RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOX6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051910

Ensembl transcript IDs: ENSMUST00000072804.11, ENSMUST00000106612.8, ENSMUST00000166207.3, ENSMUST00000166877.8, ENSMUST00000169129.8, ENSMUST00000205405.2, ENSMUST00000205479.2, ENSMUST00000206034.2, ENSMUST00000206123.2, ENSMUST00000206369.2

Found 1052 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATaGCGGGTCCAAAGTAGACCCCGTGTGGCCCATGGTCCTTGGGCT +
Preference number: 1 (lower is better)
Translates to: WMCQLGPGSSIKVTE*RVQSRPRVAHGPWA
Trigger: AGCCCAAGGACCATGGGCCACACGGGGTCTACTTTGGACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 90 bp GTAGTGAGAGGCGGTCTCAGACAGGGGAGTCCACCGTGTGGTGTCTaGTGTGGTGATTGCTCTGATCTATGTCATCCCACGCCACACACT +
Preference number: 1 (lower is better)
Translates to: VVRGGLRQGSPPCGV*CGDCSDLCHPTPHT
Trigger: AGTGTGTGGCGTGGGATGACATAGATCAGAGCAATCACCACACCAGACACCACACGGTGGACTCCCCTGTCTGAGACCGCCTCTCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 90 bp GCGGGTTCCAGACTGTGTGAGAAGCAGGTAGGGGTCCTGCTGTCTTaGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGC +
Preference number: 1 (lower is better)
Translates to: AGSRLCEKQVGVLLS*LRVDTASLKLNVMG
Trigger: GCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGACAGCAGGACCCCTACCTGCTTCTCACACAGTCTGGAACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 90 bp GGTCTCAGACAGGGGAGTCCACCGTGTGGTGTCTGGTGTGGTGATTaGTCTGATCTATGTCATCCCACGCCACACACTGATGGCACATCA +
Preference number: 1 (lower is better)
Translates to: GLRQGSPPCGVWCGD*SDLCHPTPHTDGTS
Trigger: TGATGTGCCATCAGTGTGTGGCGTGGGATGACATAGATCAGAGCAATCACCACACCAGACACCACACGGTGGACTCCCCTGTCTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 90 bp TCTTCAGGGGAGCTGTGGGTACCTCTAGCATCTGTCCCTAGGAGCTaGCAGCTCACCATTGCTTCCCTTGCCTGTGGTTTCCTTTCTTCC +
Preference number: 1 (lower is better)
Translates to: SSGELWVPLASVPRS*QLTIASLACGFLSS
Trigger: GGAAGAAAGGAAACCACAGGCAAGGGAAGCAATGGTGAGCTGCCAGCTCCTAGGGACAGATGCTAGAGGTACCCACAGCTCCCCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 90 bp CCACACCTGAATTTAGAAGCTGGCTTGGGAGTCAGTGTCAGGCCTTaGAGAAGGGAGCTGTTGTCAGCCTTGGAGGAGGAATGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: PHLNLEAGLGVSVRP*RRELLSALEEECRL
Trigger: CAGCCTGCATTCCTCCTCCAAGGCTGACAACAGCTCCCTTCTCCAAGGCCTGACACTGACTCCCAAGCCAGCTTCTAAATTCAGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp GTCCTTGGGCTTCAGAGTGGCTGTGAGAGGCTCCTTGACTGGCAGTaGCCACTGCTGACTCTCACTGCTGAATGGAACTCAGGTTCTACT +
Preference number: 1 (lower is better)
Translates to: VLGLQSGCERLLDWQ*PLLTLTAEWNSGST
Trigger: AGTAGAACCTGAGTTCCATTCAGCAGTGAGAGTCAGCAGTGGTCACTGCCAGTCAAGGAGCCTCTCACAGCCACTCTGAAGCCCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR TCA 90 bp TCCGGCTCACTCACACAGGGCAAATGTCCAGAGGAGGCCAGCATTTaGCAAGTGGAACAGCACTGGCAGCCCACACCTGAATTTAGAAGC +
Preference number: 1 (lower is better)
Translates to: SGSLTQGKCPEEASI*QVEQHWQPTPEFRS
Trigger: GCTTCTAAATTCAGGTGTGGGCTGCCAGTGCTGTTCCACTTGTCAAATGCTGGCCTCCTCTGGACATTTGCCCTGTGTGAGTGAGCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 90 bp ATTGCTGAGCTCCTGGCTCAGAGACTGTATACTAGAGATGTAGCCTaGCTCTGCAGGAGCCTGGTGTCAGCCCTAGAGGGATCACACCTT +
Preference number: 1 (lower is better)
Translates to: IAELLAQRLYTRDVA*LCRSLVSALEGSHL
Trigger: AAGGTGTGATCCCTCTAGGGCTGACACCAGGCTCCTGCAGAGCCAGGCTACATCTCTAGTATACAGTCTCTGAGCCAGGAGCTCAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp AGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTaGGCTGGGGGACCAGCGGGTTCCAGACTGTGTGAGAAGCAGGTA +
Preference number: 1 (lower is better)
Translates to: SVCNSSASYLEIGGV*AGGPAGSRLCEKQV
Trigger: TACCTGCTTCTCACACAGTCTGGAACCCGCTGGTCCCCCAGCTCAGACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 90 bp CACTCACACAGGGCAAATGTCCAGAGGAGGCCAGCATTTGACAAGTaGAACAGCACTGGCAGCCCACACCTGAATTTAGAAGCTGGCTTG +
Preference number: 1 (lower is better)
Translates to: HSHRANVQRRPAFDK*NSTGSPHLNLEAGL
Trigger: CAAGCCAGCTTCTAAATTCAGGTGTGGGCTGCCAGTGCTGTTCCACTTGTCAAATGCTGGCCTCCTCTGGACATTTGCCCTGTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 90 bp CCCTTAATTGTGAGGCAGAGCTGGAAAGCCCTGGACAAGTCCCACTaGAGGGTGTTCCATGCTGAGTTTGTCTCATGCCAATACTGTCCA +
Preference number: 1 (lower is better)
Translates to: PLIVRQSWKALDKSH*RVFHAEFVSCQYCP
Trigger: TGGACAGTATTGGCATGAGACAAACTCAGCATGGAACACCCTCCAGTGGGACTTGTCCAGGGCTTTCCAGCTCTGCCTCACAATTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206034.2
3UTR GCA 90 bp CTAGAGTTTCAAGGGTCACACCCACAGTGTTGCTATGGGAACCAATaGACAGTACCTTGGCAACAGAGTTGTAGTTGTCCGGACAGCCCT +
Preference number: 1 (lower is better)
Translates to: LEFQGSHPQCCYGNQ*TVPWQQSCSCPDSP
Trigger: AGGGCTGTCCGGACAACTACAACTCTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCCTTGAAACTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp TTCAGAGTGGCTGTGAGAGGCTCCTTGACTGGCAGTGACCACTGCTaGCTCTCACTGCTGAATGGAACTCAGGTTCTACTGTTTACTGAA +
Preference number: 1 (lower is better)
Translates to: FRVAVRGSLTGSDHC*LSLLNGTQVLLFTE
Trigger: TTCAGTAAACAGTAGAACCTGAGTTCCATTCAGCAGTGAGAGTCAGCAGTGGTCACTGCCAGTCAAGGAGCCTCTCACAGCCACTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR GCA 90 bp GTGTGCCGAATGTCCCTAGAGTTTCAAGGGTCACACCCACAGTGTTaGTATGGGAACCAATGCACAGTACCTTGGCAACAGAGTTGTAGT +
Preference number: 1 (lower is better)
Translates to: VCRMSLEFQGSHPQC*YGNQCTVPWQQSCS
Trigger: ACTACAACTCTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCCTTGAAACTCTAGGGACATTCGGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 90 bp GGGCACAGCCAATTGGTTGCCGCTTTCTCAGTAAAGAGGAAGACCTaGCTGGCCATCATCTCAACTGATTCTTCTAGACACAGATCTTTG +
Preference number: 1 (lower is better)
Translates to: GHSQLVAAFSVKRKT*LAIISTDSSRHRSL
Trigger: CAAAGATCTGTGTCTAGAAGAATCAGTTGAGATGATGGCCAGCCAGGTCTTCCTCTTTACTGAGAAAGCGGCAACCAATTGGCTGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 90 bp GAATCCCTGTTCCTCTGCCCTCGAGAGGGCCAGTTTATAGGTGTTTaGAAAGGTCAGGATGGGGACAAAGAACTATGCTTGCAATGTCAT +
Preference number: 1 (lower is better)
Translates to: ESLFLCPREGQFIGV*KGQDGDKELCLQCH
Trigger: ATGACATTGCAAGCATAGTTCTTTGTCCCCATCCTGACCTTTCCAAACACCTATAAACTGGCCCTCTCGAGGGCAGAGGAACAGGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp TACAATGAAGGCTGGGTTTTAAAAGGAGACAGAGTAAATGCTCTCTaGCCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAAC +
Preference number: 1 (lower is better)
Translates to: YNEGWVLKGDRVNAL*PRKTMEDAHQQTCN
Trigger: GTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTCAGAGAGCATTTACTCTGTCTCCTTTTAAAACCCAGCCTTCATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 90 bp TTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTaGACTTGTCCGGTTTCACAATACGAAATCCTCAGTTGTTTTCTA +
Preference number: 1 (lower is better)
Translates to: FRGLLNMFYMQPLTP*TCPVSQYEILSCFL
Trigger: TAGAAAACAACTGAGGATTTCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 90 bp ACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCACGCACTGTaGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCAGATTCCT +
Preference number: 1 (lower is better)
Translates to: TDGTSRGKHNWVHAL*QPCSFLTISCLQIP
Trigger: AGGAATCTGGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 90 bp AGAAACATCATCTACTCGCCTTCCACCAGCTTCTTTGTCAATAGATaGGAATCTGCAGGAAGCCTTGACTTTTCCATCCCTCCCAGAATC +
Preference number: 1 (lower is better)
Translates to: RNIIYSPSTSFFVNR*ESAGSLDFSIPPRI
Trigger: GATTCTGGGAGGGATGGAAAAGTCAAGGCTTCCTGCAGATTCCCATCTATTGACAAAGAAGCTGGTGGAAGGCGAGTAGATGATGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp CCACAGAACTATCTGGACAGATGGGTATGGATTCCCAAAGCAAGCTaGCTTTCTTTTAACTCTGCTGGAAACTCAGTGTGTGCAACTCCT +
Preference number: 1 (lower is better)
Translates to: PQNYLDRWVWIPKAS*LSFNSAGNSVCATP
Trigger: AGGAGTTGCACACACTGAGTTTCCAGCAGAGTTAAAAGAAAGTCAGCTTGCTTTGGGAATCCATACCCATCTGTCCAGATAGTTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp CAGGCTAGAAGGTATCAAATAGCTCATGATGCAAACCTGAAAGGTTaGGAGAGTGTTTGCGAAAACAACATGGCCTGGAATTTGCCAGCG +
Preference number: 1 (lower is better)
Translates to: QARRYQIAHDANLKG*ESVCENNMAWNLPA
Trigger: CGCTGGCAAATTCCAGGCCATGTTGTTTTCGCAAACACTCTCTCAACCTTTCAGGTTTGCATCATGAGCTATTTGATACCTTCTAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 90 bp CCTGGCTGGCCATCATCTCAACTGATTCTTCTAGACACAGATCTTTaGTGTTGTTGGCACTTGGTACAGGACTTCTATGGCTCAAAACTA +
Preference number: 1 (lower is better)
Translates to: PGWPSSQLILLDTDL*CCWHLVQDFYGSKL
Trigger: TAGTTTTGAGCCATAGAAGTCCTGTACCAAGTGCCAACAACAGCAAAGATCTGTGTCTAGAAGAATCAGTTGAGATGATGGCCAGCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp AACTGTGTATGCACAAAATTTAGATTTGAATACAGCATCACTGTCTaGGCCAATGAAAGAGGCATTCATACCCAGTCATTCCCGGACAGC +
Preference number: 1 (lower is better)
Translates to: NCVCTKFRFEYSITV*ANERGIHTQSFPDS
Trigger: GCTGTCCGGGAATGACTGGGTATGAATGCCTCTTTCATTGGCTCAGACAGTGATGCTGTATTCAAATCTAAATTTTGTGCATACACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 90 bp TTAATCTTAAGAACAAACATCCCTAGCAGTACCTTAAACAGCTTATaGAGAGCACTCACAGCTAATGACTCAGCTGGTCATCTCTTGGCT +
Preference number: 1 (lower is better)
Translates to: LILRTNIPSSTLNSL*RALTANDSAGHLLA
Trigger: AGCCAAGAGATGACCAGCTGAGTCATTAGCTGTGAGTGCTCTCCATAAGCTGTTTAAGGTACTGCTAGGGATGTTTGTTCTTAAGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR GCA 90 bp GTCATGATTTTCAATCTACTTTTGCTGTGCAGATGCACGATCATGTaGAGCATTAGAAACAACATGATTGGCAAGAGGAATACCTGCTCA +
Preference number: 1 (lower is better)
Translates to: VMIFNLLLLCRCTIM*SIRNNMIGKRNTCS
Trigger: TGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCTAATGCTGCACATGATCGTGCATCTGCACAGCAAAAGTAGATTGAAAATCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 90 bp TATGCTTGCAATGTCATGATTTTCAATCTACTTTTGCTGTGCAGATaGACGATCATGTGCAGCATTAGAAACAACATGATTGGCAAGAGG +
Preference number: 1 (lower is better)
Translates to: YACNVMIFNLLLLCR*TIMCSIRNNMIGKR
Trigger: CCTCTTGCCAATCATGTTGTTTCTAATGCTGCACATGATCGTGCATCTGCACAGCAAAAGTAGATTGAAAATCATGACATTGCAAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 90 bp GAAGCTAAATGTGATGGGCCAGCTTTTAGTGCGGAGCAACACATATaGATAGAGAACAGAAAGAAGATTCATAACTTATATGTCACTAGG +
Preference number: 1 (lower is better)
Translates to: EAKCDGPAFSAEQHI*IENRKKIHNLYVTR
Trigger: CCTAGTGACATATAAGTTATGAATCTTCTTTCTGTTCTCTATTCATATGTGTTGCTCCGCACTAAAAGCTGGCCCATCACATTTAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 90 bp AAGAACTATGCTTGCAATGTCATGATTTTCAATCTACTTTTGCTGTaGAGATGCACGATCATGTGCAGCATTAGAAACAACATGATTGGC +
Preference number: 1 (lower is better)
Translates to: KNYACNVMIFNLLLL*RCTIMCSIRNNMIG
Trigger: GCCAATCATGTTGTTTCTAATGCTGCACATGATCGTGCATCTGCACAGCAAAAGTAGATTGAAAATCATGACATTGCAAGCATAGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTAGGCCGAGCTGGAGCTaGCACAGAGCGTTCCTACAC +
Preference number: 2 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPARPSWS*HRAFLH
Trigger: GTGTAGGAACGCTCTGTGTCAGCTCCAGCTCGGCCT...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp CCCACACCTGAATTTAGAAGCTGGCTTGGGAGTCAGTGTCAGGCCTaGGAGAAGGGAGCTGTTGTCAGCCTTGGAGGAGGAATGCAGGCT +
Preference number: 2 (lower is better)
Translates to: PTPEFRSWLGSQCQA*EKGAVVSLGGGMQA
Trigger: AGCCTGCATTCCTCCTCCAAGGCTGACAACAGCTCCCTTCTCCAAGGCCTGACACTGACTCCCAAGCCAGCTTCTAAATTCAGGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp AAGTGGAACAGCACTGGCAGCCCACACCTGAATTTAGAAGCTGGCTaGGGAGTCAGTGTCAGGCCTTGGAGAAGGGAGCTGTTGTCAGCC +
Preference number: 2 (lower is better)
Translates to: KWNSTGSPHLNLEAG*GVSVRPWRRELLSA
Trigger: GGCTGACAACAGCTCCCTTCTCCAAGGCCTGACACTGACTCCCAAGCCAGCTTCTAAATTCAGGTGTGGGCTGCCAGTGCTGTTCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGCCCACTGAAGGGCTCTaGGTAAGGCCCCCTGAAAAC +
Preference number: 2 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQPTEGL*VRPPEN
Trigger: GTTTTCAGGGGGCCTTACTCAGAGCCCTTCAGTGGG...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGGAGGTGGTCATCCTTaGTTGCTGAGCTCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQGGGHP*LLSSWL
Trigger: GAGCCAGGAGCTCAGCAATCAAGGATGACCACCTCC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTATGGCTAGAAGTTACTaGCCCCCAGTGCTGAGGCCG +
Preference number: 2 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAMARSY*PPVLRP
Trigger: CGGCCTCAGCACTGGGGGCCAGTAACTTCTAGCCAT...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCCCGGCACAGCATACCTaGGTGAGAATGTTTAACCCC +
Preference number: 2 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVPAQHT*VRMFNP
Trigger: GGGGTTAAACATTCTCACTCAGGTATGCTGTGCCGG...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGACACCTCTCAGCCCTaGAGCATGTCTCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPADTSQP*SMSQSP
Trigger: TGGAGACTGAGACATGCTGCAGGGCTGAGAGGTGTC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATGACCCAAGGTCATGGTaGCTCCTGGGGGCATACATG +
Preference number: 2 (lower is better)
Translates to: DQERQWRTHTSRPATYSDDPRSW*LLGAYM
Trigger: CATGTATGCCCCCAGGAGTCACCATGACCTTGGGTC...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTGGGTTCCAGACTGTGTaGGAAGCAGGTAGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFGFQTV*EAGRGP
Trigger: AGGACCCCTACCTGCTTCTCACACAGTCTGGAACCC...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCGGAGCCACAAATGCATaGGGGCTCTTTAAGAACTTT +
Preference number: 2 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVGATNA*GLFKNF
Trigger: AAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCC...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCGCACTGTGGCAGCCTTaGTCATTCCTTACAATATCT +
Preference number: 2 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVALWQP*SFLTIS
Trigger: AGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGC...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTCACCATTGCTTCCCTTaGCTGTGGTTTCCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAHHCFP*LWFPFF
Trigger: GAAGAAAGGAAACCACAGGCAAGGGAAGCAATGGTG...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGCGCTGTTGTTACACTTaGAGAATGAGCTCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQRCCYT*RMSSRV
Trigger: GACCCTTGAGCTCATTCTCCAAGTGTAACAACAGCG...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCTTGTCTCCAGATTCCTaGGTACTTCACCATTTTCTG +
Preference number: 2 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVLSPDS*VLHHFL
Trigger: CAGAAAATGGTGAAGTACTCAGGAATCTGGAGACAA...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGAAATAGGGGGAGTCTaGGCTGGGGGACCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFEIGGV*AGGPAG
Trigger: ACCCGCTGGTCCCCCAGCTCAGACTCCCCCTATTTC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGTGGAGGAGGATACAATaGAGGCTGGGTTTTAAAAGG +
Preference number: 2 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQWRRIQ*RLGFKR
Trigger: CCTTTTAAAACCCAGCCTTCATTGTATCCTCCTCCA...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGGAGCCACAAATGCATaGGGGCTCTTTAAGAACTTT +
Preference number: 2 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAGATNA*GLFKNF
Trigger: AAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTCAGCTGGTCATCTCTTaGCTAGACCTACTTTATTGC +
Preference number: 2 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAQLVIS*LDLLYC
Trigger: GCAATAAAGTAGGTCTAGCCAAGAGATGACCAGCTG...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp AGAATCCCTGTTCCTCTGCCCTCGAGAGGGCCAGTTTATAGGTGTTaGGAAAGGTCAGGATGGGGACAAAGAACTATGCTTGCAATGTCA +
Preference number: 2 (lower is better)
Translates to: RIPVPLPSRGPVYRC*ERSGWGQRTMLAMS
Trigger: TGACATTGCAAGCATAGTTCTTTGTCCCCATCCTGACCTTTCCAAACACCTATAAACTGGCCCTCTCGAGGGCAGAGGAACAGGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTAAGACCATTCTGCTaGTGTATTGTGGAGCCACAA +
Preference number: 2 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDLRPFC*CIVEPQ
Trigger: TTGTGGCTCCACAATACATCAGCAGAATGGTCTTAA...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTTCACGAGCAGCCACTaGGAAACGAGGTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRFTSSH*ETRSSG
Trigger: CCCTGAAGACCTCGTTTCTCAGTGGCTGCTCGTGAA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGAGGAGGCCAGCATTTaGCAAGTGGAACAGCACTGG +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIREEASI*QVEQHW
Trigger: CCAGTGCTGTTCCACTTGTCAAATGCTGGCCTCCTC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGCTCAAAACTATGAAGTaGTGTGTGTTGCCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQLKTMK*CVLPFP
Trigger: AGGGAAAGGCAACACACATCACTTCATAGTTTTGAG...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGACACCTCTCAGCCCTaGAGCATGTCTCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRDTSQP*SMSQSP
Trigger: TGGAGACTGAGACATGCTGCAGGGCTGAGAGGTGTC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTGGGTTCACGCACTGTaGCAGCCTTGCTCATTCCTT +
Preference number: 2 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVWVHAL*QPCSFL
Trigger: AAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCA...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGGGGTCCTGCTGTCTTaGCTGAGGGTAGACACTGCC +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFGVLLS*LRVDTA
Trigger: GGCAGTGTCTACCCTCAGCCAAGACAGCAGGACCCC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATGCTGTTGTTGGCACTTaGTACAGGACTTCTATGGCT +
Preference number: 2 (lower is better)
Translates to: DQERQWRTHTSRPATYSDAVVGT*YRTSMA
Trigger: AGCCATAGAAGTCCTGTACCAAGTGCCAACAACAGC...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGGCACAGCATACCTaGGTGAGAATGTTTAACCCC +
Preference number: 2 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTPAQHT*VRMFNP
Trigger: GGGGTTAAACATTCTCACTCAGGTATGCTGTGCCGG...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGACCCAAGGTCATGGTaGCTCCTGGGGGCATACATG +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFDPRSW*LLGAYM
Trigger: CATGTATGCCCCCAGGAGTCACCATGACCTTGGGTC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCACATGTGGGGAAGCATaGGGAGAAACTGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVTCGEA*GETEEE
Trigger: CTCTTCCTCAGTTTCTCCTCATGCTTCCCCACATGT...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATTACAGCATCACTGTCTaGGCCAATGAAAGAGGCATT +
Preference number: 2 (lower is better)
Translates to: DQERQWRTHTSRPATYSDYSITV*ANERGI
Trigger: AATGCCTCTTTCATTGGCTCAGACAGTGATGCTGTA...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGGGTTCCAGACTGTGTaGGAAGCAGGTAGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFGFQTV*EAGRGP
Trigger: AGGACCCCTACCTGCTTCTCACACAGTCTGGAACCC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATGCAAACCTGAAAGGTTaGGAGAGTGTTTGCGAAAAC +
Preference number: 2 (lower is better)
Translates to: DQERQWRTHTSRPATYSDANLKG*ESVCEN
Trigger: GTTTTCGCAAACACTCTCTCAACCTTTCAGGTTTGC...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGCATTAGAAACAACATaGTTGGCAAGAGGAATACCT +
Preference number: 2 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQALETT*LARGIP
Trigger: AGGTATTCCTCTTGCCAATCATGTTGTTTCTAATGC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTCACCATTGCTTCCCTTaGCTGTGGTTTCCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFHHCFP*LWFPFF
Trigger: GAAGAAAGGAAACCACAGGCAAGGGAAGCAATGGTG...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCAGAGGCAAACACAATTaGGTTCACGCACTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVRGKHN*VHALWQ
Trigger: CTGCCACAGTGCGTGAACCCAATTGTGTTTGCCTCT...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGTTCTTTGTCAATAGATaGGAATCTGCAGGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQFFVNR*ESAGSL
Trigger: AAGGCTTCCTGCAGATTCCCATCTATTGACAAAGAA...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp AGCTTATGGAGAGCACTCACAGCTAATGACTCAGCTGGTCATCTCTaGGCTAGACCTACTTTATTGCTATTAGCTATGGCCTGGAGCACT +
Preference number: 2 (lower is better)
Translates to: SLWRALTANDSAGHL*ARPTLLLLAMAWST
Trigger: AGTGCTCCAGGCCATAGCTAATAGCAATAAAGTAGGTCTAGCCAAGAGATGACCAGCTGAGTCATTAGCTGTGAGTGCTCTCCATAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTCTGAGTAAGGCCCCCTaGAAACAACAGGCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFLSKAP*KQQAWV
Trigger: AACCCAGGCCTGTTGTTTTCAGGGGGCCTTACTCAG...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCACTGAGTAAGGCCCCCTaGAAACAACAGGCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPLSKAP*KQQAWV
Trigger: AACCCAGGCCTGTTGTTTTCAGGGGGCCTTACTCAG...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGACATGTGGGGAAGCATaGGGAGAAACTGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRTCGEA*GETEEE
Trigger: CTCTTCCTCAGTTTCTCCTCATGCTTCCCCACATGT...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTGTTTCCAGGGGCTCTaGGGACATGAGATTGCTATG +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRCFQGL*GHEIAM
Trigger: CATAGCAATCTCATGTCCCCAGAGCCCCTGGAAACA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGCAAGTGGAACAGCACTaGCAGCCCACACCTGAATTT +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRQVEQH*QPTPEF
Trigger: AAATTCAGGTGTGGGCTGCCAGTGCTGTTCCACTTG...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp AAACTGGGGAATGGAACATTGCAAGAAGGTGATTTCAGAATGCCCTaGACTGGTGCTGTGGGGTTTATACTAACCTTGCAGGCAGATCTT +
Preference number: 2 (lower is better)
Translates to: KLGNGTLQEGDFRMP*TGAVGFILTLQADL
Trigger: AAGATCTGCCTGCAAGGTTAGTATAAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCCATTCCCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp ACCTGGCTGGCCATCATCTCAACTGATTCTTCTAGACACAGATCTTaGCTGTTGTTGGCACTTGGTACAGGACTTCTATGGCTCAAAACT +
Preference number: 2 (lower is better)
Translates to: TWLAIISTDSSRHRS*LLLALGTGLLWLKT
Trigger: AGTTTTGAGCCATAGAAGTCCTGTACCAAGTGCCAACAACAGCAAAGATCTGTGTCTAGAAGAATCAGTTGAGATGATGGCCAGCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTACAGCATCACTGTCTaGGCCAATGAAAGAGGCATT +
Preference number: 2 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVYSITV*ANERGI
