Pregenerated sensors for SOX8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024176Ensembl transcript IDs: ENSMUST00000025003.10, ENSMUST00000173447.2, ENSMUST00000174560.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTGGGTaGGGTGGGTGGCCCATGGGTCTGGCCCACACTCCAGATCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: ASIARLVQVRLGGSG*GGWPMGLAHTPDQS Trigger: GGACTGATCTGGAGTGTGGGCCAGACCCATGGGCCACCCACCCCACCCACTACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| 3UTR GCA 90 bp | GCCTGGTGGAGGCCTCCAGGGACATCCGAAGGCCAAGCAAAGAGATaGTTAGGGATTCTGAGCCACCTCCCTCCTGCCCTTTACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: AWWRPPGTSEGQAKR*LGILSHLPPALYRA Trigger: TGCTCTGTAAAGGGCAGGAGGGAGGTGGCTCAGAATCCCTAAGCATCTCTTTGCTTGGCCTTCGGATGTCCCTGGAGGCCTCCACCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 90 bp | ACACAGGATGACAAAGCCTGGCTTCCTGCACATTCAGCAGGCACTTaGCGGAGTAAGGCCGTGCTGGCTGCCTCCAACCTCTACCGAGTA | + |
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Preference number: 1 (lower is better) Translates to: TQDDKAWLPAHSAGT*RSKAVLAASNLYRV Trigger: TACTCGGTAGAGGTTGGAGGCAGCCAGCACGGCCTTACTCCGTCAAGTGCCTGCTGAATGTGCAGGAAGCCAGGCTTTGTCATCCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 90 bp | TCCCCTGGCAGAAGTTTGGATATCCAGAAGCAAAGGGACACAGGATaGCAAAGCCTGGCTTCCTGCACATTCAGCAGGCACTTGACGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPGRSLDIQKQRDTG*QSLASCTFSRHLTE Trigger: CTCCGTCAAGTGCCTGCTGAATGTGCAGGAAGCCAGGCTTTGTCATCCTGTGTCCCTTTGCTTCTGGATATCCAAACTTCTGCCAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 90 bp | GCATCCATTGGTCCCAGGGAGGTCTTGGGTAGGCTGATAAGGACATaGAGCCCATTCTCTCCTTTGTCCTTAGGCATAACTATCTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASIGPREVLGRLIRT*SPFSPLSLGITIFL Trigger: TAAGAAGATAGTTATGCCTAAGGACAAAGGAGAGAATGGGCTTCATGTCCTTATCAGCCTACCCAAGACCTCCCTGGGACCAATGGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 90 bp | TCAAATGTGAGCAAATATACAAAGTGTTCAAGGCACAAGTTTCCGTaGCGTAGCCGGTTTATACACTCGACACAGCGACGCAGGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SNVSKYTKCSRHKFP*RSRFIHSTQRRRQG Trigger: TCCCTGCCTGCGTCGCTGTGTCGAGTGTATAAACCGGCTACGTCACGGAAACTTGTGCCTTGAACACTTTGTATATTTGCTCACATTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR GCA 90 bp | AGGCCAAGCAAAGAGATGCTTAGGGATTCTGAGCCACCTCCCTCCTaGCCTTTACAGAGCAAGCTTCCCCACTTTAATTTTGTCTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: RPSKEMLRDSEPPPS*PLQSKLPHFNFVLN Trigger: ATTTAAGACAAAATTAAAGTGGGGAAGCTTGCTCTGTAAAGGGCAGGAGGGAGGTGGCTCAGAATCCCTAAGCATCTCTTTGCTTGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTAGCTCTTGCTTGCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGGGGTGGGTGGCCCATaGGTCTGGCCCACACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SLSSCLLPLLAWCRSVLGGVGGP*VWPTLQ Trigger: CTGGAGTGTGGGCCAGACCCATGGGCCACCCACCCC...CCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCAAGAGCTAAGGCT 63% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCTCTTGCTTGCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGGTGGCCCATGGGTCTaGCCCACACTCCAGATCAGT | + |
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Preference number: 2 (lower is better) Translates to: LSSCLLPLLAWCRSVLGVGGPWV*PTLQIS Trigger: ACTGATCTGGAGTGTGGGCCAGACCCATGGGCCACC...TACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCAAGAGCTAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| 3UTR CAA 90 bp | GCTGGTGTACACTTATCCAAACCGGAGAGCAACGGAATGCCTGTTTaGGAAACCACCAGTCACCTCAGAGAAAGAAGAGGGGGAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: AGVHLSKPESNGMPV*ETTSHLRERRGGKE Trigger: CTCTTTTCCCCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTTTGGATAAGTGTACACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR GCA 90 bp | TGTATCCTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGCACGGAGAGCAACGGAATaGCTGTTTTGGAAACCACCA | + |
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Preference number: 2 (lower is better) Translates to: CILEHPQMSFHAFTVGTARRATE*LFWKPP Trigger: TGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCG...TGCTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAGGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR CCA 90 bp | GTTAGCATTGCCTGGTCAGAAAGGAACGAAACACAGCGAGTAAAGGACAGCAAACCCCTGGCAGAAGTTTaGATATCCAGAAGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VSIAWSERNETQRVKDSKPLAEV*ISRSKG Trigger: CCCTTTGCTTCTGGATATCCAAACTTCTGCCAGGGG...TTTGCTGTCCTTTACTCGCTGTGTTTCGTTCCTTTCTGACCAGGCAATGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCTCAAATGTGAGCAAATATACAAAGTGTTCAAGGCACAAGTTTCCGTGCAAAGGGACACAGGATaGCAAAGCCTGGCTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: KLLKCEQIYKVFKAQVSVQRDTG*QSLASC Trigger: GCAGGAAGCCAGGCTTTGTCATCCTGTGTCCCTTTG...CACGGAAACTTGTGCCTTGAACACTTTGTATATTTGCTCACATTTGAGAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCTCAAATGTGAGCAAATATACAAAGTGTTCAAGGCACAAGTTTCCGTGAGGCTGATAAGGACATaGAGCCCATTCTCTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: KLLKCEQIYKVFKAQVSVRLIRT*SPFSPL Trigger: CAAAGGAGAGAATGGGCTTCATGTCCTTATCAGCCT...CACGGAAACTTGTGCCTTGAACACTTTGTATATTTGCTCACATTTGAGAAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCTCAAATGTGAGCAAATATACAAAGTGTTCAAGGCACAAGTTTCCGTGTATCTTCTTATCTACTaGGATGCAAAACTCGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KLLKCEQIYKVFKAQVSVYLLIY*DAKLGS Trigger: GCTCCCGAGTTTTGCATCTCAGTAGATAAGAAGATA...CACGGAAACTTGTGCCTTGAACACTTTGTATATTTGCTCACATTTGAGAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CCA 72 bp | GCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTGGGTaGGGTGGGTGGCCCATGGGTCTGGCCCACACTCCA | + |
