Pregenerated sensors for SOX12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051817Ensembl transcript IDs: ENSMUST00000063332.9, ENSMUST00000182625.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTGGTGGCGTTGTCAGCGAAGGGAACGCGTGGGGCAGAGACCTaGAGAGACCCAGGGCAGGGGTCGAGGAGGACTCTGGGACCGTTT | + |
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Preference number: 1 (lower is better) Translates to: QLVALSAKGTRGAET*RDPGQGSRRTLGPF Trigger: AAACGGTCCCAGAGTCCTCCTCGACCCCTGCCCTGGGTCTCTGCAGGTCTCTGCCCCACGCGTTCCCTTCGCTGACAACGCCACCAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 90 bp | GCTTTAAAGGAGGCAGCTGGTGGCGTTGTCAGCGAAGGGAACGCGTaGGGCAGAGACCTGCAGAGACCCAGGGCAGGGGTCGAGGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: ALKEAAGGVVSEGNA*GRDLQRPRAGVEED Trigger: GTCCTCCTCGACCCCTGCCCTGGGTCTCTGCAGGTCTCTGCCCCACGCGTTCCCTTCGCTGACAACGCCACCAGCTGCCTCCTTTAAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 90 bp | GAAAGGCCCAGAGCCGGAGCACCAAGCTTTAAAGGAGGCAGCTGGTaGCGTTGTCAGCGAAGGGAACGCGTGGGGCAGAGACCTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ERPRAGAPSFKGGSW*RCQRRERVGQRPAE Trigger: CTCTGCAGGTCTCTGCCCCACGCGTTCCCTTCGCTGACAACGCCACCAGCTGCCTCCTTTAAAGCTTGGTGCTCCGGCTCTGGGCCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 90 bp | CAAGAAAGGCCCAGAGCCGGAGCACCAAGCTTTAAAGGAGGCAGCTaGTGGCGTTGTCAGCGAAGGGAACGCGTGGGGCAGAGACCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QERPRAGAPSFKGGS*WRCQRRERVGQRPA Trigger: TGCAGGTCTCTGCCCCACGCGTTCCCTTCGCTGACAACGCCACCAGCTGCCTCCTTTAAAGCTTGGTGCTCCGGCTCTGGGCCTTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 90 bp | CAGAACCACAGGGCAAGGTCGGGGCAAATACACTTTATTCAGTCCTaGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAGCGCCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: QNHRARSGQIHFIQS*HQTGESCCGCQRPR Trigger: TCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTGCCCCGACCTTGCCCTGTGGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR TCA 90 bp | TCTTGGAATATATGGCTGTCTACAGAGGCTTGCACCCTTGCACTGTaGCATCAGCACCCACCCCAGTCCTCCCAGTTACGATGCTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: SWNIWLSTEACTLAL*HQHPPQSSQLRCLA Trigger: GGCTAAGCATCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGCCATATATTCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR TCA 90 bp | CAACGCATGGGGGAGAAAGGTACAACGAATGCGCCGAGGAAGAACTaGGTAGAACCTCAGGAGAAAACTCTCGGTCTGTTGCCCTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: QRMGEKGTTNAPRKN*VEPQEKTLGLLPSG Trigger: ACCAGAGGGCAACAGACCGAGAGTTTTCTCCTGAGGTTCTACTCAGTTCTTCCTCGGCGCATTCGTTGTACCTTTCTCCCCCATGCGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR GCA 90 bp | CTGCATCTCTTGGAATATATGGCTGTCTACAGAGGCTTGCACCCTTaGACTGTGACATCAGCACCCACCCCAGTCCTCCCAGTTACGATG | + |
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Preference number: 1 (lower is better) Translates to: LHLLEYMAVYRGLHP*TVTSAPTPVLPVTM Trigger: CATCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGCCATATATTCCAAGAGATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 90 bp | TCTCTCCCTTTGAGTGCGCCTCCCATTAAGGCAGTGACGCCCCTTTaGGTTGAGAGTAAGCTACAGGCTTCGGGATCAAAGGATTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: SLPLSAPPIKAVTPL*VESKLQASGSKDFL Trigger: TAAGAAATCCTTTGATCCCGAAGCCTGTAGCTTACTCTCAACCCAAAGGGGCGTCACTGCCTTAATGGGAGGCGCACTCAAAGGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR GCA 90 bp | CTCATGATTTCCTCCCAGTTTGCTTCCAACCAGAAGCAGAGAAGATaGCCTGAAAAGATCCACACCCAGTCCTGGCTTATTAGGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: LMISSQFASNQKQRR*PEKIHTQSWLIRKM Trigger: CATTTTCCTAATAAGCCAGGACTGGGTGTGGATCTTTTCAGGGCATCTTCTCTGCTTCTGGTTGGAAGCAAACTGGGAGGAAATCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR TCA 90 bp | ATTTTGCTTCCCAATCCTTTATTAAACAGTGGAATTGACCCCGGATaGTCAGTCCTGCCTGCATGCATGCTTGTCTCGTCTGACCTAATG | + |
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Preference number: 1 (lower is better) Translates to: ILLPNPLLNSGIDPG*SVLPACMLVSSDLM Trigger: CATTAGGTCAGACGAGACAAGCATGCATGCAGGCAGGACTGATCATCCGGGGTCAATTCCACTGTTTAATAAAGGATTGGGAAGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 90 bp | GAACTCTGTCCCCAGACTGGTAGGTGTCTTGGTTCTGAGTTCTCTTaGACAATCCCATCTTGGTGGATTTCCAAAGACCGAATTCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: ELCPQTGRCLGSEFS*TIPSWWISKDRILN Trigger: ATTTAGAATTCGGTCTTTGGAAATCCACCAAGATGGGATTGTCCAAGAGAACTCAGAACCAAGACACCTACCAGTCTGGGGACAGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 90 bp | ACTGGTAGGTGTCTTGGTTCTGAGTTCTCTTGGACAATCCCATCTTaGTGGATTTCCAAAGACCGAATTCTAAATTCCCACTTGGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: TGRCLGSEFSWTIPS*WISKDRILNSHLGK Trigger: TTTCCCCAAGTGGGAATTTAGAATTCGGTCTTTGGAAATCCACCAAGATGGGATTGTCCAAGAGAACTCAGAACCAAGACACCTACCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR TCA 90 bp | AATACTGCTTACCTCAAGCATGGTTTCCCACTGAAAATACCATGTTaGTCCTTAGAAGACACACACTGTAGAGCTGCTCAGAACATAGGC | + |
