Pregenerated sensors for SOX7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063060Ensembl transcript IDs: ENSMUST00000079652.7
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGCAGGAGCTCCAATGCACTGGGCTTCTTCCCATCAGCTACACTaGTGGTGTAGAGCGGCTAGGAAATCCTACTGCAAACAGCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KAGAPMHWASSHQLH*WCRAARKSYCKQLP Trigger: TGGGAGCTGTTTGCAGTAGGATTTCCTAGCCGCTCTACACCATCAGTGTAGCTGATGGGAAGAAGCCCAGTGCATTGGAGCTCCTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR GCA 90 bp | CTTGGCAGCAGGCAGTCTTACCCACTGAGACATCCCACACCATCTTaGCAGACCAAAGGTGAATATTTTTCTCGACTGAAGGAGTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LGSRQSYPLRHPTPS*QTKGEYFSRLKEFL Trigger: AAGAAACTCCTTCAGTCGAGAAAAATATTCACCTTTGGTCTGGCAAGATGGTGTGGGATGTCTCAGTGGGTAAGACTGCCTGCTGCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 90 bp | ATAGAACGTAGGTCATCAGACTTGGCAGCAGGCAGTCTTACCCACTaGGACATCCCACACCATCTTGCCAGACCAAAGGTGAATATTTTT | + |
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Preference number: 1 (lower is better) Translates to: IERRSSDLAAGSLTH*DIPHHLARPKVNIF Trigger: AAAAATATTCACCTTTGGTCTGGCAAGATGGTGTGGGATGTCTCAGTGGGTAAGACTGCCTGCTGCCAAGTCTGATGACCTACGTTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR GCA 90 bp | GGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGGGGTaGGACCAAAGCTCAGAAACATCTTTGGGTGTCACAGGGTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: GMFLQRRFREWKCLG*DQSSETSLGVTGCL Trigger: CAAACACCCTGTGACACCCAAAGATGTTTCTGAGCTTTGGTCGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 90 bp | TGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTaGGGTGCGACCAAAGCTCAGAAACATCTTTGGGTGTCACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: CLVCSFKGGLENGNV*GATKAQKHLWVSQG Trigger: ACCCTGTGACACCCAAAGATGTTTCTGAGCTTTGGTCGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 90 bp | GTTAGCTCAGTGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATaGAAATGTCTGGGGTGCGACCAAAGCTCAGAAACATCTTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: VSSVFGMFLQRRFRE*KCLGCDQSSETSLG Trigger: ACCCAAAGATGTTTCTGAGCTTTGGTCGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACACTGAGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 90 bp | ATCCCACACCATCTTGCCAGACCAAAGGTGAATATTTTTCTCGACTaGAGGAGTTTCTTTGGAATTCTAGGGTGGCTGTGGACAGTATTA | + |
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Preference number: 1 (lower is better) Translates to: IPHHLARPKVNIFLD*RSFFGILGWLWTVL Trigger: TAATACTGTCCACAGCCACCCTAGAATTCCAAAGAAACTCCTTCAGTCGAGAAAAATATTCACCTTTGGTCTGGCAAGATGGTGTGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 90 bp | TGCCAGACCAAAGGTGAATATTTTTCTCGACTGAAGGAGTTTCTTTaGAATTCTAGGGTGGCTGTGGACAGTATTATAGGAAAGCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CQTKGEYFSRLKEFL*NSRVAVDSIIGKQK Trigger: TTTCTGCTTTCCTATAATACTGTCCACAGCCACCCTAGAATTCCAAAGAAACTCCTTCAGTCGAGAAAAATATTCACCTTTGGTCTGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGAGAGAAAAGCCCTCCTaGGAGCAAGGGGCAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TRTKFPSRPGEWCLGFQAREKPS*EQGAAD Trigger: GTCTGCTGCCCCTTGCTCCCAGGAGGGCTTTTCTCT...CGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR GCA 90 bp | ACAAGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGTTCTGCTCAGCTCAGTaGTTCATAGGGAGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: TRTKFPSRPGEWCLGFQAFCSAQ*FIGRRG Trigger: TCCCCTCCTCCCTATGAAGCACTGAGCTGAGCAGAA...CGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CAA 90 bp | TCCTGGCTTTTGACCGGAAGGCTCTGGAACAGCAGTTTTGACCTCTaGCCACCAAGGAGTGGCATCGCCACAGTTTCTGCTCAGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SWLLTGRLWNSSFDL*PPRSGIATVSAQLS Trigger: ACTGAGCTGAGCAGAAACTGTGGCGATGCCACTCCTTGGTGGCAAGAGGTCAAAACTGCTGTTCCAGAGCCTTCCGGTCAAAAGCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTATTATAGGAAAGCAGAAAACCTGGGTCCTTGGGCAGTCATTCATTCAAGGGGATGGCAGGGCTaGGCCAGGCTCCATTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GQYYRKAENLGPWAVIHSRGWQG*ARLHSS Trigger: GGAGGAATGGAGCCTGGCCCAGCCCTGCCATCCCCT...TGAATGAATGACTGCCCAAGGACCCAGGTTTTCTGCTTTCCTATAATACTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGAGGAGACATTGTCACAGTTaGGAAGAATCTAAATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RTKFPSRPGEWCLGFQARRHCHS*EESKSG Trigger: CCCTGATTTAGATTCTTCTCAACTGTGACAATGTCT...CCTCGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCTTGGGCAGTCATTCATTCATACTTTCCTTGGCCTTGAGAGGGCTGTATTGACCGGAAGGCTCTaGAACAGCAGTTTTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: WVLGQSFIHTFLGLERAVLTGRL*NSSFDL Trigger: GAGGTCAAAACTGCTGTTCCAGAGCCTTCCGGTCAA...TACAGCCCTCTCAAGGCCAAGGAAAGTATGAATGAATGACTGCCCAAGGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CCA 90 bp | TCATTCATTCATACTTTCCTTGGCCTTGAGAGGGCTGTAACTTGGAGATCCATAGAGACTGAACTGAGATaGACCCCAGGCCCAGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SFIHTFLGLERAVTWRSIETELR*TPGPGS Trigger: GGACCCTGGGCCTGGGGTCCATCTCAGTTCAGTCTC...TATGGATCTCCAAGTTACAGCCCTCTCAAGGCCAAGGAAAGTATGAATGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR TCA 90 bp | TGGTGCCACTCACCTTTAATCCCAGTACCCAGGAGGCAGAGGCAGGCTTACTTTTTGCCAGACCAAAGGTaGATATTTTTCTCGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: WCHSPLIPVPRRQRQAYFLPDQR*IFFSTE Trigger: TTCAGTCGAGAAAAATATTCACCTTTGGTCTGGCAA...AAAGTAAGCCTGCCTCTGCCTCCTGGGTACTGGGATTAAAGGTGAGTGGCACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CAA 90 bp | GTGAGCATGCTCAAGCACACATATAATGCAGGGGCACACGTGCATTaGGAAGTCAGAATACAACTTGCAGGAGTCAGTTCTCTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VSMLKHTYNAGAHVH*EVRIQLAGVSSLLP Trigger: TGGAAGAAGAGAACTGACTCCTGCAAGTTGTATTCTGACTTCCAAATGCACGTGTGCCCCTGCATTATATGTGTGCTTGAGCATGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR GCA 90 bp | TCATTCATTCATACTTTCCTTGGCCTTGAGAGGGCTGTAACTTGGAGATCCATAGCTAGGAAATCCTACTaGAAACAGCTCCCAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SFIHTFLGLERAVTWRSIARKSY*KQLPRL Trigger: CAGCCTTGGGAGCTGTTTGCAGTAGGATTTCCTAGC...TATGGATCTCCAAGTTACAGCCCTCTCAAGGCCAAGGAAAGTATGAATGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CCA 90 bp | TCATTCATTCATACTTTCCTTGGCCTTGAGAGGGCTGTAACTTGGAGATCCATACAGGGTCCATCTTACTaGGAGCACCACAGATCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SFIHTFLGLERAVTWRSIQGPSY*EHHRSE Trigger: TTCTGATCTGTGGTGCTCCCAGTAAGATGGACCCTG...TATGGATCTCCAAGTTACAGCCCTCTCAAGGCCAAGGAAAGTATGAATGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGGGGTGCGCATCCCACACCATCTTaGCAGACCAAAGGTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: CLVCSFKGGLENGNVWGAHPTPS*QTKGEY Trigger: ATATTCACCTTTGGTCTGGCAAGATGGTGTGGGATG...CGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CAA 90 bp | ATATACACGTGTCCAAGGGCAGACAAGAGTCTGTTAGCTCAGTGTTaGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: IYTCPRADKSLLAQC*VCSFKGGLENGNVW Trigger: CCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACACTGAGCTAACAGACTCTTGTCTGCCCTTGGACACGTGTATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CCA 90 bp | TCCATCCGGGACTGGGCACCAGTCAATTACATCATCAACAATTCACTATTTGTTCTGAAGGAGTTTCTTTaGAATTCTAGGGTGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SIRDWAPVNYIINNSLFVLKEFL*NSRVAV Trigger: CACAGCCACCCTAGAATTCCAAAGAAACTCCTTCAG...AACAAATAGTGAATTGTTGATGATGTAATTGACTGGTGCCCAGTCCCGGATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CAA 90 bp | ACAAGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGGCTGGATCCTGGCTTTaGACCGGAAGGCTCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: TRTKFPSRPGEWCLGFQAAGSWL*TGRLWN Trigger: GTTCCAGAGCCTTCCGGTCAAAAGCCAGGATCCAGC...CGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR GCA 72 bp | CCTCTTGCCACCAAGGAGTGGCATCGCCACAGTTTCTaGTCAGCTCAGTGCTTCATAGGGAGGAGGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: PLATKEWHRHSF*SAQCFIGRRGW Trigger: CCATCCCCTCCTCCCTATGAAGCACTGAGCTGAGCAGAAACTGTGGCGATGCCACTCCTTGGTGGCAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | AGGAGCGCTGGATCCTGGCTTTTGACCGGAAGGCTCTaGAACAGCAGTTTTGACCTCTTGCCACCAAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: RSAGSWLLTGRL*NSSFDLLPPRS Trigger: ACTCCTTGGTGGCAAGAGGTCAAAACTGCTGTTCCAGAGCCTTCCGGTCAAAAGCCAGGATCCAGCGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | GAAACAAGAACCAAGTTCCCTTCACGCCCAGGGGAATaGTGCCTGGGATTCCAAGCGAGGGGCCCTTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: ETRTKFPSRPGE*CLGFQARGPLN Trigger: ATTCAAAGGGCCCCTCGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CAA 90 bp | TGGTGCCACTCACCTTTAATCCCAGTACCCAGGAGGCAGAGGCAGGCTTACTTTCGTAGGTCATCAGACTaGGCAGCAGGCAGTCTTACC | + |
