Pregenerated sensors for SOX9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000567Ensembl transcript IDs: ENSMUST00000000579.3
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTaGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: LVGPSGQECCPSGHE*PGHLQYVVMSSDKV Trigger: GACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR CCA 90 bp | CACACGCACACATCCACATACAGTCCAGGCAGACCCAAAGGTCTATaGCTGAAAACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTG | + |
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Preference number: 1 (lower is better) Translates to: HTHTSTYSPGRPKGL*LKTLQRTQCSSLHL Trigger: CAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGTTTTCAGCCATAGACCTTTGGGTCTGCCTGGACTGTATGTGGATGTGTGCGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR GCA 90 bp | GGCAGACCCAAAGGTCTATGGCTGAAAACATTGCAAAGGACTCAGTaGTCCTCACTGCATCTGAAACCTCTCATTTGTCCACAAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: GRPKGLWLKTLQRTQ*SSLHLKPLICPQTE Trigger: CTCTGTTTGTGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGTTTTCAGCCATAGACCTTTGGGTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR CAA 90 bp | CTCTCTGCAGGAGAGCAGCCAAGGGGCTATCCACGGCACACACACTaGCAGAGGCATGTGTTGTCCCGTGTCACAACACACGCACACATC | + |
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Preference number: 2 (lower is better) Translates to: LSAGEQPRGYPRHTH*QRHVLSRVTTHAHI Trigger: GATGTGTGCGTGTGTTGTGACACGGGACAACACATGCCTCTGCAAGTGTGTGTGCCGTGGATAGCCCCTTGGCTGCTCTCCTGCAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR CAA 90 bp | TCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGGCCATTaGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAAAGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SGQECCPSGHEWPGH*QYVVMSSDKVLKSL Trigger: GAGAGACTTTAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR-3UTR CCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCACATCTGCTGGCCACATaGGGCCCAGGAGGCAACCAG | + |
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Preference number: 2 (lower is better) Translates to: TLQRTQCSSLHLKPLICPHLLAT*GPGGNQ Trigger: CTGGTTGCCTCCTGGGCCCCATGTGGCCAGCAGATG...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR-3UTR TCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCACCCTGGCTTTCCTTCTaGGGCTGCAGCCAGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TLQRTQCSSLHLKPLICPPWLSF*GCSQQA Trigger: TGCTTGCTGGCTGCAGCCTCAGAAGGAAAGCCAGGG...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR CAA 90 bp | TCCACATACAGTCCAGGCAGACCCAAAGGTCTATGGCTGAAAACATaGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATT | + |
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Preference number: 2 (lower is better) Translates to: STYSPGRPKGLWLKT*QRTQCSSLHLKPLI Trigger: AATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGTTTTCAGCCATAGACCTTTGGGTCTGCCTGGACTGTATGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR CAA 90 bp | ATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTaGTCCACAAACAGAGAGAGACAGGTTTCCAGTTTGTTATCAACA | + |
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Preference number: 2 (lower is better) Translates to: IAKDSVLLTASETSH*STNRERQVSSLLST Trigger: TGTTGATAACAAACTGGAAACCTGTCTCTCTCTGTTTGTGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR-3UTR CCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCATGTACAAAAATACTCTaGTTGCAAGGAAGGCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: TLQRTQCSSLHLKPLICPCTKIL*LQGRLR Trigger: CCTTAGCCTTCCTTGCAACCAGAGTATTTTTGTACA...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR GCA 72 bp | TCCTCGCTGATACTGGTGGGTCCATCTGGCCAGGAGTaGTGTCCGTCTGGCCACGAGTGGCCCGGCCATTTG | + |