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Preference number: 1 (lower is better) Translates to: NTAYLKHGFPLKIPC*SLEDTHCRAAQNIG Trigger: GCCTATGTTCTGAGCAGCTCTACAGTGTGTGTCTTCTAAGGATCAACATGGTATTTTCAGTGGGAAACCATGCTTGAGGTAAGCAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAGCGCCCCAGAGCGCGGTGGAGGGTGGTaGTGGGCGTGGGTGACCCCT | + |
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Preference number: 2 (lower is better) Translates to: FSPGIRLASPAVGASAPERGGGW*WAWVTP Trigger: AGGGGTCACCCACGCCCACCACCACCCTCCACCGCG...CTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTGTAAAGGCAGTCACGCGGTGGAGGGTGGTGGTGGGCGTGGGTGACCCCGGCCTGCAGCTTAACTaGGACCTGCCCCCTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: WAVKAVTRWRVVVGVGDPGLQLN*DLPPPR Trigger: TCTTGGAGGGGGCAGGTCCCAGTTAAGCTGCAGGCC...GGGGTCACCCACGCCCACCACCACCCTCCACCGCGTGACTGCCTTTACAGCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAGCGCCCCAGAGGGTGGAGGGTGGTGGTaGGCGTGGGTGACCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: FSPGIRLASPAVGASAPEGGGWW*AWVTPS Trigger: TGAAGGGGTCACCCACGCCCACCACCACCCTCCACC...CTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAGGGGTAAAGAGAACCCGTTCTCCCTGCACCAGCCCATACTCTAGGCACCGCGGTGGAGGGTGGTaGTGGGCGTGGGTGACCCCT | + |
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Preference number: 2 (lower is better) Translates to: WPGVKRTRSPCTSPYSRHRGGGW*WAWVTP Trigger: AGGGGTCACCCACGCCCACCACCACCCTCCACCGCG...GTGCCTAGAGTATGGGCTGGTGCAGGGAGAACGGGTTCTCTTTACCCCTGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTAACTACAGCAGTGCCACCCCATTTCTCACAAGGGCAGACCGAGGTGCAGCGCGGGAGATGGGGTaGCAGCCTCGGCCTCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPNYSSATPFLTRADRGAAREMG*QPRPPR Trigger: CCTCGGAGGCCGAGGCTGGCACCCCATCTCCCGCGC...TGCACCTCGGTCTGCCCTTGTGAGAAATGGGGTGGCACTGCTGTAGTTAGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCAGGGGTAAAGAGAACCCGTTCTCCCTGCACCAGCCCATACTCTAGGCACGAGTCCTGCTGTGGGTaGCAGCGCCCCAGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: WPGVKRTRSPCTSPYSRHESCCG*QRPRGG Trigger: CCCTCCTCTGGGGCGCTGGCACCCACAGCAGGACTC...GTGCCTAGAGTATGGGCTGGTGCAGGGAGAACGGGTTCTCTTTACCCCTGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAGCGCCCCAGAGGTTCAAGCTGAGGGGTaGGGCCTTGAGATCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: FSPGIRLASPAVGASAPEVQAEG*GLEIQG Trigger: CCCCTGGATCTCAAGGCCCCACCCCTCAGCTTGAAC...CTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAGCGCCCCAGAGCTGTATGTAAACAGCTaGTTTGGGGGCGTGCGCGCC | + |
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Preference number: 2 (lower is better) Translates to: FSPGIRLASPAVGASAPELYVNS*FGGVRA Trigger: GGCGCGCACGCCCCCAAACCAGCTGTTTACATACAG...CTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCGCTCTCCCTGCACCAGCCCATACTCTAGGCACTTTGAAGCTGGCCAGCCCAGGCAGAGAGGATaGCCTGAGCTGATAGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: RTRSPCTSPYSRHFEAGQPRQRG*PELIGR Trigger: GCGCCCTATCAGCTCAGGGCATCCTCTCTGCCTGGG...CTGGCCAGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGTAAAGAGAACCCGTTCTCCCTGCACCAGCCCATACTCTAGGCACTTTCAGACTGGCGAGTCCTaGTGTGGGTGCCAGCGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PGVKRTRSPCTSPYSRHFQTGES*CGCQRP Trigger: GGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTG...AAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAACGGGTTCTCTTTACCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAGAGCCGGAGCACCAAGCTTTAAAGGAGGCAGCTGGTGGCGTTGTCAGCCCTCCCTTTCGGAGTTaGCAACAGAGGCCTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GPEPEHQALKEAAGGVVSPPFRS*QQRPAA Trigger: AGCTGCAGGCCTCTGTTGCCAACTCCGAAAGGGAGG...GCTGACAACGCCACCAGCTGCCTCCTTTAAAGCTTGGTGCTCCGGCTCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGGGGCAGCAGGAACTCTGTCCCCAGACTGGTAGGTGTCTTGGTTCTGAGAAGGCAGTCACGCGGTaGAGGGTGGTGGTGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: LRGQQELCPQTGRCLGSEKAVTR*RVVVGV Trigger: CACGCCCACCACCACCCTCCACCGCGTGACTGCCTT...CTCAGAACCAAGACACCTACCAGTCTGGGGACAGAGTTCCTGCTGCCCCCTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATACACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCTGGAGGGGCGGGGCTaGAGCGGGAGACCAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QIHFIQSWHQTGESCCGCLEGRG*SGRPVE