Trigger: AATGCCTCTTTCATTGGCTCAGACAGTGATGCTGTA...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTCTGCTGATGTATTGTaGAGCCACAAATGCATGCGG +
Preference number: 2 (lower is better)
Translates to: TIYACTSITSEMFPGALGSADVL*SHKCMR
Trigger: CCGCATGCATTTGTGGCTCCACAATACATCAGCAGA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCATGGGTTCACGCACTGTaGCAGCCTTGCTCATTCCTT +
Preference number: 2 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPWVHAL*QPCSFL
Trigger: AAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCA...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGAAGCCAAAGACATGTaGGGAAGCATGAGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIREAKDM*GSMRRN
Trigger: GTTTCTCCTCATGCTTCCCCACATGTCTTTGGCTTC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp AGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTaGTCCGGTTTCACAATACGAAATCCTCAGTTGTTTTCTAAAGTA +
Preference number: 2 (lower is better)
Translates to: RPFEHVLYAAAHAVD*SGFTIRNPQLFSKV
Trigger: TACTTTAGAAAACAACTGAGGATTTCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CAA 90 bp AAAGTTGAATTCTACACATTGAAACAAATGGAATTCCGAGGCCTTTaGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCG +
Preference number: 2 (lower is better)
Translates to: KVEFYTLKQMEFRGL*NMFYMQPLTPWTCP
Trigger: CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTTCAATGTGTAGAATTCAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGCCGGCACAGCATACCTaGGTGAGAATGTTTAACCCC +
Preference number: 2 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGPAQHT*VRMFNP
Trigger: GGGGTTAAACATTCTCACTCAGGTATGCTGTGCCGG...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCCCGGCACAGCATACCTaGGTGAGAATGTTTAACCCC +
Preference number: 2 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPPAQHT*VRMFNP
Trigger: GGGGTTAAACATTCTCACTCAGGTATGCTGTGCCGG...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTATTCCCAAAGCAAGCTaGCTTTCTTTTAACTCTGCT +
Preference number: 2 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFIPKAS*LSFNSA
Trigger: AGCAGAGTTAAAAGAAAGTCAGCTTGCTTTGGGAAT...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTCAGCTTATTGGAACTaGGAGACTGGAAAGCAACAC +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRSAYWN*ETGKQH
Trigger: GTGTTGCTTTCCAGTCTCTCAGTTCCAATAAGCTGA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGGGAGCCACAAATGCATaGGGGCTCTTTAAGAACTTT +
Preference number: 2 (lower is better)
Translates to: TIYACTSITSEMFPGALGGATNA*GLFKNF
Trigger: AAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCC...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGCACTGTGGCAGCCTTaGTCATTCCTTACAATATCT +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRALWQP*SFLTIS
Trigger: AGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAGCAGATGCACAACCCTaGAGCCAGCTACACACTTGT +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQADAQP*SQLHTC
Trigger: ACAAGTGTGTAGCTGGCTGCAGGGTTGTGCATCTGC...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTCAACCTGTAGAGTTTTaGAAAGATCTCCATGGATGT +
Preference number: 2 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFQPVEF*KDLHGC
Trigger: ACATCCATGGAGATCTTTGCAAAACTCTACAGGTTG...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTAAACAAACATACCAATaGGAGCAGAAGCCAAAGACA +
Preference number: 2 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFKQTYQ*EQKPKT
Trigger: TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTT...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTTGCACTTGAGAATATaGCTAGAAGTTACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRLHLRI*LEVTGP
Trigger: GGGGCCAGTAACTTCTAGCCATATTCTCAAGTGCAA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTTAAGACCATTCTGCTaGTGTATTGTGGAGCCACAA +
Preference number: 2 (lower is better)
Translates to: TIYACTSITSEMFPGALGLRPFC*CIVEPQ
Trigger: TTGTGGCTCCACAATACATCAGCAGAATGGTCTTAA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGTTAAGACCATTCTGCTaGTGTATTGTGGAGCCACAA +
Preference number: 2 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTLRPFC*CIVEPQ
Trigger: TTGTGGCTCCACAATACATCAGCAGAATGGTCTTAA...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCACACTGTCTGAGCCAATaGAAGAGGCATTCATACCCA +
Preference number: 2 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPHCLSQ*KRHSYP
Trigger: TGGGTATGAATGCCTCTTTCATTGGCTCAGACAGTG...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGCTAGACACAGATCTTTaGTGTTGTTGGCACTTGGTA +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRLDTDL*CCWHLV
Trigger: TACCAAGTGCCAACAACAGCAAAGATCTGTGTCTAG...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGAGAGGCAAACACAATTaGGTTCACGCACTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGRGKHN*VHALWQ
Trigger: CTGCCACAGTGCGTGAACCCAATTGTGTTTGCCTCT...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCCACCGTGTGGTGTCTaGTGTGGTGATTGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: KTTIYACTSITSEMFPGAPPCGV*CGDCSD
Trigger: ATCAGAGCAATCACCACACCAGACACCACACGGTGG...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAATGTTTCCAGGGGCTCTaGGGACATGAGATTGCTATG +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQCFQGL*GHEIAM
Trigger: CATAGCAATCTCATGTCCCCAGAGCCCCTGGAAACA...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTTTGGAACTGAGAGACTaGAAAGCAACACCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFLELRD*KATPSS
Trigger: TGAGGAGGGTGTTGCTTTCCAGTCTCTCAGTTCCAA...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTCACAGCATACCTGAGTaGGAATGTTTAACCCCATCT +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFHSIPE*ECLTPS
Trigger: AGATGGGGTTAAACATTCTCACTCAGGTATGCTGTG...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTGGGGAATGGAACATTaGAAGAAGGTGATTTCAGAA +
Preference number: 2 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRWGMEH*KKVISE
Trigger: TTCTGAAATCACCTTCTTGCAATGTTCCATTCCCCA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGCTGTCTATCAATGCTaGTGTTCCCAGTTGACAAAG +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFAVYQC*CSQLTK
Trigger: CTTTGTCAACTGGGAACAGCAGCATTGATAGACAGC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTTCTGCTGATGTATTGTaGAGCCACAAATGCATGCGG +
Preference number: 2 (lower is better)
Translates to: KTTIYACTSITSEMFPGASADVL*SHKCMR
Trigger: CCGCATGCATTTGTGGCTCCACAATACATCAGCAGA...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAAGAGGCAAACACAATTaGGTTCACGCACTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTRGKHN*VHALWQ
Trigger: CTGCCACAGTGCGTGAACCCAATTGTGTTTGCCTCT...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCAACTCTCACTGCTGAATaGAACTCAGGTTCTACTGTT +
Preference number: 2 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPTLTAE*NSGSTV
Trigger: AACAGTAGAACCTGAGTTCCATTCAGCAGTGAGAGT...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 90 bp GCTCACGCCGTGGACTTGTCCGGTTTCACAATACGAAATCCTCAGTaGTTTTCTAAAGTAATTCAGAATAAAAACACATTCACAACCTGT +
Preference number: 2 (lower is better)
Translates to: AHAVDLSGFTIRNPQ*FSKVIQNKNTFTTC
Trigger: ACAGGTTGTGAATGTGTTTTTATTCTGAATTACTTTAGAAAACAACTGAGGATTTCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAAATTCCGAGGCCTTTTaGACATGTTCTATATGCAGC +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQNSEAF*TCSICS
Trigger: GCTGCATATAGAACATGTTCAAAAGGCCTCGGAATT...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGTTGTCTCCAGATTCCTaGGTACTTCACCATTTTCTG +
Preference number: 2 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGLSPDS*VLHHFL
Trigger: CAGAAAATGGTGAAGTACTCAGGAATCTGGAGACAA...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAAACATTGCAAGAAGGTaGTTTCAGAATGCCCTTGAC +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQNIARR*FQNALD
Trigger: GTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTT...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACTCATGATGCAAACCTaGAAGGTTGAGAGAGTGTTT +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQLMMQT*KVERVF
Trigger: AAACACTCTCTCAACCTTTCAGGTTTGCATCATGAG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACTCAAAACTATGAAGTaGTGTGTGTTGCCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQLKTMK*CVLPFP
Trigger: AGGGAAAGGCAACACACATCACTTCATAGTTTTGAG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAAGAGTAAATGCTCTCTaGCCAAGAAAGACAATGGAG +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQRVNAL*PRKTME
Trigger: CTCCATTGTCTTTCTTGGTCAGAGAGCATTTACTCT...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTAGTCCAGCATGTCAGTaGGTTGTGCTGATTAAATTA +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFSPACQ*VVLIKL
Trigger: TAATTTAATCAGCACAACTCACTGACATGCTGGACT...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTCAACCTGTAGAGTTTTaGAAAGATCTCCATGGATGT +
Preference number: 2 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFQPVEF*KDLHGC
Trigger: ACATCCATGGAGATCTTTGCAAAACTCTACAGGTTG...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACATCTGCTGATGTATTGTaGAGCCACAAATGCATGCGG +
Preference number: 2 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTSADVL*SHKCMR
Trigger: CCGCATGCATTTGTGGCTCCACAATACATCAGCAGA...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTTAAGACCATTCTGCTaGTGTATTGTGGAGCCACAA +
Preference number: 2 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSLRPFC*CIVEPQ
Trigger: TTGTGGCTCCACAATACATCAGCAGAATGGTCTTAA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR-3UTR TCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTAATTCCGAGGCCTTTTaGACATGTTCTATATGCAGC +
Preference number: 2 (lower is better)
Translates to: KTTIYACTSITSEMFPGANSEAF*TCSICS
Trigger: GCTGCATATAGAACATGTTCAAAAGGCCTCGGAATT...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAAGTCCAGCATGTCAGTaGGTTGTGCTGATTAAATTA +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQSPACQ*VVLIKL
Trigger: TAATTTAATCAGCACAACTCACTGACATGCTGGACT...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCGATTGTCTAAGACTTTaGAGTGTCTCCTGTAAGACT +
Preference number: 2 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPDCLRL*SVSCKT
Trigger: AGTCTTACAGGAGACACTGCAAAGTCTTAGACAATC...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCCAACCTGTAGAGTTTTaGAAAGATCTCCATGGATGT +
Preference number: 2 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPQPVEF*KDLHGC
Trigger: ACATCCATGGAGATCTTTGCAAAACTCTACAGGTTG...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAACCTTAAACAGCTTATaGAGAGCACTCACAGCTAAT +
Preference number: 2 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQTLNSL*RALTAN
Trigger: ATTAGCTGTGAGTGCTCTCCATAAGCTGTTTAAGGT...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR GCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTGATTGTCTAAGACTTTaGAGTGTCTCCTGTAAGACT +
Preference number: 2 (lower is better)
Translates to: KTTIYACTSITSEMFPGADCLRL*SVSCKT
Trigger: AGTCTTACAGGAGACACTGCAAAGTCTTAGACAATC...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAACTCTCACTGCTGAATaGAACTCAGGTTCTACTGTT +
Preference number: 2 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTTLTAE*NSGSTV
Trigger: AACAGTAGAACCTGAGTTCCATTCAGCAGTGAGAGT...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR TCA 72 bp AGTCTGAGCTGGGGGACCAGCGGGTTCCAGACTGTGTaGGAAGCAGGTAGGGGTCCTGCTGTCTTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SLSWGTSGFQTV*EAGRGPAVLAE
Trigger: CTCAGCCAAGACAGCAGGACCCCTACCTGCTTCTCACACAGTCTGGAACCCGCTGGTCCCCCAGCTCAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCTGTGGCCCATGGTCCTaGGGCTTCAGAGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVCGPWS*GFRVAV
Trigger: CACAGCCACTCTGAAGCCCAAGGACCATGGGCCACA...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 72 bp GGCGGTCTCAGACAGGGGAGTCCACCGTGTGGTGTCTaGTGTGGTGATTGCTCTGATCTATGTCATCCCACG +
Preference number: 3 (lower is better)
Translates to: GGLRQGSPPCGV*CGDCSDLCHPT
Trigger: CGTGGGATGACATAGATCAGAGCAATCACCACACCAGACACCACACGGTGGACTCCCCTGTCTGAGACCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR GCA 72 bp CAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATaGCGGGTCCAAAGTAGACCCCGTGTGGCCCATGGT +
Preference number: 3 (lower is better)
Translates to: QLGPGSSIKVTE*RVQSRPRVAHG
Trigger: ACCATGGGCCACACGGGGTCTACTTTGGACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 72 bp GAGCTGTGGGTACCTCTAGCATCTGTCCCTAGGAGCTaGCAGCTCACCATTGCTTCCCTTGCCTGTGGTTTC +
Preference number: 3 (lower is better)
Translates to: ELWVPLASVPRS*QLTIASLACGF
Trigger: GAAACCACAGGCAAGGGAAGCAATGGTGAGCTGCCAGCTCCTAGGGACAGATGCTAGAGGTACCCACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 72 bp CTCCTGGCTCAGAGACTGTATACTAGAGATGTAGCCTaGCTCTGCAGGAGCCTGGTGTCAGCCCTAGAGGGA +
Preference number: 3 (lower is better)
Translates to: LLAQRLYTRDVA*LCRSLVSALEG
Trigger: TCCCTCTAGGGCTGACACCAGGCTCCTGCAGAGCCAGGCTACATCTCTAGTATACAGTCTCTGAGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp AAGAGCTTATCAGCAGCAGCGTTCACGAGCAGCCACTaGGAAACGAGGTCTTCAGGGGAGCTGTGGGTACCT +
Preference number: 3 (lower is better)
Translates to: KSLSAAAFTSSH*ETRSSGELWVP
Trigger: AGGTACCCACAGCTCCCCTGAAGACCTCGTTTCTCAGTGGCTGCTCGTGAACGCTGCTGCTGATAAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR TCA 72 bp TTGAGAATATGGCTAGAAGTTACTGGCCCCCAGTGCTaGGGCCGAGCTGGAGCTGACACAGAGCGTTCCTAC +
Preference number: 3 (lower is better)
Translates to: LRIWLEVTGPQC*GRAGADTERSY
Trigger: GTAGGAACGCTCTGTGTCAGCTCCAGCTCGGCCTCAGCACTGGGGGCCAGTAACTTCTAGCCATATTCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp GTTCGCACATCCCCCAGACTCCCAGAGTGCCACACATaGAAGCCCCGCTCTACACCTACAGTTCTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: VRTSPRLPECHT*KPRSTPTVLWK
Trigger: TTTCCACAGAACTGTAGGTGTAGAGCGGGGCTTTCATGTGTGGCACTCTGGGAGTCTGGGGGATGTGCGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp GCTCAGAGACTGTATACTAGAGATGTAGCCTGGCTCTaGAGGAGCCTGGTGTCAGCCCTAGAGGGATCACAC +
Preference number: 3 (lower is better)
Translates to: AQRLYTRDVAWL*RSLVSALEGSH
Trigger: GTGTGATCCCTCTAGGGCTGACACCAGGCTCCTGCAGAGCCAGGCTACATCTCTAGTATACAGTCTCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 72 bp GAACAGCACTGGCAGCCCACACCTGAATTTAGAAGCTaGCTTGGGAGTCAGTGTCAGGCCTTGGAGAAGGGA +
Preference number: 3 (lower is better)
Translates to: EQHWQPTPEFRS*LGSQCQALEKG
Trigger: TCCCTTCTCCAAGGCCTGACACTGACTCCCAAGCCAGCTTCTAAATTCAGGTGTGGGCTGCCAGTGCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGCTCACGCCGTGGACTaGTCCGGTTTCACAATACGA +
Preference number: 3 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQAHAVD*SGFTIR
Trigger: TCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGCTCACGCCGTGGACTaGTCCGGTTTCACAATACGA +
Preference number: 3 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAAHAVD*SGFTIR
Trigger: TCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp GCTGTGAGAGGCTCCTTGACTGGCAGTGACCACTGCTaGCTCTCACTGCTGAATGGAACTCAGGTTCTACTG +
Preference number: 3 (lower is better)
Translates to: AVRGSLTGSDHC*LSLLNGTQVLL
Trigger: CAGTAGAACCTGAGTTCCATTCAGCAGTGAGAGTCAGCAGTGGTCACTGCCAGTCAAGGAGCCTCTCACAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR TCA 72 bp CTTCAGAGTGGCTGTGAGAGGCTCCTTGACTGGCAGTaGCCACTGCTGACTCTCACTGCTGAATGGAACTCA +
Preference number: 3 (lower is better)
Translates to: LQSGCERLLDWQ*PLLTLTAEWNS
Trigger: TGAGTTCCATTCAGCAGTGAGAGTCAGCAGTGGTCACTGCCAGTCAAGGAGCCTCTCACAGCCACTCTGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR TCA 72 bp AGTTACTGGCCCCCAGTGCTGAGGCCGAGCTGGAGCTaGCACAGAGCGTTCCTACACACATGTATTTTGCAT +
Preference number: 3 (lower is better)
Translates to: SYWPPVLRPSWS*HRAFLHTCILH
Trigger: ATGCAAAATACATGTGTGTAGGAACGCTCTGTGTCAGCTCCAGCTCGGCCTCAGCACTGGGGGCCAGTAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp AACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTaGGCTGGGGGACCAGCGGGTTCCAGACTGTGTGAG +
Preference number: 3 (lower is better)
Translates to: NSSASYLEIGGV*AGGPAGSRLCE
Trigger: CTCACACAGTCTGGAACCCGCTGGTCCCCCAGCTCAGACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp ATATGTGCACACCAGGCAAGGGCACAGCCAATTGGTTaGCGCTTTCTCAGTAAAGAGGAAGACCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: ICAHQARAQPIG*RFLSKEEDLAG
Trigger: GCCAGCCAGGTCTTCCTCTTTACTGAGAAAGCGGCAACCAATTGGCTGTGCCCTTGCCTGGTGTGCACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp TCAGTGGCATCAGCCATGACCAGGCCATGTTTCTACTaGAGGAGGTGGTCATCCTTGATTGCTGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: SVASAMTRPCFY*RRWSSLIAELL
Trigger: CAGGAGCTCAGCAATCAAGGATGACCACCTCCTTCAGTAGAAACATGGCCTGGTCATGGCTGATGCCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 72 bp AGACTGTGTGAGAAGCAGGTAGGGGTCCTGCTGTCTTaGCTGAGGGTAGACACTGCCTCACTGAAGCTAAAT +
Preference number: 3 (lower is better)
Translates to: RLCEKQVGVLLS*LRVDTASLKLN
Trigger: ATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGACAGCAGGACCCCTACCTGCTTCTCACACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 72 bp AATTTAGAAGCTGGCTTGGGAGTCAGTGTCAGGCCTTaGAGAAGGGAGCTGTTGTCAGCCTTGGAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: NLEAGLGVSVRP*RRELLSALEEE
Trigger: TTCCTCCTCCAAGGCTGACAACAGCTCCCTTCTCCAAGGCCTGACACTGACTCCCAAGCCAGCTTCTAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTGTGGCCCATGGTCCTaGGGCTTCAGAGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVCGPWS*GFRVAV
Trigger: CACAGCCACTCTGAAGCCCAAGGACCATGGGCCACA...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp CTCCTGGGGGCATACATGTTTAAATGTAGGATACCTTaGCGCAGATGCACAACCCTGCAGCCAGCTACACAC +
Preference number: 3 (lower is better)
Translates to: LLGAYMFKCRIP*RRCTTLQPATH
Trigger: GTGTGTAGCTGGCTGCAGGGTTGTGCATCTGCGTCAAGGTATCCTACATTTAAACATGTATGCCCCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR GCA 72 bp CAAGGGTCACACCCACAGTGTTGCTATGGGAACCAATaGACAGTACCTTGGCAACAGAGTTGTAGTTGTCCG +
Preference number: 3 (lower is better)
Translates to: QGSHPQCCYGNQ*TVPWQQSCSCP
Trigger: CGGACAACTACAACTCTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 72 bp AGGGCAAATGTCCAGAGGAGGCCAGCATTTGACAAGTaGAACAGCACTGGCAGCCCACACCTGAATTTAGAA +
Preference number: 3 (lower is better)
Translates to: RANVQRRPAFDK*NSTGSPHLNLE
Trigger: TTCTAAATTCAGGTGTGGGCTGCCAGTGCTGTTCCACTTGTCAAATGCTGGCCTCCTCTGGACATTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp CCAGGCCATGTTTCTACTGAAGGAGGTGGTCATCCTTaGTTGCTGAGCTCCTGGCTCAGAGACTGTATACTA +
Preference number: 3 (lower is better)
Translates to: PGHVSTEGGGHP*LLSSWLRDCIL
Trigger: TAGTATACAGTCTCTGAGCCAGGAGCTCAGCAATCAAGGATGACCACCTCCTTCAGTAGAAACATGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp CTTGCAGGCAGATCTTTACCTCTGAACTACAACTCCTaGTTCTTGCCATTCTGGGGCCACAGAACTATCTGG +
Preference number: 3 (lower is better)
Translates to: LAGRSLPLNYNS*FLPFWGHRTIW
Trigger: CCAGATAGTTCTGTGGCCCCAGAATGGCAAGAAGCAGGAGTTGTAGTTCAGAGGTAAAGATCTGCCTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp ATGTCCCTAGAGTTTCAAGGGTCACACCCACAGTGTTaGTATGGGAACCAATGCACAGTACCTTGGCAACAG +
Preference number: 3 (lower is better)
Translates to: MSLEFQGSHPQC*YGNQCTVPWQQ
Trigger: CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCCTTGAAACTCTAGGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTACAACCTGTAGAGTTTaGCAAAGATCTCCATGGATG +
Preference number: 3 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPATTCRV*QRSPWM
Trigger: CATCCATGGAGATCTTTGCAAAACTCTACAGGTTGT...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGCTAAAGAACAGTCCTTaGTTCTCTACTAGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQLKNSP*FSTSPE
Trigger: TTCTGGGCTAGTAGAGAACAAAGGACTGTTCTTTAG...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp GGGTTTATACTAACCTTGCAGGCAGATCTTTACCTCTaGACTACAACTCCTGCTTCTTGCCATTCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: GFILTLQADLYL*TTTPASCHSGA
Trigger: GGCCCCAGAATGGCAAGAAGCAGGAGTTGTAGTTCAGAGGTAAAGATCTGCCTGCAAGGTTAGTATAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp TTCCCTAAGGAGCTGGTAAAGTCAGCTTATTGGAACTaGGAGACTGGAAAGCAACACCCTCCTCAGTGGCAT +
Preference number: 3 (lower is better)
Translates to: FPKELVKSAYWN*ETGKQHPPQWH
Trigger: ATGCCACTGAGGAGGGTGTTGCTTTCCAGTCTCTCAGTTCCAATAAGCTGACTTTACCAGCTCCTTAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp GGCTGGGTTTTAAAAGGAGACAGAGTAAATGCTCTCTaGCCAAGAAAGACAATGGAGGACGCACACCAGCAG +
Preference number: 3 (lower is better)
Translates to: GWVLKGDRVNAL*PRKTMEDAHQQ
Trigger: CTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTCAGAGAGCATTTACTCTGTCTCCTTTTAAAACCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp AACATGGCCTGGAATTTGCCAGCGAGGAAGAGAAATTaGCAACTAGGCTTCTCATGTCCACGGAAGAACCTT +
Preference number: 3 (lower is better)
Translates to: NMAWNLPARKRN*QLGFSCPRKNL
Trigger: AAGGTTCTTCCGTGGACATGAGAAGCCTAGTTGGCAATTTCTCTTCCTCGCTGGCAAATTCCAGGCCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp TCCCACTGGAGGGTGTTCCATGCTGAGTTTGTCTCATaGCAATACTGTCCAATAAGATCCAAGAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: SHWRVFHAEFVS*QYCPIRSKRSV
Trigger: CACAGACCTCTTGGATCTTATTGGACAGTATTGGCATGAGACAAACTCAGCATGGAACACCCTCCAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTTCACCATTGCTTCCCTaGCCTGTGGTTTCCTTTCTT +
Preference number: 3 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFSPLLP*PVVSFL
Trigger: AAGAAAGGAAACCACAGGCAAGGGAAGCAATGGTGA...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGAGCCTGTGAGTTCTTaGATGGAGACAAACCTGGGC +
Preference number: 3 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIREPVSS*METNLG
Trigger: GCCCAGGTTTGTCTCCATCAAAGAACTCACAGGCTC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGAGCTGTTGTCAGCCTaGGAGGAGGAATGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFELLSA*EEECRL