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Preference number: 3 (lower is better) Translates to: WCHSPLIPVPRRQRQAYFRRSSD*AAGSLT Trigger: GGTAAGACTGCCTGCTGCCAAGTCTGATGACCTACG...AAAGTAAGCCTGCCTCTGCCTCCTGGGTACTGGGATTAAAGGTGAGTGGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | AGGTCATCAGACTTGGCAGCAGGCAGTCTTACCCACTaGGACATCCCACACCATCTTGCCAGACCAAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: RSSDLAAGSLTH*DIPHHLARPKV Trigger: CACCTTTGGTCTGGCAAGATGGTGTGGGATGTCTCAGTGGGTAAGACTGCCTGCTGCCAAGTCTGATGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | GCCAACCCTCACTGTACAGGAGAGAATAGTCAGGGCTaGTCAAGCCAGAGTGGGGTTTTGCCAGTTAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: ANPHCTGENSQG*SSQSGVLPVRD Trigger: GTCTCTAACTGGCAAAACCCCACTCTGGCTTGACCAGCCCTGACTATTCTCTCCTGTACAGTGAGGGTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CAA 90 bp | GTAGAGCGGCTAGGAAATCCTACTGCAAACAGCTCCCAAGGCTGTGCTTCCTTGAGCAGTTTTGACCTCTaGCCACCAAGGAGTGGCATC | + |
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Preference number: 3 (lower is better) Translates to: VERLGNPTANSSQGCASLSSFDL*PPRSGI Trigger: GATGCCACTCCTTGGTGGCAAGAGGTCAAAACTGCT...CAAGGAAGCACAGCCTTGGGAGCTGTTTGCAGTAGGATTTCCTAGCCGCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | GCCGACAAAACACATTTAAAGGGACAGAAGGAGCGCTaGATCCTGGCTTTTGACCGGAAGGCTCTGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: ADKTHLKGQKER*ILAFDRKALEQ Trigger: CTGTTCCAGAGCCTTCCGGTCAAAAGCCAGGATCCAGCGCTCCTTCTGTCCCTTTAAATGTGTTTTGTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGCAAGGGGCAGCAGACATTGGGCAGAGAGTCATCTTTTGCATCTGTAGAGGCTTACTTTTGAGGTaGAGGCCAGCCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: WEQGAADIGQRVIFCICRGLLLR*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAACCTCAAAAGTAAGCC...TCTACAGATGCAAAAGATGACTCTCTGCCCAATGTCTGCTGCCCCTTGCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | TTTAAAGGGACAGAAGGAGCGCTGGATCCTGGCTTTTaGCCGGAAGGCTCTGGAACAGCAGTTTTGACCTCT | + |
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Preference number: 3 (lower is better) Translates to: FKGTEGALDPGF*PEGSGTAVLTS Trigger: AGAGGTCAAAACTGCTGTTCCAGAGCCTTCCGGTCAAAAGCCAGGATCCAGCGCTCCTTCTGTCCCTTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | GCTCCAATGCACTGGGCTTCTTCCCATCAGCTACACTaGTGGTGTAGAGCGGCTAGGAAATCCTACTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: APMHWASSHQLH*WCRAARKSYCK Trigger: TTTGCAGTAGGATTTCCTAGCCGCTCTACACCATCAGTGTAGCTGATGGGAAGAAGCCCAGTGCATTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | ATTCATACTTTCCTTGGCCTTGAGAGGGCTGTAACTTaGAGATCCATAGAGCGAGGGCTTGGCTATGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: IHTFLGLERAVT*RSIERGLGYEA Trigger: GGCTTCATAGCCAAGCCCTCGCTCTATGGATCTCCAAGTTACAGCCCTCTCAAGGCCAAGGAAAGTATGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | AATGTCTGGGGTGCGACCAAAGCTCAGAAACATCTTTaGGTGTCACAGGGTGTTTGTTTGGGACAGCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: NVWGATKAQKHL*VSQGVCLGQPK Trigger: CTTTGGCTGTCCCAAACAAACACCCTGTGACACCCAAAGATGTTTCTGAGCTTTGGTCGCACCCCAGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | GACTGTGGGATAGGTGATTGTTCTGATGTATCCACTTaGGAAACAAGAACCAAGTTCCCTTCACGCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: DCGIGDCSDVST*ETRTKFPSRPG Trigger: CCCTGGGCGTGAAGGGAACTTGGTTCTTGTTTCTCAAGTGGATACATCAGAACAATCACCTATCCCACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR GCA 72 bp | AGGCAGTCTTACCCACTGAGACATCCCACACCATCTTaGCAGACCAAAGGTGAATATTTTTCTCGACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: RQSYPLRHPTPS*QTKGEYFSRLK Trigger: CTTCAGTCGAGAAAAATATTCACCTTTGGTCTGGCAAGATGGTGTGGGATGTCTCAGTGGGTAAGACTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR-3UTR CAA 90 bp | TCATTCATTCATACTTTCCTTGGCCTTGAGAGGGCTGTAACTTGGAGATCCATACAAGGCTGTGCTTCCTaGATGAAGCCGACAAAACAC | + |
