Pregenerated sensors for SOX30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040489Ensembl transcript IDs: ENSMUST00000049038.4
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAATAAAATAATGTACCCTGAGATATCACACTTGCTGTGCAGATaGTATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: KNKIMYPEISHLLCR*YTHMCPHMPQELSE Trigger: TTCAGAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGTGATATCTCAGGGTACATTATTTTATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| 3UTR TCA 90 bp | TATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCTGAATTTTaGATTTTCCAAGATAACGTAATGCTATCACATGTTGGTGCAAAT | + |
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Preference number: 1 (lower is better) Translates to: YTHMCPHMPQELSEF*IFQDNVMLSHVGAN Trigger: ATTTGCACCAACATGTGATAGCATTACGTTATCTTGGAAAATTCAAAATTCAGAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| 3UTR CAA 90 bp | TGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTaGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: CYHMLVQISAMKVTT*DFKIPTLRHRESRV Trigger: GACCCTGGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGTCACTAAGAGAACTTaGGAAGACATGAACGGCACT | + |
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Preference number: 2 (lower is better) Translates to: LAVQMIYSHVSSYATGAFVTKRT*EDMNGT Trigger: AGTGCCGTTCATGTCTTCCCAAGTTCTCTTAGTGAC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| 3UTR TCA 72 bp | GGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATaGACGGCACTTGGTCCTGACTCCTCAGATCATGGC | + |
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Preference number: 3 (lower is better) Translates to: GSPGSLRELGKT*TALGPDSSDHG Trigger: GCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| 3UTR TCA 72 bp | ATAATGTACCCTGAGATATCACACTTGCTGTGCAGATaGTATACTCACATGTGTCCTCATATGCCACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: IMYPEISHLLCR*YTHMCPHMPQE Trigger: CTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGTGATATCTCAGGGTACATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| 3UTR GCA 72 bp | TGCTGTGCAGATGATATACTCACATGTGTCCTCATATaGCACAGGAGCTTTCTGAATTTTGAATTTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: CCADDILTCVLI*HRSFLNFEFSK Trigger: CTTGGAAAATTCAAAATTCAGAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGGCGCTGAGGTGGGAGTaGTGGGCGGGGCGTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMALRWE*WAGRQA Trigger: AGCCTGACGCCCCGCCCATCACTCCCACCTCAGCGC...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAAATGGCGGCCGTGGCCTaGGCCGACGGCGACTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HERHLVLTPQIMAENTQQMAAVA*ADGDWE Trigger: CTCCCAGTCGCCGTCGGCTCAGGCCACGGCCGCCAT...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGGGCCCAGAAAAGCGCTaGGGTGGGAGTGATGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMGPEKR*GGSDGR Trigger: CCGCCCATCACTCCCACCTCAGCGCTTTTCTGGGCC...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAACGGGGCTGCATGGGGTaGAGCTCCGGCCTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: HERHLVLTPQIMAENTQQRGCMG*SSGLQG Trigger: CCCCTGCAGGCCGGAGCTGCACCCCATGCAGCCCCG...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGATGGGACTTGGGCGCTaGACTGCAGGTGTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMMGLGR*TAGVGS Trigger: GCTGCCCACACCTGCAGTCCAGCGCCCAAGTCCCAT...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGCCAGGATGGCCTCCTTaGTGCTGTGGACCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMPGWPP*CCGPGH Trigger: ATGGCCTGGTCCACAGCAGCAAGGAGGCCATCCTGG...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGACTTGGGCGCTGGACTaGAGGTGTGGGCAGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMTWALD*RCGQLD Trigger: ATCCAGCTGCCCACACCTGCAGTCCAGCGCCCAAGT...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAACGGCCACTGGGCCAGTaGTGGAGACGCTGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HERHLVLTPQIMAENTQQRPLGQ*WRRWAG Trigger: TCCAGCCCAGCGTCTCCAGCACTGGCCCAGTGGCCG...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGCGTCCGGGGCTGCATaGGGTGCAGCTCCGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFASGAA*GAAPAC Trigger: GCAGGCCGGAGCTGCACCCCATGCAGCCCCGGACGC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGCGTGTGAGTGTGGAATaGGAGTCGCCGGGGGTATCG | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMRVSVE*ESPGVS Trigger: CGATACCCCCGGCGACTCCCATTCCACACTCACACG...