Trigger: CAGCCTGCATTCCTCCTCCAAGGCTGACAACAGCTC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGAAGAGGCAAACACAATaGGGTTCACGCACTGTGGCA +
Preference number: 3 (lower is better)
Translates to: TIYACTSITSEMFPGALGKRQTQ*GSRTVA
Trigger: TGCCACAGTGCGTGAACCCAATTGTGTTTGCCTCTT...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTTGCTATGTACATCTTTaGTATCCAGCAGGAAAAAGA +
Preference number: 3 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPACYVHL*YPAGKR
Trigger: TCTTTTTCCTGCTGGATACAAAAGATGTACATAGCA...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTTCAGCTGGTCATCTCTaGGCTAGACCTACTTTATTG +
Preference number: 3 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFSAGHL*ARPTLL
Trigger: CAATAAAGTAGGTCTAGCCAAGAGATGACCAGCTGA...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp GTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTaGTGTATTGTGGAGCCACAAATGCATGCGGGCTCT +
Preference number: 3 (lower is better)
Translates to: VSHVTKQLRPFC*CIVEPQMHAGS
Trigger: AGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR TCA 72 bp TGGCACTTGGTACAGGACTTCTATGGCTCAAAACTATaGAGTGATGTGTGTTGCCTTTCCCTAAGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: WHLVQDFYGSKL*SDVCCLSLRSW
Trigger: CCAGCTCCTTAGGGAAAGGCAACACACATCACTTCATAGTTTTGAGCCATAGAAGTCCTGTACCAAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp GGCAAACACAATTGGGTTCACGCACTGTGGCAGCCTTaGTCATTCCTTACAATATCTTGTCTCCAGATTCCT +
Preference number: 3 (lower is better)
Translates to: GKHNWVHALWQP*SFLTISCLQIP
Trigger: AGGAATCTGGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAATTGTGTTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR GCA 72 bp ACAACCTGTAGAGTTTTGCAAAGATCTCCATGGATGTaGCAGCTGGGACCAGGTAGCTCAATAAAGGTGACA +
Preference number: 3 (lower is better)
Translates to: TTCRVLQRSPWM*QLGPGSSIKVT
Trigger: TGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCATGGAGATCTTTGCAAAACTCTACAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 72 bp CTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTaGACTTGTCCGGTTTCACAATACGAAATCCTCAGT +
Preference number: 3 (lower is better)
Translates to: LLNMFYMQPLTP*TCPVSQYEILS
Trigger: ACTGAGGATTTCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CCA 72 bp CAATTGGTTGCCGCTTTCTCAGTAAAGAGGAAGACCTaGCTGGCCATCATCTCAACTGATTCTTCTAGACAC +
Preference number: 3 (lower is better)
Translates to: QLVAAFSVKRKT*LAIISTDSSRH
Trigger: GTGTCTAGAAGAATCAGTTGAGATGATGGCCAGCCAGGTCTTCCTCTTTACTGAGAAAGCGGCAACCAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGGCTCACGCCGTGGACTaGTCCGGTTTCACAATACGA +
Preference number: 3 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGAHAVD*SGFTIR
Trigger: TCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGC...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGAACATGGCCTGGAATTaGCCAGCGAGGAAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRNMAWN*PARKRN
Trigger: ATTTCTCTTCCTCGCTGGCAAATTCCAGGCCATGTT...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAGCCAGGCCACCGCTGTaGTTACACTTGGAGAATGAG +
Preference number: 3 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQARPPL*LHLENE
Trigger: CTCATTCTCCAAGTGTAACAACAGCGGTGGCCTGGC...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp GAGGGAGAAACTCTAGTCAAAGACCCAAGGTCATGGTaGCTCCTGGGGGCATACATGTTTAAATGTAGGATA +
Preference number: 3 (lower is better)
Translates to: EGETLVKDPRSW*LLGAYMFKCRI
Trigger: TATCCTACATTTAAACATGTATGCCCCCAGGAGTCACCATGACCTTGGGTCTTTGACTAGAGTTTCTCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR TCA 72 bp GCAGATGCACGATCATGTGCAGCATTAGAAACAACATaGTTGGCAAGAGGAATACCTGCTCACAAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: ADARSCAALETT*LARGIPAHKEA
Trigger: GGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCTAATGCTGCACATGATCGTGCATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp AGCATTAGAAACAACATGATTGGCAAGAGGAATACCTaGTCACAAAGAAGCCACATCAGGGATAGAGGGCCT +
Preference number: 3 (lower is better)
Translates to: SIRNNMIGKRNT*SQRSHIRDRGP
Trigger: AGGCCCTCTATCCCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCTAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 72 bp ACATCAAGAGGCAAACACAATTGGGTTCACGCACTGTaGCAGCCTTGCTCATTCCTTACAATATCTTGTCTC +
Preference number: 3 (lower is better)
Translates to: TSRGKHNWVHAL*QPCSFLTISCL
Trigger: GAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAATTGTGTTTGCCTCTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCATTCTGCTGATGTATaGTGGAGCCACAAATGCATG +
Preference number: 3 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTHSADV*WSHKCM
Trigger: CATGCATTTGTGGCTCCACAATACATCAGCAGAATG...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTCAGCTGGTCATCTCTaGGCTAGACCTACTTTATTG +
Preference number: 3 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRSAGHL*ARPTLL
Trigger: CAATAAAGTAGGTCTAGCCAAGAGATGACCAGCTGA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCCTAAAGAACAGTCCTTaGTTCTCTACTAGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVLKNSP*FSTSPE
Trigger: TTCTGGGCTAGTAGAGAACAAAGGACTGTTCTTTAG...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTAATCTGCAGGAAGCCTaGACTTTTCCATCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFNLQEA*TFPSLP
Trigger: TGGGAGGGATGGAAAAGTCAAGGCTTCCTGCAGATT...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp CCATCATCTCAACTGATTCTTCTAGACACAGATCTTTaGTGTTGTTGGCACTTGGTACAGGACTTCTATGGC +
Preference number: 3 (lower is better)
Translates to: PSSQLILLDTDL*CCWHLVQDFYG
Trigger: GCCATAGAAGTCCTGTACCAAGTGCCAACAACAGCAAAGATCTGTGTCTAGAAGAATCAGTTGAGATGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 72 bp AGAACAAACATCCCTAGCAGTACCTTAAACAGCTTATaGAGAGCACTCACAGCTAATGACTCAGCTGGTCAT +
Preference number: 3 (lower is better)
Translates to: RTNIPSSTLNSL*RALTANDSAGH
Trigger: ATGACCAGCTGAGTCATTAGCTGTGAGTGCTCTCCATAAGCTGTTTAAGGTACTGCTAGGGATGTTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGGAATTCCGAGGCCTTTaGAACATGTTCTATATGCAG +
Preference number: 3 (lower is better)
Translates to: TIYACTSITSEMFPGALGEFRGL*NMFYMQ
Trigger: CTGCATATAGAACATGTTCAAAAGGCCTCGGAATTC...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCCGCACTGTGGCAGCCTaGCTCATTCCTTACAATATC +
Preference number: 3 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPRTVAA*LIPYNI
Trigger: GATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCG...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACGCACTGTGGCAGCCTaGCTCATTCCTTACAATATC +
Preference number: 3 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQRTVAA*LIPYNI
Trigger: GATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGGACAGCTTTTGCACTaGAGAATATGGCTAGAAGTT +
Preference number: 3 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRGQLLH*RIWLEV
Trigger: AACTTCTAGCCATATTCTCAAGTGCAAAAGCTGTCC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTCATTCTGCTGATGTATaGTGGAGCCACAAATGCATG +
Preference number: 3 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFHSADV*WSHKCM
Trigger: CATGCATTTGTGGCTCCACAATACATCAGCAGAATG...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTAAGAGGCAAACACAATaGGGTTCACGCACTGTGGCA +
Preference number: 3 (lower is better)
Translates to: KTTIYACTSITSEMFPGAKRQTQ*GSRTVA
Trigger: TGCCACAGTGCGTGAACCCAATTGTGTTTGCCTCTT...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR TCA 72 bp AGGTATCAAATAGCTCATGATGCAAACCTGAAAGGTTaGGAGAGTGTTTGCGAAAACAACATGGCCTGGAAT +
Preference number: 3 (lower is better)
Translates to: RYQIAHDANLKG*ESVCENNMAWN
Trigger: ATTCCAGGCCATGTTGTTTTCGCAAACACTCTCTCAACCTTTCAGGTTTGCATCATGAGCTATTTGATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CCA 72 bp AGCAAACTTCTCTTTATCACTATCCAGAGGAGAGTGTaGAAAAGCTGTGATGGTAACCCTTCAGGTCATTTA +
Preference number: 3 (lower is better)
Translates to: SKLLFITIQRRV*KSCDGNPSGHL
Trigger: TAAATGACCTGAAGGGTTACCATCACAGCTTTTCCACACTCTCCTCTGGATAGTGATAAAGAGAAGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCCATTCTGCTGATGTATaGTGGAGCCACAAATGCATG +
Preference number: 3 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPHSADV*WSHKCM
Trigger: CATGCATTTGTGGCTCCACAATACATCAGCAGAATG...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACATTCTGCTGATGTATaGTGGAGCCACAAATGCATG +
Preference number: 3 (lower is better)
Translates to: LKFMKNQENVICLTRYEAHSADV*WSHKCM
Trigger: CATGCATTTGTGGCTCCACAATACATCAGCAGAATG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR-3UTR CAA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCATTCTGCTGATGTATaGTGGAGCCACAAATGCATG +
Preference number: 3 (lower is better)
Translates to: KTTIYACTSITSEMFPGAHSADV*WSHKCM
Trigger: CATGCATTTGTGGCTCCACAATACATCAGCAGAATG...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACATCACCATTGCTTCCCTaGCCTGTGGTTTCCTTTCTT +
Preference number: 3 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTSPLLP*PVVSFL
Trigger: AAGAAAGGAAACCACAGGCAAGGGAAGCAATGGTGA...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR GCA 72 bp TTCAATCTACTTTTGCTGTGCAGATGCACGATCATGTaGAGCATTAGAAACAACATGATTGGCAAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: FNLLLLCRCTIM*SIRNNMIGKRN
Trigger: ATTCCTCTTGCCAATCATGTTGTTTCTAATGCTGCACATGATCGTGCATCTGCACAGCAAAAGTAGATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR GCA 72 bp GCTTGCAATGTCATGATTTTCAATCTACTTTTGCTGTaGAGATGCACGATCATGTGCAGCATTAGAAACAAC +
Preference number: 3 (lower is better)
Translates to: ACNVMIFNLLLL*RCTIMCSIRNN
Trigger: GTTGTTTCTAATGCTGCACATGATCGTGCATCTGCACAGCAAAAGTAGATTGAAAATCATGACATTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAATTTTCAATCTACTTTaGCTGTGCAGATGCACGATC +
Preference number: 3 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQIFNLL*LCRCTI
Trigger: GATCGTGCATCTGCACAGCAAAAGTAGATTGAAAAT...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR TCA 72 bp TGCACAAAATTTAGATTTGAATACAGCATCACTGTCTaGGCCAATGAAAGAGGCATTCATACCCAGTCATTC +
Preference number: 3 (lower is better)
Translates to: CTKFRFEYSITV*ANERGIHTQSF
Trigger: GAATGACTGGGTATGAATGCCTCTTTCATTGGCTCAGACAGTGATGCTGTATTCAAATCTAAATTTTGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCTGCTATGTACATCTTTaGTATCCAGCAGGAAAAAGA +
Preference number: 3 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPCYVHL*YPAGKR
Trigger: TCTTTTTCCTGCTGGATACAAAAGATGTACATAGCA...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAACAACCTGTAGAGTTTaGCAAAGATCTCCATGGATG +
Preference number: 3 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTTTCRV*QRSPWM
Trigger: CATCCATGGAGATCTTTGCAAAACTCTACAGGTTGT...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR-3UTR CAA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACATGCTATGTACATCTTTaGTATCCAGCAGGAAAAAGA +
Preference number: 3 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTCYVHL*YPAGKR
Trigger: TCTTTTTCCTGCTGGATACAAAAGATGTACATAGCA...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPGSSSC*QGPLVM
Trigger: CATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVGSSSC*QGPLVM
Trigger: CATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACGGGCTTCAGCCACAGTaGCGCCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDGLQPQ*RLLLAN
Trigger: GTTGGCCAACAGGAGGCGCCACTGTGGCTGAAGCCC...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTGGGAGGCCGGGTGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPWEAGC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCCATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVAGKRF*VGDVGD
Trigger: GTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGC...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGCGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGTGGGAGGCCGGGTGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQWEAGC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCA...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTCTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPALGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDAGKRF*VGDVGD
Trigger: GTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGC...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATGGGCTTCAGCCACAGTaGCGCCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDGLQPQ*RLLLAN
Trigger: GTTGGCCAACAGGAGGCGCCACTGTGGCTGAAGCCC...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTGGGAGGCCGGGTGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFWEAGC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPEKLGS*AEACAP
Trigger: AGGGGCACATGCCTCCGCTCATGATCCCAATTTTTC...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVEKLGS*AEACAP
Trigger: AGGGGCACATGCCTCCGCTCATGATCCCAATTTTTC...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCTTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGCGCTGTACAGGCAAATaGAGAGGTGGCTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPRCTGK*RGGLLG
Trigger: TCCAAGCAAGCCACCTCTCCATTTGCCTGTACAGCG...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVCGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACCGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCCTCTTCCTTTTCCCTTaGGGTCAAGTCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVLFLFP*GQVLGH
Trigger: ATGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAG...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGGACTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAGTC...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTGGAGGCATGTGCCCCTaGACCTGGATCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFGGMCP*TWICCC
Trigger: GCAGCAACAGATCCAGGTTCAGGGGCACATGCCTCC...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCATACGTGCTCTGGATaGCAGGGAGGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGHTCSG*QGGWAR
Trigger: CCGAGCCCAGCCTCCCTGTCATCCAGAGCACGTATG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCATACGTGCTCTGGATaGCAGGGAGGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKHTCSG*QGGWAR
Trigger: CCGAGCCCAGCCTCCCTGTCATCCAGAGCACGTATG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTCAAGTCCTGGGTCATTaGTTCCTCTCCATCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAQVLGH*FLSIRC
Trigger: ACAGCGGATGGAGAGGAAGCAATGACCCAGGACTTG...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATCTGTTCATCATGGGCTaGCAGGAGCTGCTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDLFIMG*QELLPQ
Trigger: TTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAG...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCCGCTGTTTCTCGATCTaGGATGCTGCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVRCFSI*DAASFF
Trigger: GAAAAAGCTGGCAGCATCGCAGATCGAGAAACAGCG...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTTGGGCAGCAGCAGCTaGTGCCAAGGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGLGSSS*CQGPLV
Trigger: GACCAGCGGACCTTGGCAGCAGCTGCTGCTGCCCAA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCTTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGCTTGAGGTCAAGTCCTaGGTCATTGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPLEVKS*VIASSP
Trigger: TGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAG...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCCGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVRKLIS*VIMVES
Trigger: ACTCTCCACCATGATTACCCAGCTGATCAGCTTGCG...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATCTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDLGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTTCCTCCAATGGGGCTaGGGATGCTGCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPFLQWG*GCCFCL
Trigger: CAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATCCAGGCTTCCTCCAATaGGGCTGGGGATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDPGFLQ*GWGCCF
Trigger: AAAGCAGCATCCCCAGCCCCATTGGAGGAAGCCTGG...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTGTTGTTGCTCCCGCTaGATCTGTTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPCCCSR*ICSRIF
Trigger: GAAGATGCGAGAACAGATCCAGCGGGAGCAACAACA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGAGTGGCGCCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPSGASC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACT...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCATGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPCGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGCGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMCGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATATTGGTCGCTTGATGTaGGGTTCGCTGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDIGRLM*GSLLAR
Trigger: CCGTGCCAGCAGCGAACCCCACATCAAGCGACCAAT...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 72 bp AGAGGATATGTGCACACCAGGCAAGGGCACAGCCAATaGGTTGCCGCTTTCTCAGTAAAGAGGAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: RGYVHTRQGHSQ*VAAFSVKRKTW
Trigger: CCAGGTCTTCCTCTTTACTGAGAAAGCGGCAACCAATTGGCTGTGCCCTTGCCTGGTGTGCACATATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTTGGGAGGCCGGGTGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFWEAGC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCA...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGGCAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTGCC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGACTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAGTC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDIFRAS*MAFITV
Trigger: CACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGAT...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCATGTCAGGGAAGGCCTaGAGAATTTTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVMSGKA*RIFLLS
Trigger: CGAAAGGAGGAAAATTCTTCAGGCCTTCCCTGACAT...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGGTGGTGATGGGCATCTaGGGCTGTTGCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKVVMGI*GCCPTV
Trigger: CACTGTGGGGCAACAGCCTCAGATGCCCATCACCAC...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTCAGTCAGATGTCATCTaGGGTGATGGTGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAQSDVI*GDGVVV
Trigger: AACGACCACACCATCACCTCAGATGACATCTGACTG...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCATACGTGCTCTGGATaGCAGGGAGGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAHTCSG*QGGWAR
Trigger: CCGAGCCCAGCCTCCCTGTCATCCAGAGCACGTATG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCATACGTGCTCTGGATaGCAGGGAGGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVHTCSG*QGGWAR
Trigger: CCGAGCCCAGCCTCCCTGTCATCCAGAGCACGTATG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPSLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCCGCTGTACAGGCAAATaGAGAGGTGGCTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFRCTGK*RGGLLG
Trigger: TCCAAGCAAGCCACCTCTCCATTTGCCTGTACAGCG...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTCTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFLGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGATGCTGCTTTTGTTTaGCAGGTTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPADAAFV*QVDRAG
Trigger: ACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCATC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTTTCCTCCAATGGGGCTaGGGATGCTGCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAFLQWG*GCCFCL
Trigger: CAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAA...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGTGTTGTTGCTCCCGCTaGATCTGTTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQCCCSR*ICSRIF
Trigger: GAAGATGCGAGAACAGATCCAGCGGGAGCAACAACA...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGGCCCCATGTTGTTCATaGAGGACAGTTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPAPCCS*RTVSHQ
Trigger: TTGATGGGAAACTGTCCTCCATGAACAACATGGGGC...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACAGTGGCGCCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDSGASC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACT...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGTGGGAGGCCGGGTGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKWEAGC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCA...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGGAGGCATGTGCCCCTaGACCTGGATCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFGGMCP*TWICCC
Trigger: GCAGCAACAGATCCAGGTTCAGGGGCACATGCCTCC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
CDS-3UTR TCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFIFRAS*MAFITV
Trigger: CACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGAT...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGATGTCAGGGAAGGCCTaGAGAATTTTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQMSGKA*RIFLLS
Trigger: CGAAAGGAGGAAAATTCTTCAGGCCTTCCCTGACAT...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGTGGTGATGGGCATCTaGGGCTGTTGCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAVVMGI*GCCPTV
Trigger: CACTGTGGGGCAACAGCCTCAGATGCCCATCACCAC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCATACGTGCTCTGGATaGCAGGGAGGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLHTCSG*QGGWAR
Trigger: CCGAGCCCAGCCTCCCTGTCATCCAGAGCACGTATG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTGTTCATCATGGGCTaGCAGGAGCTGCTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGLFIMG*QELLPQ
Trigger: TTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCCGCTGTTTCTCGATCTaGGATGCTGCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFRCFSI*DAASFF
Trigger: GAAAAAGCTGGCAGCATCGCAGATCGAGAAACAGCG...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCTTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPCCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLGSSSC*QGPLVM