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Preference number: 3 (lower is better) Translates to: SFIHTFLGLERAVTWRSIQGCAS*MKPTKH Trigger: GTGTTTTGTCGGCTTCATCAAGGAAGCACAGCCTTG...TATGGATCTCCAAGTTACAGCCCTCTCAAGGCCAAGGAAAGTATGAATGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | TCATTCTGTGATGAGGGGATGAGACATTGTCACAGTTaGGAAGAATCTAAATCAGGGTACACACCTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SFCDEGMRHCHS*EESKSGYTPGA Trigger: TGCCCCAGGTGTGTACCCTGATTTAGATTCTTCTCAACTGTGACAATGTCTCATCCCCTCATCACAGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR GCA 72 bp | GCTAGGAAATCCTACTGCAAACAGCTCCCAAGGCTGTaGTTCCTTGATGAAGCCGACAAAACACATTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: ARKSYCKQLPRL*FLDEADKTHLK Trigger: CTTTAAATGTGTTTTGTCGGCTTCATCAAGGAAGCACAGCCTTGGGAGCTGTTTGCAGTAGGATTTCCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR GCA 72 bp | CTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGGGGTaGGACCAAAGCTCAGAAACATCTTTGGGTGTCACA | + |
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Preference number: 3 (lower is better) Translates to: LQRRFREWKCLG*DQSSETSLGVT Trigger: TGTGACACCCAAAGATGTTTCTGAGCTTTGGTCGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | TGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTaGGGTGCGACCAAAGCTCAGAAACATCTTTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: CSFKGGLENGNV*GATKAQKHLWV Trigger: CACCCAAAGATGTTTCTGAGCTTTGGTCGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | CATCTTGCCAGACCAAAGGTGAATATTTTTCTCGACTaGAGGAGTTTCTTTGGAATTCTAGGGTGGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: HLARPKVNIFLD*RSFFGILGWLW Trigger: CCACAGCCACCCTAGAATTCCAAAGAAACTCCTTCAGTCGAGAAAAATATTCACCTTTGGTCTGGCAAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | GTGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATaGAAATGTCTGGGGTGCGACCAAAGCTCAGAAACA | + |
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Preference number: 3 (lower is better) Translates to: VFGMFLQRRFRE*KCLGCDQSSET Trigger: TGTTTCTGAGCTTTGGTCGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | GTTTCTAGCTCTCTGGTTCATTCTGTGATGAGGGGATaGGACATTGTCACAGTTGAGAAGAATCTAAATCAG | + |
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Preference number: 3 (lower is better) Translates to: VSSSLVHSVMRG*DIVTVEKNLNQ Trigger: CTGATTTAGATTCTTCTCAACTGTGACAATGTCTCATCCCCTCATCACAGAATGAACCAGAGAGCTAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CCA 72 bp | AAAGGTGAATATTTTTCTCGACTGAAGGAGTTTCTTTaGAATTCTAGGGTGGCTGTGGACAGTATTATAGGA | + |
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Preference number: 3 (lower is better) Translates to: KGEYFSRLKEFL*NSRVAVDSIIG Trigger: TCCTATAATACTGTCCACAGCCACCCTAGAATTCCAAAGAAACTCCTTCAGTCGAGAAAAATATTCACCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR TCA 72 bp | TGCCTGCATAAGGTCATTTCTCACACTGTAGTCGCCTaGGATGTATGTAACAAAAATAATGTATCTAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: CLHKVISHTVVA*DVCNKNNVSKV Trigger: TACTTTAGATACATTATTTTTGTTACATACATCTCAGGCGACTACAGTGTGAGAAATGACCTTATGCAGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGAGGGGCCACATCTCCGGAGGTGTaGGCAGCCCGTAGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: PSSLHAQGNGAWDSKRGATSPEV*AARRDT Trigger: CGTATCCCTACGGGCTGCCCACACCTCCGGAGATGT...GGCCCCTCGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR TCA 90 bp | GAGTGGCATCGCCACAGTTTCTGCTCAGCTCAGTGCTTCATAGGGAGGAGGGGAGCGGGACATGCCCAGTaGGGGTTCCAACCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EWHRHSFCSAQCFIGRRGAGHAQ*GFQPLQ Trigger: CTGCAGGGGTTGGAACCCTCACTGGGCATGTCCCGC...TCCCCTCCTCCCTATGAAGCACTGAGCTGAGCAGAAACTGTGGCGATGCCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGAGGGGCCGCAGCAGAGTCAGGGTaGCCGGGAGTGTTCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: PSSLHAQGNGAWDSKRGAAAESG*PGVFKY