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCAGCTCCGGCCTCAGCTaGAGCAGGCGCGCCTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: MKVTTLDFKIPTLRHRESSSGLS*SRRACA Trigger: CGCGCAGGCGCGCCTGCTGCAGCTGAGGCCGGAGCT...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGCACCAGCTGGAATCCTaGTGGTGCTCTCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMHQLES*WCSPES Trigger: GCTCTCTGGAGAGCACCACCAGGATTCCAGCTGGTG...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGCCCGAAGGGAGCCTATaGATGTCAGTTTGGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMPEGSL*MSVWEG Trigger: GCCTTCCCAAACTGACATTCATAGGCTCCCTTCGGG...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCCGTCGGCCGCGGACTaGGGAGGCAACAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRPSAAD*GGNSSS Trigger: GCTGCTGCTGTTGCCTCCGCAGTCCGCGGCCGACGG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAATGGCCAGCAGGCTCTTaGCTTCCCCGCCTTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HERHLVLTPQIMAENTQQWPAGS*LPRLSA Trigger: CGCTGAAAGGCGGGGAAGGCAAGAGCCTGCTGGCCA...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAATGGACGTGGCCTCCGTaGCCAGCCTACAATCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HERHLVLTPQIMAENTQQWTWPP*PAYNRP Trigger: GGGACGATTGTAGGCTGGGCACGGAGGCCACGTCCA...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGGGGAACCTTAGGTCTTaGTGGTGTGGCCCAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMGNLRS*WCGPKA Trigger: TGCTTTTGGGCCACACCAGCAAGACCTAAGGTTCCC...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGCGGCTGGGCCAGGATaGCCTCCTTGCTGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFAAGPG*PPCCCG Trigger: TCCACAGCAGCAAGGAGGCCATCCTGGCCCAGCCGC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAACCACTGGGCCAGTGCTaGAGACGCTGGGCTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HERHLVLTPQIMAENTQQPLGQC*RRWAGK Trigger: TTTTCCAGCCCAGCGTCTCCAGCACTGGCCCAGTGG...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGGCGAGGTTGCAAATCTaGCATGGGCAGTACTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMARLQI*HGQYLH Trigger: GTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGC...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCGACACCAGAGGGGGCTaGGGCTGGGGCTGTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: MKVTTLDFKIPTLRHRESDTRGG*GWGCED Trigger: GTCTTCACAGCCCCAGCCTCAGCCCCCTCTGGTGTC...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGCTGGACACTGATTTCTaGATTGTTGGCGGCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMLDTDF*IVGGWV Trigger: AACCCAGCCGCCAACAATGCAGAAATCAGTGTCCAG...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCCACCGTGGCCATGGCTaGTGTAGTAAGGGGGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFHRGHG*CSKGAR Trigger: ACGGGCCCCCTTACTACAGCAGCCATGGCCACGGTG...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGCCTACAATCGTCCCTaGGTCTGTCTGGCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFAYNRP*VCLAPP Trigger: CGGAGGAGCCAGACAGACCCAGGGACGATTGTAGGC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCTGTGGACCAGGCCATTaGACGTGGCCTCCGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: MKVTTLDFKIPTLRHRESCGPGH*TWPPCP Trigger: TGGGCACGGAGGCCACGTCCAATGGCCTGGTCCACA...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCGCTGGACTGCAGGTGTaGGCAGCTGGATGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: MKVTTLDFKIPTLRHRESAGLQV*AAGWQE Trigger: CTCCTGCCATCCAGCTGCCCACACCTGCAGTCCAGC...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | ACACTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTGGGCTGATAGACGTGTaGGTGTGGAATGGGAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: TLAVQMIYSHVSSYATGAGLIDV*VWNGSR Trigger: GCGACTCCCATTCCACACTCACACGTCTATCAGCCC...AGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGGATGGCCTCCTTGCTaGTGTGGACCAGGCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRGWPPC*CGPGHW Trigger: CCAATGGCCTGGTCCACAGCAGCAAGGAGGCCATCC...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGTGGCCGGTGGATTCTTaGCCAAACCATAAATGCATT | + |