Trigger: CTCCACTGGTCTCCCGCTCCAGCCCCGCCCCTCCAG...GCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAGCGCAGCGAAGGGAACGCGTaGGGCAGAGACCTGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HFIQSWHQTGESCCGCQRSEGNA*GRDLQR Trigger: TCTCTGCAGGTCTCTGCCCCACGCGTTCCCTTCGCT...GCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | CCTACCAGGGGGAAGGGTGTGGCCTTGGGCAGACCGACTTCAGGGGCTGACCTTCACTTTATTCAGTCCTaGCATCAGACTGGCGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: PTRGKGVALGRPTSGADLHFIQS*HQTGES Trigger: GGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTG...AAGGTCAGCCCCTGAAGTCGGTCTGCCCAAGGCCACACCCTTCCCCCTGGTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGAGAACCCGCTCTCCCTGCACCAGCCCATACTCTAGGCACTTTGAAGCTTGTAAACAGCTGGTTTaGGGGCGTGCGCGCCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: LKRTRSPCTSPYSRHFEACKQLV*GRARPA Trigger: AGCGGGGCGCGCACGCCCCCAAACCAGCTGTTTACA...AGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCTCTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATTTCTCACAAGGGCAGACCGAGGTGCAAAGCACCCAAGTCCACTACTAGCCACCGTCCCCTGGCCTaGTCTCTCCTCAAGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PISHKGRPRCKAPKSTTSHRPLA*SLLKPS Trigger: ACTTGGCTTGAGGAGAGACCAGGCCAGGGGACGGTG...GCTAGTAGTGGACTTGGGTGCTTTGCACCTCGGTCTGCCCTTGTGAGAAATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGAGGCCACCTCTCAGCATaGGACAACACATTTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGGHLSA*DNTFEG Trigger: TCCCTCAAATGTGTTGTCCCATGCTGAGAGGTGGCC...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGAAGGGGCCCCAATACCTaGTTCCTGTATGTAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGRGPNT*FLYVNS Trigger: GCTGTTTACATACAGGAATCAGGTATTGGGGCCCCT...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR TCA 90 bp | GGGATACCTCAGAATACTTCTAGCCATGGTTGCTTGATGGGGACCCCTCTCCCCGGAATTGACCCCGGATaGTCAGTCCTGCCTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: GIPQNTSSHGCLMGTPLPGIDPG*SVLPAC Trigger: GCATGCAGGCAGGACTGATCATCCGGGGTCAATTCC...GGGGAGAGGGGTCCCCATCAAGCAACCATGGCTAGAAGTATTCTGAGGTATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGACATCAGCACCCACCCCAGTCCTCCCAGTTACGATGCTTAGCCACTGTAGAACCCGCTCTCCCTaGACCAGCCCATACTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: TVTSAPTPVLPVTMLSHCRTRSP*TSPYSR Trigger: CCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCT...ACAGTGGCTAAGCATCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGACCAGTGGAGCAGACTTGGCAACCTAATCTCAACACAGCTTCCTAACTACGGTGGAGGGTGGTGGTaGGCGTGGGTGACCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GDQWSRLGNLISTQLPNYGGGWW*AWVTPS Trigger: TGAAGGGGTCACCCACGCCCACCACCACCCTCCACC...GTAGTTAGGAAGCTGTGTTGAGATTAGGTTGCCAAGTCTGCTCCACTGGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAAGTTTGTTTAGACATGGTCCTCATTCTTGCCACCCGGCTGCTGGTATGAAGGCAGTCACGCGGTaGAGGGTGGTGGTGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: KPSLFRHGPHSCHPAAGMKAVTR*RVVVGV Trigger: CACGCCCACCACCACCCTCCACCGCGTGACTGCCTT...CATACCAGCAGCCGGGTGGCAAGAATGAGGACCATGTCTAAACAAACTTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGACATCAGCACCCACCCCAGTCCTCCCAGTTACGATGCTTAGCCACTGTGAACCACCCAGAGGGTaGACACACGCCGGTGAGATA | + |
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Preference number: 2 (lower is better) Translates to: TVTSAPTPVLPVTMLSHCEPPRG*THAGEI Trigger: TATCTCACCGGCGTGTGTCCACCCTCTGGGTGGTTC...ACAGTGGCTAAGCATCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR TCA 90 bp | GGGATACCTCAGAATACTTCTAGCCATGGTTGCTTGATGGGGACCCCTCTCCCCCTCCCATTAAGGCAGTaGCGCCCCTTTGGGTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: GIPQNTSSHGCLMGTPLPLPLRQ*RPFGLR Trigger: TCTCAACCCAAAGGGGCGTCACTGCCTTAATGGGAG...GGGGAGAGGGGTCCCCATCAAGCAACCATGGCTAGAAGTATTCTGAGGTATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAGAGCCGGAGCACCAAGCTTTAAAGGAGGCAGCTGGTGGCGTTGTCAGCTTCAGTTTCTCCCACTaGATACTGCAGTTGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GPEPEHQALKEAAGGVVSFSFSH*ILQLWL Trigger: CAACCACAACTGCAGTATTCAGTGGGAGAAACTGAA...GCTGACAACGCCACCAGCTGCCTCCTTTAAAGCTTGGTGCTCCGGCTCTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACCAGGGGGAAGGGTGTGGCCTTGGGCAGACCGACTTCAGGGGCTGACCTTTCAGAACATAGGCTCTaGGCAAAGCTACCAATTTTG | + |