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Preference number: 3 (lower is better) Translates to: SSLILVGPSGQE*CPSGHEWPGHL Trigger: CAAATGGCCGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTATCAGCGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR CCA 72 bp | CCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTaGCCCGGCCATTTGCAATATGTTGTCATGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: PSGQECCPSGHE*PGHLQYVVMSS Trigger: TGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR-3UTR CAA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTCCAAAGGAATTTCAATaGGTTCTTGATTTCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: PRVARPFAICCHELRQSLPKEFQ*VLDFFS Trigger: GCTGAAGAAATCAAGAACCAATTGAAATTCCTTTGG...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | TACTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGGGGGGTGCTTGCTGCTaGGGAGGCGCCTGTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: YWWVHLARSAVRLATSGPGGACC*GGACGA Trigger: AGCCCCACAGGCGCCTCCGCAGCAGCAAGCACCCCC...CGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTA 69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR TCA 90 bp | TACTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGCGTATTGCGAGCGGGTaGTGGGCGGGTAGGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: YWWVHLARSAVRLATSGPRIASG*WAGRRG Trigger: GCCCCTCCTACCCGCCCATCACCCGCTCGCAATACG...CGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | TACTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGGATCCGGCTCGCCCTTaGGGAAGGTGTTCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: YWWVHLARSAVRLATSGPDPARP*GRCSPG Trigger: CCCAGGAGAACACCTTCCCCAAGGGCGAGCCGGATC...CGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | TACTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGCCCCTGGGTGGCCGTTaGGTGGCAAGTATTGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: YWWVHLARSAVRLATSGPPLGGR*VASIGQ Trigger: TTGACCAATACTTGCCACCCAACGGCCACCCAGGGG...CGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACGGTGGAGTAGAGCCCTaGGCCCTGGCCGGCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNGGVEP*ALAGCV Trigger: CACGCAGCCGGCCAGGGCTCAGGGCTCTACTCCACC...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACTGCTCGCCCGGGGAGTaGACCTCACTCATGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNCSPGE*TSLMPE Trigger: CTCCGGCATGAGTGAGGTGCACTCCCCGGGCGAGCA...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTTGCTGCTGGGGTGCCTaGGGCTGCTGCGGGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLCCWGA*GCCGGA Trigger: AGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCA...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACGTGAGCGTGTGTGCCTaGTGCTGCTGGGGTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNVSVCA*CCWGAC Trigger: GCAGGCACCCCAGCAGCAGCAGGCACACACGCTCAC...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACCGTGGTGAGCGTGTGTaGCTGCTGCTGCTGGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNRGERV*LLLLGC Trigger: GCACCCCAGCAGCAGCAGGCACACACGCTCACCACG...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACGGTTGTTCCCAGTGCTaGGGGCTGTGGGTCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNGCSQC*GLWVCG Trigger: CCCGCAGACCCACAGCCCGCAGCACTGGGAACAACC...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTATGGGGTGCCTGCGGCTaGTGCGGGGGTGCTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HEWPGHLQYVVMSSDKVLWGACG*CGGACC Trigger: GCAGCAAGCACCCCCGCAGCAGCCGCAGGCACCCCA...TAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACTTTGGGAGTGGTGGGTaGGGTCGGCGGACCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNFGSGG*GRRTLR Trigger: TCTCAGGGTCCGCCGACCCCACCCACCACTCCCAAA...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTTGTGCCTGCTGCTGCTaGGGTGCCTGCGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLCACCC*GACGCC Trigger: GCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACA...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACTGTGGGTCTGCGGGATaGAAGGGACCCCGGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNCGSAG*KGPRRC Trigger: ACACCTCCGGGGTCCCTTCCATCCCGCAGACCCACA...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAGGAGGGGGCGGCGCCTaGTGCTTCGACATCCACACG | + |
