: AGCCTTCCATGAGGACTGTCATATCCCAACAGTGGA...TTCTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR GCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGTTCCCTCTCCTCCATTaGATTGCATCTCCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKFPLLH*IASPLL Trigger: AAGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAA...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGAACAGGAATGTTCCTCCTaGTGCCCACACATTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGSLWFIVDCSQESKRQEQECSS*CPHILL Trigger: AAGGAGAATGTGTGGGCACCAGGAGGAACATTCCTG...TTCTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGACAGTATCTCAGATTCTaGAAGACTCGGTTGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRQYLRF*KTRLTS Trigger: GGAAGTCAACCGAGTCTTCCAGAATCTGAGATACTG...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGAGCATCCTACAGAAGATaGAACTCCATGGTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRASYRR*NSMVLS Trigger: AGATAACACCATGGAGTTGCATCTTCTGTAGGATGC...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTGCTTCCAGGTCTTCTaGCACATATGTTGGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KLPHVTGSNSALKLAFSFCFQVF*HICWGT Trigger: TGTTCCCCAACATATGTGCCAGAAGACCTGGAAGCA...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGGAAGATGCAACTCCATaGTGTTATCTCAGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKEDATP*CYLSFH Trigger: GTGGAAGCTGAGATAACACCATGGAGTTGCATCTTC...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR GCA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTCTCCTCCATTGCATTaGATCTCCTCTGCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLPHVTGSNSALKLAFSFSPPLH*ISSACS Trigger: TGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGA...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGGCATCCTACAGAAGATaGAACTCCATGGTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKASYRR*NSMVLS Trigger: AGATAACACCATGGAGTTGCATCTTCTGTAGGATGC...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CCA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGTTCTGGCACATATGTTaGGGAACATATGACACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKFWHIC*GTYDTG Trigger: TCCTGTGTCATATGTTCCCCAACATATGTGCCAGAA...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGAAGGTAGAAAATTTCTCTaGATCAGGAGTTTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSLWFIVDCSQESKRQEGRKFL*IRSFRG Trigger: GCCCCTGAAACTCCTGATCCAGAGAAATTTTCTACC...TTCTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR GCA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGAAAGTTCTGTGTTCTCTaGTCTTTTCTTTTGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRKFCVL*SFLLRC Trigger: ACATCGCAAAAGAAAAGAGCAGAGAACACAGAACTT...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTCTTCTCTGCTTCTTaGGTTTTCTTGCAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFFFSAS*VFLQEC Trigger: ACATTCCTGCAAGAAAACCCAAGAAGCAGAGAAGAA...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTCTCTGTACACTCATTaGCTTTCTCCATCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFSLYTH*LSPSWF Trigger: AAACCAAGATGGAGAAAGCCAATGAGTGTACAGAGA...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTGCATTGCATCTCCTCTaGTTGTTCATCATTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLPHVTGSNSALKLAFSFALHLL*LFIIRF Trigger: AAAACGAATGATGAACAAGCAGAGGAGATGCAATGC...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGAATTCTTCTCTGCTTCTTaGGTTTTCTTGCAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSLWFIVDCSQESKRQEFFSAS*VFLQEC Trigger: ACATTCCTGCAAGAAAACCCAAGAAGCAGAGAAGAA...TTCTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTGGCTGCTTCCCATCCTaGCTTCCAGGTCTTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSGCFPS*LPGLLA Trigger: TGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGCC...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGCTCTCCTCCATTGCATaGCATCTCCTCTGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAKPAGDRLQPRPLKTRELSSIA*HLLCLF Trigger: GAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAG...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTCTTCCCTCTCCTCCATaGCATTGCATCTCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSLPSPP*HCISSA Trigger: AGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAG...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGGTCATCCTGGGGCTCTaGTCTTGTTTGTCTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAKPAGDRLQPRPLKTREVILGL*SCLSCL Trigger: CAAACAAGACAAACAAGACAAGAGCCCCAGGATGAC...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGCTTGCGATCTCCACCTaGTTTTCTTTGAAGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAKPAGDRLQPRPLKTRELAIST*FSLKCL Trigger: CAAGCACTTCAAAGAAAACAAGGTGGAGATCGCAAG...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGGATGAGCCTCATGTCTaGCACAAAGTCTTCTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAKPAGDRLQPRPLKTREDEPHV*HKVFYL Trigger: CAAGTAGAAGACTTTGTGCAAGACATGAGGCTCATC...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS GCA 90 bp | GTTCCTCCTGGTGCCCACACATTCTCCTTGGCTGCTTCCCATCCTTaGTTCCAGGTCTTCTGGCACATATGTTGGGGAACATATGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VPPGAHTFSLAASHP*FQVFWHICWGTYDT Trigger: TGTGTCATATGTTCCCCAACATATGTGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGCACCAGGAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTCCTGGGGCTCTTGTCTaGTTTGTCTTGTTTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSPGALV*FVLFVH Trigger: GTGAACAAACAAGACAAACAAGACAAGAGCCCCAGG...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGTTCTCTGTACACTCATaGGCTTTCTCCATCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GAKPAGDRLQPRPLKTREFSVHS*AFSILV Trigger: AACCAAGATGGAGAAAGCCAATGAGTGTACAGAGAA...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCAGAGAGAAACTCTTCTCAAACTaGGACTCCAGTCTAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAKPAGDRLQPRPLKTREKLFSN*DSSLNP Trigger: GGGATTTAGACTGGAGTCCAAGTTTGAGAAGAGTTT...CTCTCTGGTCTTCAAGGGTCTAGGCTGGAGCCTGTCTCCAGCTGGCTTTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS GCA 90 bp | TTCTTCTCTGCTTCTTGGGTTTTCTTGCAGGAATGTTCCTCCTGGTaGCCACACATTCTCCTTGGCTGCTTCCCATCCTTGCTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FFSASWVFLQECSSW*PHILLGCFPSLLPG Trigger: ACCTGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGCACCAGGAGGAACATTCCTGCAAGAAAACCCAAGAAGCAGAGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTCAGTTTCCAGTTCTTaGACTTTCCATAGCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSSVSSS*TFHSLP Trigger: TGGGAGGCTATGGAAAGTCAAAGAACTGGAAACTGA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTGTATCCGTGGAGGATaGGGTAGAAAATTTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSCIRGG*GRKFLW Trigger: CCAGAGAAATTTTCTACCCAATCCTCCACGGATACA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTTTCTTCTCTGCTTCTaGGGTTTTCTTGCAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSFLLCF*GFLAGM Trigger: CATTCCTGCAAGAAAACCCAAGAAGCAGAGAAGAAA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTAAACTCTTCTCAAACTaGGACTCCAGTCTAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSKLFSN*DSSLNP Trigger: GGGATTTAGACTGGAGTCCAAGTTTGAGAAGAGTTT...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
||
| CDS CCA 90 bp | TTTTTCTTCTCTGCTTCTTGGGTTTTCTTGCAGGAATGTTCCTCCTaGTGCCCACACATTCTCCTTGGCTGCTTCCCATCCTTGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FFFSASWVFLQECSS*CPHILLGCFPSLLP Trigger: TGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGCACCAGGAGGAACATTCCTGCAAGAAAACCCAAGAAGCAGAGAAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTGCCCACACATTCTCCTaGGCTGCTTCCCATCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFAHTFS*AASHPC Trigger: GCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGC...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCTGCAGGTGAGACAGACATGGCCAGGTGACACCAGCCATGTCTCTTGTTCATCATTCGTTTaGGATGCATTTAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQVRQTWPGDTSHVSCSSFV*DAFRKK Trigger: CTTCTTCCTAAATGCATCCAAAACGAATGATGAACA...AGAGACATGGCTGGTGTCACCTGGCCATGTCTGTCTCACCTGCAGCAGCAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGACTTTTCACGTGTGGGTaGCTGTGCTCCTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRLFTCG*LCSCFL Trigger: CAAGAAGCAGGAGCACAGCAACCCACACGTGAAAAG...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTGGCTGCTTCCCATCCTaGCTTCCAGGTCTTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFGCFPS*LPGLLA Trigger: TGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGCC...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGAAGCCCACACATTCTCCTaGGCTGCTTCCCATCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSLWFIVDCSQESKRQEAHTFS*AASHPC Trigger: GCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGC...TTCTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTCTTTTCACGTGTGGGTaGCTGTGCTCCTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFLFTCG*LCSCFL Trigger: CAAGAAGCAGGAGCACAGCAACCCACACGTGAAAAG...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGACAACCACATAGGCTCTaGCACACTCACAGTCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRQPHRL*HTHSHL Trigger: GAGATGACTGTGAGTGTGCAAGAGCCTATGTGGTTG...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTCTCTCCTCCATTGCATaGCATCTCCTCTGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFLSSIA*HLLCLF Trigger: GAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAG...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTCTTCCCTCTCCTCCATaGCATTGCATCTCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFLPSPP*HCISSA Trigger: AGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAG...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTGTCATCCTGGGGCTCTaGTCTTGTTTGTCTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFVILGL*SCLSCL Trigger: CAAACAAGACAAACAAGACAAGAGCCCCAGGATGAC...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | TCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGCTGCTGCAGGTGAGATTGCATCTCCTCTGCTaGTTCATCATTCGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSGNDRVYKEHSLLLQVRLHLLC*FIIRFG Trigger: TCCAAAACGAATGATGAACAAGCAGAGGAGATGCAA...TCTCACCTGCAGCAGCAATGAGTGTTCTTTATAGACTCTATCATTCCCGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTCCTGGGGCTCTTGTCTaGTTTGTCTTGTTTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFPGALV*FVLFVH Trigger: GTGAACAAACAAGACAAACAAGACAAGAGCCCCAGG...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGAATTGGCTTTCTCCATCTaGGTTTTGACCAGTTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSLWFIVDCSQESKRQELAFSI*VLTSCG Trigger: GCCACAACTGGTCAAAACCAAGATGGAGAAAGCCAA...TTCTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTTGGCTTTCTCCATCTaGGTTTTGACCAGTTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFLAFSI*VLTSCG Trigger: GCCACAACTGGTCAAAACCAAGATGGAGAAAGCCAA...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGTCAGTTTCCAGTTCTTaGACTTTCCATAGCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKSVSSS*TFHSLP Trigger: TGGGAGGCTATGGAAAGTCAAAGAACTGGAAACTGA...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS CCA 90 bp | CTCCTCCATTGCATTGCATCTCCTCTGCTTGTTCATCATTCGTTTTaGATGCATTTAGGAAGAAGTGTTTTAGAGTCTCCTTTAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLHCIASPLLVHHSF*MHLGRSVLESPLSR Trigger: CCGACTTAAAGGAGACTCTAAAACACTTCTTCCTAAATGCATCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGTCCACCTTGTTTTCTTaGAAGTGCTTGAACATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKSTLFS*KCLNMS Trigger: GCTCATGTTCAAGCACTTCAAAGAAAACAAGGTGGA...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGGGGCTCTTGTCTTGTTaGTCTTGTTTGTTCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKGLLSC*SCLFTR Trigger: TCTTGTGAACAAACAAGACAAACAAGACAAGAGCCC...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | CAAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTCTCTGTACACTCATaGGCTTTCTCCATCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVTTRHGKQLSTKIGIFFFSVHS*AFSILV Trigger: AACCAAGATGGAGAAAGCCAATGAGTGTACAGAGAA...AAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS GCA 90 bp | TGTCTTGTTTGTTCACAAGAATTACTTCCCTCTCCTCCATTGCATTaGATCTCCTCTGCTTGTTCATCATTCGTTTTGGATGCATTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLVCSQELLPSPPLH*ISSACSSFVLDAFR Trigger: CCTAAATGCATCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAGTAATTCTTGTGAACAAACAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGGCCTTCAGATGTGTTTaGCTGAATATCACTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKAFRCV*LNITFR Trigger: TCTGAAAGTGATATTCAGCAAAACACATCTGAAGGC...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTTGCATCTCCTCTGCTaGTTCATCATTCGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFLHLLC*FIIRFG Trigger: TCCAAAACGAATGATGAACAAGCAGAGGAGATGCAA...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTGGGCTCTTGTCTTGTTaGTCTTGTTTGTTCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFGLLSC*SCLFTR Trigger: TCTTGTGAACAAACAAGACAAACAAGACAAGAGCCC...