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Preference number: 3 (lower is better) Translates to: ARLVQVRLGGSG*GGWPMGLAHTP Trigger: TGGAGTGTGGGCCAGACCCATGGGCCACCCACCCCACCCACTACCCCCAAGACGGACCTGCACCAGGCGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| 3UTR TCA 72 bp | GACAAAGCCTGGCTTCCTGCACATTCAGCAGGCACTTaGCGGAGTAAGGCCGTGCTGGCTGCCTCCAACCTC | + |
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Preference number: 3 (lower is better) Translates to: DKAWLPAHSAGT*RSKAVLAASNL Trigger: GAGGTTGGAGGCAGCCAGCACGGCCTTACTCCGTCAAGTGCCTGCTGAATGTGCAGGAAGCCAGGCTTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR GCA 72 bp | AGGCCTCCAGGGACATCCGAAGGCCAAGCAAAGAGATaGTTAGGGATTCTGAGCCACCTCCCTCCTGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: RPPGTSEGQAKR*LGILSHLPPAL Trigger: AAGGGCAGGAGGGAGGTGGCTCAGAATCCCTAAGCATCTCTTTGCTTGGCCTTCGGATGTCCCTGGAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR GCA 72 bp | GAGCCAAGATTATCGTGGTTCTGCAGCTGCCCAGCTTaGAGGAAATTCCGTCTTCTACCGCTTGGCACCATG | + |
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Preference number: 3 (lower is better) Translates to: EPRLSWFCSCPA*RKFRLLPLGTM Trigger: CATGGTGCCAAGCGGTAGAAGACGGAATTTCCTGCAAGCTGGGCAGCTGCAGAACCACGATAATCTTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR GCA 72 bp | GCGCCTGGTGCCAAAGAGCCAAGATTATCGTGGTTCTaGAGCTGCCCAGCTTGCAGGAAATTCCGTCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: APGAKEPRLSWF*SCPACRKFRLL Trigger: TAGAAGACGGAATTTCCTGCAAGCTGGGCAGCTGCAGAACCACGATAATCTTGGCTCTTTGGCACCAGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CCA 72 bp | TCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTaGGAACAGCATCCATTGGTCCCAGGGAGGTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSIHRCPFMLSP*EQHPLVPGRSW Trigger: CCAAGACCTCCCTGGGACCAATGGATGCTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CCA 72 bp | GGGAGGCTCTCCTTTCACAGCTTGGTAAGTAGCGCCTaGTGCCAAAGAGCCAAGATTATCGTGGTTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: GRLSFHSLVSSA*CQRAKIIVVLQ Trigger: CTGCAGAACCACGATAATCTTGGCTCTTTGGCACCAGGCGCTACTTACCAAGCTGTGAAAGGAGAGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR CAA 90 bp | TCTACCGCTTGGCACCATGAAGGCAGAGATGCTACTCCTGCCTTTCAATGCCTGTCCCCTGGCAGAAGTTaGGATATCCAGAAGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: STAWHHEGRDATPAFQCLSPGRS*DIQKQR Trigger: CCTTTGCTTCTGGATATCCAAACTTCTGCCAGGGGA...CAGGCATTGAAAGGCAGGAGTAGCATCTCTGCCTTCATGGTGCCAAGCGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 72 bp | GGTCCCAGGGAGGTCTTGGGTAGGCTGATAAGGACATaGAGCCCATTCTCTCCTTTGTCCTTAGGCATAACT | + |
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Preference number: 3 (lower is better) Translates to: GPREVLGRLIRT*SPFSPLSLGIT Trigger: AGTTATGCCTAAGGACAAAGGAGAGAATGGGCTTCATGTCCTTATCAGCCTACCCAAGACCTCCCTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 72 bp | CTTGCAGGAAATTCCGTCTTCTACCGCTTGGCACCATaGAGGCAGAGATGCTACTCCTGCCTTTCAATGCCT | + |
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Preference number: 3 (lower is better) Translates to: LAGNSVFYRLAP*RQRCYSCLSMP Trigger: AGGCATTGAAAGGCAGGAGTAGCATCTCTGCCTTCATGGTGCCAAGCGGTAGAAGACGGAATTTCCTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR GCA 72 bp | TGGATGTATCCTCGAGCATCCACAGATGTCCTTTCATaGTTTCACCGTGGGAACAGCATCCATTGGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: WMYPRASTDVLS*FHRGNSIHWSQ Trigger: CTGGGACCAATGGATGCTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAGGATACATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CCA 72 bp | ATGAAGGCAGAGATGCTACTCCTGCCTTTCAATGCCTaGCCCAATGATGGTGCCGGGCTTCTTGTTCTAACT | + |