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Preference number: 4 (lower is better) Translates to: HEWPGHLQYVVMSSDKVLGGGGA*CFDIHT Trigger: CGTGTGGATGTCGAAGCAGCAGGCGCCGCCCCCTCC...TAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | TCAGACAAAGTCTTAAAGTCTCTCTCCTGGAATCCCAGCAATCGTTACCTTCCTCGGCTGCTGCGGGGGTaGTTGCTGCTGCGGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SDKVLKSLSWNPSNRYLPRLLRG*LLLRRR Trigger: GCGCCTCCGCAGCAGCAAGCACCCCCGCAGCAGCCG...AGGAAGGTAACGATTGCTGGGATTCCAGGAGAGAGACTTTAAGACTTTGTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCACCGACATGGTGGGGCTaGGGGCGCCAGACAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TLQRTQCSSLHLKPLICPPTWWG*GRQTGP Trigger: AGGGCCTGTCTGGCGCCCCCAGCCCCACCATGTCGG...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAGTCCTCCGACATGGTaGGGCTGGGGGCGCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLSPPTW*GWGRQT Trigger: TGTCTGGCGCCCCCAGCCCCACCATGTCGGAGGACT...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTGCCGGAGGAGGAATGTaGGGAGTCGGCTTGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLAGGGM*GVGLQR Trigger: GCGCTGCAAGCCGACTCCCCACATTCCTCCTCCGGC...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTCGTCGGTTTTGGGAGTaGTGGGTGGGGTCGGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLRRFWE*WVGSAD Trigger: GTCCGCCGACCCCACCCACCACTCCCAAAACCGACG...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCAGGTGGCCGGAACCCCTaGGTGGCCGTTGGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: TLQRTQCSSLHLKPLICPGGRNP*VAVGWQ Trigger: TTGCCACCCAACGGCCACCCAGGGGTTCCGGCCACC...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTACGATGGGGGTGTACATaGGGCGCTGCGCGGGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: HEWPGHLQYVVMSSDKVLRWGCT*GAARGS Trigger: TGAACCCCGCGCAGCGCCCCATGTACACCCCCATCG...TAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | TCAGACAAAGTCTTAAAGTCTCTCTCCTGGAATCCCAGCAATCGTTACCTTCCTGGGGGCGGCGCCTGCTaGTTCGACATCCACACGTGG | + |
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Preference number: 4 (lower is better) Translates to: SDKVLKSLSWNPSNRYLPGGGAC*FDIHTW Trigger: CCACGTGTGGATGTCGAAGCAGCAGGCGCCGCCCCC...AGGAAGGTAACGATTGCTGGGATTCCAGGAGAGAGACTTTAAGACTTTGTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCACGGTTTTGGGAGTGGTaGGTGGGGTCGGCGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: TLQRTQCSSLHLKPLICPRFWEW*VGSADP Trigger: AGGGTCCGCCGACCCCACCCACCACTCCCAAAACCG...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTCTTGCACGTCGGTTTTaGGAGTGGTGGGTGGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLLARRF*EWWVGS Trigger: CGACCCCACCCACCACTCCCAAAACCGACGTGCAAG...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACCGTCGGTCATCTTCATaGAGGGGTCCAGGAGATTCA | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNRRSSS*RGPGDS Trigger: TGAATCTCCTGGACCCCTTCATGAAGATGACCGACG...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTATTGATGTGCGTTCGCTaGGACTGGCCTGGCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: HEWPGHLQYVVMSSDKVLLMCVR*DWPGSL Trigger: CAGCGAGCCAGGCCAGTCCCAGCGAACGCACATCAA...TAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | TCAGACAAAGTCTTAAAGTCTCTCTCCTGGAATCCCAGCAATCGTTACCTTCCTCAGTGCTGCGGGCTGTaGGTCTGCGGGATGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SDKVLKSLSWNPSNRYLPQCCGL*VCGMEG Trigger: CCCTTCCATCCCGCAGACCCACAGCCCGCAGCACTG...AGGAAGGTAACGATTGCTGGGATTCCAGGAGAGAGACTTTAAGACTTTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| 3UTR CAA 72 bp | GAGTGCTGTCCGTCTGGCCACGAGTGGCCCGGCCATTaGCAATATGTTGTCATGAGCTCAGACAAAGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: ECCPSGHEWPGH*QYVVMSSDKVL Trigger: TAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGGCCAGACGGACAGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACTCTCAATGTTGGAGATaGCGTCGCTGCTCAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LLRLQPASRQRHSECSRNSQCWR*RRCSVH Trigger: GTGAACTGAGCAGCGACGTCATCTCCAACATTGAGA...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR GCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTGACAGGCCCTTCTCCTaGTCGTCGGTCATCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLDRPFS*SSVIFM Trigger: CATGAAGATGACCGACGAGCAGGAGAAGGGCCTGTC...