Trigger: CATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACGSSSC*QGPLVM
Trigger: CATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGAGGGGTCCAAATTCCTaGCAAAACGGTCACTTATGC +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQRGPNS*QNGHLC
Trigger: GCATAAGTGACCGTTTTGGCAGGAATTTGGACCCCT...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072804.11
CDS-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTTGCAGAGCCATTCATTaGTTTGCTTCCTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPACRAIH*FASFCV
Trigger: GACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCA...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACGGGCCTCATTCTCGCTaGTATAGTCTGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDGPHSR*YSLIWD
Trigger: ATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCC...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGGGCCTCATTCTCGCTaGTATAGTCTGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAGPHSR*YSLIWD
Trigger: ATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCCAGGCTTCCTCCAATaGGGCTGGGGATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGPGFLQ*GWGCCF
Trigger: AAAGCAGCATCCCCAGCCCCATTGGAGGAAGCCTGG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGPINSV*LLLLLP
Trigger: CGGGAGCAACAACAGCAGCCACACGGAGTTGATGGG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTGCCCCATGTTGTTCATaGAGGACAGTTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPAAPCCS*RTVSHQ
Trigger: TTGATGGGAAACTGTCCTCCATGAACAACATGGGGC...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGCCCCATGTTGTTCATaGAGGACAGTTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQAPCCS*RTVSHQ
Trigger: TTGATGGGAAACTGTCCTCCATGAACAACATGGGGC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCAGTGGCGCCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFSGASC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACT...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGGGCTTCAGCCACAGTaGCGCCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLGLQPQ*RLLLAN
Trigger: GTTGGCCAACAGGAGGCGCCACTGTGGCTGAAGCCC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTTCAGCCACAGTaGCGCCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACGLQPQ*RLLLAN
Trigger: GTTGGCCAACAGGAGGCGCCACTGTGGCTGAAGCCC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEACGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGGCACTGACAGGCTCTaGGGCCTCATTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAGTDRL*GLILAA
Trigger: AGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGGCACTGACAGGCTCTaGGGCCTCATTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFGTDRL*GLILAA
Trigger: AGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCTGGGAGGCCGGGTGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAWEAGC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCA...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCGTCAGGCTTATGTGGTaGGGTAGACGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFVRLMW*GRRISE
Trigger: TTCCGAAATACGTCTACCTCACCACATAAGCCTGAC...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTCTCAGGTGTACCTTTaGTTTCTCCAAGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPSQVYL*FLQEVH
Trigger: GTGAACTTCTTGGAGAAATCAAAGGTACACCTGAGA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGAGGCATGTGCCCCTaGACCTGGATCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACGGMCP*TWICCC
Trigger: GCAGCAACAGATCCAGGTTCAGGGGCACATGCCTCC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCATCATGGTGGAGAGTTaGCGTTCTTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFIMVES*RSFSAR
Trigger: CCTTGCAGAGAAAGAACGGCAACTCTCCACCATGAT...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCTGTTCATCATGGGCTaGCAGGAGCTGCTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVLFIMG*QELLPQ
Trigger: TTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMGSSSC*QGPLVM
Trigger: CATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNGSSSC*QGPLVM
Trigger: CATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATTTGGGCAGCAGCAGCTaGTGCCAAGGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNLGSSS*CQGPLV
Trigger: GACCAGCGGACCTTGGCAGCAGCTGCTGCTGCCCAA...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATTGGGCAGCAGCAGCTaGTGCCAAGGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGLGSSS*CQGPLV
Trigger: GACCAGCGGACCTTGGCAGCAGCTGCTGCTGCCCAA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTGCTTTGCTTCCTTCTaGGTCCTCTGGCCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGCFASF*VLWPSE
Trigger: CTCACTCGGCCAGAGGACGCAGAAGGAAGCAAAGCA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGALGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTAGKRF*VGDVGD
Trigger: GTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGC...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATAGKRF*VGDVGD
Trigger: GTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGC...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAAGKRF*VGDVGD
Trigger: GTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATGATGCTGCTTTTGTTTaGCAGGTTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDDAAFV*QVDRAG
Trigger: ACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCATC...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCAGGCTTCCTCCAATaGGGCTGGGGATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTPGFLQ*GWGCCF
Trigger: AAAGCAGCATCCCCAGCCCCATTGGAGGAAGCCTGG...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGCCAGGCTTCCTCCAATaGGGCTGGGGATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRPGFLQ*GWGCCF
Trigger: AAAGCAGCATCCCCAGCCCCATTGGAGGAAGCCTGG...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCCAGGCTTCCTCCAATaGGGCTGGGGATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFPGFLQ*GWGCCF
Trigger: AAAGCAGCATCCCCAGCCCCATTGGAGGAAGCCTGG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATTCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTPINSV*LLLLLP
Trigger: CGGGAGCAACAACAGCAGCCACACGGAGTTGATGGG...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVPINSV*LLLLLP
Trigger: CGGGAGCAACAACAGCAGCCACACGGAGTTGATGGG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGGGCTTCAGCCACAGTaGCGCCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMGLQPQ*RLLLAN
Trigger: GTTGGCCAACAGGAGGCGCCACTGTGGCTGAAGCCC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATGTGGGGTTCGCTGCTaGCACGGCCGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQCGVRC*HGRGHP
Trigger: GGGATGCCCGCGGCCGTGCCAGCAGCGAACCCCACA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAATTGGTCGCTTGATGTaGGGTTCGCTGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATIGRLM*GSLLAR
Trigger: CCGTGCCAGCAGCGAACCCCACATCAAGCGACCAAT...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGATTGGTCGCTTGATGTaGGGTTCGCTGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGIGRLM*GSLLAR
Trigger: CCGTGCCAGCAGCGAACCCCACATCAAGCGACCAAT...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCATTGGTCGCTTGATGTaGGGTTCGCTGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAIGRLM*GSLLAR
Trigger: CCGTGCCAGCAGCGAACCCCACATCAAGCGACCAAT...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGCACTGACAGGCTCTaGGGCCTCATTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACGTDRL*GLILAA
Trigger: AGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR CAA 72 bp CATTCATACCCAGTCATTCCCGGACAGCTTTTGCACTaGAGAATATGGCTAGAAGTTACTGGCCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HSYPVIPGQLLH*RIWLEVTGPQC
Trigger: GCACTGGGGGCCAGTAACTTCTAGCCATATTCTCAAGTGCAAAAGCTGTCCGGGAATGACTGGGTATGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 72 bp GTTCCTCTGCCCTCGAGAGGGCCAGTTTATAGGTGTTaGGAAAGGTCAGGATGGGGACAAAGAACTATGCTT +
Preference number: 4 (lower is better)
Translates to: VPLPSRGPVYRC*ERSGWGQRTML
Trigger: AAGCATAGTTCTTTGTCCCCATCCTGACCTTTCCAAACACCTATAAACTGGCCCTCTCGAGGGCAGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGTGGGAGGCCGGGTGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLWEAGC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCA...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTA +
Preference number: 4 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDQSASC*MVLTSV
Trigger: TACACTTGTCAGTACCATTCAACAAGATGCTGACTG...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCGACTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAGTC...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAGCAGCTGCCATTGTTaGCGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKSSCHC*RNELYG
Trigger: CCCGTACAGTTCATTCCGTCAACAATGGCAGCTGCT...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACATTCATTGGTCGCTTaGTGTGGGGTTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATHSLVA*CGVRCW
Trigger: CCAGCAGCGAACCCCACATCAAGCGACCAATGAATG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCATTCATTGGTCGCTTaGTGTGGGGTTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAHSLVA*CGVRCW
Trigger: CCAGCAGCGAACCCCACATCAAGCGACCAATGAATG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGTGGTGATGGGCATCTaGGGCTGTTGCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNVVMGI*GCCPTV
Trigger: CACTGTGGGGCAACAGCCTCAGATGCCCATCACCAC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGTGGTGATGGGCATCTaGGGCTGTTGCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGVVMGI*GCCPTV
Trigger: CACTGTGGGGCAACAGCCTCAGATGCCCATCACCAC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGTGGTGATGGGCATCTaGGGCTGTTGCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMVVMGI*GCCPTV
Trigger: CACTGTGGGGCAACAGCCTCAGATGCCCATCACCAC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATATCATGGTGGAGAGTTaGCGTTCTTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDIMVES*RSFSAR
Trigger: CCTTGCAGAGAAAGAACGGCAACTCTCCACCATGAT...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGTGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCCTGTTCATCATGGGCTaGCAGGAGCTGCTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACLFIMG*QELLPQ
Trigger: TTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAG...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCTGTTCATCATGGGCTaGCAGGAGCTGCTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVLFIMG*QELLPQ
Trigger: TTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCCGCTGTTTCTCGATCTaGGATGCTGCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSRCFSI*DAASFF
Trigger: GAAAAAGCTGGCAGCATCGCAGATCGAGAAACAGCG...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKRARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTTGCGATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATCGCAAG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFCCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQGSSSC*QGPLVM
Trigger: CATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGTTGGGCAGCAGCAGCTaGTGCCAAGGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQLGSSS*CQGPLV
Trigger: GACCAGCGGACCTTGGCAGCAGCTGCTGCTGCCCAA...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGTGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKCGCCC*SRWICS
Trigger: AGAACAGATCCAGCGGGAGCAACAACAGCAGCCACA...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTGCTTTGCTTCCTTCTaGGTCCTCTGGCCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRCFASF*VLWPSE
Trigger: CTCACTCGGCCAGAGGACGCAGAAGGAAGCAAAGCA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGTGCTTTGCTTCCTTCTaGGTCCTCTGGCCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTCFASF*VLWPSE
Trigger: CTCACTCGGCCAGAGGACGCAGAAGGAAGCAAAGCA...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTGCTTTGCTTCCTTCTaGGTCCTCTGGCCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFCFASF*VLWPSE
Trigger: CTCACTCGGCCAGAGGACGCAGAAGGAAGCAAAGCA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACATGCTTTGCTTCCTTCTaGGTCCTCTGGCCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATCFASF*VLWPSE
Trigger: CTCACTCGGCCAGAGGACGCAGAAGGAAGCAAAGCA...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCGCTGTACAGGCAAATaGAGAGGTGGCTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKRCTGK*RGGLLG
Trigger: TCCAAGCAAGCCACCTCTCCATTTGCCTGTACAGCG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLLGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVPINSV*LLLLLP
Trigger: CGGGAGCAACAACAGCAGCCACACGGAGTTGATGGG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLPINSV*LLLLLP
Trigger: CGGGAGCAACAACAGCAGCCACACGGAGTTGATGGG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCATTGGTCGCTTGATGTaGGGTTCGCTGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACIGRLM*GSLLAR
Trigger: CCGTGCCAGCAGCGAACCCCACATCAAGCGACCAAT...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR CAA 72 bp GGATTTCCTCGGAGTTGTCTAACAACCTGTAGAGTTTaGCAAAGATCTCCATGGATGTGCCAGCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: GFPRSCLTTCRV*QRSPWMCQLGP
Trigger: TGGTCCCAGCTGGCACATCCATGGAGATCTTTGCAAAACTCTACAGGTTGTTAGACAACTCCGAGGAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CAA 72 bp AAGAGGCATTCATACCCAGTCATTCCCGGACAGCTTTaGCACTTGAGAATATGGCTAGAAGTTACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KRHSYPVIPGQL*HLRIWLEVTGP
Trigger: GGGGCCAGTAACTTCTAGCCATATTCTCAAGTGCAAAAGCTGTCCGGGAATGACTGGGTATGAATGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 72 bp GCTTCTTTGTCAATAGATGGGAATCTGCAGGAAGCCTaGACTTTTCCATCCCTCCCAGAATCCCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ASLSIDGNLQEA*TFPSLPESLFL
Trigger: GAGGAACAGGGATTCTGGGAGGGATGGAAAAGTCAAGGCTTCCTGCAGATTCCCATCTATTGACAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 72 bp AATGTCCCTAGAGTTTCAAGGGTCACACCCACAGTGTaGCTATGGGAACCAATGCACAGTACCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: NVPRVSRVTPTV*LWEPMHSTLAT
Trigger: TGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCCTTGAAACTCTAGGGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCGGCAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTGCC...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAEKLGS*AEACAP
Trigger: AGGGGCACATGCCTCCGCTCATGATCCCAATTTTTC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVEKLGS*AEACAP
Trigger: AGGGGCACATGCCTCCGCTCATGATCCCAATTTTTC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGAGCAGCTGCCATTGTTaGCGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTSSCHC*RNELYG
Trigger: CCCGTACAGTTCATTCCGTCAACAATGGCAGCTGCT...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCAGCAGCTGCCATTGTTaGCGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGASSCHC*RNELYG
Trigger: CCCGTACAGTTCATTCCGTCAACAATGGCAGCTGCT...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVIFRAS*MAFITV
Trigger: CACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGAT...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCATTCATTGGTCGCTTaGTGTGGGGTTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVHSLVA*CGVRCW
Trigger: CCAGCAGCGAACCCCACATCAAGCGACCAATGAATG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAGTGGTGATGGGCATCTaGGGCTGTTGCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQVVMGI*GCCPTV
Trigger: CACTGTGGGGCAACAGCCTCAGATGCCCATCACCAC...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCCAGTCAGATGTCATCTaGGGTGATGGTGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVQSDVI*GDGVVV
Trigger: AACGACCACACCATCACCTCAGATGACATCTGACTG...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACATACGTGCTCTGGATaGCAGGGAGGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAHTCSG*QGGWAR
Trigger: CCGAGCCCAGCCTCCCTGTCATCCAGAGCACGTATG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCAAGTCCTGGGTCATTaGTTCCTCTCCATCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVQVLGH*FLSIRC
Trigger: ACAGCGGATGGAGAGGAAGCAATGACCCAGGACTTG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACAAGTCCTGGGTCATTaGTTCCTCTCCATCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATQVLGH*FLSIRC
Trigger: ACAGCGGATGGAGAGGAAGCAATGACCCAGGACTTG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATRARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCTTGCGATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATCGCAAG...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTTGGGCAGCAGCAGCTaGTGCCAAGGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSLGSSS*CQGPLV
Trigger: GACCAGCGGACCTTGGCAGCAGCTGCTGCTGCCCAA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTTTGGGCAGCAGCAGCTaGTGCCAAGGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGALGSSS*CQGPLV
Trigger: GACCAGCGGACCTTGGCAGCAGCTGCTGCTGCCCAA...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGCGCCC*SRWICS
Trigger: AGAACAGATCCAGCGGGAGCAACAACAGCAGCCACA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGTGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTCGCCC*SRWICS
Trigger: AGAACAGATCCAGCGGGAGCAACAACAGCAGCCACA...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFCGCCC*SRWICS
Trigger: AGAACAGATCCAGCGGGAGCAACAACAGCAGCCACA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGCATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTGGGCCTCATTCTCGCTaGTATAGTCTGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFGPHSR*YSLIWD
Trigger: ATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCC...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATACCTGCTGGATCTGTTaGTGCAGGAGATTAATCTTG +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDTCWIC*CRRLIL
Trigger: CAAGATTAATCTCCTGCAGCAACAGATCCAGCAGGT...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCGCTGTACAGGCAAATaGAGAGGTGGCTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFRCTGK*RGGLLG
Trigger: TCCAAGCAAGCCACCTCTCCATTTGCCTGTACAGCG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGCGCTGTACAGGCAAATaGAGAGGTGGCTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRRCTGK*RGGLLG
Trigger: TCCAAGCAAGCCACCTCTCCATTTGCCTGTACAGCG...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGRKLIS*VIMVES
Trigger: ACTCTCCACCATGATTACCCAGCTGATCAGCTTGCG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNLGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGAGKRF*VGDVGD
Trigger: GTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGGATGCTGCTTTTGTTTaGCAGGTTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKDAAFV*QVDRAG
Trigger: ACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCATC...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGTGTTGTTGCTCCCGCTaGATCTGTTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKCCCSR*ICSRIF
Trigger: GAAGATGCGAGAACAGATCCAGCGGGAGCAACAACA...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTGTTGTTGCTCCCGCTaGATCTGTTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGCCCSR*ICSRIF
Trigger: GAAGATGCGAGAACAGATCCAGCGGGAGCAACAACA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATGACTTTCCTGTTAATTaGGGACCCAGGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDDFPVN*GPRFSK
Trigger: CTTTGAGAACCTGGGTCCCCAATTAACAGGAAAGTC...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGGGCTTCAGCCACAGTaGCGCCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAGLQPQ*RLLLAN
Trigger: GTTGGCCAACAGGAGGCGCCACTGTGGCTGAAGCCC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGGGCACTGACAGGCTCTaGGGCCTCATTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGGTDRL*GLILAA
Trigger: AGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCC...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCTCTTCCTTTTCCCTTaGGGTCAAGTCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFLFLFP*GQVLGH
Trigger: ATGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGGCAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTGCC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGACTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAGTC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGGTCAGGCTTATGTGGTaGGGTAGACGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGVRLMW*GRRISE
Trigger: TTCCGAAATACGTCTACCTCACCACATAAGCCTGAC...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVEKLGS*AEACAP
Trigger: AGGGGCACATGCCTCCGCTCATGATCCCAATTTTTC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCATGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGGTTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGVSSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAAC...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSTGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATIFRAS*MAFITV
Trigger: CACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGAT...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACATTCATTGGTCGCTTaGTGTGGGGTTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGHSLVA*CGVRCW
Trigger: CCAGCAGCGAACCCCACATCAAGCGACCAATGAATG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGCATTCATTGGTCGCTTaGTGTGGGGTTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMHSLVA*CGVRCW
Trigger: CCAGCAGCGAACCCCACATCAAGCGACCAATGAATG...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGATGTCAGGGAAGGCCTaGAGAATTTTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKMSGKA*RIFLLS
Trigger: CGAAAGGAGGAAAATTCTTCAGGCCTTCCCTGACAT...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCGTGGTGATGGGCATCTaGGGCTGTTGCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSVVMGI*GCCPTV
Trigger: CACTGTGGGGCAACAGCCTCAGATGCCCATCACCAC...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFRCHLR*WCGRCH
Trigger: ATGGCAACGACCACACCATCACCTCAGATGACATCT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGARCHLR*WCGRCH
Trigger: ATGGCAACGACCACACCATCACCTCAGATGACATCT...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATRCHLR*WCGRCH