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Preference number: 2 (lower is better) Translates to: PTRGKGVALGRPTSGADLSEHRL*AKLPIL Trigger: CAAAATTGGTAGCTTTGCTCAGAGCCTATGTTCTGA...AAGGTCAGCCCCTGAAGTCGGTCTGCCCAAGGCCACACCCTTCCCCCTGGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCTACTCATGATTTCCTCCCAGTTTGCTTCCAACCAGAAGCAGAGAAGATGGCGCGGGAGATGGGGTaGCAGCCTCGGCCTCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSTHDFLPVCFQPEAEKMAREMG*QPRPPR Trigger: CCTCGGAGGCCGAGGCTGGCACCCCATCTCCCGCGC...CATCTTCTCTGCTTCTGGTTGGAAGCAAACTGGGAGGAAATCATGAGTAGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGAGAACCCGCTCTCCCTGCACCAGCCCATACTCTAGGCACTTTGAAGCTAGAACCCGCTCTCCCTaGACCAGCCCATACTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LKRTRSPCTSPYSRHFEARTRSP*TSPYSR Trigger: CCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCT...AGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCTCTTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGAGATTTCCTCCCAGTTTaGTTCCAACCAGAAGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGDFLPV*FQPEAE Trigger: CTCTGCTTCTGGTTGGAAGCAAACTGGGAGGAAATC...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCAAGTTTGTTTAGACATGGTCCTCATTCTTGCCACCCGGCTGCTGGTATGTGTAAACAGCTGGTTTaGGGGCGTGCGCGCCCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: KPSLFRHGPHSCHPAAGMCKQLV*GRARPA Trigger: AGCGGGGCGCGCACGCCCCCAAACCAGCTGTTTACA...CATACCAGCAGCCGGGTGGCAAGAATGAGGACCATGTCTAAACAAACTTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGGGTAAAGAGAACCCGTTCTCCCTGCACCAGCCCATACTCTAGGCACTTTGGTCGAGGAGGACTCTaGGACCGTTTGTTCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGVKRTRSPCTSPYSRHFGRGGL*DRLFLR Trigger: TCTCAGGAACAAACGGTCCCAGAGTCCTCCTCGACC...AAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAACGGGTTCTCTTTACCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGAATCCACACCCAGTCCTaGCTTATTAGGAAAATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGIHTQS*LIRKMG Trigger: GCCCATTTTCCTAATAAGCCAGGACTGGGTGTGGAT...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTAAGTCAGGTCCTAGGCCACCTCTCAGCATGGGACAACACATTTGAGGGAGGAGAAAGTGGGGGTTaGGCTGCCTTGGGGTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LVSQVLGHLSAWDNTFEGGESGG*AALGCV Trigger: GACACACCCCAAGGCAGCCCAACCCCCACTTTCTCC...TCCCTCAAATGTGTTGTCCCATGCTGAGAGGTGGCCTAGGACCTGACTTACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAAGGTCGGGGCAAATACACTTTATTCAGTCCTGGCATCAGACTGGCGAGTGTGAATGAGTGTGTGTaGACCACCCAGAGGGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GQGRGKYTLFSPGIRLASVNECV*TTQRVD Trigger: GTCCACCCTCTGGGTGGTTCACACACACTCATTCAC...ACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTGCCCCGACCTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATACCTCAGAATACTTCTAGCCATGGTTGCTTGATGGGGACCCCTCTCCCCAGCTTAACTGGGACCTaGCCCCTCCAAGAAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: GIPQNTSSHGCLMGTPLPSLTGT*PLQEAS Trigger: TGATGCTTCTTGGAGGGGGCAGGTCCCAGTTAAGCT...GGGGAGAGGGGTCCCCATCAAGCAACCATGGCTAGAAGTATTCTGAGGTATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCCATTAAGGCAGTGACGCCCCTTTGGGTTGAGAGTAAGCTACAGGCTTCGAGCTTAACTGGGACCTaGCCCCTCCAAGAAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: PPIKAVTPLWVESKLQASSLTGT*PLQEAS Trigger: TGATGCTTCTTGGAGGGGGCAGGTCCCAGTTAAGCT...CGAAGCCTGTAGCTTACTCTCAACCCAAAGGGGCGTCACTGCCTTAATGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTAAGTGGGGGTTGGGCTaGCTTGGGGTGTGTCTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: PQLPTLEMKEHNLWSTPPKWGLG*LGVCLR Trigger: CCGCAGACACACCCCAAGGCAGCCCAACCCCCACTT...AGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCACAGGCCCTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGGCCTGCAGCTTAACTaGGACCTGCCCCCTCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GTGPVLPFSMLSTHDFLPGLQLN*DLPPPR Trigger: TCTTGGAGGGGGCAGGTCCCAGTTAAGCTGCAGGCC...TGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAGGGCCTGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCAACCTAATCTCAACACAGCTTCCTAACTACAGCAGTGCCACCCCATTTCTCCACCGTCCCCTGGCCTaGTCTCTCCTCAAGCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GNLISTQLPNYSSATPFLHRPLA*SLLKPS Trigger: ACTTGGCTTGAGGAGAGACCAGGCCAGGGGACGGTG...GAGAAATGGGGTGGCACTGCTGTAGTTAGGAAGCTGTGTTGAGATTAGGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCACAGGCCCTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGTCCTGGCATCAGACTaGCGAGTCCTGCTGTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GTGPVLPFSMLSTHDFLPVLASD*RVLLWV Trigger: CACCCACAGCAGGACTCGCCAGTCTGATGCCAGGAC...TGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAGGGCCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CAA 90 bp | AAGGATTTCTTAGATCACTCTATAATCGCCCCCTCCCTTTCGGAGTaGGCAACAGAGGCCTGCAGCTTAACTGGGACCTGCCCCCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: KDFLDHSIIAPSLSE*ATEACSLTGTCPLQ Trigger: TTGGAGGGGGCAGGTCCCAGTTAAGCTGCAGGCCTCTGTTGCCAACTCCGAAAGGGAGGGGGCGATTATAGAGTGATCTAAGAAATCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CAA 90 bp | CCTGCATCTCTTGGAATATATGGCTGTCTACAGAGGCTTGCACCCTaGCACTGTGACATCAGCACCCACCCCAGTCCTCCCAGTTACGAT | + |