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CCA 90 bp | CGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAAAGTCTCTCTCTTCGACATCCACACGTaGCCCGCGGTCGCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RPFAICCHELRQSLKVSLFDIHT*PAVAGV Trigger: CACCCCTGCGACCGCGGGCCACGTGTGGATGTCGAA...GAGAGAGACTTTAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR TCA 90 bp | TCAGACAAAGTCTTAAAGTCTCTCTCCTGGAATCCCAGCAATCGTTACCTTCCTTGGGTGCGGTGCTGCTaGTGCCGTAACTGCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: SDKVLKSLSWNPSNRYLPWVRCC*CRNCQC Trigger: ACACTGGCAGTTACGGCATCAGCAGCACCGCACCCA...AGGAAGGTAACGATTGCTGGGATTCCAGGAGAGAGACTTTAAGACTTTGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR TCA 90 bp | CCACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTTGTAGTGAGGAAGGTTaGAGGGGCTGTAGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVARPFAICCHELRQSLCSEEG*RGCRRS Trigger: AGATCTCCTACAGCCCCTTCAACCTTCCTCACTACA...AAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR TCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCACGGGGTTCATGTAAGTaGAGGTGGAGTAGAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQRTQCSSLHLKPLICPRGSCK*RWSRAL Trigger: CAGGGCTCTACTCCACCTTCACTTACATGAACCCCG...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGCAATCGTTACCTTCCTTTACATGTCTTTAAAAATTAACGACAGACAACCGAGTCCTCCGACATaGTGGGGCTGGGGGCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPAIVTFLYMSLKINDRQPSPPT*WGWGRQ Trigger: CTGGCGCCCCCAGCCCCACCATGTCGGAGGACTCGG...TTGTCTGTCGTTAATTTTTAAAGACATGTAAAGGAAGGTAACGATTGCTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CCA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCAGAGCTGTGTGTAGACTaGTTGTTCCCAGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQRTQCSSLHLKPLICPELCVD*LFPVLR Trigger: CCGCAGCACTGGGAACAACCAGTCTACACACAGCTC...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR TCA 90 bp | CGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAAAGTCTCTCTCTCAGCTGCTCCGTCTTaGTGTGCGTTCGCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RPFAICCHELRQSLKVSLSAAPS*CAFAGT Trigger: AGTCCCAGCGAACGCACATCAAGACGGAGCAGCTGA...GAGAGAGACTTTAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR GCA 90 bp | TCAGACAAAGTCTTAAAGTCTCTCTCCTGGAATCCCAGCAATCGTTACCTTCCTTGTGGGGAGTCGGCTTaGAGCGCCTTGAAGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDKVLKSLSWNPSNRYLPCGESA*SALKIA Trigger: TGCTATCTTCAAGGCGCTGCAAGCCGACTCCCCACA...AGGAAGGTAACGATTGCTGGGATTCCAGGAGAGAGACTTTAAGACTTTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR GCA 90 bp | CGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAAAGTCTCTCTCTGCTCCGTCTTGATGTaGGTTCGCTGGGACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPFAICCHELRQSLKVSLCSVLM*VRWDWP Trigger: AGGCCAGTCCCAGCGAACGCACATCAAGACGGAGCA...GAGAGAGACTTTAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGAGAGAGACAGGTTTCCAGTTTGTTATCAACAACAACGAAAACAACATGCGTTCGCTGGGACTaGCCTGGCTCGCTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNRERQVSSLLSTTTKTTCVRWD*PGSLLS Trigger: GCTGAGCAGCGAGCCAGGCCAGTCCCAGCGAACGCA...TGTTGTTTTCGTTGTTGTTGATAACAAACTGGAAACCTGTCTCTCTCTGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR TCA 90 bp | CGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAAAGTCTCTCTCCGTTCATGGGTCGCTTaGCGTGTGGCTTGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFAICCHELRQSLKVSLRSWVA*RVACSC Trigger: GCAAGAACAAGCCACACGTCAAGCGACCCATGAACG...GAGAGAGACTTTAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR TCA 90 bp | TCAGACAAAGTCTTAAAGTCTCTCTCCTGGAATCCCAGCAATCGTTACCTTCCTGCATTAGGAGAGATGTaGGTCTGTTCCGTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDKVLKSLSWNPSNRYLPALGEM*VCSVAS Trigger: AGAGGCCACGGAACAGACTCACATCTCTCCTAATGC...AGGAAGGTAACGATTGCTGGGATTCCAGGAGAGAGACTTTAAGACTTTGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGCAATCGTTACCTTCCTTTACATGTCTTTAAAAATTAACGACAGACAACGCTGCTCAGCGTGGTaGGCGTGTGTGCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPAIVTFLYMSLKINDRQRCSAW*ACVPAA Trigger: AGCAGCAGGCACACACGCTCACCACGCTGAGCAGCG...TTGTCTGTCGTTAATTTTTAAAGACATGTAAAGGAAGGTAACGATTGCTGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGAGAGAGACAGGTTTCCAGTTTGTTATCAACAACAACGAAAACAACACGGAGGTGTCAGCGATaGGGGTGTACATGGGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNRERQVSSLLSTTTKTTRRCQR*GCTWGA Trigger: AGCGCCCCATGTACACCCCCATCGCTGACACCTCCG...TGTTGTTTTCGTTGTTGTTGATAACAAACTGGAAACCTGTCTCTCTCTGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR TCA 90 bp | TCAGACAAAGTCTTAAAGTCTCTCTCCTGGAATCCCAGCAATCGTTACCTTCCTATTGGTCAAACTCATTaGCGTCGAAGGTCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SDKVLKSLSWNPSNRYLPIGQTH*RRRSQC Trigger: ACATTGAGACCTTCGACGTCAATGAGTTTGACCAAT...AGGAAGGTAACGATTGCTGGGATTCCAGGAGAGAGACTTTAAGACTTTGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGAGAGAGACAGGTTTCCAGTTTGTTATCAACAACAACGAAAACAACATGGGTGGCCGTTGGGTaGCAAGTATTGGTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TNRERQVSSLLSTTTKTTWVAVG*QVLVKL Trigger: GAGTTTGACCAATACTTGCCACCCAACGGCCACCCA...TGTTGTTTTCGTTGTTGTTGATAACAAACTGGAAACCTGTCTCTCTCTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS GCA 90 bp | CTCGCTGCTCAGCGTGGTGAGCGTGTGTGCCTGCTGCTGCTGGGGTaGCTGCGGCTGCTGCGGGGGTGCTTGCTGCTGCGGAGGCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAAQRGERVCLLLLG*LRLLRGCLLLRRRL Trigger: CAGGCGCCTCCGCAGCAGCAAGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACACACGCTCACCACGCTGAGCAGCGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS CCA 90 bp | CCTGGCTCGCTGCTCAGCGTGGTGAGCGTGTGTGCCTGCTGCTGCTaGGGTGCCTGCGGCTGCTGCGGGGGTGCTTGCTGCTGCGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSLLSVVSVCACCC*GACGCCGGACCCGG Trigger: GCCTCCGCAGCAGCAAGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACACACGCTCACCACGCTGAGCAGCGAGCCAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS GCA 90 bp | TGGCCTGGCTCGCTGCTCAGCGTGGTGAGCGTGTGTGCCTGCTGCTaGTGGGGTGCCTGCGGCTGCTGCGGGGGTGCTTGCTGCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPGSLLSVVSVCACC*WGACGCCGGACCCG Trigger: TCCGCAGCAGCAAGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACACACGCTCACCACGCTGAGCAGCGAGCCAGGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS GCA 90 bp | TGGGACTGGCCTGGCTCGCTGCTCAGCGTGGTGAGCGTGTGTGCCTaGTGCTGCTGGGGTGCCTGCGGCTGCTGCGGGGGTGCTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WDWPGSLLSVVSVCA*CCWGACGCCGGACC Trigger: GCAGCAAGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACACACGCTCACCACGCTGAGCAGCGAGCCAGGCCAGTCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS GCA 90 bp | TCGCTGGGACTGGCCTGGCTCGCTGCTCAGCGTGGTGAGCGTGTGTaGCTGCTGCTGCTGGGGTGCCTGCGGCTGCTGCGGGGGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGLAWLAAQRGERV*LLLLGCLRLLRGCL Trigger: CAAGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACACACGCTCACCACGCTGAGCAGCGAGCCAGGCCAGTCCCAGCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS CCA 90 bp | CGGAGCCCGAGGGACAGGGCGAACCAGCCGAGTCCTCCGACATGGTaGGGCTGGGGGCGCCAGACAGGCCCTTCTCCTGCTCGTCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPRDRANQPSPPTW*GWGRQTGPSPARRS Trigger: TGACCGACGAGCAGGAGAAGGGCCTGTCTGGCGCCCCCAGCCCCACCATGTCGGAGGACTCGGCTGGTTCGCCCTGTCCCTCGGGCTCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | TACTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGCGGCGGACCCTGAGATaGCCCAGAGTGCTCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: YWWVHLARSAVRLATSGPRRTLR*PRVLAR Trigger: CCGGGCGAGCACTCTGGGCAATCTCAGGGTCCGCCG...CGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS CCA 90 bp | CCGAGGGACAGGGCGAACCAGCCGAGTCCTCCGACATGGTGGGGCTaGGGGCGCCAGACAGGCCCTTCTCCTGCTCGTCGGTCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRDRANQPSPPTWWG*GRQTGPSPARRSSS Trigger: TGAAGATGACCGACGAGCAGGAGAAGGGCCTGTCTGGCGCCCCCAGCCCCACCATGTCGGAGGACTCGGCTGGTTCGCCCTGTCCCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS GCA 90 bp | CTGCTGCTTCGACATCCACACGTGGCCCGCGGTCGCAGGGGTGGGTaGGGTGCTGCTGATGCCGTAACTGCCAGTGTAGGTGACCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRHPHVARGRRGG*GAADAVTASVGDLA Trigger: GGCCAGGTCACCTACACTGGCAGTTACGGCATCAGCAGCACCGCACCCACCCCTGCGACCGCGGGCCACGTGTGGATGTCGAAGCAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 90 bp | CTCTCCTTCTTCAGATCCGGCTCGCCCTTGGGGAAGGTGTTCTCCTaGGGCCGGGTGTTCTCCGTGTCCGAGCCGGAGCCCGAGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFFRSGSPLGKVFS*GRVFSVSEPEPEGQ Trigger: CTGTCCCTCGGGCTCCGGCTCGGACACGGAGAACACCCGGCCCCAGGAGAACACCTTCCCCAAGGGCGAGCCGGATCTGAAGAAGGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS TCA 90 bp | GGGGCGCTGCGCGGGGTTCATGTAAGTGAAGGTGGAGTAGAGCCCTaGGCCCTGGCCGGCTGCGTGACTGTAGTAGGAGCCGGAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GALRGVHVSEGGVEP*ALAGCVTVVGAGVL Trigger: CAGAACTCCGGCTCCTACTACAGTCACGCAGCCGGCCAGGGCTCAGGGCTCTACTCCACCTTCACTTACATGAACCCCGCGCAGCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 90 bp | CAGATCAACTTTGCCAGCTTGCACGTCGGTTTTGGGAGTGGTGGGTaGGGTCGGCGGACCCTGAGATTGCCCAGAGTGCTCGCCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QINFASLHVGFGSGG*GRRTLRLPRVLARG