Trigger: ATGGCAACGACCACACCATCACCTCAGATGACATCT...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCAGTCAGATGTCATCTaGGGTGATGGTGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAQSDVI*GDGVVV
Trigger: AACGACCACACCATCACCTCAGATGACATCTGACTG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVLPFFL*KALRCT
Trigger: GGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTTGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQWAARS*SRKLIS
Trigger: GCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCGCTGTTTCTCGATCTaGGATGCTGCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFRCFSI*DAASFF
Trigger: GAAAAAGCTGGCAGCATCGCAGATCGAGAAACAGCG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLRARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCCTTGCGATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATCGCAAG...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: DQERQWRTHTSRPATYSDRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVCGCCC*SRWICS
Trigger: AGAACAGATCCAGCGGGAGCAACAACAGCAGCCACA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATGCTTTGCTTCCTTCTaGGTCCTCTGGCCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGCFASF*VLWPSE
Trigger: CTCACTCGGCCAGAGGACGCAGAAGGAAGCAAAGCA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATTGCTTTGCTTCCTTCTaGGTCCTCTGGCCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNCFASF*VLWPSE
Trigger: CTCACTCGGCCAGAGGACGCAGAAGGAAGCAAAGCA...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGAGCCATTCATTGCTTTaGTTCCTTCTGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGSHSLL*FLLRPL
Trigger: CAGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCT...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTGCAGAGCCATTCATTaGTTTGCTTCCTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGCRAIH*FASFCV
Trigger: GACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGTGCAGAGCCATTCATTaGTTTGCTTCCTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKCRAIH*FASFCV
Trigger: GACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCA...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVSLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACTTGAGGTCAAGTCCTaGGTCATTGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATLEVKS*VIASSP
Trigger: TGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGCTTGAGGTCAAGTCCTaGGTCATTGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGLEVKS*VIASSP
Trigger: TGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAG...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTCCTTGGGTTAATTTGTaGGTGGGAAACATGACCCTT +
Preference number: 4 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFPWVNL*VGNMTL
Trigger: AAGGGTCATGTTTCCCACCCACAAATTAACCCAAGG...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072804.11
CDS-3UTR CCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGATGCTGCTTTTGTTTaGCAGGTTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFDAAFV*QVDRAG
Trigger: ACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCATC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCTTCCTCCAATGGGGCTaGGGATGCTGCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAFLQWG*GCCFCL
Trigger: CAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAA...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGTTCCTCCAATGGGGCTaGGGATGCTGCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTFLQWG*GCCFCL
Trigger: CAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAA...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACATCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQPINSV*LLLLLP
Trigger: CGGGAGCAACAACAGCAGCCACACGGAGTTGATGGG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTAGTGGCGCCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVSGASC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACT...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCATTGGTCGCTTGATGTaGGGTTCGCTGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPIGRLM*GSLLAR
Trigger: CCGTGCCAGCAGCGAACCCCACATCAAGCGACCAAT...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGGCACTGACAGGCTCTaGGGCCTCATTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAGTDRL*GLILAA
Trigger: AGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR CAA 72 bp GAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTaGTCCGGTTTCACAATACGAAATCCTCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: EHVLYAAAHAVD*SGFTIRNPQLF
Trigger: AAACAACTGAGGATTTCGTATTGTGAAACCGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CAA 72 bp AGGCAAACACAATTGGGTTCACGCACTGTGGCAGCCTaGCTCATTCCTTACAATATCTTGTCTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: RQTQLGSRTVAA*LIPYNILSPDS
Trigger: GGAATCTGGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAATTGTGTTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGACTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAGTC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGTCAGGCTTATGTGGTaGGGTAGACGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFVRLMW*GRRISE
Trigger: TTCCGAAATACGTCTACCTCACCACATAAGCCTGAC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCCATTGTTGACGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKPLLTE*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCGTCAACAATGG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCCATTGTTGACGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGPLLTE*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCGTCAACAATGG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTAGCAGCTGCCATTGTTaGCGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFSSCHC*RNELYG
Trigger: CCCGTACAGTTCATTCCGTCAACAATGGCAGCTGCT...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTTTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGTTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFVSSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAAC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKTGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAATGTCAGGGAAGGCCTaGAGAATTTTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATMSGKA*RIFLLS
Trigger: CGAAAGGAGGAAAATTCTTCAGGCCTTCCCTGACAT...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTATGTCAGGGAAGGCCTaGAGAATTTTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFMSGKA*RIFLLS
Trigger: CGAAAGGAGGAAAATTCTTCAGGCCTTCCCTGACAT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTA +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGLAAIV*FGIIFV
Trigger: TACGAAGATGATCCCAAATCAGACTATAGCAGCGAG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVLPFFL*KALRCT
Trigger: GGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTATCATGGTGGAGAGTTaGCGTTCTTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFIMVES*RSFSAR
Trigger: CCTTGCAGAGAAAGAACGGCAACTCTCCACCATGAT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCGCTGTTTCTCGATCTaGGATGCTGCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVRCFSI*DAASFF
Trigger: GAAAAAGCTGGCAGCATCGCAGATCGAGAAACAGCG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNRARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTCTTGCGATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATCGCAAG...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACTTGCGATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATCGCAAG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCTTGCGATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATCGCAAG...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGTTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAGGGGTCCAAATTCCTaGCAAAACGGTCACTTATGC +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATRGPNS*QNGHLC
Trigger: GCATAAGTGACCGTTTTGGCAGGAATTTGGACCCCT...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000166207.3
ENSMUST00000205405.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAGGGGTCCAAATTCCTaGCAAAACGGTCACTTATGC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFRGPNS*QNGHLC
Trigger: GCATAAGTGACCGTTTTGGCAGGAATTTGGACCCCT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000166207.3
ENSMUST00000205405.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGTTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGAGCCATTCATTGCTTTaGTTCCTTCTGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRSHSLL*FLLRPL
Trigger: CAGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCT...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTAGCCATTCATTGCTTTaGTTCCTTCTGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVSHSLL*FLLRPL
Trigger: CAGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCT...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCTGCAGAGCCATTCATTaGTTTGCTTCCTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGACRAIH*FASFCV
Trigger: GACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCA...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFSLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGSLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVSLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCATCCACGATGCATGTaGGCTTCGGCCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSHPRCM*ASAGVC
Trigger: ACAAACCCCGGCCGAAGCGCACATGCATCGTGGATG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSRERIS*LYSPIR
Trigger: CCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGGGCCTCATTCTCGCTaGTATAGTCTGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAGPHSR*YSLIWD
Trigger: ATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAGGGCCTCATTCTCGCTaGTATAGTCTGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATGPHSR*YSLIWD
Trigger: ATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCC...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGACCTGCTGGATCTGTTaGTGCAGGAGATTAATCTTG +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKTCWIC*CRRLIL
Trigger: CAAGATTAATCTCCTGCAGCAACAGATCCAGCAGGT...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCTTGAGGTCAAGTCCTaGGTCATTGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLLEVKS*VIASSP
Trigger: TGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCTTGAGGTCAAGTCCTaGGTCATTGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVLEVKS*VIASSP
Trigger: TGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCCGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACRKLIS*VIMVES
Trigger: ACTCTCCACCATGATTACCCAGCTGATCAGCTTGCG...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGALGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACTGGGTGGGAGATGTTaGGGACTTCACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEALGGRC*GLHRLC
Trigger: GCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCAGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTTCCTCCAATGGGGCTaGGGATGCTGCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACFLQWG*GCCFCL
Trigger: CAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACCAGGCTTCCTCCAATaGGGCTGGGGATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAPGFLQ*GWGCCF
Trigger: AAAGCAGCATCCCCAGCCCCATTGGAGGAAGCCTGG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAGGCACTGACAGGCTCTaGGGCCTCATTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTGTDRL*GLILAA
Trigger: AGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCC...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGGCACTGACAGGCTCTaGGGCCTCATTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQGTDRL*GLILAA
Trigger: AGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR CAA 72 bp TTCTACACATTGAAACAAATGGAATTCCGAGGCCTTTaGAACATGTTCTATATGCAGCCGCTCACGCCGTGG +
Preference number: 4 (lower is better)
Translates to: FYTLKQMEFRGL*NMFYMQPLTPW
Trigger: CCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTTCAATGTGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
3UTR CAA 72 bp AGAGCACTCACAGCTAATGACTCAGCTGGTCATCTCTaGGCTAGACCTACTTTATTGCTATTAGCTATGGCC +
Preference number: 4 (lower is better)
Translates to: RALTANDSAGHL*ARPTLLLLAMA
Trigger: GGCCATAGCTAATAGCAATAAAGTAGGTCTAGCCAAGAGATGACCAGCTGAGTCATTAGCTGTGAGTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGGCAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTGCC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGGCAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTGCC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTA +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKQSASC*MVLTSV
Trigger: TACACTTGTCAGTACCATTCAACAAGATGCTGACTG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGTCAGGCTTATGTGGTaGGGTAGACGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVVRLMW*GRRISE
Trigger: TTCCGAAATACGTCTACCTCACCACATAAGCCTGAC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGTCAGGCTTATGTGGTaGGGTAGACGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACVRLMW*GRRISE
Trigger: TTCCGAAATACGTCTACCTCACCACATAAGCCTGAC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGCCATTGTTGACGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGPLLTE*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCGTCAACAATGG...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCCATTGTTGACGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVPLLTE*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCGTCAACAATGG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCCATTGTTGACGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAPLLTE*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCGTCAACAATGG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGAGCAGCTGCCATTGTTaGCGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQSSCHC*RNELYG
Trigger: CCCGTACAGTTCATTCCGTCAACAATGGCAGCTGCT...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGATGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMIFRAS*MAFITV
Trigger: CACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGAT...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACATTCATTGGTCGCTTaGTGTGGGGTTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAHSLVA*CGVRCW
Trigger: CCAGCAGCGAACCCCACATCAAGCGACCAATGAATG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMRCHLR*WCGRCH
Trigger: ATGGCAACGACCACACCATCACCTCAGATGACATCT...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACAGTCAGATGTCATCTaGGGTGATGGTGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGQSDVI*GDGVVV
Trigger: AACGACCACACCATCACCTCAGATGACATCTGACTG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGCTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTA +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRLAAIV*FGIIFV
Trigger: TACGAAGATGATCCCAAATCAGACTATAGCAGCGAG...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTA +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVLAAIV*FGIIFV
Trigger: TACGAAGATGATCCCAAATCAGACTATAGCAGCGAG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACAAGTCCTGGGTCATTaGTTCCTCTCCATCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQQVLGH*FLSIRC
Trigger: ACAGCGGATGGAGAGGAAGCAATGACCCAGGACTTG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMLPFFL*KALRCT
Trigger: GGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATTTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNLPFFL*KALRCT
Trigger: GGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAA...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATCATGGTGGAGAGTTaGCGTTCTTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLIMVES*RSFSAR
Trigger: CCTTGCAGAGAAAGAACGGCAACTCTCCACCATGAT...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGTTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACGCTGTTTCTCGATCTaGGATGCTGCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGRCFSI*DAASFF
Trigger: GAAAAAGCTGGCAGCATCGCAGATCGAGAAACAGCG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGCGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQRARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGCGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGRARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQRARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGCTTGCGATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATCGCAAG...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVCCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCTTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EAIKTILLMYCGATNACGLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KTILLMYCGATNACGLFKRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTAGGGGTCCAAATTCCTaGCAAAACGGTCACTTATGC +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVRGPNS*QNGHLC
Trigger: GCATAAGTGACCGTTTTGGCAGGAATTTGGACCCCT...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000166207.3
ENSMUST00000205405.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGTGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGCGCCC*SRWICS
Trigger: AGAACAGATCCAGCGGGAGCAACAACAGCAGCCACA...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATTTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCAGCCATTCATTGCTTTaGTTCCTTCTGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACSHSLL*FLLRPL
Trigger: CAGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCT...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTGCAGAGCCATTCATTaGTTTGCTTCCTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACCRAIH*FASFCV
Trigger: GACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGGGCCTCATTCTCGCTaGTATAGTCTGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVGPHSR*YSLIWD
Trigger: ATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQAGKRF*VGDVGD
Trigger: GTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGATGCTGCTTTTGTTTaGCAGGTTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGDAAFV*QVDRAG
Trigger: ACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCATC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATTCCTCCAATGGGGCTaGGGATGCTGCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGFLQWG*GCCFCL
Trigger: CAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCCAGGCTTCCTCCAATaGGGCTGGGGATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIPGFLQ*GWGCCF
Trigger: AAAGCAGCATCCCCAGCCCCATTGGAGGAAGCCTGG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTTGTTGTTGCTCCCGCTaGATCTGTTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFCCCSR*ICSRIF
Trigger: GAAGATGCGAGAACAGATCCAGCGGGAGCAACAACA...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATGTTGTTGCTCCCGCTaGATCTGTTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGCCCSR*ICSRIF
Trigger: GAAGATGCGAGAACAGATCCAGCGGGAGCAACAACA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIPINSV*LLLLLP
Trigger: CGGGAGCAACAACAGCAGCCACACGGAGTTGATGGG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGCCCCATGTTGTTCATaGAGGACAGTTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACAPCCS*RTVSHQ
Trigger: TTGATGGGAAACTGTCCTCCATGAACAACATGGGGC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGACTTTCCTGTTAATTaGGGACCCAGGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGADFPVN*GPRFSK
Trigger: CTTTGAGAACCTGGGTCCCCAATTAACAGGAAAGTC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATAGTGGCGCCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNSGASC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACT...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGAGTGGCGCCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMSGASC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACT...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTATTGGTCGCTTGATGTaGGGTTCGCTGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIIGRLM*GSLLAR
Trigger: CCGTGCCAGCAGCGAACCCCACATCAAGCGACCAAT...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR CAA 72 bp CCAGTTGACAAAGAAAGACCTGAGCCTGTGAGTTCTTaGATGGAGACAAACCTGGGCTCTGATTTAAAGCTA +
Preference number: 4 (lower is better)
Translates to: PVDKERPEPVSS*METNLGSDLKL
Trigger: TAGCTTTAAATCAGAGCCCAGGTTTGTCTCCATCAAAGAACTCACAGGCTCAGGTCTTTCTTTGTCAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
3UTR CAA 72 bp GCCATCATCTCAACTGATTCTTCTAGACACAGATCTTaGCTGTTGTTGGCACTTGGTACAGGACTTCTATGG +
Preference number: 4 (lower is better)
Translates to: AIISTDSSRHRS*LLLALGTGLLW
Trigger: CCATAGAAGTCCTGTACCAAGTGCCAACAACAGCAAAGATCTGTGTCTAGAAGAATCAGTTGAGATGATGGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGGGCAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTGCC...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LTRYEAIKTILLMYCGATQSASC*MVLTSV
Trigger: TACACTTGTCAGTACCATTCAACAAGATGCTGACTG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGTCAGGCTTATGTGGTaGGGTAGACGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGVRLMW*GRRISE
Trigger: TTCCGAAATACGTCTACCTCACCACATAAGCCTGAC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTCTCAGGTGTACCTTTaGTTTCTCCAAGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFSQVYL*FLQEVH
Trigger: GTGAACTTCTTGGAGAAATCAAAGGTACACCTGAGA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAEKLGS*AEACAP
Trigger: AGGGGCACATGCCTCCGCTCATGATCCCAATTTTTC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTAGCAGCTGCCATTGTTaGCGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGASSCHC*RNELYG
Trigger: CCCGTACAGTTCATTCCGTCAACAATGGCAGCTGCT...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGCAGCTGCCATTGTTaGCGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSSSCHC*RNELYG