|
Preference number: 2 (lower is better) Translates to: PASLGIYGCLQRLAP*HCDISTHPSPPSYD Trigger: ATCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGCCATATATTCCAAGAGATGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CAA 90 bp | ACTGGTTTCCTGCATCTCTTGGAATATATGGCTGTCTACAGAGGCTaGCACCCTTGCACTGTGACATCAGCACCCACCCCAGTCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TGFLHLLEYMAVYRG*HPCTVTSAPTPVLP Trigger: TGGGAGGACTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGCCATATATTCCAAGAGATGCAGGAAACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAGCCGGAGCACCAAGCTTTAAAGGAGGCAGCTGGTGGCGTTGTCAGCGAAAAAGACCACAGACAGTaGCATCTCTTCACTCACATG | + |
|
Preference number: 2 (lower is better) Translates to: PEPEHQALKEAAGGVVSEKDHRQ*HLFTHM Trigger: CATGTGAGTGAAGAGATGTCACTGTCTGTGGTCTTT...TTCGCTGACAACGCCACCAGCTGCCTCCTTTAAAGCTTGGTGCTCCGGCTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTTGCACCCTTGCACTGTaGCATCAGCACCCACCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PQLPTLEMKEHNLWSTPPCTLAL*HQHPPQ Trigger: CTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCA...AGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCAACCTAATCTCAACACAGCTTCCTAACTACAGCAGTGCCACCCCATTTCTCCCTCCCTTTCGGAGTTaGCAACAGAGGCCTGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GNLISTQLPNYSSATPFLPPFRS*QQRPAA Trigger: AGCTGCAGGCCTCTGTTGCCAACTCCGAAAGGGAGG...GAGAAATGGGGTGGCACTGCTGTAGTTAGGAAGCTGTGTTGAGATTAGGTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCAGAGCCGGAGCACCAAGCTTTAAAGGAGGCAGCTGGTGGCGTTGTCAGCACAATCCCATCTTGGTaGATTTCCAAAGACCGAATT | + |
|
Preference number: 2 (lower is better) Translates to: GPEPEHQALKEAAGGVVSTIPSW*ISKDRI Trigger: AATTCGGTCTTTGGAAATCCACCAAGATGGGATTGT...GCTGACAACGCCACCAGCTGCCTCCTTTAAAGCTTGGTGCTCCGGCTCTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCTACTCATGATTTCCTCCCAGTTTGCTTCCAACCAGAAGCAGAGAAGATGTGGCGAGTCCTGCTGTaGGTGCCAGCGCCCCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSTHDFLPVCFQPEAEKMWRVLL*VPAPQR Trigger: CCTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCA...CATCTTCTCTGCTTCTGGTTGGAAGCAAACTGGGAGGAAATCATGAGTAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGACCAGTGGAGCAGACTTGGCAACCTAATCTCAACACAGCTTCCTAACTACCTCCCATTAAGGCAGTaGCGCCCCTTTGGGTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GDQWSRLGNLISTQLPNYLPLRQ*RPFGLR Trigger: TCTCAACCCAAAGGGGCGTCACTGCCTTAATGGGAG...GTAGTTAGGAAGCTGTGTTGAGATTAGGTTGCCAAGTCTGCTCCACTGGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCACAGGCCCTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGTGAATGAGTGTGTGTaGACCACCCAGAGGGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GTGPVLPFSMLSTHDFLPVNECV*TTQRVD Trigger: GTCCACCCTCTGGGTGGTTCACACACACTCATTCAC...TGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAGGGCCTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGATACCTCAGAATACTTCTAGCCATGGTTGCTTGATGGGGACCCCTCTCCCCGGGACCGTTTGTTCCTaGGATTTGTGTGTGTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GIPQNTSSHGCLMGTPLPGTVCS*DLCVCE Trigger: TTCACACACACACAAATCTCAGGAACAAACGGTCCC...GGGGAGAGGGGTCCCCATCAAGCAACCATGGCTAGAAGTATTCTGAGGTATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGACTGAAAATACCATGTTaGTCCTTAGAAGACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGLKIPC*SLEDTH Trigger: GTGTGTGTCTTCTAAGGATCAACATGGTATTTTCAG...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTTAAATACTCTGGAGGGGCGGGGCTaGAGCGGGAGACCAGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SYSGNEGTQFMEHTTLNTLEGRG*SGRPVE Trigger: CTCCACTGGTCTCCCGCTCCAGCCCCGCCCCTCCAG...AGTATTTAAGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAAGGTCGGGGCAAATACACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCACTTTATTCAGTCCTaGCATCAGACTGGCGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GQGRGKYTLFSPGIRLASHFIQS*HQTGES Trigger: GGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTG...ACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTGCCCCGACCTTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAATACACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCAGGGGCCCCAATACCTaGTTCCTGTATGTAAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: QIHFIQSWHQTGESCCGCRGPNT*FLYVNS Trigger: GCTGTTTACATACAGGAATCAGGTATTGGGGCCCCT...GCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGATTCCTACTCTGGAAATaGAGGAACACAATTTATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGFLLWK*RNTIYG Trigger: TCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAA...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAAGACCGAATTCTAAATTCCCACTTGGGGAAATCAAGTTTCCGGCGACCACTGTATGTAAACAGCTaGTTTGGGGGCGTGCGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: SKDRILNSHLGKSSFRRPLYVNS*FGGVRA Trigger: GGCGCGCACGCCCCCAAACCAGCTGTTTACATACAG...TGGTCGCCGGAAACTTGATTTCCCCAAGTGGGAATTTAGAATTCGGTCTTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCACAGGCCCTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCATTTAAAGGAGGCAGCTaGTGGCGTTGTCAGCGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GTGPVLPFSMLSTHDFLPFKGGS*WRCQRR Trigger: CCTTCGCTGACAACGCCACCAGCTGCCTCCTTTAAA...TGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAGGGCCTGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCCCGGATGATCAGTCCTaGCTGCATGCATGCTTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSPASYSGNEGTQFMEHTPDDQS*LHACLS Trigger: AGACAAGCATGCATGCAGGCAGGACTGATCATCCGG...GGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCTCTCAGCATGGGACAACACATTTGAGGGATACCTCAGAATACTTCTAGCCCCGGATGATCAGTCCTaGCTGCATGCATGCTTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HLSAWDNTFEGYLRILLAPDDQS*LHACLS Trigger: AGACAAGCATGCATGCAGGCAGGACTGATCATCCGG...GGCTAGAAGTATTCTGAGGTATCCCTCAAATGTGTTGTCCCATGCTGAGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAATACACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCGGTTCTGAGTTCTCTTaGACAATCCCATCTTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: QIHFIQSWHQTGESCCGCGSEFS*TIPSWW Trigger: CCACCAAGATGGGATTGTCCAAGAGAACTCAGAACC...GCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCACAGGCCCTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGGGACCGTTTGTTCCTaGGATTTGTGTGTGTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GTGPVLPFSMLSTHDFLPGTVCS*DLCVCE Trigger: TTCACACACACACAAATCTCAGGAACAAACGGTCCC...TGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAGGGCCTGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTAAGTCAGGTCCTAGGCCACCTCTCAGCATGGGACAACACATTTGAGGGAAAAGACCACAGACAGTaGCATCTCTTCACTCACATG | + |
|
Preference number: 2 (lower is better) Translates to: LVSQVLGHLSAWDNTFEGKDHRQ*HLFTHM Trigger: CATGTGAGTGAAGAGATGTCACTGTCTGTGGTCTTT...TCCCTCAAATGTGTTGTCCCATGCTGAGAGGTGGCCTAGGACCTGACTTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCTCTCAGCATGGGACAACACATTTGAGGGATACCTCAGAATACTTCTAGCCGGTGAGAAGTACACATaGAGAACCACAGGGCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: HLSAWDNTFEGYLRILLAGEKYT*RTTGQG Trigger: ACCTTGCCCTGTGGTTCTGCATGTGTACTTCTCACC...GGCTAGAAGTATTCTGAGGTATCCCTCAAATGTGTTGTCCCATGCTGAGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCACAGGCCCTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCACAGAAGCAGAGAAGATaGCCTGAAAAGATCCACACC | + |
|
Preference number: 2 (lower is better) Translates to: GTGPVLPFSMLSTHDFLPQKQRR*PEKIHT Trigger: GGTGTGGATCTTTTCAGGGCATCTTCTCTGCTTCTG...TGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAGGGCCTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATACCTCAGAATACTTCTAGCCATGGTTGCTTGATGGGGACCCCTCTCCCCGTTTCCTGCATCTCTTaGAATATATGGCTGTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: GIPQNTSSHGCLMGTPLPVSCIS*NIWLST Trigger: TGTAGACAGCCATATATTCCAAGAGATGCAGGAAAC...GGGGAGAGGGGTCCCCATCAAGCAACCATGGCTAGAAGTATTCTGAGGTATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTTAAATACTGTGGACACACGCCGGTaGGATACAGGTAGTGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SYSGNEGTQFMEHTTLNTVDTRR*DTGSEG Trigger: GCCCTCACTACCTGTATCTCACCGGCGTGTGTCCAC...AGTATTTAAGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGTTTGCTTCCGCAGAGAAGATGCCCTaGAAAGATCCACACCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LSSLSQCYLLMISSQFASAEKMP*KDPHPV Trigger: GACTGGGTGTGGATCTTTTCAGGGCATCTTCTCTGC...GGAAGCAAACTGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTACTCATGATTTCCTCCCAGTTTGCTTCCAACCAGAAGCAGAGAAGATGAAGGGCAGACCGAGGTaGAAAGCACCCAAGTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: LSTHDFLPVCFQPEAEKMKGRPR*KAPKST Trigger: AGTGGACTTGGGTGCTTTGCACCTCGGTCTGCCCTT...CATCTTCTCTGCTTCTGGTTGGAAGCAAACTGGGAGGAAATCATGAGTAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGTTTGCTTCCTCAGTCCTGCCTGCATaGATGCTTGTCTCGTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LSSLSQCYLLMISSQFASSVLPA*MLVSSD