Trigger: TCCCCGGGCGAGCACTCTGGGCAATCTCAGGGTCCGCCGACCCCACCCACCACTCCCAAAACCGACGTGCAAGCTGGCAAAGTTGATCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS-3UTR CAA 90 bp | TACTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGATGTGGGGAGTCGGCTaGCAGCGCCTTGAAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: YWWVHLARSAVRLATSGPMWGVG*QRLEDS Trigger: GCTATCTTCAAGGCGCTGCAAGCCGACTCCCCACAT...CGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 90 bp | GCTTCAGATCAACTTTGCCAGCTTGCACGTCGGTTTTGGGAGTGGTaGGTGGGGTCGGCGGACCCTGAGATTGCCCAGAGTGCTCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASDQLCQLARRFWEW*VGSADPEIAQSARP Trigger: CGGGCGAGCACTCTGGGCAATCTCAGGGTCCGCCGACCCCACCCACCACTCCCAAAACCGACGTGCAAGCTGGCAAAGTTGATCTGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 90 bp | GGAACTTATCTTCCTCGCTCTCCTTCTTCAGATCCGGCTCGCCCTTaGGGAAGGTGTTCTCCTGGGGCCGGGTGTTCTCCGTGTCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTYLPRSPSSDPARP*GRCSPGAGCSPCPS Trigger: GCTCGGACACGGAGAACACCCGGCCCCAGGAGAACACCTTCCCCAAGGGCGAGCCGGATCTGAAGAAGGAGAGCGAGGAAGATAAGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 90 bp | CTCGCTTCAGATCAACTTTGCCAGCTTGCACGTCGGTTTTGGGAGTaGTGGGTGGGGTCGGCGGACCCTGAGATTGCCCAGAGTGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LASDQLCQLARRFWE*WVGSADPEIAQSAR Trigger: GCGAGCACTCTGGGCAATCTCAGGGTCCGCCGACCCCACCCACCACTCCCAAAACCGACGTGCAAGCTGGCAAAGTTGATCTGAAGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 90 bp | GTGCTCGCCCGGGGAGTGCACCTCACTCATGCCGGAGGAGGAATGTaGGGAGTCGGCTTGCAGCGCCTTGAAGATAGCATTAGGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLARGVHLTHAGGGM*GVGLQRLEDSIRRD Trigger: ATCTCTCCTAATGCTATCTTCAAGGCGCTGCAAGCCGACTCCCCACATTCCTCCTCCGGCATGAGTGAGGTGCACTCCCCGGGCGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS CCA 90 bp | GTAACTGCCAGTGTAGGTGACCTGGCCGTGGGTGGCCGGAACCCCTaGGTGGCCGTTGGGTGGCAAGTATTGGTCAAACTCATTGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: VTASVGDLAVGGRNP*VAVGWQVLVKLIDV Trigger: GACGTCAATGAGTTTGACCAATACTTGCCACCCAACGGCCACCCAGGGGTTCCGGCCACCCACGGCCAGGTCACCTACACTGGCAGTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS TCA 90 bp | GGGGAGTCGGCTTGCAGCGCCTTGAAGATAGCATTAGGAGAGATGTaGGTCTGTTCCGTGGCCTCTTCGGCCTCCGCTTGTCCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GESACSALKIALGEM*VCSVASSASACPFF Trigger: GAAGAACGGACAAGCGGAGGCCGAAGAGGCCACGGAACAGACTCACATCTCTCCTAATGCTATCTTCAAGGCGCTGCAAGCCGACTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS CCA 90 bp | CCGTGGGTGGCCGGAACCCCTGGGTGGCCGTTGGGTGGCAAGTATTaGTCAAACTCATTGACGTCGAAGGTCTCAATGTTGGAGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: PWVAGTPGWPLGGKY*SNSLTSKVSMLEMT Trigger: CGTCATCTCCAACATTGAGACCTTCGACGTCAATGAGTTTGACCAATACTTGCCACCCAACGGCCACCCAGGGGTTCCGGCCACCCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACGCTTGCACGTCGGTTTaGGGAGTGGTGGGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLRLQPASRQRHSECSRNACTSV*GVVGGV Trigger: GACCCCACCCACCACTCCCAAAACCGACGTGCAAGC...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | TACTGGTGGGTCCATCTGGCCAGGAGTGCTGTCCGTCTGGCCACGAGTGGCCCGTATTGGTCAAACTCATaGACGTCGAAGGTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: YWWVHLARSAVRLATSGPYWSNS*TSKVSM Trigger: CATTGAGACCTTCGACGTCAATGAGTTTGACCAATA...CGGGCCACTCGTGGCCAGACGGACAGCACTCCTGGCCAGATGGACCCACCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACCTCAGCTGCTCCGTCTaGATGTGCGTTCGCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLRLQPASRQRHSECSRNLSCSV*MCVRWD Trigger: GTCCCAGCGAACGCACATCAAGACGGAGCAGCTGAG...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCAAGATCCGGCTCGCCCTaGGGGAAGGTGTTCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLQRTQCSSLHLKPLICPRSGSP*GKVFSW Trigger: CCAGGAGAACACCTTCCCCAAGGGCGAGCCGGATCT...