Trigger: GTATTTGAACACTCCCGGCCACCCTGACTCTGCTGC...GGCCCCTCGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR GCA 90 bp | AATCCCAGTACCCAGGAGGCAGAGGCAGGCTTACTTTTGAGGTTGAGGCCAGCCGAGGGTTCCAACCCCTaGAGCAGAGTCAGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSTQEAEAGLLLRLRPAEGSNP*SRVRVA Trigger: GGCCACCCTGACTCTGCTGCAGGGGTTGGAACCCTC...GGCTGGCCTCAACCTCAAAAGTAAGCCTGCCTCTGCCTCCTGGGTACTGGGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR GCA 90 bp | AATCCCAGTACCCAGGAGGCAGAGGCAGGCTTACTTTTGAGGTTGAGGCCAGCCGATACGTGTCCACACTaGCAGGGGCAGCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NPSTQEAEAGLLLRLRPADTCPH*QGQQLH Trigger: GTGCAGCTGCTGCCCCTGGCAGTGTGGACACGTATC...GGCTGGCCTCAACCTCAAAAGTAAGCCTGCCTCTGCCTCCTGGGTACTGGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | ACAAGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGGAAGAAGGTCTGCTCTaGCTCCAGCGCATCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTKFPSRPGEWCLGFQAEEGLL*LQRIQG Trigger: CCCCTGGATGCGCTGGAGCCAGAGCAGACCTTCTTC...CGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR GCA 90 bp | AATCCCAGTACCCAGGAGGCAGAGGCAGGCTTACTTTTGAGGTTGAGGCCAGCCGCTTGCAGAGGCGCTTaGCTTGTTTCTTCCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPSTQEAEAGLLLRLRPAACRGA*LVSSCG Trigger: CCCGCAGGAAGAAACAAGGCAAGCGCCTCTGCAAGC...GGCTGGCCTCAACCTCAAAAGTAAGCCTGCCTCTGCCTCCTGGGTACTGGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | AATCCCAGTACCCAGGAGGCAGAGGCAGGCTTACTTTTGAGGTTGAGGCCAGCCAGAGGGTGGCTGCAGTaGAGGGGACTAGGTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPSTQEAEAGLLLRLRPARGWLQ*RGLGVN Trigger: GTTCACACCTAGTCCCCTCCACTGCAGCCACCCTCT...GGCTGGCCTCAACCTCAAAAGTAAGCCTGCCTCTGCCTCCTGGGTACTGGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS-3UTR CCA 90 bp | TACACTGATGGTGTAGAGCGGCTAGGAAATCCTACTGCAAACAGCTCCCAAGGCAGGCAAGGTGGCCCCTaGGGAGTACTCACCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTDGVERLGNPTANSSQGRQGGP*GVLTPV Trigger: GACAGGGGTGAGTACTCCCCAGGGGCCACCTTGCCT...GCCTTGGGAGCTGTTTGCAGTAGGATTTCCTAGCCGCTCTACACCATCAGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | AATCCCAGTACCCAGGAGGCAGAGGCAGGCTTACTTTTGAGGTTGAGGCCAGCCGGAGAGGGTGGTAGGTaGCATGGGAGTAATAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPSTQEAEAGLLLRLRPAGEGGR*HGSNRL Trigger: CAGCCTATTACTCCCATGCCACCTACCACCCTCTCC...GGCTGGCCTCAACCTCAAAAGTAAGCCTGCCTCTGCCTCCTGGGTACTGGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | AGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGAGGAGCTGTTGTAATACGTaGCCGTGGCATCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTKFPSRPGEWCLGFQARSCCNT*PWHQPG Trigger: TCCTGGCTGATGCCACGGCCACGTATTACAACAGCT...CCTCGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCATCGCCACAGTTTCTGCTCAGCTCAGTGCTTCATAGGGAGGAGGGGAATGGGAGTAATAGGCTaGAGATGGGGGACATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWHRHSFCSAQCFIGRRGMGVIG*RWGTSR Trigger: TCTGGATGTCCCCCATCTCCAGCCTATTACTCCCAT...TCCCCTCCTCCCTATGAAGCACTGAGCTGAGCAGAAACTGTGGCGATGCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| 3UTR CAA 72 bp | TTGACCGGAAGGCTCTGGAACAGCAGTTTTGACCTCTaGCCACCAAGGAGTGGCATCGCCACAGTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGRLWNSSFDL*PPRSGIATVSA Trigger: AGCAGAAACTGTGGCGATGCCACTCCTTGGTGGCAAGAGGTCAAAACTGCTGTTCCAGAGCCTTCCGGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR TCA 90 bp | GCTATGAAGCCAACCCTCACTGTACAGGAGAGAATAGTCAGGGCTGGTCAAGCCTGTCAGCGCCTTCCATaGCTTTCCCAGCATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AMKPTLTVQERIVRAGQACQRLP*LSQHLA Trigger: AGCAAGATGCTGGGAAAGTCATGGAAGGCGCTGACA...GGCTTGACCAGCCCTGACTATTCTCTCCTGTACAGTGAGGGTTGGCTTCATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS-3UTR GCA 90 bp | TACACTGATGGTGTAGAGCGGCTAGGAAATCCTACTGCAAACAGCTCCCAAGGCGTCCGGGTTCTGCACTaGCAGACGTTTCCTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YTDGVERLGNPTANSSQGVRVLH*QTFPLI Trigger: GATGAGAGGAAACGTCTGGCAGTGCAGAACCCGGAC...GCCTTGGGAGCTGTTTGCAGTAGGATTTCCTAGCCGCTCTACACCATCAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCATCGCCACAGTTTCTGCTCAGCTCAGTGCTTCATAGGGAGGAGGGGAGTAATAGGCTGGAGATaGGGGACATCCAGAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWHRHSFCSAQCFIGRRGVIGWR*GTSRNR