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Preference number: 4 (lower is better) Translates to: PTLRHRESRVTKRTWEDMWPVDS*PNHKCI Trigger: AATGCATTTATGGTTTGGGCAAGAATCCACCGGCCA...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGAAGGGGGCCCGTCCATaGTCTCACAGCTCCGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRKGARP*SHSSES Trigger: ACTCTCGGAGCTGTGAGAGCATGGACGGGCCCCCTT...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | ACACTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTGATACGGGCTCCAGGTaGGACGGTGTGGAGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TLAVQMIYSHVSSYATGADTGSR*DGVECQ Trigger: TTGACACTCCACACCGTCCCACCTGGAGCCCGTATC...AGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | ACACTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTGTGTCCCAAACAGTGTaGCTGGATGGCCAAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TLAVQMIYSHVSSYATGAVSQTV*LDGQGV Trigger: CACCCCTTGGCCATCCAGCCACACTGTTTGGGACAC...AGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCCCTCGGAGCCTCCTCTaGCTCCAGCTTGGCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: MKVTTLDFKIPTLRHRESPRSLL*LQLGFL Trigger: AAGAAAGCCAAGCTGGAGGCAGAGGAGGCTCCGAGG...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCGTCCCTGGGTCTGTCTaGCTCCTCCGTCTTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: MKVTTLDFKIPTLRHRESVPGSV*LLRLDD Trigger: GTCATCAAGACGGAGGAGCCAGACAGACCCAGGGAC...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCAAGTGTGATGGGACTTaGGCGCTGGACTGCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFKCDGT*ALDCRC Trigger: ACACCTGCAGTCCAGCGCCCAAGTCCCATCACACTT...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGTGACATTGACTTGCTaGACACCAGAGGGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFVTLTC*TPEGAE Trigger: CTCAGCCCCCTCTGGTGTCCAGCAAGTCAATGTCAC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCACCCGAGCTGGACACTaGTTTCTGCATTGTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: MKVTTLDFKIPTLRHRESTRAGH*FLHCWR Trigger: CCGCCAACAATGCAGAAATCAGTGTCCAGCTCGGGT...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR TCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCACCAACTGGATGAGTaGTGGTGTTCTGAAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRHQLDE*WCSEGR Trigger: CCGGCCTTCAGAACACCATCACTCATCCAGTTGGTG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR GCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCTCAGTGACATTGACTTaGTGGACACCAGAGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFSVTLT*WTPEGA Trigger: AGCCCCCTCTGGTGTCCAGCAAGTCAATGTCACTGA...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS-3UTR CCA 90 bp | ACACTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTCCTCTGCCTCCAGCTTaGCTTTCTTCTCATCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLAVQMIYSHVSSYATGAPLPPA*LSSHRF Trigger: GAAGCGATGAGAAGAAAGCCAAGCTGGAGGCAGAGG...AGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGCTAGTGCTGGCCGGTaGATTCTTGCCCAAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFASAGR*ILAQTI Trigger: TATGGTTTGGGCAAGAATCCACCGGCCAGCACTAGC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGCTCTCCAGAGAGCCTaGAGTGGATCTCTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFALQRA*SGSLHR Trigger: TCTGTGAAGAGATCCACTCCAGGCTCTCTGGAGAGC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | ACACTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTAGTACTTGCACCAGCTaGAATCCTGGTGGTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLAVQMIYSHVSSYATGASTCTS*NPGGAL Trigger: GAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACT...AGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR GCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCTGGATAGGCGAGGTTaGAAATCTGGCATGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRLDRRG*KSGMGS Trigger: ACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCAGGGGCTTCACCAACTaGATGAGTGATGGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAVQMIYSHVSSYATGAFRGFTN*MSDGVL Trigger: CAGAACACCATCACTCATCCAGTTGGTGAAGCCCCT...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGTTGCAAATCTGGCATaGGCAGTACTTGCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRVANLA*AVLAPA Trigger: AGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAAC...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTTGGATTTCCCAAACAGTGTGGCTaGATGGCCAAGGGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLSHVGANFSHESNYFGFPKQCG*MAKGWG Trigger: CCCCCACCCCTTGGCCATCCAGCCACACTGTTTGGG...AAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCACTCTAACCCGAGCTaGACACTGATTTCTGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRHSNPS*TLISAL Trigger: CAATGCAGAAATCAGTGTCCAGCTCGGGTTAGAGTG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCTCCAATGTCCAGAGTaGGCATGGCATTCAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRLQCPE*AWHSST Trigger: AGTACTTGAATGCCATGCCCACTCTGGACATTGGAG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTTGGATTTGCGTTTTCGCTTCCCTaGACGAGGCTGATAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLSHVGANFSHESNYFGFAFSLP*TRLINP Trigger: TGGGTTTATCAGCCTCGTCCAGGGAAGCGAAAACGC...AAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTTGGATTTCTGGAGACGCTGGGCTaGAAAAGTGTGATGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: MLSHVGANFSHESNYFGFLETLG*KSVMGL Trigger: AAGTCCCATCACACTTTTCCAGCCCAGCGTCTCCAG...AAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTTGGATTTAAAGGAGAACCGAGGTaGTGTCCCAAACAGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLSHVGANFSHESNYFGFKGEPR*CPKQCG Trigger: GCCACACTGTTTGGGACACCACCTCGGTTCTCCTTT...AAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR TCA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCATCTGGATAGTCTCTaGAAGGATAGTCTCTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRHLDSL*KDSLYL Trigger: TAAATAGAGACTATCCTTTCAGAGACTATCCAGATG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS TCA 90 bp | GCCTCCCCGCACGACGAGGCCACCGCGGCCATGGCGGCCGTGGCCTaGGCCGACGGCGACTGGGAGCGCTCTGCGGCCGCGGCCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASPHDEATAAMAAVA*ADGDWERSAAAARK Trigger: CTTCCGGGCCGCGGCCGCAGAGCGCTCCCAGTCGCCGTCGGCTCAGGCCACGGCCGCCATGGCCGCGGTGGCCTCGTCGTGCGGGGAGGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS GCA 90 bp | GGAGGCAACAGCAGCAGCTCCGGCCTCAGCTGCAGCAGGCGCGCCTaGGCGGACGAGGCGGCGGCGGCAGCGGCAGCGGCGGCGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGNSSSSGLSCSRRA*ADEAAAAAAAAAAA Trigger: AGCCGCCGCCGCCGCTGCCGCTGCCGCCGCCGCCTCGTCCGCGCAGGCGCGCCTGCTGCAGCTGAGGCCGGAGCTGCTGCTGTTGCCTCC 80% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS GCA 90 bp | CCCGGTCCTCCGGGAGGCAGCAGCAGCACCTGTTCCGGCTTCACTTaGAGCAGGCGTCGCGTCCCTGCCGCCTGCGCACCCGCCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGPPGGSSSTCSGFT*SRRRVPAACAPAAA Trigger: CGCGGCGGCGGGTGCGCAGGCGGCAGGGACGCGACGCCTGCTGCAAGTGAAGCCGGAACAGGTGCTGCTGCTGCCTCCCGGAGGACCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS CCA 90 bp | GCGGCTGGGCCAGGATGGCCTCCTTGCTGCTGTGGACCAGGCCATTaGACGTGGCCTCCGTGCCCAGCCTACAATCGTCCCTGGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGPGWPPCCCGPGH*TWPPCPAYNRPWVC Trigger: ACAGACCCAGGGACGATTGTAGGCTGGGCACGGAGGCCACGTCCAATGGCCTGGTCCACAGCAGCAAGGAGGCCATCCTGGCCCAGCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS TCA 90 bp | GGACGGCCACTGGGCCAGTGCTGGAGACGCTGGGCTGGAAAAGTGTaGTGGGACTTGGGCGCTGGACTGCAGGTGTGGGCAGCTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GRPLGQCWRRWAGKV*WDLGAGLQVWAAGW Trigger: CCATCCAGCTGCCCACACCTGCAGTCCAGCGCCCAAGTCCCATCACACTTTTCCAGCCCAGCGTCTCCAGCACTGGCCCAGTGGCCGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS GCA 90 bp | CTTCCCCACCGTGGCCATGGCTGCTGTAGTAAGGGGGCCCGTCCATaGTCTCACAGCTCCGAGAGTCTTCACTGTGTGTGTGCTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPHRGHGCCSKGARP*SHSSESLHCVCAHL Trigger: CAGATGAGCACACACACAGTGAAGACTCTCGGAGCTGTGAGAGCATGGACGGGCCCCCTTACTACAGCAGCCATGGCCACGGTGGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS GCA 90 bp | GAGTGGGCATGGCATTCAAGTACTCTTCCCCACCGTGGCCATGGCTaGTGTAGTAAGGGGGCCCGTCCATGCTCTCACAGCTCCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EWAWHSSTLPHRGHG*CSKGARPCSHSSES Trigger: ACTCTCGGAGCTGTGAGAGCATGGACGGGCCCCCTTACTACAGCAGCCATGGCCACGGTGGGGAAGAGTACTTGAATGCCATGCCCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | CCTACGCTGAGGCATCGGGAGTCCAGGGTCACTAAGAGAACTTGGGAAGACATGGCGGCTGGGTTAGCTTaGGCTAGTGCTGGCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTLRHRESRVTKRTWEDMAAGLA*ASAGRW Trigger: CCACCGGCCAGCACTAGCCAAAGCTAACCCAGCCGC...CATGTCTTCCCAAGTTCTCTTAGTGACCCTGGACTCCCGATGCCTCAGCGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS TCA 90 bp | CTCGTCGCTGTCAGTGACATTGACTTGCTGGACACCAGAGGGGGCTaGGGCTGGGGCTGTGAAGACATTCTCCAAGGCTCCAATGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVAVSDIDLLDTRGG*GWGCEDILQGSNVQ Trigger: CTGGACATTGGAGCCTTGGAGAATGTCTTCACAGCCCCAGCCTCAGCCCCCTCTGGTGTCCAGCAAGTCAATGTCACTGACAGCGACGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS GCA 90 bp | AGGAGGCTGGATAGGCGAGGTTGCAAATCTGGCATGGGCAGTACTTaGACCAGCTGGAATCCTGGTGGTGCTCTCCAGAGAGCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRLDRRGCKSGMGST*TSWNPGGALQRAWS Trigger: ACTCCAGGCTCTCTGGAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAGCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS CCA 90 bp | AGTACTTGCACCAGCTGGAATCCTGGTGGTGCTCTCCAGAGAGCCTaGAGTGGATCTCTTCACAGAGCGACTGCTTCCCGAAGGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: STCTSWNPGGALQRA*SGSLHRATASRREP Trigger: AGGCTCCCTTCGGGAAGCAGTCGCTCTGTGAAGAGATCCACTCCAGGCTCTCTGGAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS GCA 90 bp | CAAATCTGGCATGGGCAGTACTTGCACCAGCTGGAATCCTGGTGGTaGTCTCCAGAGAGCCTGGAGTGGATCTCTTCACAGAGCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QIWHGQYLHQLESWW*SPESLEWISSQSDC Trigger: GCAGTCGCTCTGTGAAGAGATCCACTCCAGGCTCTCTGGAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCAGATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS CCA 90 bp | TTGCAAATCTGGCATGGGCAGTACTTGCACCAGCTGGAATCCTGGTaGTGCTCTCCAGAGAGCCTGGAGTGGATCTCTTCACAGAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQIWHGQYLHQLESW*CSPESLEWISSQSD Trigger: GTCGCTCTGTGAAGAGATCCACTCCAGGCTCTCTGGAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS CCA 90 bp | GCATACTCCTTAGGAGGCTGGATAGGCGAGGTTGCAAATCTGGCATaGGCAGTACTTGCACCAGCTGGAATCCTGGTGGTGCTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AYSLGGWIGEVANLA*AVLAPAGILVVLSR Trigger: TCTGGAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAGCCTCCTAAGGAGTATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS CCA 90 bp | GTGCTTCGGGGACAAGTGGAAACGCTGGCATACTCCTTAGGAGGCTaGATAGGCGAGGTTGCAAATCTGGCATGGGCAGTACTTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VLRGQVETLAYSLGG*IGEVANLAWAVLAP Trigger: TGGTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAGCCTCCTAAGGAGTATGCCAGCGTTTCCACTTGTCCCCGAAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCGCCCGCCCCCAGCTCTaGCTTCTCGGCCTTGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAVQMIYSHVSSYATGAFARPQL*LLGLDE Trigger: CTCGTCAAGGCCGAGAAGCAAGAGCTGGGGGCGGGC...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS GCA 90 bp | AGTGGAAACGCTGGCATACTCCTTAGGAGGCTGGATAGGCGAGGTTaGAAATCTGGCATGGGCAGTACTTGCACCAGCTGGAATCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGNAGILLRRLDRRG*KSGMGSTCTSWNPG Trigger: ACCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAGCCTCCTAAGGAGTATGCCAGCGTTTCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCCGGTGCCATCCAACTaGGCGGCCCTCGAGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRPVPSN*AALEAL Trigger: GAGAGCCTCGAGGGCCGCCAAGTTGGATGGCACCGG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | CTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTTTCATGGCCAGCAGGCTCTaGCCTTCCCCGCCTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAVQMIYSHVSSYATGAFMASRL*PSPPFS Trigger: GCTGAAAGGCGGGGAAGGCAAGAGCCTGCTGGCCAT...GAAAGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGCCAGGATGGCCTCCTaGCTGCTGTGGACCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRARMAS*LLWTRP Trigger: TGGCCTGGTCCACAGCAGCAAGGAGGCCATCCTGGC...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAAACACTGATTTCTGCATaGTTGGCGGCTGGGTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HERHLVLTPQIMAENTQQTLISA*LAAGLA Trigger: AGCTAACCCAGCCGCCAACAATGCAGAAATCAGTGT...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGTGGCATGGGCAGTACTaGCACCAGCTGGAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRWHGQY*HQLESW Trigger: CCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCA...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCGTCAGTGACATTGACTaGCTGGACACCAGAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MKVTTLDFKIPTLRHRESVSDID*LDTRGG Trigger: GCCCCCTCTGGTGTCCAGCAAGTCAATGTCACTGAC...