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTTTCTTCTCTGCTTCTaGGGTTTTCTTGCAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFFLLCF*GFLAGM Trigger: CATTCCTGCAAGAAAACCCAAGAAGCAGAGAAGAAA...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGTGTTTGAATTTTTCCTaGTGTAACACTCCCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKCLNFS*CNTPFK Trigger: CTTGAAGGGAGTGTTACACAAGGAAAAATTCAAACA...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | GTCCTGGAAGCTTATGGTTTATTGTGGATTGTTCTCAGGAGAGTAAGAGACAAGCTTCACAGATATCCCTaGTTTGAATTTTTCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLEAYGLLWIVLRRVRDKLHRYP*FEFFLV Trigger: CACAAGGAAAAATTCAAACAAGGGATATCTGTGAAG...CTTGTCTCTTACTCTCCTGAGAACAATCCACAATAAACCATAAGCTTCCAGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS-3UTR CAA 90 bp | AAGTTACCACACGTCACGGGAAGCAACTCAGCACTAAAATTGGCATTTTCTTTTTGTTCATCATTCGTTTaGGATGCATTTAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLPHVTGSNSALKLAFSFCSSFV*DAFRKK Trigger: CTTCTTCCTAAATGCATCCAAAACGAATGATGAACA...AAAAGAAAATGCCAATTTTAGTGCTGAGTTGCTTCCCGTGACGTGTGGTAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162925.2 |
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| CDS CAA 90 bp | TCCAAGGGACCCAAAGGCAAGTGCAGAGAATCCAGGCAGAGCCGCTaGCTAAGGTGTGACACTGACAGCGAGGCAACACAGGGCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKGPKGKCRESRQSR*LRCDTDSEATQGFS Trigger: GCTGAAGCCCTGTGTTGCCTCGCTGTCAGTGTCACACCTTAGCAAGCGGCTCTGCCTGGATTCTCTGCACTTGCCTTTGGGTCCCTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113385.3 |
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| CDS TCA 72 bp | TGTGGGTTGCTGTGCTCCTGCTTCTTGTCTCAGGGATaGGGGCAGGTCATCCTGGGGCTCTTGTCTTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CGLLCSCFLSQG*GQVILGLLSCL Trigger: CAAACAAGACAAGAGCCCCAGGATGACCTGCCCTCATCCCTGAGACAAGAAGCAGGAGCACAGCAACCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS GCA 72 bp | GGTGCCCACACATTCTCCTTGGCTGCTTCCCATCCTTaGTTCCAGGTCTTCTGGCACATATGTTGGGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: GAHTFSLAASHP*FQVFWHICWGT Trigger: TGTTCCCCAACATATGTGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS GCA 72 bp | GAATGTTCCTCCTGGTGCCCACACATTCTCCTTGGCTaGTTCCCATCCTTGCTTCCAGGTCTTCTGGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: ECSSWCPHILLG*FPSLLPGLLAH Trigger: ATGTGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGCACCAGGAGGAACATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS CAA 72 bp | TGGTGCCCACACATTCTCCTTGGCTGCTTCCCATCCTaGCTTCCAGGTCTTCTGGCACATATGTTGGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: WCPHILLGCFPS*LPGLLAHMLGN Trigger: GTTCCCCAACATATGTGCCAGAAGACCTGGAAGCAAGGATGGGAAGCAGCCAAGGAGAATGTGTGGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS CCA 72 bp | TCTGCTTCTTGGGTTTTCTTGCAGGAATGTTCCTCCTaGTGCCCACACATTCTCCTTGGCTGCTTCCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SASWVFLQECSS*CPHILLGCFPS Trigger: GGATGGGAAGCAGCCAAGGAGAATGTGTGGGCACCAGGAGGAACATTCCTGCAAGAAAACCCAAGAAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS CCA 72 bp | CCTGCTTCTTGTCTCAGGGATGAGGGCAGGTCATCCTaGGGCTCTTGTCTTGTTTGTCTTGTTTGTTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: PASCLRDEGRSS*GSCLVCLVCSQ Trigger: TTGTGAACAAACAAGACAAACAAGACAAGAGCCCCAGGATGACCTGCCCTCATCCCTGAGACAAGAAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS CCA 72 bp | CGATGTATCCGTGGAGGATTGGGTAGAAAATTTCTCTaGATCAGGAGTTTCAGGGGCCAATTATGGCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RCIRGGLGRKFL*IRSFRGQLWQR Trigger: GCGCTGCCATAATTGGCCCCTGAAACTCCTGATCCAGAGAAATTTTCTACCCAATCCTCCACGGATACATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS CAA 90 bp | GTCCTTGAACGTGATTTTGTGATTCCGGAAGATGAGCCTCATGTCTaGCACAAAGTCTTCTACTTGGCAGTAAGCCTGGTCACTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLERDFVIPEDEPHV*HKVFYLAVSLVTQL Trigger: AAGCTGAGTGACCAGGCTTACTGCCAAGTAGAAGACTTTGTGCAAGACATGAGGCTCATCTTCCGGAATCACAAAATCACGTTCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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| CDS TCA 72 bp | CTTCCAGGTCTTCTGGCACATATGTTGGGGAACATATaGCACAGGAACACTTCTTTTCACGTGTGGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LPGLLAHMLGNI*HRNTSFHVWVA