Trigger: TCTGTTTCTGGATGTCCCCCATCTCCAGCCTATTAC...TCCCCTCCTCCCTATGAAGCACTGAGCTGAGCAGAAACTGTGGCGATGCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS-3UTR CCA 90 bp | ATAGGAAAGCAGAAAACCTGGGTCCTTGGGCAGTCATTCATTCATACTTTCCTTAGGGTGCTCCGGAGGTaGGGACAGCTGGCCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IGKQKTWVLGQSFIHTFLRVLRR*GQLAQV Trigger: CACCTGGGCCAGCTGTCCCCACCTCCGGAGCACCCT...AAGGAAAGTATGAATGAATGACTGCCCAAGGACCCAGGTTTTCTGCTTTCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | TGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGGGGTGCGCCTGTGGGAGTCCCCTaGGAGAGCGGGACATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLVCSFKGGLENGNVWGAPVGVP*ESGTCP Trigger: TGGGCATGTCCCGCTCTCCCAGGGGACTCCCACAGG...CGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR TCA 90 bp | TGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGGGGTGCGCACGAGAGAGGGAGCTaGGGAGGAAGCCAGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLVCSFKGGLENGNVWGAHERGS*GGSQGP Trigger: TGGACCCTGGCTTCCTCCTCAGCTCCCTCTCTCGTG...CGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR GCA 90 bp | ACGTGCATTTGGAAGTCAGAATACAACTTGCAGGAGTCAGTTCTCTTCTTCCACTGCAGGTCCGGGTTCTaGACTGCCAGACGTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCIWKSEYNLQESVLFFHCRSGF*TARRFL Trigger: GAGGAAACGTCTGGCAGTGCAGAACCCGGACCTGCA...GTGGAAGAAGAGAACTGACTCCTGCAAGTTGTATTCTGACTTCCAAATGCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR GCA 90 bp | TGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGGGGTGCGGACGAGAAGAAGGTCTaGTCTGGCTCCAGCGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CLVCSFKGGLENGNVWGADEKKV*SGSSAS Trigger: GGATGCGCTGGAGCCAGAGCAGACCTTCTTCTCGTC...CGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGAAATGTCTGGGGTGCGTCAGGCAGCGTGTTCTaGTCACGAGAGAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLVCSFKGGLENGNVWGASGSVF*SREREL Trigger: CAGCTCCCTCTCTCGTGACCAGAACACGCTGCCTGA...CGCACCCCAGACATTTCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CAA 72 bp | CAGGGGCACACGTGCATTTGGAAGTCAGAATACAACTaGCAGGAGTCAGTTCTCTTCTTCCACCATGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHTCIWKSEYN*QESVLFFHHVG Trigger: GCCTACATGGTGGAAGAAGAGAACTGACTCCTGCAAGTTGTATTCTGACTTCCAAATGCACGTGTGCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR TCA 90 bp | ATAGGAAAGCAGAAAACCTGGGTCCTTGGGCAGTCATTCATTCATACTTTCCTTATGCTCCTCCTGACATaGGGACGAGAAGAAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGKQKTWVLGQSFIHTFLMLLLT*GREEGL Trigger: CAGACCTTCTTCTCGTCCTCATGTCAGGAGGAGCAT...AAGGAAAGTATGAATGAATGACTGCCCAAGGACCCAGGTTTTCTGCTTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CCA 90 bp | ATAGGAAAGCAGAAAACCTGGGTCCTTGGGCAGTCATTCATTCATACTTTCCTTTGTAATACGTGGCCGTaGCATCAGCCAGGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGKQKTWVLGQSFIHTFLCNTWP*HQPGLR Trigger: TCTCAGTCCTGGCTGATGCCACGGCCACGTATTACA...AAGGAAAGTATGAATGAATGACTGCCCAAGGACCCAGGTTTTCTGCTTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CAA 72 bp | TGTCCAAGGGCAGACAAGAGTCTGTTAGCTCAGTGTTaGGTATGTTCCTTCAAAGGAGGTTTAGAGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPRADKSLLAQC*VCSFKGGLENG Trigger: TCCATTCTCTAAACCTCCTTTGAAGGAACATACCAAACACTGAGCTAACAGACTCTTGTCTGCCCTTGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR GCA 90 bp | ACGTGCATTTGGAAGTCAGAATACAACTTGCAGGAGTCAGTTCTCTTCTTCCACACTGATCAAATTCATTaGGATCCATGTCTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TCIWKSEYNLQESVLFFHTDQIH*DPCLPE Trigger: TTCTGGGAGACATGGATCGCAATGAATTTGATCAGT...GTGGAAGAAGAGAACTGACTCCTGCAAGTTGTATTCTGACTTCCAAATGCACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR TCA 90 bp | TCATTCATTCATACTTTCCTTGGCCTTGAGAGGGCTGTAACTTGGAGATCCATAGGAGTGTTCAAATACTaGTCAAATTCATTGCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SFIHTFLGLERAVTWRSIGVFKY*SNSLRS Trigger: GGATCGCAATGAATTTGATCAGTATTTGAACACTCC...TATGGATCTCCAAGTTACAGCCCTCTCAAGGCCAAGGAAAGTATGAATGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| 