Trigger: GTCAGACGAGACAAGCATGCATGCAGGCAGGACTGA...GGAAGCAAACTGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCGGTTCTGAGTTCTCTTaGACAATCCCATCTTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSPASYSGNEGTQFMEHTGSEFS*TIPSWW Trigger: CCACCAAGATGGGATTGTCCAAGAGAACTCAGAACC...GGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CAA 90 bp | ATCCCATCTTGGTGGATTTCCAAAGACCGAATTCTAAATTCCCACTaGGGGAAATCAAGTTTCCGGCGACCAAGATGGGCTGTAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: IPSWWISKDRILNSH*GKSSFRRPRWAVKA Trigger: TGCCTTTACAGCCCATCTTGGTCGCCGGAAACTTGATTTCCCCAAGTGGGAATTTAGAATTCGGTCTTTGGAAATCCACCAAGATGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTAGCATGGTTTCCCACTaGAAATACCATGTTGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: PQLPTLEMKEHNLWSTPPSMVSH*KYHVDP Trigger: AGGATCAACATGGTATTTTCAGTGGGAAACCATGCT...AGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTTAAATACTAGAGGCTTGCACCCTTaGACTGTGACATCAGCACCC | + |
|
Preference number: 2 (lower is better) Translates to: SYSGNEGTQFMEHTTLNTRGLHP*TVTSAP Trigger: GGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCT...AGTATTTAAGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGTTTGCTTCCAAAATGGGCGTTTCTTaGGCAGTGACATTCACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSSLSQCYLLMISSQFASKMGVS*AVTFTG Trigger: TCCAGTGAATGTCACTGCTCAAGAAACGCCCATTTT...GGAAGCAAACTGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTGTTTCCTGCATCTCTTaGAATATATGGCTGTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: PQLPTLEMKEHNLWSTPPVSCIS*NIWLST Trigger: TGTAGACAGCCATATATTCCAAGAGATGCAGGAAAC...AGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | TTATCTACTCATGATTTCCTCCCAGTTTGCTTCCAACCAGAAGCAGAGAAGATGAAAGAAACCCTTCCTTaGACTGACTTCTGTTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSTHDFLPVCFQPEAEKMKETLP*TDFCLA Trigger: TGCCAAACAGAAGTCAGTTCAAGGAAGGGTTTCTTT...CATCTTCTCTGCTTCTGGTTGGAAGCAAACTGGGAGGAAATCATGAGTAGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTTAAATACTATGGGACAACACATTTaGGGGATACCTCAGAATACT | + |
|
Preference number: 2 (lower is better) Translates to: SYSGNEGTQFMEHTTLNTMGQHI*GIPQNT Trigger: AGTATTCTGAGGTATCCCTCAAATGTGTTGTCCCAT...AGTATTTAAGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | CAGGAGAGGGCGGAGGGATTCTGGAGCGAAGGGGCGTaGCGTCCGGACACGAGGAGGGGCGTGTGCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QERAEGFWSEGA*RPDTRRGVCKV Trigger: CACTTTGCACACGCCCCTCCTCGTGTCCGGACGGCACGCCCCTTCGCTCCAGAATCCCTCCGCCCTCTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | GGTGATGGACTTAGGGAGGAGCCCAGGCAGAGAGGATaGCCTGAGCTGATAGGGCGCTTCCCGAGGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GDGLREEPRQRG*PELIGRFPRRG Trigger: CCCCCTCCTCGGGAAGCGCCCTATCAGCTCAGGGCATCCTCTCTGCCTGGGCTCCTCCCTAAGTCCATCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCAGGGGGAAGGGTGTGGCCTTGGGCAGACCGACTTCAGGGGCTGACCTTAGGCAGCTGGTGGCGTaGTCAGCGAAGGGAACGCGT | + |
|
Preference number: 3 (lower is better) Translates to: PTRGKGVALGRPTSGADLRQLVA*SAKGTR Trigger: ACGCGTTCCCTTCGCTGACAACGCCACCAGCTGCCT...AAGGTCAGCCCCTGAAGTCGGTCTGCCCAAGGCCACACCCTTCCCCCTGGTAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | TATTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTaGGTGCCAGCGCCCCAGAGGAGGGAATCCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: YSVLASDWRVLL*VPAPQRRESPP Trigger: GGGAGGGGATTCCCTCCTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | GGCAGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTaGCCGGTCCCTGCACAGGGACCACAGGGGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSVGHEGSLTKP*PVPAQGPQGSL Trigger: CAGACTCCCCTGTGGTCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGATCTAGCCATGGTTGCTaGATGGGGACCCCTCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGSSHGC*MGTPLP Trigger: GGGGAGAGGGGTCCCCATCAAGCAACCATGGCTAGA...