Trigger: AGCAACCCACACGTGAAAAGAAGTGTTCCTGTGTCATATGTTCCCCAACATATGTGCCAGAAGACCTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS CAA 72 bp | CGTGATTTTGTGATTCCGGAAGATGAGCCTCATGTCTaGCACAAAGTCTTCTACTTGGCAGTAAGCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RDFVIPEDEPHV*HKVFYLAVSLV Trigger: GACCAGGCTTACTGCCAAGTAGAAGACTTTGTGCAAGACATGAGGCTCATCTTCCGGAATCACAAAATCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS CCA 72 bp | AAATTTCTCTGGATCAGGAGTTTCAGGGGCCAATTATaGCAGCGCAGGCTCAGTTTCCAGTTCTTTGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: KFLWIRSFRGQL*QRRLSFQFFDF Trigger: AAAGTCAAAGAACTGGAAACTGAGCCTGCGCTGCCATAATTGGCCCCTGAAACTCCTGATCCAGAGAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000161497.2 |
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| CDS CAA 72 bp | GAAGATGAGCCTCATGTCTTGCACAAAGTCTTCTACTaGGCAGTAAGCCTGGTCACTCAGCTTTTTCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: EDEPHVLHKVFY*AVSLVTQLFLD Trigger: ATCAAGAAAAAGCTGAGTGACCAGGCTTACTGCCAAGTAGAAGACTTTGTGCAAGACATGAGGCTCATCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS GCA 72 bp | TGTTCACAAGAATTACTTCCCTCTCCTCCATTGCATTaGATCTCCTCTGCTTGTTCATCATTCGTTTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CSQELLPSPPLH*ISSACSSFVLD Trigger: ATCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAGTAATTCTTGTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS CAA 72 bp | TTGTTCACAAGAATTACTTCCCTCTCCTCCATTGCATaGCATCTCCTCTGCTTGTTCATCATTCGTTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFTRITSLSSIA*HLLCLFIIRFG Trigger: TCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAGTAATTCTTGTGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS CAA 72 bp | CTTGTTTGTTCACAAGAATTACTTCCCTCTCCTCCATaGCATTGCATCTCCTCTGCTTGTTCATCATTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LVCSQELLPSPP*HCISSACSSFV Trigger: AACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAGTAATTCTTGTGAACAAACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
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| CDS CAA 72 bp | ATGGACTTCACAGATATCCCTTGTTTGAATTTTTCCTaGTGTAACACTCCCTTCAAGTTACCACACGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: MDFTDIPCLNFS*CNTPFKLPHVT Trigger: CGTGACGTGTGGTAACTTGAAGGGAGTGTTACACAAGGAAAAATTCAAACAAGGGATATCTGTGAAGTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
||
| CDS CAA 90 bp | TCTCCTCCATTGCATTGCATCTCCTCTGCTTGTTCATCATTCGTTTaGGATGCATTTAGGAAGAAGTGTTTTAGAGTCTCCTTTAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPPLHCISSACSSFV*DAFRKKCFRVSFKS Trigger: CGACTTAAAGGAGACTCTAAAACACTTCTTCCTAAATGCATCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS CAA 90 bp | CTTGTTTGTCTTGTTTGTTCACAAGAATTACTTCCCTCTCCTCCATaGCATTGCATCTCCTCTGCTTGTTCATCATTCGTTTTGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVCLVCSQELLPSPP*HCISSACSSFVLDA Trigger: TGCATCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAGTAATTCTTGTGAACAAACAAGACAAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS GCA 72 bp | TTGTTTGTTCACAAGAATTACTTCCCTCTCCTCCATTaGATTGCATCTCCTCTGCTTGTTCATCATTCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LFVHKNYFPLLH*IASPLLVHHSF Trigger: AAACGAATGATGAACAAGCAGAGGAGATGCAATGCAATGGAGGAGAGGGAAGTAATTCTTGTGAACAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS CCA 72 bp | TGCATTGCATCTCCTCTGCTTGTTCATCATTCGTTTTaGATGCATTTAGGAAGAAGTGTTTTAGAGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CIASPLLVHHSF*MHLGRSVLESP Trigger: AGGAGACTCTAAAACACTTCTTCCTAAATGCATCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS CAA 72 bp | TTGCATTGCATCTCCTCTGCTTGTTCATCATTCGTTTaGGATGCATTTAGGAAGAAGTGTTTTAGAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHCISSACSSFV*DAFRKKCFRVS Trigger: GGAGACTCTAAAACACTTCTTCCTAAATGCATCCAAAACGAATGATGAACAAGCAGAGGAGATGCAATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080204.11 ENSMUST00000162925.2 |
||
| CDS TCA 72 bp | TCTGACACTGTATGGACTTCACAGATATCCCTTGTTTaGATTTTTCCTTGTGTAACACTCCCTTCAAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SDTVWTSQISLV*IFPCVTLPSSY Trigger: GTAACTTGAAGGGAGTGTTACACAAGGAAAAATTCAAACAAGGGATATCTGTGAAGTCCATACAGTGTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080204.11 |
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