3UTR CAA 72 bp | ACAAGTTCTAATCTGATTTTGCTTTCAGTGATGCAGTaGAACATACTCATTAATTTTCCGAACCAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSNLILLSVMQ*NILINFPNQGR Trigger: TCTACCCTGGTTCGGAAAATTAATGAGTATGTTCAACTGCATCACTGAAAGCAAAATCAGATTAGAACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS TCA 90 bp | GGCATTCATGGGCCGCCGGATCCGGCTTTCCGAACTCTTGTCCCCTaGAGGTCGGGGGACGGCGGGCGGCGACAGCCCATCCGACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GIHGPPDPAFRTLVP*RSGDGGRRQPIRQL Trigger: GAGCTGTCGGATGGGCTGTCGCCGCCCGCCGTCCCCCGACCTTCAGGGGACAAGAGTTCGGAAAGCCGGATCCGGCGGCCCATGAATGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS GCA 90 bp | GGGCAGCCCGTAGGGATACGTGTCCACACTGCCAGGGGCAGCAGCTaGACCTTCGCGGTAGCAGCTGTGCAGTCCAGGCAAGGTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GQPVGIRVHTARGSS*TFAVAAVQSRQGGP Trigger: GGGGCCACCTTGCCTGGACTGCACAGCTGCTACCGCGAAGGTGCAGCTGCTGCCCCTGGCAGTGTGGACACGTATCCCTACGGGCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS GCA 90 bp | CTGGTCTCTGTAGGGCCTGTGGGAGTCCCCTGGGAGAGCGGGACATaGCCAGTGAGGGTTCCAACCCCTGCAGCAGAGTCAGGGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LVSVGPVGVPWESGT*PVRVPTPAAESGWP Trigger: CGGCCACCCTGACTCTGCTGCAGGGGTTGGAACCCTCACTGGGCATGTCCCGCTCTCCCAGGGGACTCCCACAGGCCCTACAGAGACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS CCA 90 bp | TCTGCTCTGGCTCCAGCGCATCCAGGGGCGACATCTCCGGAGGTGTaGGCAGCCCGTAGGGATACGTGTCCACACTGCCAGGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SALAPAHPGATSPEV*AARRDTCPHCQGQQ Trigger: CTGCTGCCCCTGGCAGTGTGGACACGTATCCCTACGGGCTGCCCACACCTCCGGAGATGTCGCCCCTGGATGCGCTGGAGCCAGAGCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS GCA 90 bp | ACATCTCCGGAGGTGTGGGCAGCCCGTAGGGATACGTGTCCACACTaGCAGGGGCAGCAGCTGCACCTTCGCGGTAGCAGCTGTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSPEVWAARRDTCPH*QGQQLHLRGSSCAV Trigger: GACTGCACAGCTGCTACCGCGAAGGTGCAGCTGCTGCCCCTGGCAGTGTGGACACGTATCCCTACGGGCTGCCCACACCTCCGGAGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS CCA 90 bp | AGGACTGAGATGAGGCTGGTCTCTGTAGGGCCTGTGGGAGTCCCCTaGGAGAGCGGGACATGCCCAGTGAGGGTTCCAACCCCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTEMRLVSVGPVGVP*ESGTCPVRVPTPAA Trigger: TGCTGCAGGGGTTGGAACCCTCACTGGGCATGTCCCGCTCTCCCAGGGGACTCCCACAGGCCCTACAGAGACCAGCCTCATCTCAGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CAA 90 bp | CAAGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGACCAGGGTCCACGCGCTaGCAGAGGCGCTTGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QEPSSLHAQGNGAWDSKRPGSTR*QRRLPC Trigger: ACAAGGCAAGCGCCTCTGCAAGCGCGTGGACCCTGG...TCGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CAA 90 bp | GAGTGGCATCGCCACAGTTTCTGCTCAGCTCAGTGCTTCATAGGGAGGAGGGGACGGCTTTCCGAACTCTaGTCCCCTGAAGGTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EWHRHSFCSAQCFIGRRGRLSEL*SPEGRG Trigger: CCCCCGACCTTCAGGGGACAAGAGTTCGGAAAGCCG...TCCCCTCCTCCCTATGAAGCACTGAGCTGAGCAGAAACTGTGGCGATGCCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS GCA 90 bp | AGTCCCCTGGGAGAGCGGGACATGCCCAGTGAGGGTTCCAACCCCTaGAGCAGAGTCAGGGTGGCCGGGAGTGTTCAAATACTGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPLGERDMPSEGSNP*SRVRVAGSVQILIK Trigger: TTTGATCAGTATTTGAACACTCCCGGCCACCCTGACTCTGCTGCAGGGGTTGGAACCCTCACTGGGCATGTCCCGCTCTCCCAGGGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS-3UTR CAA 90 bp | ACAAGAACCAAGTTCCCTTCACGCCCAGGGGAATGGTGCCTGGGATTCCAAGCGCGCTTGCAGAGGCGCTaGCCTTGTTTCTTCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRTKFPSRPGEWCLGFQARLQRR*PCFFLR Trigger: CCGCAGGAAGAAACAAGGCAAGCGCCTCTGCAAGCG...CGCTTGGAATCCCAGGCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS TCA 90 bp | AATTCATTGCGATCCATGTCTCCCAGAAGTTCCACCTGGCTTAGCTaGTCCAAGGTGTCAAAGCCAGGGTGCTCCGGAGGTGGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSLRSMSPRSSTWLS*SKVSKPGCSGGGDS Trigger: GCTGTCCCCACCTCCGGAGCACCCTGGCTTTGACACCTTGGATCAGCTAAGCCAGGTGGAACTTCTGGGAGACATGGATCGCAATGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS-3UTR CAA 90 bp | GCTATGAAGCCAACCCTCACTGTACAGGAGAGAATAGTCAGGGCTGGTCAAGCCGACTTTCCCAGCATCTaGCTGAGCTCCGCGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AMKPTLTVQERIVRAGQADFPSI*LSSALC Trigger: GCACAACGCGGAGCTCAGCAAGATGCTGGGAAAGTC...GGCTTGACCAGCCCTGACTATTCTCTCCTGTACAGTGAGGGTTGGCTTCATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS TCA 90 bp | CCAACCCCTGCAGCAGAGTCAGGGTGGCCGGGAGTGTTCAAATACTaGTCAAATTCATTGCGATCCATGTCTCCCAGAAGTTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTPAAESGWPGVFKY*SNSLRSMSPRSSTW Trigger: CCAGGTGGAACTTCTGGGAGACATGGATCGCAATGAATTTGATCAGTATTTGAACACTCCCGGCCACCCTGACTCTGCTGCAGGGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS TCA 72 bp | GGGCCGCCGGATCCGGCTTTCCGAACTCTTGTCCCCTaGAGGTCGGGGGACGGCGGGCGGCGACAGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: GPPDPAFRTLVP*RSGDGGRRQPI Trigger: GATGGGCTGTCGCCGCCCGCCGTCCCCCGACCTTCAGGGGACAAGAGTTCGGAAAGCCGGATCCGGCGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS CAA 72 bp | GCATTCATGGGCCGCCGGATCCGGCTTTCCGAACTCTaGTCCCCTGAAGGTCGGGGGACGGCGGGCGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFMGRRIRLSEL*SPEGRGTAGGD Trigger: GTCGCCGCCCGCCGTCCCCCGACCTTCAGGGGACAAGAGTTCGGAAAGCCGGATCCGGCGGCCCATGAATGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS GCA 72 bp | GAGGTGTGGGCAGCCCGTAGGGATACGTGTCCACACTaGCAGGGGCAGCAGCTGCACCTTCGCGGTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EVWAARRDTCPH*QGQQLHLRGSS Trigger: GCTGCTACCGCGAAGGTGCAGCTGCTGCCCCTGGCAGTGTGGACACGTATCCCTACGGGCTGCCCACACCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS CCA 72 bp | GCTCCAGCGCATCCAGGGGCGACATCTCCGGAGGTGTaGGCAGCCCGTAGGGATACGTGTCCACACTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: APAHPGATSPEV*AARRDTCPHCQ Trigger: CTGGCAGTGTGGACACGTATCCCTACGGGCTGCCCACACCTCCGGAGATGTCGCCCCTGGATGCGCTGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS GCA 72 bp | GTAGGGCCTGTGGGAGTCCCCTGGGAGAGCGGGACATaGCCAGTGAGGGTTCCAACCCCTGCAGCAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VGPVGVPWESGT*PVRVPTPAAES Trigger: TGACTCTGCTGCAGGGGTTGGAACCCTCACTGGGCATGTCCCGCTCTCCCAGGGGACTCCCACAGGCCCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
||
| CDS CCA 72 bp | ATGAGGCTGGTCTCTGTAGGGCCTGTGGGAGTCCCCTaGGAGAGCGGGACATGCCCAGTGAGGGTTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: MRLVSVGPVGVP*ESGTCPVRVPT Trigger: GGTTGGAACCCTCACTGGGCATGTCCCGCTCTCCCAGGGGACTCCCACAGGCCCTACAGAGACCAGCCTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS GCA 72 bp | GGAGAGCGGGACATGCCCAGTGAGGGTTCCAACCCCTaGAGCAGAGTCAGGGTGGCCGGGAGTGTTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: GERDMPSEGSNP*SRVRVAGSVQI Trigger: TATTTGAACACTCCCGGCCACCCTGACTCTGCTGCAGGGGTTGGAACCCTCACTGGGCATGTCCCGCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS CCA 72 bp | CCTGGGGATTGGCCAAGGGCTAAAGAACCTAGAGGGTaGCTGCAGTGGAGGGGACTAGGTGTGAACTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: PGDWPRAKEPRG*LQWRGLGVNSG Trigger: ACCGGAGTTCACACCTAGTCCCCTCCACTGCAGCCACCCTCTAGGTTCTTTAGCCCTTGGCCAATCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS TCA 72 bp | CGATCCATGTCTCCCAGAAGTTCCACCTGGCTTAGCTaGTCCAAGGTGTCAAAGCCAGGGTGCTCCGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RSMSPRSSTWLS*SKVSKPGCSGG Trigger: ACCTCCGGAGCACCCTGGCTTTGACACCTTGGATCAGCTAAGCCAGGTGGAACTTCTGGGAGACATGGATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS CCA 72 bp | CCAGAAACAGAGGACATCATAGAAACCCCTGGGGATTaGCCAAGGGCTAAAGAACCTAGAGGGTGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PETEDIIETPGD*PRAKEPRGWLQ Trigger: CTGCAGCCACCCTCTAGGTTCTTTAGCCCTTGGCCAATCCCCAGGGGTTTCTATGATGTCCTCTGTTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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| CDS TCA 72 bp | GCAGCAGAGTCAGGGTGGCCGGGAGTGTTCAAATACTaGTCAAATTCATTGCGATCCATGTCTCCCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AAESGWPGVFKY*SNSLRSMSPRS Trigger: ACTTCTGGGAGACATGGATCGCAATGAATTTGATCAGTATTTGAACACTCCCGGCCACCCTGACTCTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079652.7 |
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