Trigger: CCCGTACAGTTCATTCCGTCAACAATGGCAGCTGCT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTTTTATCCCAGTAGGTaGGACTGCCCCTGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSFYPSR*DCPCRV
Trigger: AACTCGGCAGGGGCAGTCTCACCTACTGGGATAAAA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCAGTTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPVSSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAAC...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLTGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAATGTCAGGGAAGGCCTaGAGAATTTTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGMSGKA*RIFLLS
Trigger: CGAAAGGAGGAAAATTCTTCAGGCCTTCCCTGACAT...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQRCHLR*WCGRCH
Trigger: ATGGCAACGACCACACCATCACCTCAGATGACATCT...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCCTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTA +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACLAAIV*FGIIFV
Trigger: TACGAAGATGATCCCAAATCAGACTATAGCAGCGAG...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCAAGTCCTGGGTCATTaGTTCCTCTCCATCCGCTGT +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGAQVLGH*FLSIRC
Trigger: ACAGCGGATGGAGAGGAAGCAATGACCCAGGACTTG...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGTTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQLPFFL*KALRCT
Trigger: GGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAA...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGTTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGLPFFL*KALRCT
Trigger: GGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAA...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAATCATGGTGGAGAGTTaGCGTTCTTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGIMVES*RSFSAR
Trigger: CCTTGCAGAGAAAGAACGGCAACTCTCCACCATGAT...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACGAGCAAGGTCCATTTaGTGCCGCTGTTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEARARSI*CRCFSI
Trigger: GATCGAGAAACAGCGGCAGCAAATGGACCTTGCTCG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACCCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: LMYCGATNACGLFKNFVVCCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TIYACTSITSEMFPGALGRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGSLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCCTTGAGGTCAAGTCCTaGGTCATTGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPLEVKS*VIASSP
Trigger: TGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAG...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGCGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQRKLIS*VIMVES
Trigger: ACTCTCCACCATGATTACCCAGCTGATCAGCTTGCG...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCGATGCTGCTTTTGTTTaGCAGGTTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPDAAFV*QVDRAG
Trigger: ACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCATC...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAATCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQSEPPE*LSSLCP
Trigger: AGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGA...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGCCCCATGTTGTTCATaGAGGACAGTTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMAPCCS*RTVSHQ
Trigger: TTGATGGGAAACTGTCCTCCATGAACAACATGGGGC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCCATGTTGTTCATaGAGGACAGTTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGAPCCS*RTVSHQ
Trigger: TTGATGGGAAACTGTCCTCCATGAACAACATGGGGC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGACTTTCCTGTTAATTaGGGACCCAGGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLDFPVN*GPRFSK
Trigger: CTTTGAGAACCTGGGTCCCCAATTAACAGGAAAGTC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCGGGTACTTCTCTAGGTaGATTTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSGYFSR*ILLSRA
Trigger: GGCCCGGCTAAGCAAAATCCACCTAGAGAAGTACCC...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTCTTCCTTTTCCCTTaGGGTCAAGTCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGALFLFP*GQVLGH
Trigger: ATGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAG...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTA +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACQSASC*MVLTSV
Trigger: TACACTTGTCAGTACCATTCAACAAGATGCTGACTG...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGACTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEADSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAGTC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTCTCAGGTGTACCTTTaGTTTCTCCAAGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACSQVYL*FLQEVH
Trigger: GTGAACTTCTTGGAGAAATCAAAGGTACACCTGAGA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIEKLGS*AEACAP
Trigger: AGGGGCACATGCCTCCGCTCATGATCCCAATTTTTC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAGTTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQVSSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAAC...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGGTTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGVSSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAAC...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGTGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGAIFRAS*MAFITV
Trigger: CACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGAT...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSIFRAS*MAFITV
Trigger: CACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGAT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGARCHLR*WCGRCH
Trigger: ATGGCAACGACCACACCATCACCTCAGATGACATCT...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEARCHLR*WCGRCH
Trigger: ATGGCAACGACCACACCATCACCTCAGATGACATCT...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTA +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGLAAIV*FGIIFV
Trigger: TACGAAGATGATCCCAAATCAGACTATAGCAGCGAG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTA +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNLAAIV*FGIIFV
Trigger: TACGAAGATGATCCCAAATCAGACTATAGCAGCGAG...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEALPFFL*KALRCT
Trigger: GGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGATCATGGTGGAGAGTTaGCGTTCTTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQIMVES*RSFSAR
Trigger: CCTTGCAGAGAAAGAACGGCAACTCTCCACCATGAT...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCGCTGTTTCTCGATCTaGGATGCTGCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGARCFSI*DAASFF
Trigger: GAAAAAGCTGGCAGCATCGCAGATCGAGAAACAGCG...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCATGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPCCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: YEAIKTILLMYCGATNACRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQCGCCC*SRWICS
Trigger: AGAACAGATCCAGCGGGAGCAACAACAGCAGCCACA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGAGCCATTCATTGCTTTaGTTCCTTCTGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQSHSLL*FLLRPL
Trigger: CAGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCT...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGGGGCCTCATTCTCGCTaGTATAGTCTGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQGPHSR*YSLIWD
Trigger: ATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCC...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAACCTGCTGGATCTGTTaGTGCAGGAGATTAATCTTG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGTCWIC*CRRLIL
Trigger: CAAGATTAATCTCCTGCAGCAACAGATCCAGCAGGT...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATACCTGCTGGATCTGTTaGTGCAGGAGATTAATCTTG +
Preference number: 4 (lower is better)
Translates to: TRYEAIKTILLMYCGATNTCWIC*CRRLIL
Trigger: CAAGATTAATCTCCTGCAGCAACAGATCCAGCAGGT...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEARKLIS*VIMVES
Trigger: ACTCTCCACCATGATTACCCAGCTGATCAGCTTGCG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSRKLIS*VIMVES
Trigger: ACTCTCCACCATGATTACCCAGCTGATCAGCTTGCG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGCTGCCAAGGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQAAKVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACCTTGGCAGC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACCTTGGGTTAATTTGTaGGTGGGAAACATGACCCTT +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGPWVNL*VGNMTL
Trigger: AAGGGTCATGTTTCCCACCCACAAATTAACCCAAGG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000166207.3
ENSMUST00000205405.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQGRGSG*EMLGTS
Trigger: TGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTGATGCTGCTTTTGTTTaGCAGGTTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGADAAFV*QVDRAG
Trigger: ACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCATC...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTTCCTCCAATGGGGCTaGGGATGCTGCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSFLQWG*GCCFCL
Trigger: CAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGACTTTCCTGTTAATTaGGGACCCAGGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGDFPVN*GPRFSK
Trigger: CTTTGAGAACCTGGGTCCCCAATTAACAGGAAAGTC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGACTTTCCTGTTAATTaGGGACCCAGGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFDFPVN*GPRFSK
Trigger: CTTTGAGAACCTGGGTCCCCAATTAACAGGAAAGTC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGTGGCGCCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSSGASC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
3UTR CAA 72 bp TCAACTGATTCTTCTAGACACAGATCTTTGCTGTTGTaGGCACTTGGTACAGGACTTCTATGGCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: STDSSRHRSLLL*ALGTGLLWLKT
Trigger: AGTTTTGAGCCATAGAAGTCCTGTACCAAGTGCCAACAACAGCAAAGATCTGTGTCTAGAAGAATCAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACACTCTTCCTTTTCCCTTaGGGTCAAGTCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTLFLFP*GQVLGH
Trigger: ATGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAG...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTCTTCCTTTTCCCTTaGGGTCAAGTCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTILFLFP*GQVLGH
Trigger: ATGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTA +
Preference number: 4 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGQSASC*MVLTSV
Trigger: TACACTTGTCAGTACCATTCAACAAGATGCTGACTG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGACTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAGTC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGTCAGGCTTATGTGGTaGGGTAGACGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAVRLMW*GRRISE
Trigger: TTCCGAAATACGTCTACCTCACCACATAAGCCTGAC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGTTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAVSSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAAC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPTGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQTGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCAGTCAGATGTCATCTaGGGTGATGGTGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIQSDVI*GDGVVV
Trigger: AACGACCACACCATCACCTCAGATGACATCTGACTG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IKTILLMYCGATNACGLFKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLMYCGATNACGLFKNFVKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTATCATGGTGGAGAGTTaGCGTTCTTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGAIMVES*RSFSAR
Trigger: CCTTGCAGAGAAAGAACGGCAACTCTCCACCATGAT...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAATTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAATTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGTTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ENVICLTRYEAIKTILLMLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACATTTCCTTCTCAGTCCTaGAGTTGCTCAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTFPSQS*SCSAPC
Trigger: ACATGGGGCTGAGCAACTGCAGGACTGAGAAGGAAA...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAAGCCATTCATTGCTTTaGTTCCTTCTGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEASHSLL*FLLRPL
Trigger: CAGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCT...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATGCAGAGCCATTCATTaGTTTGCTTCCTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEACRAIH*FASFCV
Trigger: GACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGACCTGCTGGATCTGTTaGTGCAGGAGATTAATCTTG +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGTCWIC*CRRLIL
Trigger: CAAGATTAATCTCCTGCAGCAACAGATCCAGCAGGT...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTTGAGGTCAAGTCCTaGGTCATTGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTILEVKS*VIASSP
Trigger: TGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACACGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTRKLIS*VIMVES
Trigger: ACTCTCCACCATGATTACCCAGCTGATCAGCTTGCG...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTGAGAGATTCAGCGGCTaGGCTGTTGTTTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGAERFSG*AVVSSL
Trigger: TAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTC...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTTGTTGTTGCTCCCGCTaGATCTGTTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTICCCSR*ICSRIF
Trigger: GAAGATGCGAGAACAGATCCAGCGGGAGCAACAACA...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGCCCCATGTTGTTCATaGAGGACAGTTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAAPCCS*RTVSHQ
Trigger: TTGATGGGAAACTGTCCTCCATGAACAACATGGGGC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQQSASC*MVLTSV
Trigger: TACACTTGTCAGTACCATTCAACAAGATGCTGACTG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTA +
Preference number: 4 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGQSASC*MVLTSV
Trigger: TACACTTGTCAGTACCATTCAACAAGATGCTGACTG...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAATCTCAGGTGTACCTTTaGTTTCTCCAAGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQSQVYL*FLQEVH
Trigger: GTGAACTTCTTGGAGAAATCAAAGGTACACCTGAGA...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCCATTGTTGACGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: KTTIYACTSITSEMFPGAPLLTE*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCGTCAACAATGG...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGTTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIVSSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAAC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTA +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSTGQES*DWIVYL
Trigger: TAGATATACTATCCAGTCTCAACTCTCCTGCCCTGT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTA +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEALAAIV*FGIIFV
Trigger: TACGAAGATGATCCCAAATCAGACTATAGCAGCGAG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: QENVICLTRYEAIKTILLKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEAFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTTGCTGCTGTTGTCTTaGGATCTGTTCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSLLLLS*DLFLLL
Trigger: CAACAGCAAGAACAGATCGCAAGACAACAGCAGCAA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEACCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTGCTGTAGAAGTTGCTaGTGTTGTCTTGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSCCRSC*CCLAIC
Trigger: ACAGATCGCAAGACAACAGCAGCAACTTCTACAGCA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGTTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAATTAATCTTGTGCTGCTaGTGTAGAAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQLILCC*CRSCCC
Trigger: ACAGCAGCAACTTCTACAGCAGCAGCACAAGATTAA...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAAGCCATTCATTGCTTTaGTTCCTTCTGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTSHSLL*FLLRPL
Trigger: CAGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCT...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR GCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTTGCAGAGCCATTCATTaGTTTGCTTCCTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTICRAIH*FASFCV
Trigger: GACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCA...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTTCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTISLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATCTCTAGGTGGATTTTaGTTAGCCGGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQSLGGF*LAGPVL
Trigger: AAGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQGPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCCTTGGGTTAATTTGTaGGTGGGAAACATGACCCTT +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSPWVNL*VGNMTL
Trigger: AAGGGTCATGTTTCCCACCCACAAATTAACCCAAGG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000166207.3
ENSMUST00000205405.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGACTTTCCTGTTAATTaGGGACCCAGGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEADFPVN*GPRFSK
Trigger: CTTTGAGAACCTGGGTCCCCAATTAACAGGAAAGTC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATCTCAGGTGTACCTTTaGTTTCTCCAAGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LKFMKNQENVICLTRYEASQVYL*FLQEVH
Trigger: GTGAACTTCTTGGAGAAATCAAAGGTACACCTGAGA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTTTTCTCGATCTGCGATaGTGCCAGCTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIFLDLR*CQLFLF
Trigger: GAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGGGGTAGTTATCACCTaGCTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIGVVIT*LVCYSR
Trigger: CCTGGAATAACATACAAGCCAGGTGATAACTACCCC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCCTTGGGTTAATTTGTaGGTGGGAAACATGACCCTT +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTIPWVNL*VGNMTL
Trigger: AAGGGTCATGTTTCCCACCCACAAATTAACCCAAGG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000166207.3
ENSMUST00000205405.2
ENSMUST00000206369.2
3UTR CAA 72 bp AACTATGCTTGCAATGTCATGATTTTCAATCTACTTTaGCTGTGCAGATGCACGATCATGTGCAGCATTAGA +
Preference number: 4 (lower is better)
Translates to: NYACNVMIFNLL*LCRCTIMCSIR
Trigger: TCTAATGCTGCACATGATCGTGCATCTGCACAGCAAAAGTAGATTGAAAATCATGACATTGCAAGCATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR TCA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTTCTCAGGTGTACCTTTaGTTTCTCCAAGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KNQENVICLTRYEAIKTISQVYL*FLQEVH
Trigger: GTGAACTTCTTGGAGAAATCAAAGGTACACCTGAGA...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR TCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATCTCAGGTGTACCTTTaGTTTCTCCAAGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQSQVYL*FLQEVH
Trigger: GTGAACTTCTTGGAGAAATCAAAGGTACACCTGAGA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAAGGAGATTAATCTTGTaGTGCTGCTGTAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQRRLIL*CCCRSC
Trigger: GCAACTTCTACAGCAGCAGCACAAGATTAATCTCCT...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR GCA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 90 bp GGCAGCAGCAGCTGCTGCCAAGGTCCGCTGGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCATGTGCCCCTGAACCTGGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: GSSSCCQGPLVMWKN*DHERRHVPLNLDLL
Trigger: CAACAGATCCAGGTTCAGGGGCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000205479.2
CDS TCA 90 bp CAGCTGCTGCCAAGGTCCGCTGGTCATGTGGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCTGAACCTGGATCTGTTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: QLLPRSAGHVEKLGS*AEACAPEPGSVAAG
Trigger: TCCTGCAGCAACAGATCCAGGTTCAGGGGCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACCTTGGCAGCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000205479.2
CDS CCA 90 bp TTTGGCAGGTTGACAGGGCTGGTTTTGCTGGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGACTTCACAGGCTCTGCTGTCTTAGGC +
Preference number: 5 (lower is better)
Translates to: FGRLTGLVLLAGKRF*VGDVGDFTGSAVLG
Trigger: GCCTAAGACAGCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAACCTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPASVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPSRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS TCA 90 bp CTGGGCTCGGGGCTGGCAGAGGTGCTAGAGCAGTCAGATGTCATCTaGGGTGATGGTGTGGTCGTTGCCATAGTAATAGCACCAGGATAC +
Preference number: 5 (lower is better)
Translates to: LGSGLAEVLEQSDVI*GDGVVVAIVIAPGY
Trigger: GTATCCTGGTGCTATTACTATGGCAACGACCACACCATCACCTCAGATGACATCTGACTGCTCTAGCACCTCTGCCAGCCCCGAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 90 bp GAGGAATCCTCTTGTTCTGTCCGAGTCATCTCCTCCAGCTTCTTCTaGTTCAGCGTATCCACCACATCGGCAAGGCTCCCTTTGCGGCGT +
Preference number: 5 (lower is better)
Translates to: EESSCSVRVISSSFF*FSVSTTSARLPLRR
Trigger: ACGCCGCAAAGGGAGCCTTGCCGATGTGGTGGATACGCTGAAGCAGAAGAAGCTGGAGGAGATGACTCGGACAGAACAAGAGGATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 90 bp TGCGATGCTGCCAGCTTTTTCTGTTCATCATGGGCTGCCAGGAGCTaGTCCCGCAAGCTGATCAGCTGGGTAATCATGGTGGAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: CDAASFFCSSWAARS*SRKLISWVIMVESC
Trigger: GCAACTCTCCACCATGATTACCCAGCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAGAAAAAGCTGGCAGCATCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 90 bp CCCATGTTGTTCATGGAGGACAGTTTCCCATCAACTCCGTGTGGCTaGTGTTGTTGCTCCCGCTGGATCTGTTCTCGCATCTTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: PMLFMEDSFPSTPCG*CCCSRWICSRIFRA
