Pregenerated sensors for SP110 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070034Ensembl transcript IDs: ENSMUST00000093508.7
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTCAGAGCTaGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: WVSCDEDHNYEGPQS*DTQRLKGKVQTHTH Trigger: GTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| 3UTR GCA 90 bp | GAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTaGCATTGTAAGTCAGCTGTGAACAAGGACATCGTGAGCGTGTAC | + |
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Preference number: 1 (lower is better) Translates to: ETPTALFLLSSIHAL*HCKSAVNKDIVSVY Trigger: GTACACGCTCACGATGTCCTTGTTCACAGCTGACTTACAATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCAAACGCACAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGAGACAGAGACAGAGTaGGAGCGAGCACAGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VFKRTETPTALFLLSSIHETETE*ERAQEL Trigger: CAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTC...ATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTGTGCGTTTGAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| 3UTR GCA 72 bp | AGAGAGACAGAGAGAGACAGAGAGACAGAGACAGAGTaGGAGCGAGCACAGGAGCTGAGCACATATCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RETERDRETETE*ERAQELSTYQV Trigger: GACCTGATATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCTGTCTCTCTCTGTCTCTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| 3UTR GCA 72 bp | AGCTGTGAACAAGGACATCGTGAGCGTGTACCACAGTaGTGGGTCAGTTGTGATGAGGACCACAACTACGAA | + |
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Preference number: 3 (lower is better) Translates to: SCEQGHRERVPQ*WVSCDEDHNYE Trigger: TTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTACACGCTCACGATGTCCTTGTTCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| 3UTR CCA 72 bp | TGTGATGAGGACCACAACTACGAAGGACCTCAGAGCTaGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACA | + |
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Preference number: 3 (lower is better) Translates to: CDEDHNYEGPQS*DTQRLKGKVQT Trigger: TGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAGTTGTGGTCCTCATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| 3UTR GCA 72 bp | ACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTaGCATTGTAAGTCAGCTGTGAACAAGGACATCGTG | + |
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Preference number: 3 (lower is better) Translates to: TALFLLSSIHAL*HCKSAVNKDIV Trigger: CACGATGTCCTTGTTCACAGCTGACTTACAATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | AGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATCAGGTCGGAGCACCCTTCTGCTaGGTTGGCCAGGTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: RETETECERAQELSTYQVGAPFC*VGQVFK Trigger: CTTGAAGACCTGGCCAACCCAGCAGAAGGGTGCTCC...GACCTGATATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | AGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATCAGGTCTATCTGGGGTCGGGGTaGTGGCAGCAGTGTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RETETECERAQELSTYQVYLGSG*WQQCLK Trigger: CTTCAGACACTGCTGCCACCACCCCGACCCCAGATA...GACCTGATATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | GAGAGACAGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATAAACTCCATGTCCAGGTaGGGCCACTCCCATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: ERQRDRDRVRASTGAEHINSMSR*GHSHHL Trigger: GAGATGATGGGAGTGGCCTCACCTGGACATGGAGTT...TATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCTGTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | CACAACTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAACGTCAGCAGCACTaGCGGGTGGAAAGTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: HNYEGPQSWDTQRLKGKVQRQQH*RVESLL Trigger: GAGCAGACTTTCCACCCGTCAGTGCTGCTGACGTTG...AACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR GCA 90 bp | GAGAGACAGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATACTCAATGATTGGCTGTaGGGTTGCTCTGGGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: ERQRDRDRVRASTGAEHILNDWL*GCSGVT Trigger: TGTGACCCCAGAGCAACCGCACAGCCAATCATTGAG...TATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCTGTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTCAGAGCAGCACTGACGGGTaGAAAGTCTGCTCCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: VPQCWVSCDEDHNYEGPQSSTDG*KVCSRL Trigger: CAGTCTGGAGCAGACTTTCCACCCGTCAGTGCTGCT...CTGAGGTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | CTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACCATCCAGGATCTCAATaGTTGGCTGTGCGGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LRRTSELGHSEAQRQSSDHPGSQ*LAVRLL Trigger: GAGCAACCGCACAGCCAATCATTGAGATCCTGGATG...GTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | GTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTCAGGCCTTGAGCTTCTCTTaGACTCCATGTCCAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VPQCWVSCDEDHNYEGPQALSFS*TPCPGE Trigger: CTCACCTGGACATGGAGTTCAAGAGAAGCTCAAGGC...CTGAGGTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR GCA 90 bp | CGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACAGGAGAAGGACTGGGCTaGTCATCCAGGATCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: RRTSELGHSEAQRQSSDTGEGLG*SSRISM Trigger: CATTGAGATCCTGGATGAGCAGCCCAGTCCTTCTCC...TGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR GCA 90 bp | GTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTCAGTGGTTCTTCGTGCTGTaGTGGGCCTCTTTCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: VPQCWVSCDEDHNYEGPQWFFVL*WASFYH Trigger: GTGGTAGAAAGAGGCCCAGCACAGCACGAAGAACCA...CTGAGGTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACCAGGATCTCAATGATTaGCTGTGCGGTTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DLRAGTLRGSKAKFRHTHQDLND*LCGCSG Trigger: CCCAGAGCAACCGCACAGCCAATCATTGAGATCCTG...GTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GAGAGACAGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATGCAGGGTACTTCCCTaGCCATTTCCAGGTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: ERQRDRDRVRASTGAEHICRVLP*PFPGHL Trigger: CAAATGACCTGGAAATGGCCAGGGAAGTACCCTGCA...TATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCTGTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GAGAGACAGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATCTCTGGAACTTGTGTaGTTCTTCGTGCTGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ERQRDRDRVRASTGAEHISLELV*FFVLCW Trigger: CCAGCACAGCACGAAGAACCACACAAGTTCCAGAGA...TATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCTGTCTCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | CTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACGTGGTTTTTCCTTCCTaGATGCAGCCAAGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LGHSEAQRQSSDTHTHTHVVFPS*MQPRRG Trigger: GCCTCTCCTTGGCTGCATTCAGGAAGGAAAAACCAC...GTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | CTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACAGGTCACAGGGAGTGTaGGAGAGAAATCCACAGCGT | + |
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Preference number: 4 (lower is better) Translates to: LGHSEAQRQSSDTHTHTHRSQGV*ERNPQR Trigger: ACGCTGTGGATTTCTCTCCCACACTCCCTGTGACCT...GTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | AGCGTGTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACGGAACAAAGTCCCTTTaGCCTTACCACAGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SVYHSAGSVVMRTTTTKDGTKSL*PYHRSQ Trigger: CTGTGACCTGTGGTAAGGCCAAAGGGACTTTGTTCC...GTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTACACGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | CACAACTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTAGGGGAATGGCTTGTTaGTGGCATAGGCGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: HNYEGPQSWDTQRLKGKVRGMAC*WHRRCS Trigger: TGAACATCGCCTATGCCATCAACAAGCCATTCCCCT...AACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | ACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATCAGGTCAGGAGTTCATCTTCTGCTCCAGACTGGTaGGAATATTGTGCACCACTT | + |