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Preference number: 3 (lower is better) Translates to: MKAEMLLLPFNA*PNDGAGLLVLT Trigger: AGTTAGAACAAGAAGCCCGGCACCATCATTGGGCCAGGCATTGAAAGGCAGGAGTAGCATCTCTGCCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR CAA 90 bp | GTTAGCATTGCCTGGTCAGAAAGGAACGAAACACAGCGAGTAAAGGACAGCAAACATCTCAGCCAAGCCTaGCTGGGAAGAACGGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: VSIAWSERNETQRVKDSKHLSQA*LGRTVV Trigger: TACCACCGTTCTTCCCAGCAAGGCTTGGCTGAGATG...TTTGCTGTCCTTTACTCGCTGTGTTTCGTTCCTTTCTGACCAGGCAATGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 72 bp | AGAAGTTTGGATATCCAGAAGCAAAGGGACACAGGATaGCAAAGCCTGGCTTCCTGCACATTCAGCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RSLDIQKQRDTG*QSLASCTFSRH Trigger: GTGCCTGCTGAATGTGCAGGAAGCCAGGCTTTGTCATCCTGTGTCCCTTTGCTTCTGGATATCCAAACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CCA 72 bp | ACTTATCCAAACCGGAGAGCAACGGAATGCCTGTTTTaGAAACCACCAGTCACCTCAGAGAAAGAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: TYPNRRATECLF*KPPVTSEKEEG Trigger: CCCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTTTGGATAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR GCA 72 bp | CTGGTGTACACTTATCCAAACCGGAGAGCAACGGAATaGCTGTTTTGGAAACCACCAGTCACCTCAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LVYTYPNRRATE*LFWKPPVTSEK Trigger: TTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTTTGGATAAGTGTACACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR-3UTR CAA 90 bp | GATGTATCCTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGAGCCCATTCTCTCCTTaGTCCTTAGGCATAACTATC | + |
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Preference number: 3 (lower is better) Translates to: DVSSSIHRCPFMLSPWEQSPFSP*SLGITI Trigger: GATAGTTATGCCTAAGGACAAAGGAGAGAATGGGCT...CTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAGGATACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR TCA 72 bp | AGCAAATATACAAAGTGTTCAAGGCACAAGTTTCCGTaGCGTAGCCGGTTTATACACTCGACACAGCGACGC | + |
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Preference number: 3 (lower is better) Translates to: SKYTKCSRHKFP*RSRFIHSTQRR Trigger: GCGTCGCTGTGTCGAGTGTATAAACCGGCTACGTCACGGAAACTTGTGCCTTGAACACTTTGTATATTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR GCA 72 bp | AAAGAGATGCTTAGGGATTCTGAGCCACCTCCCTCCTaGCCTTTACAGAGCAAGCTTCCCCACTTTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: KEMLRDSEPPPS*PLQSKLPHFNF Trigger: AAAATTAAAGTGGGGAAGCTTGCTCTGTAAAGGGCAGGAGGGAGGTGGCTCAGAATCCCTAAGCATCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | TGCTTGCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTGGGTGGGTGGAGATGCGGGTACTaGTCCGCCAGCTTGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CLLPLLAWCRSVLGVVGGWRCGY*SASLRR Trigger: GCGCCGCAAGCTGGCGGACCAGTACCCGCATCTCCA...CCCACCCACTACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| CDS-3UTR GCA 90 bp | TGCTTGCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTGGGTGGGTGGTCTTTCTTGTGCTaGACACGGAGCCTCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLLPLLAWCRSVLGVVGGWSFLC*TRSLSA Trigger: GGCCGAGAGGCTCCGTGTGCAGCACAAGAAAGACCA...CCCACCCACTACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| CDS-3UTR GCA 90 bp | GTGGGGTGGGTGGCCCATGGGTCTGGCCCACACTCCAGATCAGTCCTGCTATTGGGGTGGTCTTTCTTGTaGTGCACACGGAGCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: VGWVAHGSGPHSRSVLLLGWSFL*CTRSLS Trigger: CGAGAGGCTCCGTGTGCAGCACAAGAAAGACCACCC...CAATAGCAGGACTGATCTGGAGTGTGGGCCAGACCCATGGGCCACCCACCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| CDS-3UTR GCA 90 bp | TCGTGGTTCTGCAGCTGCCCAGCTTGCAGGAAATTCCGTCTTCTACCGCTTGGCCAGGCTGGTCCCAGTTaGTGCTGGGGCTGTGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: SWFCSCPACRKFRLLPLGQAGPS*CWGCVR Trigger: CCGCACACAGCCCCAGCAGCAACTGGGACCAGCCTG...GCCAAGCGGTAGAAGACGGAATTTCCTGCAAGCTGGGCAGCTGCAGAACCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | GTGGGAACAGCATCCATTGGTCCCAGGGAGGTCTTGGGTAGGCTGATAAGGACACCAGAGGCAGTGGCCTaGCTGGGCTCTGTGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGTASIGPREVLGRLIRTPEAVA*LGSVGR Trigger: CCTGCCCACAGAGCCCAGCCAGGCCACTGCCTCTGG...TGTCCTTATCAGCCTACCCAAGACCTCCCTGGGACCAATGGATGCTGTTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | TCGTGGTTCTGCAGCTGCCCAGCTTGCAGGAAATTCCGTCTTCTACCGCTTGGCGGTCCCAGTTGCTGCTaGGGCTGTGTGCGGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SWFCSCPACRKFRLLPLGGPSCC*GCVRVA Trigger: TGCCACCCGCACACAGCCCCAGCAGCAACTGGGACC...GCCAAGCGGTAGAAGACGGAATTTCCTGCAAGCTGGGCAGCTGCAGAACCACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | GTGGGAACAGCATCCATTGGTCCCAGGGAGGTCTTGGGTAGGCTGATAAGGACATGGAGATGCGGGTACTaGTCCGCCAGCTTGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VGTASIGPREVLGRLIRTWRCGY*SASLRR Trigger: GCGCCGCAAGCTGGCGGACCAGTACCCGCATCTCCA...TGTCCTTATCAGCCTACCCAAGACCTCCCTGGGACCAATGGATGCTGTTCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | TTCCTCCTGTGCCTGGTGGAGGCCTCCAGGGACATCCGAAGGCCAAGCAAAGAGGGTATTGGTAGAGGCTaGGAGGGTAGCCAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FLLCLVEASRDIRRPSKEGIGRG*EGSQGR Trigger: CCTACCCTGGCTACCCTCCCAGCCTCTACCAATACC...CTCTTTGCTTGGCCTTCGGATGTCCCTGGAGGCCTCCACCAGGCACAGGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | AAAGAGATGCTTAGGGATTCTGAGCCACCTCCCTCCTGCCCTTTACAGAGCAAGGCTGCTGGGGCTGTGTaGGGGTGGCATAGAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KEMLRDSEPPPSCPLQSKAAGAV*GWHREP Trigger: GGGCTCTCTATGCCACCCGCACACAGCCCCAGCAGC...CTTGCTCTGTAAAGGGCAGGAGGGAGGTGGCTCAGAATCCCTAAGCATCTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | CAGGAAATTCCGTCTTCTACCGCTTGGCACCATGAAGGCAGAGATGCTACTCCTGGGCCGCTTCACGTGTaGCTTGGCCTTGAGCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: QEIPSSTAWHHEGRDATPGPLHV*LGLERA Trigger: GGCACGCTCAAGGCCAAGCCACACGTGAAGCGGCCC...AGGAGTAGCATCTCTGCCTTCATGGTGCCAAGCGGTAGAAGACGGAATTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | TCCAAACCGGAGAGCAACGGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAAGGAGCCAGAGGCAGTaGCCTGGCTGGGCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SKPESNGMPVLETTSHLRRSQRQ*PGWALW Trigger: CCACAGAGCCCAGCCAGGCCACTGCCTCTGGCTCCT...TCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | GATGTATCCTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGCGCTGGCGAAGGAGCTaGCAGCCGTGGCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DVSSSIHRCPFMLSPWEQRWRRS*QPWQRQ Trigger: CTGCCTCTGCCACGGCTGCCAGCTCCTTCGCCAGCG...CTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAGGATACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | TGTATCCTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGCAGCTGGTCCCAGTTGCTaGTGGGGCTGTGTGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CILEHPQMSFHAFTVGTAAGPSC*WGCVRV Trigger: CACCCGCACACAGCCCCAGCAGCAACTGGGACCAGC...TGCTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAGGATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | GTGGGAACAGCATCCATTGGTCCCAGGGAGGTCTTGGGTAGGCTGATAAGGACAATCACGGATGCAGGCTaGGAAGCGTTCGTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGTASIGPREVLGRLIRTITDAG*EAFVCC Trigger: GCAGCAGACGAACGCTTCCCAGCCTGCATCCGTGAT...TGTCCTTATCAGCCTACCCAAGACCTCCCTGGGACCAATGGATGCTGTTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | ACGGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAGAAAGAAGAGGGGGAAAGTGGGTGGGGTGGGTaGCCCATGGGTCTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TECLFWKPPVTSEKEEGESGWGG*PMGLAC Trigger: ACAGGCCAGACCCATGGGCCACCCACCCCACCCACT...TTCCCCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | CTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGCATCCATTCTTGGGGGTAGTGGGTaGGGTGGGTGGCCCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEHPQMSFHAFTVGTASILGGSG*GGWPMG Trigger: ACCCATGGGCCACCCACCCCACCCACTACCCCCAAG...AATGGATGCTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | TGTATCCTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGCACCTGGCTGGGCTCTGTaGGCAGGGCTGAGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CILEHPQMSFHAFTVGTAPGWAL*AGLSGH Trigger: ATGGCCACTCAGCCCTGCCCACAGAGCCCAGCCAGG...TGCTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAGGATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR TCA 90 bp | AAGGGACACAGGATGACAAAGCCTGGCTTCCTGCACATTCAGCAGGCACTTGACGGGCTGAGTGGCCATTaGGGGGCAAGTACTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGHRMTKPGFLHIQQALDGLSGH*GASTGQ Trigger: TTGACCAGTACTTGCCCCTCAATGGCCACTCAGCCC...GTCAAGTGCCTGCTGAATGTGCAGGAAGCCAGGCTTTGTCATCCTGTGTCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | AGCAAAGAGATGCTTAGGGATTCTGAGCCACCTCCCTCCTGCCCTTTACAGAGCTGGTCTTTCTTGTGCTaGACACGGAGCCTCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKEMLRDSEPPPSCPLQSWSFLC*TRSLSA Trigger: GGCCGAGAGGCTCCGTGTGCAGCACAAGAAAGACCA...GCTCTGTAAAGGGCAGGAGGGAGGTGGCTCAGAATCCCTAAGCATCTCTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | GGGAGGCTCTCCTTTCACAGCTTGGTAAGTAGCGCCTGGTGCCAAAGAGCCAAGGCCTTAGCTCTTGCTTaGTTCCATTGCTCGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRLSFHSLVSSAWCQRAKALALA*FHCSPG Trigger: ACCAGGCGAGCAATGGAAGCAAGCAAGAGCTAAGGC...CTTGGCTCTTTGGCACCAGGCGCTACTTACCAAGCTGTGAAAGGAGAGCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR TCA 90 bp | AGCCAAGCCTTGCTGGGAAGAACGGTGGTAATGAGAAACCCCTCAATCTCACATCGAATCCTCCACGTGTaGCATGGAGCTAGCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQALLGRTVVMRNPSISHRILHV*HGASGA Trigger: GGCACCGCTAGCTCCATGTCACACGTGGAGGATTCG...ATGTGAGATTGAGGGGTTTCTCATTACCACCGTTCTTCCCAGCAAGGCTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | ACGGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAGAAAGAAGAGGGGGAAGTGGGCAGGGCTGAGTaGCCATTGAGGGGCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TECLFWKPPVTSEKEEGEVGRAE*PLRGKY Trigger: GTACTTGCCCCTCAATGGCCACTCAGCCCTGCCCAC...TTCCCCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | TCTACCGCTTGGCACCATGAAGGCAGAGATGCTACTCCTGCCTTTCAATGCCTGAGGGGCTGTAGTAGTTaGAAGCCTGCAGGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: STAWHHEGRDATPAFQCLRGCSS*KPAGQC Trigger: ACACTGACCTGCAGGCTTCCAACTACTACAGCCCCT...CAGGCATTGAAAGGCAGGAGTAGCATCTCTGCCTTCATGGTGCCAAGCGGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CAA 72 bp | AGAGCCAAGATTATCGTGGTTCTGCAGCTGCCCAGCTaGCAGGAAATTCCGTCTTCTACCGCTTGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RAKIIVVLQLPS*QEIPSSTAWHH Trigger: ATGGTGCCAAGCGGTAGAAGACGGAATTTCCTGCAAGCTGGGCAGCTGCAGAACCACGATAATCTTGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR TCA 90 bp | AAAGAGATGCTTAGGGATTCTGAGCCACCTCCCTCCTGCCCTTTACAGAGCAAGAGATGTCCACATTGCTaGAGTCGATGTTCTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEMLRDSEPPPSCPLQSKRCPHC*SRCSGA Trigger: GGCGCCAGAACATCGACTTCAGCAATGTGGACATCT...CTTGCTCTGTAAAGGGCAGGAGGGAGGTGGCTCAGAATCCCTAAGCATCTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | GTGTACACTTATCCAAACCGGAGAGCAACGGAATGCCTGTTTTGGAAACCACCAGAAGCGTTCGTCTGCTaGCTCAGCAGTATCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VYTYPNRRATECLFWKPPEAFVC*LSSIPS Trigger: CGAGGGGATACTGCTGAGGCAGCAGACGAACGCTTC...TGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTTTGGATAAGTGTACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | GGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAGAAAGAAGAGGGGGAAAAGGGTGGTCTTTCTTGTaGTGCACACGGAGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GMPVLETTSHLRERRGGKGWSFL*CTRSLS Trigger: CGAGAGGCTCCGTGTGCAGCACAAGAAAGACCACCC...TTTTCCCCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | AACCGGAGAGCAACGGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAGAAATGGCTAGGACTCAGCTaGTCCGTCTTGATCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRRATECLFWKPPVTSEKWLGLS*SVLICG Trigger: GCCACAGATCAAGACGGAGCAGCTGAGTCCTAGCCA...TTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR GCA 90 bp | CCCTGGCAGAAGTTTGGATATCCAGAAGCAAAGGGACACAGGATGACAAAGCCTAGTGTAATCACACTGTaGGCTGGCGAAGGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PWQKFGYPEAKGHRMTKPSVITL*AGEGAG Trigger: GCCAGCTCCTTCGCCAGCGCACAGTGTGATTACACT...AGGCTTTGTCATCCTGTGTCCCTTTGCTTCTGGATATCCAAACTTCTGCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | GTTAGCATTGCCTGGTCAGAAAGGAACGAAACACAGCGAGTAAAGGACAGCAAACTGAAGTCGATGTTCTaGCGCCCGCTGTCCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSIAWSERNETQRVKDSKLKSMF*RPLSTR Trigger: CCTAGTGGACAGCGGGCGCCAGAACATCGACTTCAG...TTTGCTGTCCTTTACTCGCTGTGTTTCGTTCCTTTCTGACCAGGCAATGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | AAGGGACACAGGATGACAAAGCCTGGCTTCCTGCACATTCAGCAGGCACTTGACTTGAGGGGCAAGTACTaGTCAAATTCATGGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: KGHRMTKPGFLHIQQALDLRGKY*SNSWTS Trigger: CGATGTCCATGAATTTGACCAGTACTTGCCCCTCAA...GTCAAGTGCCTGCTGAATGTGCAGGAAGCCAGGCTTTGTCATCCTGTGTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CAA 72 bp | CACTTATCCAAACCGGAGAGCAACGGAATGCCTGTTTaGGAAACCACCAGTCACCTCAGAGAAAGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSKPESNGMPV*ETTSHLRERRG Trigger: CCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTTTGGATAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR TCA 90 bp | AAACTTCTCAAATGTGAGCAAATATACAAAGTGTTCAAGGCACAAGTTTCCGTGCTCTGTGGGCAGGGCTaGGTGGCCATTGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLLKCEQIYKVFKAQVSVLCGQG*VAIEGQ Trigger: TTGCCCCTCAATGGCCACTCAGCCCTGCCCACAGAG...CACGGAAACTTGTGCCTTGAACACTTTGTATATTTGCTCACATTTGAGAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | CTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGCATCCATTACTCTTCCTTCGCCTTaGCTGGTATTTGTAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEHPQMSFHAFTVGTASITLPSP*LVFVIW Trigger: CCAGATTACAAATACCAGCCAAGGCGAAGGAAGAGT...AATGGATGCTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | AAAGAAGCGAAACTTCTCAAATGTGAGCAAATATACAAAGTGTTCAAGGCACAAGAGGGAGCTCCCTTGTaGGCCCACACAGGGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEAKLLKCEQIYKVFKAQEGAPL*AHTGDA Trigger: GGCATCCCCTGTGTGGGCCCACAAGGGAGCTCCCTC...TTGTGCCTTGAACACTTTGTATATTTGCTCACATTTGAGAAGTTTCGCTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | AAACTTCTCAAATGTGAGCAAATATACAAAGTGTTCAAGGCACAAGTTTCCGTGGTGGTGTACACAGGCTaGTCCCAGTTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLKCEQIYKVFKAQVSVVVYTG*SQLLLG Trigger: CCCCAGCAGCAACTGGGACCAGCCTGTGTACACCAC...CACGGAAACTTGTGCCTTGAACACTTTGTATATTTGCTCACATTTGAGAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| 3UTR CAA 72 bp | AAAATAGACACAGAAAGTGTTCATCTCAGCCAAGCCTaGCTGGGAAGAACGGTGGTAATGAGAAACCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIDTESVHLSQA*LGRTVVMRNPS Trigger: TGAGGGGTTTCTCATTACCACCGTTCTTCCCAGCAAGGCTTGGCTGAGATGAACACTTTCTGTGTCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CCA 90 bp | GGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAGAAAGAAGAGGGGGAAAATACTGGTCAAATTCATaGACATCGAAGGTATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GMPVLETTSHLRERRGGKYWSNS*TSKVSM Trigger: CATGGATACCTTCGATGTCCATGAATTTGACCAGTA...TTTTCCCCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS TCA 90 bp | TCCCGCGGGCGACGGTGGCGCGTCGGAGTCCGAATCCTCCACGTGTaGCATGGAGCTAGCGGTGCCAGACGGGCTGCAGGGAGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRGRRWRVGVRILHV*HGASGARRAAGRLG Trigger: GCCCAGCCTCCCTGCAGCCCGTCTGGCACCGCTAGCTCCATGTCACACGTGGAGGATTCGGACTCCGACGCGCCACCGTCGCCCGCGGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 |