Trigger: GGCTCGGAAGATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCCTCCATGAACAACATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 90 bp TGTTCATCATGGGCTGCCAGGAGCTGCTCCCGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGTTGCCGTTCTTTCTCTGCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: CSSWAARSCSRKLIS*VIMVESCRSFSARL
Trigger: GAGCCTTGCAGAGAAAGAACGGCAACTCTCCACCATGATTACCCAGCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 90 bp CAGCCCCATGTTGTTCATGGAGGACAGTTTCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCGCTGGATCTGTTCTCGCATCTTCCG +
Preference number: 5 (lower is better)
Translates to: QPHVVHGGQFPINSV*LLLLLPLDLFSHLP
Trigger: CGGAAGATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCCTCCATGAACAACATGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACGAGCGCATCAGTTGCTaGTACTCCCCAATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDERISC*YSPIRS
Trigger: GCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTC...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPASRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: DQERQWRTHTSRPATYSDSVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACCCAATCCGGAGCTTCTaGCCATCCACGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDPIRSF*PSTMHV
Trigger: CACATGCATCGTGGATGGCAAGAAGCTCCGGATTGG...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS TCA 90 bp GGGAGATGTTGGGGACTTCACAGGCTCTGCTGTCTTAGGCCGGGATaGGAGATTCAGCGGCTGGGCTGTTGTTTCATCCTTAACTTGAGT +
Preference number: 5 (lower is better)
Translates to: GRCWGLHRLCCLRPG*EIQRLGCCFILNLS
Trigger: ACTCAAGTTAAGGATGAAACAACAGCCCAGCCGCTGAATCTCTCATCCCGGCCTAAGACAGCAGAGCCTGTGAAGTCCCCAACATCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS TCA 90 bp CTCGGGGCTGGCAGAGGTGCTAGAGCAGTCAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCATAGTAATAGCACCAGGATACACAAC +
Preference number: 5 (lower is better)
Translates to: LGAGRGARAVRCHLR*WCGRCHSNSTRIHN
Trigger: GTTGTGTATCCTGGTGCTATTACTATGGCAACGACCACACCATCACCTCAGATGACATCTGACTGCTCTAGCACCTCTGCCAGCCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 90 bp TTTCTCGATCTGCGATGCTGCCAGCTTTTTCTGTTCATCATGGGCTaGCAGGAGCTGCTCCCGCAAGCTGATCAGCTGGGTAATCATGGT +
Preference number: 5 (lower is better)
Translates to: FLDLRCCQLFLFIMG*QELLPQADQLGNHG
Trigger: ACCATGATTACCCAGCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAGAAAAAGCTGGCAGCATCGCAGATCGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCGATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVDLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATC...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPALVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFSVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GACCAAGAAAGACAATGGAGGACGCACACCAGCAGACCTGCAACGTATAGTGATTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: DQERQWRTHTSRPATYSDSRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...ATCACTATACGTTGCAGGTCTGCTGGTGTGCGTCCTCCATTGTCTTTCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACTTGTCCGAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RGLLNMFYMQPLTPWTCPNHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...CGGACAAGTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQDLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EAIKTILLMYCGATNACGEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTGCCCCTGCCGAGTTaGGTGGCTGTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: EAIKTILLMYCGATNACGLPLPS*VAVELM
Trigger: CATCAACTCCACAGCCACCAAACTCGGCAGGGGCAG...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCTTCTCAGTCCTGCAGTaGCTCAGCCCCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFFSVLQ*LSPMLF
Trigger: GAACAACATGGGGCTGAGCAACTGCAGGACTGAGAA...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTCTGCAGAGCCATTCATaGCTTTGCTTCCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPALQSHS*LCFLLR
Trigger: ACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCAG...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS GCA 90 bp TTCCATTTCATCCTCTCCATTAATCATGTCGTTCCCAGCCAGGCTTaGGCCGTCCATCTTCATACCATACGTGCTCTGGATGACAGGGAG +
Preference number: 5 (lower is better)
Translates to: FHFILSINHVVPSQA*AVHLHTIRALDDRE
Trigger: CTCCCTGTCATCCAGAGCACGTATGGTATGAAGATGGACGGCGCAAGCCTGGCTGGGAACGACATGATTAATGGAGAGGATGAAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQNHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCGTGGACAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: GIPRPFEHVLYAAAHAVDNHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...GTCCACGGCGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGGTTGCTGCTGTTGTCTaGCGATCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQVAAVV*RSVLAV
Trigger: AACAGCAAGAACAGATCGCAAGACAACAGCAGCAAC...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCTGCCCCTGCCGAGTTaGGTGGCTGTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: LLMYCGATNACGLFKNFVLPLPS*VAVELM
Trigger: CATCAACTCCACAGCCACCAAACTCGGCAGGGGCAG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCTGCCCCTGCCGAGTTaGGTGGCTGTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: CLTRYEAIKTILLMYCGALPLPS*VAVELM
Trigger: CATCAACTCCACAGCCACCAAACTCGGCAGGGGCAG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACATCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATSVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGGAGCGCATCAGTTGCTaGTACTCCCCAATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: KTILLMYCGATNACGLFKERISC*YSPIRS
Trigger: GCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTC...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS TCA 90 bp GTTGGCACTGACAGGCTCTGGGGCCTCATTCTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTAGTCGTCATAGGCTTCCATTTCATC +
Preference number: 5 (lower is better)
Translates to: VGTDRLWGLILAAIV*FGIIFVVVIGFHFI
Trigger: GATGAAATGGAAGCCTATGACGACTACGAAGATGATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCCCAGAGCCTGTCAGTGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 90 bp ACACCCGGGCCCAGTTTTCCATCTTCACTTGACTTTCCTGTTAATTaGGGACCCAGGTTCTCAAAGCGTGTTCTTTCCTTCTCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: TPGPSFPSSLDFPVN*GPRFSKRVLSFSVL
Trigger: CAGGACTGAGAAGGAAAGAACACGCTTTGAGAACCTGGGTCCCCAATTAACAGGAAAGTCAAGTGAAGATGGAAAACTGGGCCCGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGGTCACACCCACAGTGTTGCTATGGGAACCAATGCACAGTACCTTGGCAACAGTGCAGGAGATTAATCTaGTGCTGCTGCTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: GSHPQCCYGNQCTVPWQQCRRLI*CCCCRS
Trigger: ACTTCTACAGCAGCAGCACAAGATTAATCTCCTGCA...CTGTTGCCAAGGTACTGTGCATTGGTTCCCATAGCAACACTGTGGGTGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: TIYACTSITSEMFPGALGVWLLL*LPLDLF
Trigger: GAACAGATCCAGCGGGAGCAACAACAGCAGCCACAC...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATVWLLL*LPLDLF
Trigger: GAACAGATCCAGCGGGAGCAACAACAGCAGCCACAC...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLSVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVSVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTGGGTTCACGCACTGTGGCAGCCTTGCTCATTCCTTACAATATCTTGTCTCCTTCTCAGTCCTGCAGTaGCTCAGCCCCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: IGFTHCGSLAHSLQYLVSFSVLQ*LSPMLF
Trigger: GAACAACATGGGGCTGAGCAACTGCAGGACTGAGAA...GGAGACAAGATATTGTAAGGAATGAGCAAGGCTGCCACAGTGCGTGAACCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFSRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: TIYACTSITSEMFPGALGGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GTCTTGGCTGAGGGTAGACACTGCCTCACTGAAGCTAAATGTGATGGGCCAGCTAACCTGCTGGATCTGTaGCTGCAGGAGATTAATCTT +
Preference number: 5 (lower is better)
Translates to: VLAEGRHCLTEAKCDGPANLLDL*LQEINL
Trigger: AAGATTAATCTCCTGCAGCAACAGATCCAGCAGGTT...AGCTGGCCCATCACATTTAGCTTCAGTGAGGCAGTGTCTACCCTCAGCCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GTCATCCCACGCCACACACTGATGGCACATCAAGAGGCAAACACAATTGGGTTCCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: VIPRHTLMAHQEANTIGFPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...GAACCCAATTGTGTTTGCCTCTTGATGTGCCATCAGTGTGTGGCGTGGGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGTCTTGCGATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: KTILLMYCGATNACGLFKSCDLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATCGCAAGA...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGTCTTGCGATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: EAIKTILLMYCGATNACGSCDLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATCGCAAGA...CCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: KTILLMYCGATNACGLFKELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGCTGGGGATGCTGCTTTaGTTTGGCAGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIRLGMLL*FGRLTG
Trigger: CCCTGTCAACCTGCCAAACAAAAGCAGCATCCCCAG...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCTGGGGATGCTGCTTTaGTTTGGCAGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFLGMLL*FGRLTG
Trigger: CCCTGTCAACCTGCCAAACAAAAGCAGCATCCCCAG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLVWLLL*LPLDLF
Trigger: GAACAGATCCAGCGGGAGCAACAACAGCAGCCACAC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVVWLLL*LPLDLF
Trigger: GAACAGATCCAGCGGGAGCAACAACAGCAGCCACAC...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNSVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGGATGTGCCAGCTGGGACCAGGTAGCTCAATAAAGGTGACAGAATGCCGGGTCCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: WMCQLGPGSSIKVTECRVRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...GACCCGGCATTCTGTCACCTTTATTGAGCTACCTGGTCCCAGCTGGCACATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GGAACATTGCAAGAAGGTGATTTCAGAATGCCCTTGACTGGTGCTGTGGGGTTTTTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: GTLQEGDFRMPLTGAVGFFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...AAACCCCACAGCACCAGTCAAGGGCATTCTGAAATCACCTTCTTGCAATGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AAACAAATGGAATTCCGAGGCCTTTTGAACATGTTCTATATGCAGCCGCTCACGCCAATCCGGAGCTTCTaGCCATCCACGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: KQMEFRGLLNMFYMQPLTPIRSF*PSTMHV
Trigger: CACATGCATCGTGGATGGCAAGAAGCTCCGGATTGG...CGTGAGCGGCTGCATATAGAACATGTTCAAAAGGCCTCGGAATTCCATTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGAGCGCATCAGTTGCTaGTACTCCCCAATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLERISC*YSPIRS
Trigger: GCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGAGCGCATCAGTTGCTaGTACTCCCCAATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: YEAIKTILLMYCGATNACERISC*YSPIRS
Trigger: GCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLSRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVSRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCCTCTTCCTTTTCCCTaGAGGTCAAGTCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFPLPFP*RSSPGS
Trigger: TGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAGG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTCTTGCGATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TIYACTSITSEMFPGALGSCDLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATCGCAAGA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCTCTTGCGATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CLTRYEAIKTILLMYCGASCDLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATCGCAAGA...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: CLTRYEAIKTILLMYCGAELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: LLMYCGATNACGLFKNFVELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLMYCGATNACGLFKNFVLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TIYACTSITSEMFPGALGLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCTGGGGATGCTGCTTTaGTTTGGCAGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVLGMLL*FGRLTG
Trigger: CCCTGTCAACCTGCCAAACAAAAGCAGCATCCCCAG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGVWLLL*LPLDLF
Trigger: GAACAGATCCAGCGGGAGCAACAACAGCAGCCACAC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACATTCTCAGTCCTGCAGTaGCTCAGCCCCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATFSVLQ*LSPMLF
Trigger: GAACAACATGGGGCTGAGCAACTGCAGGACTGAGAA...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCTGCAGAGCCATTCATaGCTTTGCTTCCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: KTILLMYCGATNACGLFKLQSHS*LCFLLR
Trigger: ACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCAG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGGAAACTCAGTGTGTGCAACTCCTCAGCTTCCTATTTAGAAATAGGGGGAGTCCTGCAGAGCCATTCATaGCTTTGCTTCCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: WKLSVCNSSASYLEIGGVLQSHS*LCFLLR
Trigger: ACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCAG...GACTCCCCCTATTTCTAAATAGGAAGCTGAGGAGTTGCACACACTGAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGTTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: KTILLMYCGATNACGLFKFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCCAATCCGGAGCTTCTaGCCATCCACGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLPIRSF*PSTMHV
Trigger: CACATGCATCGTGGATGGCAAGAAGCTCCGGATTGG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGAGCGCATCAGTTGCTaGTACTCCCCAATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGERISC*YSPIRS
Trigger: GCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGAGCGCATCAGTTGCTaGTACTCCCCAATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMERISC*YSPIRS
Trigger: GCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCCTCTTCCTTTTCCCTaGAGGTCAAGTCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVPLPFP*RSSPGS
Trigger: TGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAGG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCCTCTTCCTTTTCCCTaGAGGTCAAGTCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLPLPFP*RSSPGS
Trigger: TGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAGG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: YEAIKTILLMYCGATNACAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAGATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATDLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATC...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFDLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEAEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: YEAIKTILLMYCGATNACLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCTGCCCCTGCCGAGTTaGGTGGCTGTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSLPLPS*VAVELM
Trigger: CATCAACTCCACAGCCACCAAACTCGGCAGGGGCAG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCTGGGGATGCTGCTTTaGTTTGGCAGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNLGMLL*FGRLTG
Trigger: CCCTGTCAACCTGCCAAACAAAAGCAGCATCCCCAG...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEASVWLL*LLPLDL
Trigger: CAGATCCAGCGGGAGCAACAACAGCAGCCACACGGA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGTTCTCAGTCCTGCAGTaGCTCAGCCCCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLFSVLQ*LSPMLF
Trigger: GAACAACATGGGGCTGAGCAACTGCAGGACTGAGAA...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATEPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AGAAACAACATGATTGGCAAGAGGAATACCTGCTCACAAAGAAGCCACATCAGGGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RNNMIGKRNTCSQRSHIREPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...CCTGATGTGGCTTCTTTGTGAGCAGGTATTCCTCTTGCCAATCATGTTGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCTGCAGAGCCATTCATaGCTTTGCTTCCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFLQSHS*LCFLLR
Trigger: ACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCAG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACATTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTCCAATCCGGAGCTTCTaGCCATCCACGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFPIRSF*PSTMHV
Trigger: CACATGCATCGTGGATGGCAAGAAGCTCCGGATTGG...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCCAATCCGGAGCTTCTaGCCATCCACGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNPIRSF*PSTMHV
Trigger: CACATGCATCGTGGATGGCAAGAAGCTCCGGATTGG...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGSRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQSRAHQ*LVLPNP
Trigger: CGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGA...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: LLMYCGATNACGLFKNFVVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCAGGAGGAATCCTCTaGTTCTGTCCGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNAGGIL*FCPSHL
Trigger: GAGATGACTCGGACAGAACAAGAGGATTCCTCCTGC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATNHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTCTTGCGATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMSCDLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATCGCAAGA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTGTTGCTGCTGTTGTCTaGCGATCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFVAAVV*RSVLAV
Trigger: AACAGCAAGAACAGATCGCAAGACAACAGCAGCAAC...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTGCTGCTGTTGTCTaGCGATCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LLMYCGATNACGLFKNFVVAAVV*RSVLAV
Trigger: AACAGCAAGAACAGATCGCAAGACAACAGCAGCAAC...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACTGCCCCTGCCGAGTTaGGTGGCTGTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQLPLPS*VAVELM
Trigger: CATCAACTCCACAGCCACCAAACTCGGCAGGGGCAG...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACACTGCCCCTGCCGAGTTaGGTGGCTGTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTLPLPS*VAVELM
Trigger: CATCAACTCCACAGCCACCAAACTCGGCAGGGGCAG...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCCCCTGCCGAGTTaGGTGGCTGTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTILPLPS*VAVELM
Trigger: CATCAACTCCACAGCCACCAAACTCGGCAGGGGCAG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCTGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: CLTRYEAIKTILLMYCGACFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACA...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGTGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: TIYACTSITSEMFPGALGCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACA...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACTGGGGATGCTGCTTTaGTTTGGCAGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQLGMLL*FGRLTG
Trigger: CCCTGTCAACCTGCCAAACAAAAGCAGCATCCCCAG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATTCTCAGTCCTGCAGTaGCTCAGCCCCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGFSVLQ*LSPMLF
Trigger: GAACAACATGGGGCTGAGCAACTGCAGGACTGAGAA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLEPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTCTGCAGAGCCATTCATaGCTTTGCTTCCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVLQSHS*LCFLLR
Trigger: ACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCAG...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGTTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEAGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAACCTCTTCCTTTTCCCTaGAGGTCAAGTCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQPLPFP*RSSPGS
Trigger: TGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAGG...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTATGGGAGGCCGGGTGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIMGGRV*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACACCCGGCCTCCCAT...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGCTCTCAGGTGTACCTTaGATTTCTCCAAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: KTILLMYCGATNACGLFKLSGVP*ISPRSS
Trigger: TGAACTTCTTGGAGAAATCAAAGGTACACCTGAGAG...CTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGTTGCTGCTGTTGTCTaGCGATCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: YEAIKTILLMYCGATNACVAAVV*RSVLAV
Trigger: AACAGCAAGAACAGATCGCAAGACAACAGCAGCAAC...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: YEAIKTILLMYCGATNACCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCTGGGGATGCTGCTTTaGTTTGGCAGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSLGMLL*FGRLTG
Trigger: CCCTGTCAACCTGCCAAACAAAAGCAGCATCCCCAG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIVWLLL*LPLDLF
Trigger: GAACAGATCCAGCGGGAGCAACAACAGCAGCCACAC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGEPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNEPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCCCAATCCGGAGCTTCTaGCCATCCACGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSPIRSF*PSTMHV
Trigger: CACATGCATCGTGGATGGCAAGAAGCTCCGGATTGG...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACCAATCCGGAGCTTCTaGCCATCCACGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEAPIRSF*PSTMHV
Trigger: CACATGCATCGTGGATGGCAAGAAGCTCCGGATTGG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGAGCGCATCAGTTGCTaGTACTCCCCAATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIERISC*YSPIRS
Trigger: GCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACAGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGGGCATCTGAGGCTGTaGCCCCACAGTGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIGHLRL*PHSEEL
Trigger: CAGTTCTTCACTGTGGGGCAACAGCCTCAGATGCCC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTCTGGGGAACCTGCTGGATCTGTaGCTGCAGGAGATTAATCTT +
Preference number: 5 (lower is better)
Translates to: TIYACTSITSEMFPGALGNLLDL*LQEINL
Trigger: AAGATTAATCTCCTGCAGCAACAGATCCAGCAGGTT...CCCCAGAGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAACCTGCTGGATCTGTaGCTGCAGGAGATTAATCTT +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFNLLDL*LQEINL