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | ATGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTTGGATTTCTGTTCCGGCTTCACTaGCAGCAGGCGTCGCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLSHVGANFSHESNYFGFLFRLH*QQASRP Trigger: GGGACGCGACGCCTGCTGCAAGTGAAGCCGGAACAG...AAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | TCAGCCATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGCCTATGAATGTCAGTTaGGGAAGGCCCAGAAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAMKVTTLDFKIPTLRHRPMNVS*GRPRKA Trigger: CGCTTTTCTGGGCCTTCCCAAACTGACATTCATAGG...CCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCATGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGTAACTACTTTGGATTTTAAGATCCCTACGCTGAGGCATCGGGAGTCCTGTTCTTCACTAAGTTaGTTCCACTCTAACCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MKVTTLDFKIPTLRHRESCSSLS*FHSNPS Trigger: GCTCGGGTTAGAGTGGAACAAACTTAGTGAAGAACA...GGACTCCCGATGCCTCAGCGTAGGGATCTTAAAATCCAAAGTAGTTACTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAACAAGACATTCTGGCATaGAACTTGGAAAATTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HERHLVLTPQIMAENTQQQDILA*NLENFH Trigger: ATGGAAATTTTCCAAGTTCAATGCCAGAATGTCTTG...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | CATGAACGGCACTTGGTCCTGACTCCTCAGATCATGGCTGAAAACACTCAGCAAGATAGCCTCATGTTTTaGGTATCTGTCTTCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HERHLVLTPQIMAENTQQDSLMF*VSVFIV Trigger: TACTATGAAGACAGATACCAAAAACATGAGGCTATC...TTGCTGAGTGTTTTCAGCCATGATCTGAGGAGTCAGGACCAAGTGCCGTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | ACACTTGCTGTGCAGATGATATACTCACATGTGTCCTCATATGCCACAGGAGCTATTCTGGCATTGAACTaGGAAAATTTCCATAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLAVQMIYSHVSSYATGAILALN*ENFHSQ Trigger: TTGGCTATGGAAATTTTCCAAGTTCAATGCCAGAAT...AGCTCCTGTGGCATATGAGGACACATGTGAGTATATCATCTGCACAGCAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | ATGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTTGGATTTTCGCTGTCAGTGACATaGACTTGCTGGACACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: MLSHVGANFSHESNYFGFSLSVT*TCWTPE Trigger: CTCTGGTGTCCAGCAAGTCAATGTCACTGACAGCGA...AAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS-3UTR CAA 90 bp | ATGCTATCACATGTTGGTGCAAATTTCAGCCATGAAAGTAACTACTTTGGATTTCTGATTTCTGCATTGTaGGCGGCTGGGTTAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSHVGANFSHESNYFGFLISAL*AAGLAL Trigger: CAAAGCTAACCCAGCCGCCAACAATGCAGAAATCAG...AAATCCAAAGTAGTTACTTTCATGGCTGAAATTTGCACCAACATGTGATAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
||
| CDS TCA 90 bp | AGTGATGGTGTTCTGAAGGCCGGGAATTACCACAGAGTAGGTAGGTaGGCGATAAGGATAAATTGTTGTAGGATTTGTAGAGATAATATT | + |
|
Preference number: 5 (lower is better) Translates to: SDGVLKAGNYHRVGR*AIRINCCRICRDNI Trigger: AATATTATCTCTACAAATCCTACAACAATTTATCCTTATCGCTCACCTACCTACTCTGTGGTAATTCCCGGCCTTCAGAACACCATCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS TCA 72 bp | CACGACGAGGCCACCGCGGCCATGGCGGCCGTGGCCTaGGCCGACGGCGACTGGGAGCGCTCTGCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: HDEATAAMAAVA*ADGDWERSAAA Trigger: CGCGGCCGCAGAGCGCTCCCAGTCGCCGTCGGCTCAGGCCACGGCCGCCATGGCCGCGGTGGCCTCGTCGTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | CCGGGAGGCAGCAGCAGCACCTGTTCCGGCTTCACTTaGAGCAGGCGTCGCGTCCCTGCCGCCTGCGCACCC | + |
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Preference number: 6 (lower is better) Translates to: PGGSSSTCSGFT*SRRRVPAACAP Trigger: GGGTGCGCAGGCGGCAGGGACGCGACGCCTGCTGCAAGTGAAGCCGGAACAGGTGCTGCTGCTGCCTCCCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | TCCGGGAGGCAGCAGCAGCACCTGTTCCGGCTTCACTaGCAGCAGGCGTCGCGTCCCTGCCGCCTGCGCACC | + |
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Preference number: 6 (lower is better) Translates to: SGRQQQHLFRLH*QQASRPCRLRT Trigger: GGTGCGCAGGCGGCAGGGACGCGACGCCTGCTGCAAGTGAAGCCGGAACAGGTGCTGCTGCTGCCTCCCGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | AGATCCCACCGACAGGTCCAAGCCCGCCCCCAGCTCTaGCTTCTCGGCCTTGACGAGCAGCGTCCGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSHRQVQARPQL*LLGLDEQRPGL Trigger: CAGCCCCGGACGCTGCTCGTCAAGGCCGAGAAGCAAGAGCTGGGGGCGGGCTTGGACCTGTCGGTGGGATCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | GCCAGGATGGCCTCCTTGCTGCTGTGGACCAGGCCATaGGACGTGGCCTCCGTGCCCAGCCTACAATCGTCC | + |