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| CDS GCA 90 bp | GGGAGCTCCCTTGTGGGCCCACACAGGGGATGCCCCTATGCCGGTTaGCCCGGAGTGCGAGTAGGAAGCGCCTCCATAGGAGCCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLVGPHRGCPYAG*PGVRVGSASIGARG Trigger: GCCTCTGGCTCCTATGGAGGCGCTTCCTACTCGCACTCCGGGGCAACCGGCATAGGGGCATCCCCTGTGTGGGCCCACAAGGGAGCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS TCA 90 bp | CGTCTTGATCTGTGGCCGAAGGGGTCCTGCCTCTGTGGGCGAAGCTaGAGCCGAGGGAGCTCCCTTGTGGGCCCACACAGGGGATGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLDLWPKGSCLCGRS*SRGSSLVGPHRGCP Trigger: GGGGCATCCCCTGTGTGGGCCCACAAGGGAGCTCCCTCGGCTTCAGCTTCGCCCACAGAGGCAGGACCCCTTCGGCCACAGATCAAGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS TCA 90 bp | GTGCGCTGGCGAAGGAGCTGGCAGCCGTGGCAGAGGCAGCTGTGGTaGCGCTGGCCTGGGCACTGTAAGAGCCATAGTCAGCACGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VRWRRSWQPWQRQLW*RWPGHCKSHSQHGQ Trigger: CTGGCCGTGCTGACTATGGCTCTTACAGTGCCCAGGCCAGCGTCACCACAGCTGCCTCTGCCACGGCTGCCAGCTCCTTCGCCAGCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 90 bp | GCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTGGGTaGGGTGGGTGGCCCATGGGTCTGGCCTGTGTGGTGGTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASIARLVQVRLGGSG*GGWPMGLACVVVTV Trigger: CACAGTGACCACCACACAGGCCAGACCCATGGGCCACCCACCCCACCCACTACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS GCA 90 bp | TGGCGCCCGCTGTCCACTAGGCGGCGCCCTTCCAGCCTTAGCTCTTaGTTGCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WRPLSTRRRPSSLSS*LLPLLAWCRSVLGV Trigger: TACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCAAGAGCTAAGGCTGGAAGGGCGCCGCCTAGTGGACAGCGGGCGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 90 bp | GGTGTACACAGGCTGGTCCCAGTTGCTGCTGGGGCTGTGTGCGGGTaGCATAGAGAGCCCATTGAGCAGTGGCGAGGCATAGGGCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: GVHRLVPVAAGAVCG*HREPIEQWRGIGPT Trigger: CGTCGGCCCTATGCCTCGCCACTGCTCAATGGGCTCTCTATGCCACCCGCACACAGCCCCAGCAGCAACTGGGACCAGCCTGTGTACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS GCA 90 bp | CAGGGTGGTGTACACAGGCTGGTCCCAGTTGCTGCTGGGGCTGTGTaGGGGTGGCATAGAGAGCCCATTGAGCAGTGGCGAGGCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGGVHRLVPVAAGAV*GWHREPIEQWRGIG Trigger: CCCTATGCCTCGCCACTGCTCAATGGGCTCTCTATGCCACCCGCACACAGCCCCAGCAGCAACTGGGACCAGCCTGTGTACACCACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS TCA 90 bp | GGTGGGGTGGGTGGCCCATGGGTCTGGCCTGTGTGGTGGTCACTGTaGTGGTGTGCCTCGCCGAGCACTGCATCAGCTTTGTACATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGVGGPWVWPVWWSL*WCASPSTASALYMG Trigger: TCCCATGTACAAAGCTGATGCAGTGCTCGGCGAGGCACACCATCACAGTGACCACCACACAGGCCAGACCCATGGGCCACCCACCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS GCA 90 bp | GGGTGGCCCATGGGTCTGGCCTGTGTGGTGGTCACTGTGATGGTGTaGCTCGCCGAGCACTGCATCAGCTTTGTACATGGGACCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWPMGLACVVVTVMV*LAEHCISFVHGTTR Trigger: CCTGGTGGTCCCATGTACAAAGCTGATGCAGTGCTCGGCGAGGCACACCATCACAGTGACCACCACACAGGCCAGACCCATGGGCCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 90 bp | GTCATAACCCTTAAGCACCTGCGACACGGCATCACGGATGCAGGCTaGGAAGCGTTCGTCTGCTGCCTCAGCAGTATCCCCTCGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VITLKHLRHGITDAG*EAFVCCLSSIPSAA Trigger: GGCGGCCGAGGGGATACTGCTGAGGCAGCAGACGAACGCTTCCCAGCCTGCATCCGTGATGCCGTGTCGCAGGTGCTTAAGGGTTATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 |
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| CDS-3UTR CAA 90 bp | GTGGGGTGGGTGGCCCATGGGTCTGGCCCACACTCCAGATCAGTCCTGCTATTGAGCAAGCGCCACAGCTaGCCTAGGGTCTTGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGWVAHGSGPHSRSVLLLSKRHS*PRVLLS Trigger: GCTCAGCAAGACCCTAGGCAAGCTGTGGCGCTTGCT...CAATAGCAGGACTGATCTGGAGTGTGGGCCAGACCCATGGGCCACCCACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| CDS GCA 90 bp | CCCACCTGTGTGGTGGTCACTGTGATGGTGTGCCTCGCCGAGCACTaGATCAGCTTTGTACATGGGACCACCAGGGTGGTGGCCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTCVVVTVMVCLAEH*ISFVHGTTRVVAQF Trigger: GAACTGGGCCACCACCCTGGTGGTCCCATGTACAAAGCTGATGCAGTGCTCGGCGAGGCACACCATCACAGTGACCACCACACAGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173447.2 ENSMUST00000174560.2 |
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| CDS CCA 90 bp | TCGCTGCTGAGCTCGGAGATGTCCACATTGCTGAAGTCGATGTTCTaGCGCCCGCTGTCCACTAGGCGGCGCCCTTCCAGCCTTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSEMSTLLKSMF*RPLSTRRRPSSLSS Trigger: AGAGCTAAGGCTGGAAGGGCGCCGCCTAGTGGACAGCGGGCGCCAGAACATCGACTTCAGCAATGTGGACATCTCCGAGCTCAGCAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | TGCTTGCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTGGGTGGGTCTGGGTGGTCTTTCTaGTGCTGCACACGGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLPLLAWCRSVLGVVGGSGWSF*CCTRSL Trigger: GAGGCTCCGTGTGCAGCACAAGAAAGACCACCCAGA...CCCACCCACTACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174560.2 |