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Preference number: 4 (lower is better) Translates to: TECERAQELSTYQVRSSSSAPDW*EYCAPL Trigger: AAGTGGTGCACAATATTCTCACCAGTCTGGAGCAGA...AGATGAACTCCTGACCTGATATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | CTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACTCCTGCTCACTGCCTTaGGCTTCTCTTGAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LGHSEAQRQSSDTHTHTHSCSLP*ASLELH Trigger: ATGGAGTTCAAGAGAAGCTCAAGGCAGTGAGCAGGA...GTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | CTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACTTCGAAGAAGGGGAATaGCTTGTTGATGGCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRRTSELGHSEAQRQSSDFEEGE*LVDGIG Trigger: GCCTATGCCATCAACAAGCCATTCCCCTTCTTCGAA...GTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACTTCAAGCAGGGTCAGTaGGGGTCTGTTTTTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: DLRAGTLRGSKAKFRHTHFKQGQ*GSVFLF Trigger: GAAGAGAAAAACAGACCCCCACTGACCCTGCTTGAA...GTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | TCAAAGGCAAAGTTCAGACACACACACACACACACACACACACACACACACACAACCCTTCTGCTGGGTTaGCCAGGTCTTCAAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SKAKFRHTHTHTHTHTHTTLLLG*PGLQAG Trigger: CCCTGCTTGAAGACCTGGCCAACCCAGCAGAAGGGT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | CGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACATTCTCTGGTGATCTCTaGAGGACACTGGAGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RRTSELGHSEAQRQSSDTFSGDL*RTLEWF Trigger: AAACCACTCCAGTGTCCTCCAGAGATCACCAGAGAA...TGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | GACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACTTATCTTTTCTCTGGTaGTCTCTGGAGGACACTGGA | + |
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Preference number: 4 (lower is better) Translates to: DLRAGTLRGSKAKFRHTHLSFLW*SLEDTG Trigger: TCCAGTGTCCTCCAGAGATCACCAGAGAAAAGATAA...GTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR GCA 90 bp | GGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACACCTGGTGAGAATATTGTaGACCACTTTGGACAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GTLRGSKAKFRHTHTHTHLVRIL*TTLDRG Trigger: CCCTCTGTCCAAAGTGGTGCACAATATTCTCACCAG...GTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | CACAACTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTTGGAGGACACTGGAGTaGTTTTTCCTTCCTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: HNYEGPQSWDTQRLKGKVWRTLE*FFLPEC Trigger: GCATTCAGGAAGGAAAAACCACTCCAGTGTCCTCCA...AACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAGTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | CACAACTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTATCTCTGGAGGACACTaGAGTGGTTTTTCCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HNYEGPQSWDTQRLKGKVISGGH*SGFSFL Trigger: CAGGAAGGAAAAACCACTCCAGTGTCCTCCAGAGAT...AACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAGTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | ACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATCAGGTCAGGAGTTCATCTCAGGTCATTTGCTGCTaGAGAGTCATCTTTTACCAC | + |
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Preference number: 4 (lower is better) Translates to: TECERAQELSTYQVRSSSQVICC*RVIFYH Trigger: GTGGTAAAAGATGACTCTCCAGCAGCAAATGACCTG...AGATGAACTCCTGACCTGATATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACTGCTTCAGTTTCTCTTaGAACAAAGTCCCTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: DLRAGTLRGSKAKFRHTHCFSFS*NKVPLA Trigger: GGCCAAAGGGACTTTGTTCCAAGAGAAACTGAAGCA...GTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | GTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTCAGTCTACCACTTGTTTTTaGTGCCTCTTTGCTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: VPQCWVSCDEDHNYEGPQSTTCF*CLFADL Trigger: GAGATCAGCAAAGAGGCATCAAAAACAAGTGGTAGA...CTGAGGTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | GTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTCAGAAAATTCCTTTACAGTaGGCCAATCTCCTGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VPQCWVSCDEDHNYEGPQKIPLQ*ANLLPH Trigger: ATGAGGCAGGAGATTGGCTCACTGTAAAGGAATTTT...CTGAGGTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACACTCTGCCGTCTTCTTTTaGAATTTGACCAGTTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: GTLRGSKAKFRHTHTHTHSAVFF*NLTSSD Trigger: GTCCGAACTGGTCAAATTCCAAAAGAAGACGGCAGA...GTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | CTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACATTCTTGGTCTTCTCTaGAACTTGTGTGGTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LRRTSELGHSEAQRQSSDILGLL*NLCGSS Trigger: CGAAGAACCACACAAGTTCCAGAGAAGACCAAGAAT...GTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | GGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACACTCACCTTCATGTATATaGAATGCTGGAGAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GTLRGSKAKFRHTHTHTHSPSCI*NAGEEP Trigger: AGGCTCTTCTCCAGCATTTCATATACATGAAGGTGA...GTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR GCA 90 bp | GAGAGACAGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATTCATGTATATGAAATaGTGGAGAAGAGCCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ERQRDRDRVRASTGAEHIFMYMK*WRRAFS Trigger: GGAAAAGGCTCTTCTCCAGCATTTCATATACATGAA...TATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCTGTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCAAAGTTCAGACACACACACACACACACACACACACACACACACACAAGTCCTCCTGCTCACTaGCTTGAGCTTCTCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SKAKFRHTHTHTHTHTHTSPPAH*LELLLN Trigger: GTTCAAGAGAAGCTCAAGGCAGTGAGCAGGAGGACT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | TCAAAGGCAAAGTTCAGACACACACACACACACACACACACACACACACACACATTTGCTGATCTCTTGTaGATTGGATGTCTGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: SKAKFRHTHTHTHTHTHTFADLL*IGCLGT Trigger: CGTGCCCAGACATCCAATTCACAAGAGATCAGCAAA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR GCA 90 bp | GTTTTCAAACGCACAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGATTGGCTGTGCGGTTaGTCTGGGGTCACAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: VFKRTETPTALFLLSSIHDWLCG*SGVTDS Trigger: AGAGTCTGTGACCCCAGAGCAACCGCACAGCCAATC...ATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTGTGCGTTTGAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR TCA 90 bp | GTTTTCAAACGCACAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATAGAGGGACCAGATTTTaGCAGGCTTCCAGAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: VFKRTETPTALFLLSSIHRGTRF*QASRDS Trigger: GGAATCTCTGGAAGCCTGTCAAAATCTGGTCCCTCT...ATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTGTGCGTTTGAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS-3UTR CCA 90 bp | GAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTGCCATTGTTTGTTCTCTGTGTCTTaGTCACCTCCTTCACGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ETPTALFLLSSIHALCHCLFSVS*SPPSRS Trigger: CGAACGTGAAGGAGGTGACCAAGACACAGAGAACAA...ACAATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTCAAACGCACAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATCCACAGCGTCATTCTTaGTCTTCTCTGGAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFKRTETPTALFLLSSIHPQRHS*SSLELV Trigger: CACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGG...ATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTGTGCGTTTGAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTGCCATTCATTTCCAGGTCATTTaGTGCTGGAGAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRHQQLYFYCLVFMHFAIHFQVI*CWRVIF Trigger: AAAGATGACTCTCCAGCAGCAAATGACCTGGAAATG...AATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR GCA 90 bp | GAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTGCCATTGTAACAAAAGTCCTTTCTaGTCCAGATGTCTTAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETPTALFLLSSIHALCHCNKSPF*SRCLNV Trigger: GACATTAAGACATCTGGAGCAGAAAGGACTTTTGTT...ACAATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTGCCATTATGTATATGAAATGCTaGAGAAGAGCCTTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRHQQLYFYCLVFMHFAIMYMKC*RRAFSK Trigger: CTTGGAAAAGGCTCTTCTCCAGCATTTCATATACAT...AATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | GGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACACCACCCTTCTGCTGGGTaGGCCAGGTCTTCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTLRGSKAKFRHTHTHTHHPSAG*ARSSSR