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Preference number: 6 (lower is better) Translates to: ARMASLLLWTRP*DVASVPSLQSS Trigger: GGACGATTGTAGGCTGGGCACGGAGGCCACGTCCAATGGCCTGGTCCACAGCAGCAAGGAGGCCATCCTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS TCA 72 bp | CTGGGCCAGTGCTGGAGACGCTGGGCTGGAAAAGTGTaGTGGGACTTGGGCGCTGGACTGCAGGTGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGQCWRRWAGKV*WDLGAGLQVWA Trigger: TGCCCACACCTGCAGTCCAGCGCCCAAGTCCCATCACACTTTTCCAGCCCAGCGTCTCCAGCACTGGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | TGCTGCTGTGGACCAGGCCATTGGACGTGGCCTCCGTaGCCAGCCTACAATCGTCCCTGGGTCTGTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CCCGPGHWTWPP*PAYNRPWVCLA Trigger: AGCCAGACAGACCCAGGGACGATTGTAGGCTGGGCACGGAGGCCACGTCCAATGGCCTGGTCCACAGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | TTCCCCGCCTTTCAGCGCATCCCTCGGAGCCTCCTCTaGCTCCAGCTTGGCTTTCTTCTCATCGCTTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: FPAFQRIPRSLL*LQLGFLLIASA Trigger: CGCCGAAGCGATGAGAAGAAAGCCAAGCTGGAGGCAGAGGAGGCTCCGAGGGATGCGCTGAAAGGCGGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CCA 72 bp | CTCCGTGCCCAGCCTACAATCGTCCCTGGGTCTGTCTaGCTCCTCCGTCTTGATGACTCCTTCTCCGATGGC | + |
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Preference number: 6 (lower is better) Translates to: LRAQPTIVPGSV*LLRLDDSFSDG Trigger: GCCATCGGAGAAGGAGTCATCAAGACGGAGGAGCCAGACAGACCCAGGGACGATTGTAGGCTGGGCACGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | GTGAGTGTGGAATGGGAGTCGCCGGGGGTATCGGAGTaGTTCGGGGACAAGTGGAAACGCTGGCATACTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSVEWESPGVSE*FGDKWKRWHTP Trigger: AGGAGTATGCCAGCGTTTCCACTTGTCCCCGAAGCACTCCGATACCCCCGGCGACTCCCATTCCACACTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | CGTGGCCATGGCTGCTGTAGTAAGGGGGCCCGTCCATaGTCTCACAGCTCCGAGAGTCTTCACTGTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RGHGCCSKGARP*SHSSESLHCVC Trigger: ACACACACAGTGAAGACTCTCGGAGCTGTGAGAGCATGGACGGGCCCCCTTACTACAGCAGCCATGGCCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | TGGCATTCAAGTACTCTTCCCCACCGTGGCCATGGCTaGTGTAGTAAGGGGGCCCGTCCATGCTCTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: WHSSTLPHRGHG*CSKGARPCSHS Trigger: GCTGTGAGAGCATGGACGGGCCCCCTTACTACAGCAGCCATGGCCACGGTGGGGAAGAGTACTTGAATGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CCA 72 bp | TCTTCCTCCTCGTCGCTGTCAGTGACATTGACTTGCTaGACACCAGAGGGGGCTGAGGCTGGGGCTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSLSVTLTC*TPEGAEAGAVK Trigger: CTTCACAGCCCCAGCCTCAGCCCCCTCTGGTGTCCAGCAAGTCAATGTCACTGACAGCGACGAGGAGGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CCA 72 bp | CTGGAATCCTGGTGGTGCTCTCCAGAGAGCCTGGAGTaGATCTCTTCACAGAGCGACTGCTTCCCGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LESWWCSPESLE*ISSQSDCFPKG Trigger: TCCCTTCGGGAAGCAGTCGCTCTGTGAAGAGATCCACTCCAGGCTCTCTGGAGAGCACCACCAGGATTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | CATGGGCAGTACTTGCACCAGCTGGAATCCTGGTGGTaGTCTCCAGAGAGCCTGGAGTGGATCTCTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: HGQYLHQLESWW*SPESLEWISSQ Trigger: CTGTGAAGAGATCCACTCCAGGCTCTCTGGAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACTGCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | GCTGGCATACTCCTTAGGAGGCTGGATAGGCGAGGTTaGAAATCTGGCATGGGCAGTACTTGCACCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AGILLRRLDRRG*KSGMGSTCTSW Trigger: CCAGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAGCCTCCTAAGGAGTATGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | CACTCTAACCCGAGCTGGACACTGATTTCTGCATTGTaGGCGGCTGGGTTAGCTTTGGCTAGTGCTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: HSNPSWTLISAL*AAGLALASAGR Trigger: CCGGCCAGCACTAGCCAAAGCTAACCCAGCCGCCAACAATGCAGAAATCAGTGTCCAGCTCGGGTTAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | GATAGGCGAGGTTGCAAATCTGGCATGGGCAGTACTTaGACCAGCTGGAATCCTGGTGGTGCTCTCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: DRRGCKSGMGST*TSWNPGGALQR Trigger: TCTCTGGAGAGCACCACCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGCCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CCA 72 bp | TTAGGAGGCTGGATAGGCGAGGTTGCAAATCTGGCATaGGCAGTACTTGCACCAGCTGGAATCCTGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LGGWIGEVANLA*AVLAPAGILVV