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| CDS TCA 90 bp | GTACATGGGACCACCAGGGTGGTGGCCCAGTTCAGTACCAGAGTCTaGGTCGCTCCGGCCAGTCTTCACACTCTTCCTTCGCCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VHGTTRVVAQFSTRV*VAPASLHTLPSPWL Trigger: CAGCCAAGGCGAAGGAAGAGTGTGAAGACTGGCCGGAGCGACTCAGACTCTGGTACTGAACTGGGCCACCACCCTGGTGGTCCCATGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 ENSMUST00000174560.2 |
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| CDS-3UTR CAA 90 bp | TCTACCGCTTGGCACCATGAAGGCAGAGATGCTACTCCTGCCTTTCAATGCCTGGCCGAGGGAGCTCCCTaGTGGGCCCACACAGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: STAWHHEGRDATPAFQCLAEGAP*WAHTGD Trigger: ATCCCCTGTGTGGGCCCACAAGGGAGCTCCCTCGGC...CAGGCATTGAAAGGCAGGAGTAGCATCTCTGCCTTCATGGTGCCAAGCGGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | ACGGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAGAAAGAAGAGGGGGAAACGTGTGGCTTGGCCTaGAGCGTGCCGCCACCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TECLFWKPPVTSEKEEGETCGLA*SVPPPP Trigger: CGGCGGTGGCGGCACGCTCAAGGCCAAGCCACACGT...TTCCCCCTCTTCTTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCTCTCCTTTCACAGCTTGGTAAGTAGCGCCTGGTGCCAAAGAGCCAAGTCTGGGTGGTCTTTCTaGTGCTGCACACGGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSFHSLVSSAWCQRAKSGWSF*CCTRSL Trigger: GAGGCTCCGTGTGCAGCACAAGAAAGACCACCCAGA...CTTGGCTCTTTGGCACCAGGCGCTACTTACCAAGCTGTGAAAGGAGAGCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | TTCCTCCTGTGCCTGGTGGAGGCCTCCAGGGACATCCGAAGGCCAAGCAAAGAGATGGAAGTAAGGGTATaGGTAGAGGCTGGGAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLLCLVEASRDIRRPSKEMEVRV*VEAGRV Trigger: TACCCTCCCAGCCTCTACCAATACCCTTACTTCCAT...CTCTTTGCTTGGCCTTCGGATGTCCCTGGAGGCCTCCACCAGGCACAGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTCCCCTGGCAGAAGTTTGGATATCCAGAAGCAAAGGGACACAGGATGCTCAGCTGCTCCGTCTaGATCTGTGGCCGAAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVPWQKFGYPEAKGHRMLSCSV*ICGRRG Trigger: ACCCCTTCGGCCACAGATCAAGACGGAGCAGCTGAG...CATCCTGTGTCCCTTTGCTTCTGGATATCCAAACTTCTGCCAGGGGACAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | CCCTGGCAGAAGTTTGGATATCCAGAAGCAAAGGGACACAGGATGACAAAGCCTAGCAAGCGCCACAGCTaGCCTAGGGTCTTGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PWQKFGYPEAKGHRMTKPSKRHS*PRVLLS Trigger: GCTCAGCAAGACCCTAGGCAAGCTGTGGCGCTTGCT...AGGCTTTGTCATCCTGTGTCCCTTTGCTTCTGGATATCCAAACTTCTGCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | AACCGGAGAGCAACGGAATGCCTGTTTTGGAAACCACCAGTCACCTCAGAGAAATCTTGCTTGCTTCCATaGCTCGCCTGGTGCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: NRRATECLFWKPPVTSEKSCLLP*LAWCRS Trigger: GGACCTGCACCAGGCGAGCAATGGAAGCAAGCAAGA...TTTCTCTGAGGTGACTGGTGGTTTCCAAAACAGGCATTCCGTTGCTCTCCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | GATGTATCCTCGAGCATCCACAGATGTCCTTTCATGCTTTCACCGTGGGAACAGAGGGCTGAGTGGCCATaGAGGGGCAAGTACTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: DVSSSIHRCPFMLSPWEQRAEWP*RGKYWS Trigger: TGACCAGTACTTGCCCCTCAATGGCCACTCAGCCCT...CTGTTCCCACGGTGAAAGCATGAAAGGACATCTGTGGATGCTCGAGGATACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 90 bp | CTGGGCTCTGTGGGCAGGGCTGAGTGGCCATTGAGGGGCAAGTACTaGTCAAATTCATGGACATCGAAGGTATCCATGTTACTGATAACC | + |
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Preference number: 5 (lower is better) Translates to: LGSVGRAEWPLRGKY*SNSWTSKVSMLLIT Trigger: GGTTATCAGTAACATGGATACCTTCGATGTCCATGAATTTGACCAGTACTTGCCCCTCAATGGCCACTCAGCCCTGCCCACAGAGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS-3UTR CAA 90 bp | CCCTGGCAGAAGTTTGGATATCCAGAAGCAAAGGGACACAGGATGACAAAGCCTTCGGAGATGTCCACATaGCTGAAGTCGATGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PWQKFGYPEAKGHRMTKPSEMST*LKSMFW Trigger: CCAGAACATCGACTTCAGCAATGTGGACATCTCCGA...AGGCTTTGTCATCCTGTGTCCCTTTGCTTCTGGATATCCAAACTTCTGCCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS GCA 72 bp | CACGGCATCACGGATGCAGGCTGGGAAGCGTTCGTCTaGTGCCTCAGCAGTATCCCCTCGGCCGCCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: HGITDAGWEAFV*CLSSIPSAAAP Trigger: GGGGGCGGCGGCCGAGGGGATACTGCTGAGGCAGCAGACGAACGCTTCCCAGCCTGCATCCGTGATGCCGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 |
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| CDS CCA 72 bp | GCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTGGGTaGGGTGGGTGGCCCATGGGTCTGGCCTGTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ARLVQVRLGGSG*GGWPMGLACVV Trigger: CACCACACAGGCCAGACCCATGGGCCACCCACCCCACCCACTACCCCCAAGACGGACCTGCACCAGGCGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS TCA 72 bp | CGACGGTGGCGCGTCGGAGTCCGAATCCTCCACGTGTaGCATGGAGCTAGCGGTGCCAGACGGGCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRWRVGVRILHV*HGASGARRAAG Trigger: CCCTGCAGCCCGTCTGGCACCGCTAGCTCCATGTCACACGTGGAGGATTCGGACTCCGACGCGCCACCGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 |
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| CDS TCA 72 bp | CTGTGGCCGAAGGGGTCCTGCCTCTGTGGGCGAAGCTaGAGCCGAGGGAGCTCCCTTGTGGGCCCACACAGG | + |