Trigger: CCTGCTTGAAGACCTGGCCAACCCAGCAGAAGGGTG...GTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | AGAGAGACAGAGACAGAGTGCGAGCGAGCACAGGAGCTGAGCACATATCAGGTCCTGAGGACAGATGACTaGGCAGCGATATCTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RETETECERAQELSTYQVLRTDD*AAISGV Trigger: GACCCCAGATATCGCTGCCAAGTCATCTGTCCTCAG...GACCTGATATGTGCTCAGCTCCTGTGCTCGCTCGCACTCTGTCTCTGTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | GACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACCGCCCTTCCAGTCTTTaGATGTGGCCCTTCCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLRAGTLRGSKAKFRHTHRPSSL*MWPFPL Trigger: AAGGGGGAAGGGCCACATCAAAAGACTGGAAGGGCG...GTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 90 bp | TCCCGGAGGTTGACCTTGCTGAACAACGTCAGCAGCACTGACGGGTaGAAAGTCTGCTCCAGACTGGTGAGAATATTGTGCACCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRLTLLNNVSSTDG*KVCSRLVRILCTTL Trigger: CAAAGTGGTGCACAATATTCTCACCAGTCTGGAGCAGACTTTCCACCCGTCAGTGCTGCTGACGTTGTTCAGCAAGGTCAACCTCCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | CTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACGGGCACGCCTCATCCTaGTTCTCTGTGTCTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGHSEAQRQSSDTHTHTHGHASS*FSVSWS Trigger: TGACCAAGACACAGAGAACAAGGATGAGGCGTGCCC...GTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 90 bp | AGGGAGTGTGGGAGAGAAATCCACAGCGTCATTCTTGGTCTTCTCTaGAACTTGTGTGGTTCTTCGTGCTGTGCTGGGCCTCTTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: RECGREIHSVILGLL*NLCGSSCCAGPLST Trigger: GGTAGAAAGAGGCCCAGCACAGCACGAAGAACCACACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGGATTTCTCTCCCACACTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 90 bp | AGTCTTCCTTATCTTTTCTCTGGTGATCTCTGGAGGACACTGGAGTaGTTTTTCCTTCCTGAATGCAGCCAAGGAGAGGCACAGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLPYLFSGDLWRTLE*FFLPECSQGEAQLG Trigger: CCCGAGCTGTGCCTCTCCTTGGCTGCATTCAGGAAGGAAAAACCACTCCAGTGTCCTCCAGAGATCACCAGAGAAAAGATAAGGAAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | GGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACACCTTGTTCTCTGTGTCTaGGTCACCTCCTTCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLRGSKAKFRHTHTHTHLVLCV*VTSFTF Trigger: GAACGTGAAGGAGGTGACCAAGACACAGAGAACAAG...GTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | ACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACAGGTCTTCTCTGGAACTaGTGTGGTTCTTCGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSELGHSEAQRQSSDTHTGLLWN*CGSSCC Trigger: ACAGCACGAAGAACCACACAAGTTCCAGAGAAGACC...TGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | AGCGTGTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACTCCACAGCGTCATTCTaGGTCTTCTCTGGAACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVYHSAGSVVMRTTTTKDSTASF*VFSGTC Trigger: ACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGGA...GTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTACACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | AGCGTGTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTAGGCACCCTTCTTTaGAGGTTTACTCTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVYHSAGSVVMRTTTTKDLGTLL*RFTLGG Trigger: ACCTCCAAGAGTAAACCTCAAAAGAAGGGTGCCTAG...GTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTACACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | GTACCACAGTGCTGGGTCAGTTGTGATGAGGACCACAACTACGAAGGACCTCAGTTCTTGCTTTCTTGTTaGCAGGTGTGCAGGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VPQCWVSCDEDHNYEGPQFLLSC*QVCRVL Trigger: AAGTACCCTGCACACCTGCAAACAAGAAAGCAAGAA...CTGAGGTCCTTCGTAGTTGTGGTCCTCATCACAACTGACCCAGCACTGTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS TCA 90 bp | CATCCTTGTTCTCTGTGTCTTGGTCACCTCCTTCACGTTCGTAGATaGGTCATCTTTCCACAAAGTCCTCCTGCTCACTGCCTTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HPCSLCLGHLLHVRR*VIFPQSPPAHCLEL Trigger: AAGCTCAAGGCAGTGAGCAGGAGGACTTTGTGGAAAGATGACTCATCTACGAACGTGAAGGAGGTGACCAAGACACAGAGAACAAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | GGGACACTCAGAGGCTCAAAGGCAAAGTTCAGACACACACACACACACACACACTTTCTTCTTGCTTTCTaGTTTGCAGGTGTGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTLRGSKAKFRHTHTHTHFLLAF*FAGVQG Trigger: ACCCTGCACACCTGCAAACAAGAAAGCAAGAAGAAA...GTGTGTGTGTGTGTGTGTGTGTCTGAACTTTGCCTTTGAGCCTCTGAGTGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | CACAACTACGAAGGACCTCAGAGCTGGGACACTCAGAGGCTCAAAGGCAAAGTTTTGCTTCAGTTTCTCTaGGAACAAAGTCCCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNYEGPQSWDTQRLKGKVLLQFL*EQSPFG Trigger: GCCAAAGGGACTTTGTTCCAAGAGAAACTGAAGCAA...AACTTTGCCTTTGAGCCTCTGAGTGTCCCAGCTCTGAGGTCCTTCGTAGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 90 bp | CTTGTTTTTGATGCCTCTTTGCTGATCTCTTGTGAATTGGATGTCTaGGCACGCCTCATCCTTGTTCTCTGTGTCTTGGTCACCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVFDASLLISCELDV*ARLILVLCVLVTSF Trigger: GAAGGAGGTGACCAAGACACAGAGAACAAGGATGAGGCGTGCCCAGACATCCAATTCACAAGAGATCAGCAAAGAGGCATCAAAAACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 90 bp | GAGAGAAATCCACAGCGTCATTCTTGGTCTTCTCTGGAACTTGTGTaGTTCTTCGTGCTGTGCTGGGCCTCTTTCTACCACTTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ERNPQRHSWSSLELV*FFVLCWASFYHLFL Trigger: CAAAAACAAGTGGTAGAAAGAGGCCCAGCACAGCACGAAGAACCACACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGGATTTCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS GCA 90 bp | TTTCTCTTCGTAGGTATAACCAACGTTTCTGAAGCTTCTGAAAATTaGCACCAGGCTGGGGTATTCCCGGAGGTTGACCTTGCTGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: FLFVGITNVSEASEN*HQAGVFPEVDLAEQ Trigger: TTGTTCAGCAAGGTCAACCTCCGGGAATACCCCAGCCTGGTGGCAATTTTCAGAAGCTTCAGAAACGTTGGTTATACCTACGAAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS TCA 90 bp | CTGGTGAGAATATTGTGCACCACTTTGGACAGAGGGACCAGATTTTaGCAGGCTTCCAGAGATTCCTTGTACATTCTCTCAGTGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVRILCTTLDRGTRF*QASRDSLYILSVMK Trigger: CTTCATCACTGAGAGAATGTACAAGGAATCTCTGGAAGCCTGTCAAAATCTGGTCCCTCTGTCCAAAGTGGTGCACAATATTCTCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTGCCATTGCTTCCAGAGATTCCTaGTACATTCTCTCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRHQQLYFYCLVFMHFAIASRDS*YILSVM Trigger: CATCACTGAGAGAATGTACAAGGAATCTCTGGAAGC...AATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | GAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATGCACTTTGCCATTGTGCCTCTTTCTACCACTaGTTTTTGATGCCTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ETPTALFLLSSIHALCHCASFYH*FLMPLC Trigger: GCAAAGAGGCATCAAAAACAAGTGGTAGAAAGAGGC...ACAATGGCAAAGTGCATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS-3UTR CAA 90 bp | GTTTTCAAACGCACAGAGACACCAACAGCTTTATTTTTACTGTCTAGTATTCATTCTGAATGCACTTTTTaGAGGCTCCTTGCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VFKRTETPTALFLLSSIHSECTF*RLLASV Trigger: AACTGAAGCAAGGAGCCTCAAAAAAGTGCATTCAGA...ATGAATACTAGACAGTAAAAATAAAGCTGTTGGTGTCTCTGTGCGTTTGAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS GCA 72 bp | GGGTGGTGGCAGCAGTGTCTGAAGGGAGCACCCTTCTaGTGGGTTGGCCAGGTCTTCAAGCAGGGTCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GWWQQCLKGAPF*WVGQVFKQGQW Trigger: CCACTGACCCTGCTTGAAGACCTGGCCAACCCAGCAGAAGGGTGCTCCCTTCAGACACTGCTGCCACCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 72 bp | CAGATGACTTGGCAGCGATATCTGGGGTCGGGGTGGTaGCAGCAGTGTCTGAAGGGAGCACCCTTCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QMTWQRYLGSGW*QQCLKGAPFCW Trigger: CCAGCAGAAGGGTGCTCCCTTCAGACACTGCTGCCACCACCCCGACCCCAGATATCGCTGCCAAGTCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS TCA 72 bp | CTGTGCGGTTGCTCTGGGGTCACAGACTCTCGGTGCTaGGGACAGATGACTTGGCAGCGATATCTGGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LCGCSGVTDSRC*GQMTWQRYLGS Trigger: CGACCCCAGATATCGCTGCCAAGTCATCTGTCCTCAGCACCGAGAGTCTGTGACCCCAGAGCAACCGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS TCA 72 bp | GGGGAGAAGGACTGGGCTGCTCATCCAGGATCTCAATaGTTGGCTGTGCGGTTGCTCTGGGGTCACAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: GEKDWAAHPGSQ*LAVRLLWGHRL Trigger: GAGTCTGTGACCCCAGAGCAACCGCACAGCCAATCATTGAGATCCTGGATGAGCAGCCCAGTCCTTCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 72 bp | ATTGCCACCAGGCTGGGGTATTCCCGGAGGTTGACCTaGCTGAACAACGTCAGCAGCACTGACGGGTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: IATRLGYSRRLT*LNNVSSTDGWK Trigger: TTTCCACCCGTCAGTGCTGCTGACGTTGTTCAGCAAGGTCAACCTCCGGGAATACCCCAGCCTGGTGGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 72 bp | CTGAAAATTGCCACCAGGCTGGGGTATTCCCGGAGGTaGACCTTGCTGAACAACGTCAGCAGCACTGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: LKIATRLGYSRR*TLLNNVSSTDG Trigger: CCCGTCAGTGCTGCTGACGTTGTTCAGCAAGGTCAACCTCCGGGAATACCCCAGCCTGGTGGCAATTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS TCA 72 bp | CCGGAGGTTGACCTTGCTGAACAACGTCAGCAGCACTaGCGGGTGGAAAGTCTGCTCCAGACTGGTGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PEVDLAEQRQQH*RVESLLQTGEN Trigger: ATTCTCACCAGTCTGGAGCAGACTTTCCACCCGTCAGTGCTGCTGACGTTGTTCAGCAAGGTCAACCTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 90 bp | CTGAAGCTTCTGAAAATTGCCACCAGGCTGGGGTATTCCCGGAGGTaGACCTTGCTGAACAACGTCAGCAGCACTGACGGGTGGAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LKLLKIATRLGYSRR*TLLNNVSSTDGWKV Trigger: GACTTTCCACCCGTCAGTGCTGCTGACGTTGTTCAGCAAGGTCAACCTCCGGGAATACCCCAGCCTGGTGGCAATTTTCAGAAGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS TCA 72 bp | CACTGCCTTGAGCTTCTCTTGAACTCCATGTCCAGGTaGGGCCACTCCCATCATCTCATCTTGACGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HCLELLLNSMSR*GHSHHLILTGL Trigger: AAGCCCCGTCAAGATGAGATGATGGGAGTGGCCTCACCTGGACATGGAGTTCAAGAGAAGCTCAAGGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 72 bp | CCACAGCGTCATTCTTGGTCTTCTCTGGAACTTGTGTaGTTCTTCGTGCTGTGCTGGGCCTCTTTCTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: PQRHSWSSLELV*FFVLCWASFYH Trigger: GTGGTAGAAAGAGGCCCAGCACAGCACGAAGAACCACACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 72 bp | GGGAGAGAAATCCACAGCGTCATTCTTGGTCTTCTCTaGAACTTGTGTGGTTCTTCGTGCTGTGCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GREIHSVILGLL*NLCGSSCCAGP Trigger: AGGCCCAGCACAGCACGAAGAACCACACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGGATTTCTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 72 bp | GTGTGCAGGGTACTTCCCTGGCCATTTCCAGGTCATTaGCTGCTGGAGAGTCATCTTTTACCACTGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VCRVLPWPFPGH*LLESHLLPLTR Trigger: CCGAGTCAGTGGTAAAAGATGACTCTCCAGCAGCAAATGACCTGGAAATGGCCAGGGAAGTACCCTGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 72 bp | TTGACCTTGCTGAACAACGTCAGCAGCACTGACGGGTaGAAAGTCTGCTCCAGACTGGTGAGAATATTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTLLNNVSSTDG*KVCSRLVRILC Trigger: GCACAATATTCTCACCAGTCTGGAGCAGACTTTCCACCCGTCAGTGCTGCTGACGTTGTTCAGCAAGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 72 bp | TTCTGCTGGGTTGGCCAGGTCTTCAAGCAGGGTCAGTaGGGGTCTGTTTTTCTCTTCGTAGGTATAACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: FCWVGQVFKQGQ*GSVFLFVGITN Trigger: GTTGGTTATACCTACGAAGAGAAAAACAGACCCCCACTGACCCTGCTTGAAGACCTGGCCAACCCAGCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 72 bp | GATGTCTGGGCACGCCTCATCCTTGTTCTCTGTGTCTaGGTCACCTCCTTCACGTTCGTAGATGAGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: DVWARLILVLCV*VTSFTFVDESS Trigger: AGATGACTCATCTACGAACGTGAAGGAGGTGACCAAGACACAGAGAACAAGGATGAGGCGTGCCCAGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 72 bp | TCTCTTGTGAATTGGATGTCTGGGCACGCCTCATCCTaGTTCTCTGTGTCTTGGTCACCTCCTTCACGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLVNWMSGHASS*FSVSWSPPSRS Trigger: CGAACGTGAAGGAGGTGACCAAGACACAGAGAACAAGGATGAGGCGTGCCCAGACATCCAATTCACAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 90 bp | TGTGGGAGAGAAATCCACAGCGTCATTCTTGGTCTTCTCTGGAACTaGTGTGGTTCTTCGTGCTGTGCTGGGCCTCTTTCTACCACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGREIHSVILGLLWN*CGSSCCAGPLSTTC Trigger: ACAAGTGGTAGAAAGAGGCCCAGCACAGCACGAAGAACCACACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGGATTTCTCTCCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS TCA 72 bp | TCTCTGTGTCTTGGTCACCTCCTTCACGTTCGTAGATaGGTCATCTTTCCACAAAGTCCTCCTGCTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLCLGHLLHVRR*VIFPQSPPAHC Trigger: GCAGTGAGCAGGAGGACTTTGTGGAAAGATGACTCATCTACGAACGTGAAGGAGGTGACCAAGACACAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 72 bp | TTGCTTTCTTGTTTGCAGGTGTGCAGGGTACTTCCCTaGCCATTTCCAGGTCATTTGCTGCTGGAGAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLSCLQVCRVLP*PFPGHLLLESH Trigger: ATGACTCTCCAGCAGCAAATGACCTGGAAATGGCCAGGGAAGTACCCTGCACACCTGCAAACAAGAAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CCA 72 bp | GATGCCTCTTTGCTGATCTCTTGTGAATTGGATGTCTaGGCACGCCTCATCCTTGTTCTCTGTGTCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DASLLISCELDV*ARLILVLCVLV Trigger: GACCAAGACACAGAGAACAAGGATGAGGCGTGCCCAGACATCCAATTCACAAGAGATCAGCAAAGAGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
||
| CDS CAA 72 bp | GAAATCCACAGCGTCATTCTTGGTCTTCTCTGGAACTaGTGTGGTTCTTCGTGCTGTGCTGGGCCTCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EIHSVILGLLWN*CGSSCCAGPLS Trigger: AGAAAGAGGCCCAGCACAGCACGAAGAACCACACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGGATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS CAA 72 bp | ACAGGGAGTGTGGGAGAGAAATCCACAGCGTCATTCTaGGTCTTCTCTGGAACTTGTGTGGTTCTTCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TGSVGEKSTASF*VFSGTCVVLRA Trigger: AGCACGAAGAACCACACAAGTTCCAGAGAAGACCAAGAATGACGCTGTGGATTTCTCTCCCACACTCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS GCA 72 bp | GTAGGTATAACCAACGTTTCTGAAGCTTCTGAAAATTaGCACCAGGCTGGGGTATTCCCGGAGGTTGACCTT | + |
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Preference number: 6 (lower is better) Translates to: VGITNVSEASEN*HQAGVFPEVDL Trigger: AAGGTCAACCTCCGGGAATACCCCAGCCTGGTGGCAATTTTCAGAAGCTTCAGAAACGTTGGTTATACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS CCA 72 bp | TATCTTTTCTCTGGTGATCTCTGGAGGACACTGGAGTaGTTTTTCCTTCCTGAATGCAGCCAAGGAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: YLFSGDLWRTLE*FFLPECSQGEA Trigger: TGCCTCTCCTTGGCTGCATTCAGGAAGGAAAAACCACTCCAGTGTCCTCCAGAGATCACCAGAGAAAAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS CCA 72 bp | CTCGAGAGTCTTCCTTATCTTTTCTCTGGTGATCTCTaGAGGACACTGGAGTGGTTTTTCCTTCCTGAATGC | + |
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Preference number: 6 (lower is better) Translates to: LESLPYLFSGDL*RTLEWFFLPEC Trigger: GCATTCAGGAAGGAAAAACCACTCCAGTGTCCTCCAGAGATCACCAGAGAAAAGATAAGGAAGACTCTCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS CAA 90 bp | TTTCTACCACTTGTTTTTGATGCCTCTTTGCTGATCTCTTGTGAATaGGATGTCTGGGCACGCCTCATCCTTGTTCTCTGTGTCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FLPLVFDASLLISCE*DVWARLILVLCVLV Trigger: GACCAAGACACAGAGAACAAGGATGAGGCGTGCCCAGACATCCAATTCACAAGAGATCAGCAAAGAGGCATCAAAAACAAGTGGTAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS CAA 72 bp | CTTGTTTTTGATGCCTCTTTGCTGATCTCTTGTGAATaGGATGTCTGGGCACGCCTCATCCTTGTTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LVFDASLLISCE*DVWARLILVLC Trigger: ACAGAGAACAAGGATGAGGCGTGCCCAGACATCCAATTCACAAGAGATCAGCAAAGAGGCATCAAAAACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS TCA 72 bp | ATATTGTGCACCACTTTGGACAGAGGGACCAGATTTTaGCAGGCTTCCAGAGATTCCTTGTACATTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ILCTTLDRGTRF*QASRDSLYILS Trigger: TGAGAGAATGTACAAGGAATCTCTGGAAGCCTGTCAAAATCTGGTCCCTCTGTCCAAAGTGGTGCACAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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| CDS GCA 72 bp | GGTTTACTCTTGGAGGTAAAGAACAAAAGTCCTTTCTaGTCCAGATGTCTTAATGTCTCCCCGTTACAACGT | + |
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Preference number: 6 (lower is better) Translates to: GLLLEVKNKSPF*SRCLNVSPLQR Trigger: ACGTTGTAACGGGGAGACATTAAGACATCTGGAGCAGAAAGGACTTTTGTTCTTTACCTCCAAGAGTAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093508.7 |
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