Trigger: AAGATTAATCTCCTGCAGCAACAGATCCAGCAGGTT...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: QENVICLTRYEAIKTILLPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...CAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACTCTCAGGTGTACCTTaGATTTCTCCAAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATLSGVP*ISPRSS
Trigger: TGAACTTCTTGGAGAAATCAAAGGTACACCTGAGAG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCTCTCAGGTGTACCTTaGATTTCTCCAAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: CLTRYEAIKTILLMYCGALSGVP*ISPRSS
Trigger: TGAACTTCTTGGAGAAATCAAAGGTACACCTGAGAG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCTCTCAGGTGTACCTTaGATTTCTCCAAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: LLMYCGATNACGLFKNFVLSGVP*ISPRSS
Trigger: TGAACTTCTTGGAGAAATCAAAGGTACACCTGAGAG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMNHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNNHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAACAACAATATATGCATGTACTAGCATCACTTCAGAAATGTTTCCAGGGGCTTCTTGCGATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: KTTIYACTSITSEMFPGASCDLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATCGCAAGA...AGCCCCTGGAAACATTTCTGAAGTGATGCTAGTACATGCATATATTGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGTTGCTGCTGTTGTCTaGCGATCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNVAAVV*RSVLAV
Trigger: AACAGCAAGAACAGATCGCAAGACAACAGCAGCAAC...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCTGCAGGAGATTAATCTaGTGCTGCTGCTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: YEAIKTILLMYCGATNACCRRLI*CCCCRS
Trigger: ACTTCTACAGCAGCAGCACAAGATTAATCTCCTGCA...GCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTGTTTGCAGGAGATTAATCTaGTGCTGCTGCTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: LMYCGATNACGLFKNFVVCRRLI*CCCCRS
Trigger: ACTTCTACAGCAGCAGCACAAGATTAATCTCCTGCA...AACAACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGATGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACA...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACTGGGGATGCTGCTTTaGTTTGGCAGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQLGMLL*FGRLTG
Trigger: CCCTGTCAACCTGCCAAACAAAAGCAGCATCCCCAG...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTTCTCAGTCCTGCAGTaGCTCAGCCCCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSFSVLQ*LSPMLF
Trigger: GAACAACATGGGGCTGAGCAACTGCAGGACTGAGAA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCATTCTCAGTCCTGCAGTaGCTCAGCCCCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEAFSVLQ*LSPMLF
Trigger: GAACAACATGGGGCTGAGCAACTGCAGGACTGAGAA...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AGCTGTGATGGTAACCCTTCAGGTCATTTAAAAACTTTACACTGGACTGTACAAGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SCDGNPSGHLKTLHWTVQEPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...TTGTACAGTCCAGTGTAAAGTTTTTAAATGACCTGAAGGGTTACCATCACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGCTGCAGAGCCATTCATaGCTTTGCTTCCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQLQSHS*LCFLLR
Trigger: ACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCAG...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CATGAGATTGCTATGTACATCTTTTGTATCCAGCAGGAAAAAGAGGTTAAAGGGCTGCAGAGCCATTCATaGCTTTGCTTCCTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: HEIAMYIFCIQQEKEVKGLQSHS*LCFLLR
Trigger: ACGCAGAAGGAAGCAAAGCAATGAATGGCTCTGCAG...CCCTTTAACCTCTTTTTCCTGCTGGATACAAAAGATGTACATAGCAATCTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp AAAGTGACCCCTCCTCATATGAAATCAATGTACAAGAACAAAATTCCAATCCCCTTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: KVTPPHMKSMYKNKIPIPFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...GGGGATTGGAATTTTGTTCTTGTACATTGATTTCATATGAGGAGGGGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACACCTCTTCCTTTTCCCTaGAGGTCAAGTCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTPLPFP*RSSPGS
Trigger: TGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAGG...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp ATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGACCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: ICLTRYEAIKTILLMYCGPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...TCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AGAAAATCTGCACTTAAAATTTACTGGAGGGTGTGCCGAATGTCCCTAGAGTTTCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: RKSALKIYWRVCRMSLEFPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...AAACTCTAGGGACATTCGGCACACCCTCCAGTAAATTTTAAGTGCAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEADLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGGTTGCTGCTGTTGTCTaGCGATCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQVAAVV*RSVLAV
Trigger: AACAGCAAGAACAGATCGCAAGACAACAGCAGCAAC...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp GAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTGCAGGAGATTAATCTaGTGCTGCTGCTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: ENVICLTRYEAIKTILLMCRRLI*CCCCRS
Trigger: ACTTCTACAGCAGCAGCACAAGATTAATCTCCTGCA...CATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATTGCAGGAGATTAATCTaGTGCTGCTGCTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: TRYEAIKTILLMYCGATNCRRLI*CCCCRS
Trigger: ACTTCTACAGCAGCAGCACAAGATTAATCTCCTGCA...ATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACAAACAAACAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACATTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TNKQKQKQTYQWEQKPKTLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...TGTCTTTGGCTTCTGCTCCCATTGGTATGTTTGTTTTTGTTTTTGTTTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTAAGAACTTTGTTCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: LLMYCGATNACGLFKNFVRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...AACAAAGTTCTTAAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp TGTCTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: CLTRYEAIKTILLMYCGARDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...GGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCACACGTTACGAAGCAATTAAGACCATTCTGCTGATGTATTGTGGAGCCACACGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: LTRYEAIKTILLMYCGATRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...TGTGGCTCCACAATACATCAGCAGAATGGTCTTAATTGCTTCGTAACGTGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ATTAAGACCATTCTGCTGATGTATTGTGGAGCCACAAATGCATGCGGGCTCTTTCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: IKTILLMYCGATNACGLFRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...AAAGAGCCCGCATGCATTTGTGGCTCCACAATACATCAGCAGAATGGTCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSNHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIDLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAGTTGCTGCTGTTGTCTaGCGATCTGTTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEAVAAVV*RSVLAV
Trigger: AACAGCAAGAACAGATCGCAAGACAACAGCAGCAAC...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIEPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGAGCCATTCATTGCTTaGCTTCCTTCTGCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQEPFIA*LPSASS
Trigger: AGAGGACGCAGAAGGAAGCAAAGCAATGAATGGCTC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTTTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATTCTCTAGGTGGATTTaGCTTAGCCGGGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQFSRWI*LSRACS
Trigger: AGAACAGGCCCGGCTAAGCAAAATCCACCTAGAGAA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAACAACAGAACCTGCTGGATCTGTaGCTGCAGGAGATTAATCTT +
Preference number: 5 (lower is better)
Translates to: PSPGVSYLIRLHLNKQQQNLLDL*LQEINL
Trigger: AAGATTAATCTCCTGCAGCAACAGATCCAGCAGGTT...CTGTTGTTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEAPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAAGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTINHGGE*PFFLCK
Trigger: CTTGCAGAGAAAGAACGGCAACTCTCCACCATGATT...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp ACTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCTGCAGGAGATTAATCTaGTGCTGCTGCTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: TQVYEKSGKRNLSHTLRSCRRLI*CCCCRS
Trigger: ACTTCTACAGCAGCAGCACAAGATTAATCTCCTGCA...GCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAGTTTCCAAGTCCCGGTGTCTCATATTTAATACGTCTTCACCTAAATAAACAATGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: KFPSPGVSYLIRLHLNKQCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACA...TTGTTTATTTAGGTGAAGACGTATTAAATATGAGACACCGGGACTTGGAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAACTTTGCTTAAGCCCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCACGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: KLCLSPTDVSDLCDCHSPRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...TGGAGAATGACAATCACAGAGATCACTTACATCAGTGGGGCTTAAGCAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166877.8
ENSMUST00000206034.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAAACCTGCTGGATCTGTaGCTGCAGGAGATTAATCTT +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEANLLDL*LQEINL
Trigger: AAGATTAATCTCCTGCAGCAACAGATCCAGCAGGTT...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp CTCAAGTTTATGAAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCACTCTCAGGTGTACCTTaGATTTCTCCAAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: LKFMKNQENVICLTRYEALSGVP*ISPRSS
Trigger: TGAACTTCTTGGAGAAATCAAAGGTACACCTGAGAG...TGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTTCATAAACTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS-3UTR CAA 90 bp AAAAATCAGGAAAACGTAATCTGTCTCACACGTTACGAAGCAATTAAGACCATTCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: KNQENVICLTRYEAIKTIRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...AATGGTCTTAATTGCTTCGTAACGTGTGAGACAGATTACGTTTTCCTGATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp GGCAGCAGCAGCTGCTGCCAAGGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAGCGGAGGCATGTGCCC +
Preference number: 6 (lower is better)
Translates to: GSSSCCQGPLVM*KNWDHERRHVP
Trigger: GGGCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000205479.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp CTGCGATGCTGCCAGCTTTTTCTGTTCATCATGGGCTaGCAGGAGCTGCTCCCGCAAGCTGATCAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LRCCQLFLFIMG*QELLPQADQLG
Trigger: ACCCAGCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCATGATGAACAGAAAAAGCTGGCAGCATCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp GGCTGTTGCCCCACAGTGAAGAACTGTCGCATCTCCTaGCTTCGCGAGCGCATCAGTTGCTTGTACTCCCCA +
Preference number: 6 (lower is better)
Translates to: GCCPTVKNCRIS*LRERISCLYSP
Trigger: TGGGGAGTACAAGCAACTGATGCGCTCGCGAAGGCAGGAGATGCGACAGTTCTTCACTGTGGGGCAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp CAGGGCTGGTTTTGCTGGCTGGGAAGAGGTTCTGGGTaGGAGATGTTGGGGACTTCACAGGCTCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: QGWFCWLGRGSG*EMLGTSQALLS
Trigger: AGACAGCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp CGCGGGCATCCCTGTAGACACGGGCTTCAGCCACAGTaGCGCCTCCTGTTGGCCAACAATAATACTGCTGTA +
Preference number: 6 (lower is better)
Translates to: RGHPCRHGLQPQ*RLLLANNNTAV
Trigger: TACAGCAGTATTATTGTTGGCCAACAGGAGGCGCCACTGTGGCTGAAGCCCGTGTCTACAGGGATGCCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp GGGGAAGAGGAATCCCTGTTGGGCAGCAGCAGCTGCTaGCAAGGTCCGCTGGTCATGTGGAAAAATTGGGAT +
Preference number: 6 (lower is better)
Translates to: GEEESLLGSSSC*QGPLVMWKNWD
Trigger: ATCCCAATTTTTCCACATGACCAGCGGACCTTGGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000205479.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp GACAGTTTCCCATCAACTCCGTGTGGCTGCTGTTGTTaGTCCCGCTGGATCTGTTCTCGCATCTTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: DSFPSTPCGCCC*SRWICSRIFRA
Trigger: GGCTCGGAAGATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp AACTGTCGCATCTCCTGCCTTCGCGAGCGCATCAGTTaGTTGTACTCCCCAATCCGGAGCTTCTTGCCATCC +
Preference number: 6 (lower is better)
Translates to: NCRISCLRERIS*LYSPIRSFLPS
Trigger: GGATGGCAAGAAGCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGAAGGCAGGAGATGCGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp TGGGCTGCCAGGAGCTGCTCCCGCAAGCTGATCAGCTaGGTAATCATGGTGGAGAGTTGCCGTTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: WAARSCSRKLIS*VIMVESCRSFS
Trigger: AGAGAAAGAACGGCAACTCTCCACCATGATTACCCAGCTGATCAGCTTGCGGGAGCAGCTCCTGGCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp TTGACAGGGCTGGTTTTGCTGGCTGGGAAGAGGTTCTaGGTGGGAGATGTTGGGGACTTCACAGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LTGLVLLAGKRF*VGDVGDFTGSA
Trigger: AGCAGAGCCTGTGAAGTCCCCAACATCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 72 bp GGACAGTTTCCCATCAACTCCGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTCTCGCATCTTCCGAGC +
Preference number: 6 (lower is better)
Translates to: GQFPINSVWLLL*LPLDLFSHLPS
Trigger: GCTCGGAAGATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 72 bp GGAGGACAGTTTCCCATCAACTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTGTTCTCGCATCTTCCG +
Preference number: 6 (lower is better)
Translates to: GGQFPINSVWLL*LLPLDLFSHLP
Trigger: CGGAAGATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 72 bp GAACTGTCGCATCTCCTGCCTTCGCGAGCGCATCAGTaGCTTGTACTCCCCAATCCGGAGCTTCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: ELSHLLPSRAHQ*LVLPNPELLAI
Trigger: GATGGCAAGAAGCTCCGGATTGGGGAGTACAAGCAACTGATGCGCTCGCGAAGGCAGGAGATGCGACAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 90 bp GTTGTTCATGGAGGACAGTTTCCCATCAACTCCGTGTGGCTGCTGTaGTTGCTCCCGCTGGATCTGTTCTCGCATCTTCCGAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: VVHGGQFPINSVWLL*LLPLDLFSHLPSLL
Trigger: CAGGAGGCTCGGAAGATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCCTCCATGAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS TCA 72 bp TGGGGACTTCACAGGCTCTGCTGTCTTAGGCCGGGATaGGAGATTCAGCGGCTGGGCTGTTGTTTCATCCTT +
Preference number: 6 (lower is better)
Translates to: WGLHRLCCLRPG*EIQRLGCCFIL
Trigger: AAGGATGAAACAACAGCCCAGCCGCTGAATCTCTCATCCCGGCCTAAGACAGCAGAGCCTGTGAAGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS TCA 72 bp TCCCGCTGGATCTGTTCTCGCATCTTCCGAGCCTCCTaGATGGCTTTCATCACTGTGTCCTGGTCCCCAAAC +
Preference number: 6 (lower is better)
Translates to: SRWICSRIFRAS*MAFITVSWSPN
Trigger: GTTTGGGGACCAGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGATGCGAGAACAGATCCAGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp TTGATGGCATCTTTGCTCCAGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGAGCTGCTCAATCTGTC +
Preference number: 6 (lower is better)
Translates to: LMASLLQVTPAC*PAERHRAAQSV
Trigger: GACAGATTGAGCAGCTCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTGGAGCAAAGATGCCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000166207.3
ENSMUST00000205405.2
ENSMUST00000206369.2
CDS CCA 72 bp GCTGGATCTGTTCTCGCATCTTCCGAGCCTCCTGAATaGCTTTCATCACTGTGTCCTGGTCCCCAAACAGGG +
Preference number: 6 (lower is better)
Translates to: AGSVLASSEPPE*LSSLCPGPQTG
Trigger: CCCTGTTTGGGGACCAGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGAAGATGCGAGAACAGATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp TTGATGGCATCTTTGCTCCAGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGAGCTGCTGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: LMASLLQVTPAC*PAERHRAAEAV
Trigger: TACAGCTTCAGCAGCTCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTGGAGCAAAGATGCCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166877.8
ENSMUST00000169129.8
CDS CAA 72 bp TGCTTCAGCGTATCCACCACATCGGCAAGGCTCCCTTaGCGGCGTTCCGGGGTTCCAAAAGTAACACTGTTC +
Preference number: 6 (lower is better)
Translates to: CFSVSTTSARLP*RRSGVPKVTLF
Trigger: GAACAGTGTTACTTTTGGAACCCCGGAACGCCGCAAAGGGAGCCTTGCCGATGTGGTGGATACGCTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 90 bp GTTCATGGAGGACAGTTTCCCATCAACTCCGTGTGGCTGCTGTTGTaGCTCCCGCTGGATCTGTTCTCGCATCTTCCGAGCCTCCTGAAT +
Preference number: 6 (lower is better)
Translates to: VHGGQFPINSVWLLL*LPLDLFSHLPSLLN
Trigger: ATTCAGGAGGCTCGGAAGATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCCTCCATGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS TCA 72 bp CCAAGGTCCGCTGGTCATGTGGAAAAATTGGGATCATaGGCGGAGGCATGTGCCCCTGAACCTGGATCTGTT +
Preference number: 6 (lower is better)
Translates to: PRSAGHVEKLGS*AEACAPEPGSV
Trigger: AACAGATCCAGGTTCAGGGGCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000205479.2
CDS GCA 72 bp TCTTGTTCTGTCCGAGTCATCTCCTCCAGCTTCTTCTaGTTCAGCGTATCCACCACATCGGCAAGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: SCSVRVISSSFF*FSVSTTSARLP
Trigger: AGGGAGCCTTGCCGATGTGGTGGATACGCTGAAGCAGAAGAAGCTGGAGGAGATGACTCGGACAGAACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp TTCATGGAGGACAGTTTCCCATCAACTCCGTGTGGCTaGTGTTGTTGCTCCCGCTGGATCTGTTCTCGCATC +
Preference number: 6 (lower is better)
Translates to: FMEDSFPSTPCG*CCCSRWICSRI
Trigger: GATGCGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCCTCCATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp GTTGTTCATGGAGGACAGTTTCCCATCAACTCCGTGTaGCTGCTGTTGTTGCTCCCGCTGGATCTGTTCTCG +
Preference number: 6 (lower is better)
Translates to: VVHGGQFPINSV*LLLLLPLDLFS
Trigger: CGAGAACAGATCCAGCGGGAGCAACAACAGCAGCCACACGGAGTTGATGGGAAACTGTCCTCCATGAACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CCA 72 bp TTGATGGCATCTTTGCTCCAGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGAGCTGAAGCTGTAAAG +
Preference number: 6 (lower is better)
Translates to: LMASLLQVTPAC*PAERHRAEAVK
Trigger: CTTTACAGCTTCAGCTCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTGGAGCAAAGATGCCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106612.8
ENSMUST00000206034.2
CDS CAA 90 bp GATCACTGCCCTCTTCCTTTTCCCTTGAGGTCAAGTCCTGGGTCATaGCTTCCTCTCCATCCGCTGTACAGGCAAATGGAGAGGTGGCTT +
Preference number: 6 (lower is better)
Translates to: DHCPLPFPLRSSPGS*LPLHPLYRQMERWL
Trigger: AAGCCACCTCTCCATTTGCCTGTACAGCGGATGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAGGGCAGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206123.2
ENSMUST00000206369.2
CDS TCA 72 bp GGCAGAGGTGCTAGAGCAGTCAGATGTCATCTGAGGTaGTGGTGTGGTCGTTGCCATAGTAATAGCACCAGG +
Preference number: 6 (lower is better)
Translates to: GRGARAVRCHLR*WCGRCHSNSTR
Trigger: CCTGGTGCTATTACTATGGCAACGACCACACCATCACCTCAGATGACATCTGACTGCTCTAGCACCTCTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 72 bp CCTCTTCCTTTTCCCTTGAGGTCAAGTCCTGGGTCATaGCTTCCTCTCCATCCGCTGTACAGGCAAATGGAG +
Preference number: 6 (lower is better)
Translates to: PLPFPLRSSPGS*LPLHPLYRQME
Trigger: CTCCATTTGCCTGTACAGCGGATGGAGAGGAAGCAATGACCCAGGACTTGACCTCAAGGGAAAAGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206123.2
ENSMUST00000206369.2
CDS CAA 72 bp ATGCTGCTTTTGTTTGGCAGGTTGACAGGGCTGGTTTaGCTGGCTGGGAAGAGGTTCTGGGTGGGAGATGTT +
Preference number: 6 (lower is better)
Translates to: MLLLFGRLTGLV*LAGKRFWVGDV
Trigger: AACATCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAACCTGCCAAACAAAAGCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 90 bp GAGCTGCTCCCGCAAGCTGATCAGCTGGGTAATCATGGTGGAGAGTaGCCGTTCTTTCTCTGCAAGGCTCTCAGGTGTACCTTTGATTTC +
Preference number: 6 (lower is better)
Translates to: ELLPQADQLGNHGGE*PFFLCKALRCTFDF
Trigger: GAAATCAAAGGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAACTCTCCACCATGATTACCCAGCTGATCAGCTTGCGGGAGCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS TCA 72 bp TCACTGTGTCCTGGTCCCCAAACAGGGCAGGAGAGTTaGGACTGGATAGTATATCTAGAGAGGATCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SLCPGPQTGQES*DWIVYLERILS
Trigger: GGAGAGGATCCTCTCTAGATATACTATCCAGTCTCAACTCTCCTGCCCTGTTTGGGGACCAGGACACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS TCA 72 bp GACAGGCTCTGGGGCCTCATTCTCGCTGCTATAGTCTaGTTTGGGATCATCTTCGTAGTCGTCATAGGCTTC +
Preference number: 6 (lower is better)
Translates to: DRLWGLILAAIV*FGIIFVVVIGF
Trigger: GAAGCCTATGACGACTACGAAGATGATCCCAAATCAGACTATAGCAGCGAGAATGAGGCCCCAGAGCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp ATCCTCTCCATTAATCATGTCGTTCCCAGCCAGGCTTaGGCCGTCCATCTTCATACCATACGTGCTCTGGAT +
Preference number: 6 (lower is better)
Translates to: ILSINHVVPSQA*AVHLHTIRALD
Trigger: ATCCAGAGCACGTATGGTATGAAGATGGACGGCGCAAGCCTGGCTGGGAACGACATGATTAATGGAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 90 bp AGCTTCTTCTGCTTCAGCGTATCCACCACATCGGCAAGGCTCCCTTaGCGGCGTTCCGGGGTTCCAAAAGTAACACTGTTCATTATTTCA +
Preference number: 6 (lower is better)
Translates to: SFFCFSVSTTSARLP*RRSGVPKVTLFIIS
Trigger: TGAAATAATGAACAGTGTTACTTTTGGAACCCCGGAACGCCGCAAAGGGAGCCTTGCCGATGTGGTGGATACGCTGAAGCAGAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS GCA 72 bp CTGGGTAATCATGGTGGAGAGTTGCCGTTCTTTCTCTaGAAGGCTCTCAGGTGTACCTTTGATTTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: LGNHGGELPFFL*KALRCTFDFSK
Trigger: CTTGGAGAAATCAAAGGTACACCTGAGAGCCTTGCAGAGAAAGAACGGCAACTCTCCACCATGATTACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2
CDS CAA 72 bp GAGATTCAGCGGCTGGGCTGTTGTTTCATCCTTAACTaGAGTTACAGGGCTGGTCCCTCTCTTTTCATTTTT +
Preference number: 6 (lower is better)
Translates to: EIQRLGCCFILN*SYRAGPSLFIF
Trigger: AAAAATGAAAAGAGAGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAACAACAGCCCAGCCGCTGAATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072804.11
ENSMUST00000106612.8
ENSMUST00000166207.3
ENSMUST00000166877.8
ENSMUST00000169129.8
ENSMUST00000205405.2
ENSMUST00000206034.2
ENSMUST00000206369.2