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Preference number: 6 (lower is better) Translates to: LWPKGSCLCGRS*SRGSSLVGPHR Trigger: CCTGTGTGGGCCCACAAGGGAGCTCCCTCGGCTTCAGCTTCGCCCACAGAGGCAGGACCCCTTCGGCCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS GCA 72 bp | AGCCGAGGGAGCTCCCTTGTGGGCCCACACAGGGGATaGCCCTATGCCGGTTGCCCCGGAGTGCGAGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SRGSSLVGPHRG*PYAGCPGVRVG Trigger: TCCTACTCGCACTCCGGGGCAACCGGCATAGGGGCATCCCCTGTGTGGGCCCACAAGGGAGCTCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS GCA 72 bp | CTTGTGGGCCCACACAGGGGATGCCCCTATGCCGGTTaGCCCGGAGTGCGAGTAGGAAGCGCCTCCATAGGA | + |
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Preference number: 6 (lower is better) Translates to: LVGPHRGCPYAG*PGVRVGSASIG Trigger: TCCTATGGAGGCGCTTCCTACTCGCACTCCGGGGCAACCGGCATAGGGGCATCCCCTGTGTGGGCCCACAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CAA 90 bp | CGCCCGCTGTCCACTAGGCGGCGCCCTTCCAGCCTTAGCTCTTGCTaGCTTCCATTGCTCGCCTGGTGCAGGTCCGTCTTGGGGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: RPLSTRRRPSSLSSC*LPLLAWCRSVLGVV Trigger: CACTACCCCCAAGACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCAAGAGCTAAGGCTGGAAGGGCGCCGCCTAGTGGACAGCGGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS GCA 72 bp | CTGTCCACTAGGCGGCGCCCTTCCAGCCTTAGCTCTTaGTTGCTTCCATTGCTCGCCTGGTGCAGGTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: LSTRRRPSSLSS*LLPLLAWCRSV Trigger: GACGGACCTGCACCAGGCGAGCAATGGAAGCAAGCAAGAGCTAAGGCTGGAAGGGCGCCGCCTAGTGGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 72 bp | AGCTCGGAGATGTCCACATTGCTGAAGTCGATGTTCTaGCGCCCGCTGTCCACTAGGCGGCGCCCTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSEMSTLLKSMF*RPLSTRRRPSS Trigger: GCTGGAAGGGCGCCGCCTAGTGGACAGCGGGCGCCAGAACATCGACTTCAGCAATGTGGACATCTCCGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 72 bp | TGGAAGCCTGCAGGTCAGTGTAATCACACTGTGCGCTaGCGAAGGAGCTGGCAGCCGTGGCAGAGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WKPAGQCNHTVR*RRSWQPWQRQL Trigger: CAGCTGCCTCTGCCACGGCTGCCAGCTCCTTCGCCAGCGCACAGTGTGATTACACTGACCTGCAGGCTTCCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 72 bp | AGGCTGGTCCCAGTTGCTGCTGGGGCTGTGTGCGGGTaGCATAGAGAGCCCATTGAGCAGTGGCGAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: RLVPVAAGAVCG*HREPIEQWRGI Trigger: TATGCCTCGCCACTGCTCAATGGGCTCTCTATGCCACCCGCACACAGCCCCAGCAGCAACTGGGACCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CCA 72 bp | CTTAAGCACCTGCGACACGGCATCACGGATGCAGGCTaGGAAGCGTTCGTCTGCTGCCTCAGCAGTATCCCC | + |
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Preference number: 6 (lower is better) Translates to: LKHLRHGITDAG*EAFVCCLSSIP Trigger: GGGGATACTGCTGAGGCAGCAGACGAACGCTTCCCAGCCTGCATCCGTGATGCCGTGTCGCAGGTGCTTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 |
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| CDS CCA 72 bp | GGTGTGCCTCGCCGAGCACTGCATCAGCTTTGTACATaGGACCACCAGGGTGGTGGCCCAGTTCAGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: GVPRRALHQLCT*DHQGGGPVQYQ Trigger: CTGGTACTGAACTGGGCCACCACCCTGGTGGTCCCATGTACAAAGCTGATGCAGTGCTCGGCGAGGCACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 ENSMUST00000174560.2 |
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| CDS TCA 72 bp | ACCACCAGGGTGGTGGCCCAGTTCAGTACCAGAGTCTaGGTCGCTCCGGCCAGTCTTCACACTCTTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: TTRVVAQFSTRV*VAPASLHTLPS Trigger: CGAAGGAAGAGTGTGAAGACTGGCCGGAGCGACTCAGACTCTGGTACTGAACTGGGCCACCACCCTGGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 ENSMUST00000174560.2 |
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| CDS GCA 72 bp | CTGGAGCCCACCTGTGTGGTGGTCACTGTGATGGTGTaGCTCGCCGAGCACTGCATCAGCTTTGTACATGGG | + |
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Preference number: 6 (lower is better) Translates to: LEPTCVVVTVMV*LAEHCISFVHG Trigger: CCCATGTACAAAGCTGATGCAGTGCTCGGCGAGGCACACCATCACAGTGACCACCACACAGGTGGGCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173447.2 ENSMUST00000174560.2 |
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| CDS GCA 72 bp | ATGGGTCTGGCCTGTGTGGTGGTCACTGTGATGGTGTaGCTCGCCGAGCACTGCATCAGCTTTGTACATGGG | + |
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Preference number: 6 (lower is better) Translates to: MGLACVVVTVMV*LAEHCISFVHG Trigger: CCCATGTACAAAGCTGATGCAGTGCTCGGCGAGGCACACCATCACAGTGACCACCACACAGGCCAGACCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025003.10 |
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| CDS CAA 72 bp | AGTCGCTCCGGCCAGTCTTCACACTCTTCCTTCGCCTaGGCTGGTATTTGTAATCTGGGTGGTCTTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SRSGQSSHSSFA*AGICNLGGLSC Trigger: ACAAGAAAGACCACCCAGATTACAAATACCAGCCAAGGCGAAGGAAGAGTGTGAAGACTGGCCGGAGCGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025003.10 ENSMUST00000173447.2 ENSMUST00000174560.2 |
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