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTGAGGCTGCAGCCAGCAAGCAGGCAAAGGCACAGTGAATGTTCTAGGAACTCGAAGGTCTCAATGTaGGAGATGACGTCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLRLQPASRQRHSECSRNSKVSM*EMTSLL Trigger: GAGCAGCGACGTCATCTCCAACATTGAGACCTTCGA...GTTCCTAGAACATTCACTGTGCCTTTGCCTGCTTGCTGGCTGCAGCCTCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | CACGAGTGGCCCGGCCATTTGCAATATGTTGTCATGAGCTCAGACAAAGTCTTAGCTGTAGGAGATCTGTaGCGGGGAGTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HEWPGHLQYVVMSSDKVLAVGDL*RGVLLL Trigger: CAGCAGCAGCACTCCCCGCAACAGATCTCCTACAGC...TAAGACTTTGTCTGAGCTCATGACAACATATTGCAAATGGCCGGGCCACTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | ACATTGCAAAGGACTCAGTGCTCCTCACTGCATCTGAAACCTCTCATTTGTCCACTCTTCGGCCTCCGCTaGTCCGTTCTTCACCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TLQRTQCSSLHLKPLICPLFGLR*SVLHRL Trigger: AAGTCGGTGAAGAACGGACAAGCGGAGGCCGAAGAG...TGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCTTTGCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGCAATCGTTACCTTCCTTTACATGTCTTTAAAAATTAACGACAGACAAGTCAGCGTAGTCGTATaGCGAGCGGGTGATGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: IPAIVTFLYMSLKINDRQVSVVV*RAGDGR Trigger: CCGCCCATCACCCGCTCGCAATACGACTACGCTGAC...TTGTCTGTCGTTAATTTTTAAAGACATGTAAAGGAAGGTAACGATTGCTGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | ACAAACAGAGAGAGACAGGTTTCCAGTTTGTTATCAACAACAACGAAAACAACACTGTGTGTAGACTGGTaGTTCCCAGTGCTGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TNRERQVSSLLSTTTKTTLCVDW*FPVLRA Trigger: AGCCCGCAGCACTGGGAACAACCAGTCTACACACAG...TGTTGTTTTCGTTGTTGTTGATAACAAACTGGAAACCTGTCTCTCTCTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | ACAAACAGAGAGAGACAGGTTTCCAGTTTGTTATCAACAACAACGAAAACAACATCGGCTTGCAGCGCCTaGAAGATAGCATTAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TNRERQVSSLLSTTTKTTSACSA*KIALGE Trigger: CTCTCCTAATGCTATCTTCAAGGCGCTGCAAGCCGA...TGTTGTTTTCGTTGTTGTTGATAACAAACTGGAAACCTGTCTCTCTCTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS-3UTR CAA 90 bp | ACAAACAGAGAGAGACAGGTTTCCAGTTTGTTATCAACAACAACGAAAACAACACGCTTCAGATCAACTTaGCCAGCTTGCACGTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TNRERQVSSLLSTTTKTTRFRST*PACTSV Trigger: AACCGACGTGCAAGCTGGCAAAGTTGATCTGAAGCG...TGTTGTTTTCGTTGTTGTTGATAACAAACTGGAAACCTGTCTCTCTCTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
||
| CDS CCA 72 bp | GGAGGGGGCGGCGCCTGCTGCTTCGACATCCACACGTaGCCCGCGGTCGCAGGGGTGGGTGCGGTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GGGGACCFDIHT*PAVAGVGAVLL Trigger: CAGCAGCACCGCACCCACCCCTGCGACCGCGGGCCACGTGTGGATGTCGAAGCAGCAGGCGCCGCCCCCTCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS GCA 72 bp | CAGCGTGGTGAGCGTGTGTGCCTGCTGCTGCTGGGGTaGCTGCGGCTGCTGCGGGGGTGCTTGCTGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: QRGERVCLLLLG*LRLLRGCLLLR Trigger: CCGCAGCAGCAAGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACACACGCTCACCACGCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | CTGCTCAGCGTGGTGAGCGTGTGTGCCTGCTGCTGCTaGGGTGCCTGCGGCTGCTGCGGGGGTGCTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLSVVSVCACCC*GACGCCGGACC Trigger: GCAGCAAGCACCCCCGCAGCAGCCGCAGGCACCCCAGCAGCAGCAGGCACACACGCTCACCACGCTGAGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | TTCAGATCCGGCTCGCCCTTGGGGAAGGTGTTCTCCTaGGGCCGGGTGTTCTCCGTGTCCGAGCCGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FRSGSPLGKVFS*GRVFSVSEPEP Trigger: GGGCTCCGGCTCGGACACGGAGAACACCCGGCCCCAGGAGAACACCTTCCCCAAGGGCGAGCCGGATCTGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | GTTGTTCCCAGTGCTGCGGGCTGTGGGTCTGCGGGATaGAAGGGACCCCGGAGGTGTCAGCGATGGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: VVPSAAGCGSAG*KGPRRCQRWGC Trigger: ACACCCCCATCGCTGACACCTCCGGGGTCCCTTCCATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | CTGCTCCGTCTTGATGTGCGTTCGCTGGGACTGGCCTaGCTCGCTGCTCAGCGTGGTGAGCGTGTGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLRLDVRSLGLA*LAAQRGERVCL Trigger: CAGGCACACACGCTCACCACGCTGAGCAGCGAGCCAGGCCAGTCCCAGCGAACGCACATCAAGACGGAGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | CTCAGCTGCTCCGTCTTGATGTGCGTTCGCTGGGACTaGCCTGGCTCGCTGCTCAGCGTGGTGAGCGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LSCSVLMCVRWD*PGSLLSVVSVC Trigger: ACACACGCTCACCACGCTGAGCAGCGAGCCAGGCCAGTCCCAGCGAACGCACATCAAGACGGAGCAGCTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CAA 72 bp | GATGTGAGTCTGTTCCGTGGCCTCTTCGGCCTCCGCTaGTCCGTTCTTCACCGACTTCCTCCGCCGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DVSLFRGLFGLR*SVLHRLPPPGL Trigger: CAGCCCCGGCGGAGGAAGTCGGTGAAGAACGGACAAGCGGAGGCCGAAGAGGCCACGGAACAGACTCACATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | AGTGTAGGTGACCTGGCCGTGGGTGGCCGGAACCCCTaGGTGGCCGTTGGGTGGCAAGTATTGGTCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: SVGDLAVGGRNP*VAVGWQVLVKL Trigger: GAGTTTGACCAATACTTGCCACCCAACGGCCACCCAGGGGTTCCGGCCACCCACGGCCAGGTCACCTACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CAA 90 bp | GGGAACTTATCTTCCTCGCTCTCCTTCTTCAGATCCGGCTCGCCCTaGGGGAAGGTGTTCTCCTGGGGCCGGGTGTTCTCCGTGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GNLSSSLSFFRSGSP*GKVFSWGRVFSVSE Trigger: CTCGGACACGGAGAACACCCGGCCCCAGGAGAACACCTTCCCCAAGGGCGAGCCGGATCTGAAGAAGGAGAGCGAGGAAGATAAGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS GCA 72 bp | CTGCCAGAGGGCGCCCCTCTCGCTTCAGATCAACTTTaGCAGCTTGCACGTCGGTTTTGGGAGTGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPEGAPLASDQL*QLARRFWEWWV Trigger: CACCCACCACTCCCAAAACCGACGTGCAAGCTGGCAAAGTTGATCTGAAGCGAGAGGGGCGCCCTCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | GATCAACTTTGCCAGCTTGCACGTCGGTTTTGGGAGTaGTGGGTGGGGTCGGCGGACCCTGAGATTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DQLCQLARRFWE*WVGSADPEIAQ Trigger: CTGGGCAATCTCAGGGTCCGCCGACCCCACCCACCACTCCCAAAACCGACGTGCAAGCTGGCAAAGTTGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | CGGGGAGTGCACCTCACTCATGCCGGAGGAGGAATGTaGGGAGTCGGCTTGCAGCGCCTTGAAGATAGCATT | + |
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Preference number: 6 (lower is better) Translates to: RGVHLTHAGGGM*GVGLQRLEDSI Trigger: AATGCTATCTTCAAGGCGCTGCAAGCCGACTCCCCACATTCCTCCTCCGGCATGAGTGAGGTGCACTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CAA 72 bp | TCTGCCAGAGGGCGCCCCTCTCGCTTCAGATCAACTTaGCCAGCTTGCACGTCGGTTTTGGGAGTGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SARGRPSRFRST*PACTSVLGVVG Trigger: ACCCACCACTCCCAAAACCGACGTGCAAGCTGGCAAAGTTGATCTGAAGCGAGAGGGGCGCCCTCTGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CAA 90 bp | GCCGTGGGTGGCCGGAACCCCTGGGTGGCCGTTGGGTGGCAAGTATaGGTCAAACTCATTGACGTCGAAGGTCTCAATGTTGGAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: AVGGRNPWVAVGWQV*VKLIDVEGLNVGDD Trigger: GTCATCTCCAACATTGAGACCTTCGACGTCAATGAGTTTGACCAATACTTGCCACCCAACGGCCACCCAGGGGTTCCGGCCACCCACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS TCA 72 bp | AGTTCTGATGGTCAGCGTAGTCGTATTGCGAGCGGGTaGTGGGCGGGTAGGAGGGGCTGTAGTGAGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSDGQRSRIASG*WAGRRGCSEEG Trigger: ACCTTCCTCACTACAGCCCCTCCTACCCGCCCATCACCCGCTCGCAATACGACTACGCTGACCATCAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CCA 72 bp | GCTTCAGATCAACTTTGCCAGCTTGCACGTCGGTTTTaGGAGTGGTGGGTGGGGTCGGCGGACCCTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: ASDQLCQLARRF*EWWVGSADPEI Trigger: AATCTCAGGGTCCGCCGACCCCACCCACCACTCCCAAAACCGACGTGCAAGCTGGCAAAGTTGATCTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CAA 90 bp | GGAGTGCACCTCACTCATGCCGGAGGAGGAATGTGGGGAGTCGGCTaGCAGCGCCTTGAAGATAGCATTAGGAGAGATGTGAGTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GVHLTHAGGGMWGVG*QRLEDSIRRDVSLF Trigger: GAACAGACTCACATCTCTCCTAATGCTATCTTCAAGGCGCTGCAAGCCGACTCCCCACATTCCTCCTCCGGCATGAGTGAGGTGCACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS TCA 72 bp | GCTTGCAGCGCCTTGAAGATAGCATTAGGAGAGATGTaGGTCTGTTCCGTGGCCTCTTCGGCCTCCGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: ACSALKIALGEM*VCSVASSASAC Trigger: ACAAGCGGAGGCCGAAGAGGCCACGGAACAGACTCACATCTCTCCTAATGCTATCTTCAAGGCGCTGCAAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CAA 72 bp | CTCACTCATGCCGGAGGAGGAATGTGGGGAGTCGGCTaGCAGCGCCTTGAAGATAGCATTAGGAGAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: LTHAGGGMWGVG*QRLEDSIRRDV Trigger: CACATCTCTCCTAATGCTATCTTCAAGGCGCTGCAAGCCGACTCCCCACATTCCTCCTCCGGCATGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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| CDS CAA 72 bp | GGCCGGAACCCCTGGGTGGCCGTTGGGTGGCAAGTATaGGTCAAACTCATTGACGTCGAAGGTCTCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: GRNPWVAVGWQV*VKLIDVEGLNV Trigger: AACATTGAGACCTTCGACGTCAATGAGTTTGACCAATACTTGCCACCCAACGGCCACCCAGGGGTTCCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000579.3 |
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