Trigger: CACCACCAGGATTCCAGCTGGTGCAAGTACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAGCCTCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CCA 72 bp | AGACATTCTCCAAGGCTCCAATGTCCAGAGTGGGCATaGCATTCAAGTACTCTTCCCCACCGTGGCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: RHSPRLQCPEWA*HSSTLPHRGHG Trigger: GCCATGGCCACGGTGGGGAAGAGTACTTGAATGCCATGCCCACTCTGGACATTGGAGCCTTGGAGAATGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CCA 72 bp | GGACAAGTGGAAACGCTGGCATACTCCTTAGGAGGCTaGATAGGCGAGGTTGCAAATCTGGCATGGGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: GQVETLAYSLGG*IGEVANLAWAV Trigger: TACTGCCCATGCCAGATTTGCAACCTCGCCTATCCAGCCTCCTAAGGAGTATGCCAGCGTTTCCACTTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | ACACTGATTTCTGCATTGTTGGCGGCTGGGTTAGCTTaGGCTAGTGCTGGCCGGTGGATTCTTGCCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: TLISALLAAGLA*ASAGRWILAQT Trigger: GGTTTGGGCAAGAATCCACCGGCCAGCACTAGCCAAAGCTAACCCAGCCGCCAACAATGCAGAAATCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | TTCCACTCTAACCCGAGCTGGACACTGATTTCTGCATaGTTGGCGGCTGGGTTAGCTTTGGCTAGTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: FHSNPSWTLISA*LAAGLALASAG Trigger: GCCAGCACTAGCCAAAGCTAACCCAGCCGCCAACAATGCAGAAATCAGTGTCCAGCTCGGGTTAGAGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 90 bp | CCGAGCTGGACACTGATTTCTGCATTGTTGGCGGCTGGGTTAGCTTaGGCTAGTGCTGGCCGGTGGATTCTTGCCCAAACCATAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: PSWTLISALLAAGLA*ASAGRWILAQTINA Trigger: TGCATTTATGGTTTGGGCAAGAATCCACCGGCCAGCACTAGCCAAAGCTAACCCAGCCGCCAACAATGCAGAAATCAGTGTCCAGCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS GCA 72 bp | TTCCATAGCCAAAGGGAGGCCGACTATAAGGGCACGTaGTTGACGGGAAGTAATGAGGTCCAGGTAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: FHSQREADYKGT*LTGSNEVQVGS Trigger: ACTTCCTACCTGGACCTCATTACTTCCCGTCAAGCACGTGCCCTTATAGTCGGCCTCCCTTTGGCTATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 90 bp | AGTTTGTTCCACTCTAACCCGAGCTGGACACTGATTTCTGCATTGTaGGCGGCTGGGTTAGCTTTGGCTAGTGCTGGCCGGTGGATTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLFHSNPSWTLISAL*AAGLALASAGRWIL Trigger: AAGAATCCACCGGCCAGCACTAGCCAAAGCTAACCCAGCCGCCAACAATGCAGAAATCAGTGTCCAGCTCGGGTTAGAGTGGAACAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 90 bp | CTAAGTTTGTTCCACTCTAACCCGAGCTGGACACTGATTTCTGCATaGTTGGCGGCTGGGTTAGCTTTGGCTAGTGCTGGCCGGTGGATT | + |
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Preference number: 6 (lower is better) Translates to: LSLFHSNPSWTLISA*LAAGLALASAGRWI Trigger: AATCCACCGGCCAGCACTAGCCAAAGCTAACCCAGCCGCCAACAATGCAGAAATCAGTGTCCAGCTCGGGTTAGAGTGGAACAAACTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 90 bp | GTAGGATTTGTAGAGATAATATTCTGTGTGGTACCAGAAAATACATaGGAAACACTTAGAGGGAAGCGTTTTCGCTTCCCTGGACGAGGC | + |
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Preference number: 6 (lower is better) Translates to: VGFVEIIFCVVPENT*ETLRGKRFRFPGRG Trigger: GCCTCGTCCAGGGAAGCGAAAACGCTTCCCTCTAAGTGTTTCCAATGTATTTTCTGGTACCACACAGAATATTATCTCTACAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 90 bp | TTTGGTATCTGTCTTCATAGTAACCAAGACATTCTGGCATTGAACTaGGAAAATTTCCATAGCCAAAGGGAGGCCGACTATAAGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: FGICLHSNQDILALN*ENFHSQREADYKGT Trigger: CGTGCCCTTATAGTCGGCCTCCCTTTGGCTATGGAAATTTTCCAAGTTCAATGCCAGAATGTCTTGGTTACTATGAAGACAGATACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | TGTCTTCATAGTAACCAAGACATTCTGGCATTGAACTaGGAAAATTTCCATAGCCAAAGGGAGGCCGACTAT | + |
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Preference number: 6 (lower is better) Translates to: CLHSNQDILALN*ENFHSQREADY Trigger: ATAGTCGGCCTCCCTTTGGCTATGGAAATTTTCCAAGTTCAATGCCAGAATGTCTTGGTTACTATGAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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| CDS CAA 72 bp | GTAGAGATAATATTCTGTGTGGTACCAGAAAATACATaGGAAACACTTAGAGGGAAGCGTTTTCGCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VEIIFCVVPENT*ETLRGKRFRFP Trigger: AGGGAAGCGAAAACGCTTCCCTCTAAGTGTTTCCAATGTATTTTCTGGTACCACACAGAATATTATCTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049038.4 |
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