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | CACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCCTaGTGTGGGTGCCAGCGCCCCAGAGGAGGGAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: HFIQSWHQTGES*CGCQRPRGGNP Trigger: GGGATTCCCTCCTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | AGAGCCGGAGCACCAAGCTTTAAAGGAGGCAGCTGGTaGCGTTGTCAGCGAAGGGAACGCGTGGGGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RAGAPSFKGGSW*RCQRRERVGQR Trigger: TCTCTGCCCCACGCGTTCCCTTCGCTGACAACGCCACCAGCTGCCTCCTTTAAAGCTTGGTGCTCCGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCACCCACCCCAGTCCTCCCAGTTACGATGCTTAGCCACTGTGAAGATGAGTCCCGAGGAGGGGGATaGAGGGGGCAGCAGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: SAPTPVLPVTMLSHCEDESRGGG*RGQQEL Trigger: GAGTTCCTGCTGCCCCCTCAATCCCCCTCCTCGGGA...CTCATCTTCACAGTGGCTAAGCATCGTAACTGGGAGGACTGGGGTGGGTGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | GGGGCAAATACACTTTATTCAGTCCTGGCATCAGACTaGCGAGTCCTGCTGTGGGTGCCAGCGCCCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GANTLYSVLASD*RVLLWVPAPQR Trigger: CCTCTGGGGCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | GGCCGGTCCCTGCACAGGGACCACAGGGGAGTCTGGTaGAAGAAATGCTTGACAGTTTGCCCCACAAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GRSLHRDHRGVW*KKCLTVCPTKH Trigger: GTGCTTTGTGGGGCAAACTGTCAAGCATTTCTTCCACCAGACTCCCCTGTGGTCCCTGTGCAGGGACCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | CCTGGCCGGTCCCTGCACAGGGACCACAGGGGAGTCTaGTGGAAGAAATGCTTGACAGTTTGCCCCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGRSLHRDHRGV*WKKCLTVCPTK Trigger: CTTTGTGGGGCAAACTGTCAAGCATTTCTTCCACCAGACTCCCCTGTGGTCCCTGTGCAGGGACCGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCAGGGGGAAGGGTGTGGCCTTGGGCAGACCGACTTCAGGGGCTGACCTTAGACTGGTAGGTGTCTaGGTTCTGAGTTCTCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PTRGKGVALGRPTSGADLRLVGV*VLSSLG Trigger: TCCAAGAGAACTCAGAACCAAGACACCTACCAGTCT...AAGGTCAGCCCCTGAAGTCGGTCTGCCCAAGGCCACACCCTTCCCCCTGGTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | CAGTGCCACCCCATTTCTCACAAGGGCAGACCGAGGTaGAAAGCACCCAAGTCCACTACTAGCTCTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QCHPISHKGRPR*KAPKSTTSSAT Trigger: GGTGGCAGAGCTAGTAGTGGACTTGGGTGCTTTGCACCTCGGTCTGCCCTTGTGAGAAATGGGGTGGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | CCTTTCGGAGTTGGCAACAGAGGCCTGCAGCTTAACTaGGACCTGCCCCCTCCAAGAAGCATCAAGCATGCG | + |
|
Preference number: 3 (lower is better) Translates to: PFGVGNRGLQLN*DLPPPRSIKHA Trigger: CGCATGCTTGATGCTTCTTGGAGGGGGCAGGTCCCAGTTAAGCTGCAGGCCTCTGTTGCCAACTCCGAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR TCA 72 bp | GAAGGGTGTGGCCTTGGGCAGACCGACTTCAGGGGCTaGCCTTGCTGGAGGTTATTCATTGACCCTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EGCGLGQTDFRG*PCWRLFIDPVS Trigger: GGAAACAGGGTCAATGAATAACCTCCAGCAAGGTCAGCCCCTGAAGTCGGTCTGCCCAAGGCCACACCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | GAGTTGGCAACAGAGGCCTGCAGCTTAACTGGGACCTaGCCCCTCCAAGAAGCATCAAGCATGCGCAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ELATEACSLTGT*PLQEASSMRKK Trigger: CTTCTTGCGCATGCTTGATGCTTCTTGGAGGGGGCAGGTCCCAGTTAAGCTGCAGGCCTCTGTTGCCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | AGGGCAAGGTCGGGGCAAATACACTTTATTCAGTCCTaGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RARSGQIHFIQS*HQTGESCCGCQ Trigger: CTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTGCCCCGACCTTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR TCA 72 bp | ATATGGCTGTCTACAGAGGCTTGCACCCTTGCACTGTaGCATCAGCACCCACCCCAGTCCTCCCAGTTACGA | + |
|
Preference number: 3 (lower is better) Translates to: IWLSTEACTLAL*HQHPPQSSQLR Trigger: TCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | GAGGATAACAGAGGCCTAAAGAGAACCCGCTCTCCCTaGACCAGCCCATACTCTAGGCACTTTGAAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EDNRGLKRTRSP*TSPYSRHFEAG Trigger: GCCAGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCTCTTTAGGCCTCTGTTATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTTGGGCATGAAGGCAGTCTGACAAAGCCCTGGCCGGTCCCTGCACAGGGAGGTTTCCTGCATCTCTaGGAATATATGGCTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SVGHEGSLTKPWPVPAQGGFLHL*EYMAVY Trigger: GTAGACAGCCATATATTCCAAGAGATGCAGGAAACC...TCCCTGTGCAGGGACCGGCCAGGGCTTTGTCAGACTGCCTTCATGCCCAACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | TTGGAATATATGGCTGTCTACAGAGGCTTGCACCCTTaGACTGTGACATCAGCACCCACCCCAGTCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEYMAVYRGLHP*TVTSAPTPVLP Trigger: TGGGAGGACTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGCCATATATTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | TTGAGTGCGCCTCCCATTAAGGCAGTGACGCCCCTTTaGGTTGAGAGTAAGCTACAGGCTTCGGGATCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSAPPIKAVTPL*VESKLQASGSK Trigger: CTTTGATCCCGAAGCCTGTAGCTTACTCTCAACCCAAAGGGGCGTCACTGCCTTAATGGGAGGCGCACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCCAGCGCTTCATAGAAAAGGGGTaGACACTTGCAGAGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: HFIQSWHQTGESCCGCQRFIEKG*TLAEFR Trigger: CCTAAACTCTGCAAGTGTCAACCCCTTTTCTATGAA...GCGCTGGCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAAGCATGGTTTCCCACTGAAAATACCATGTTGATCCTTAGAAGACACACATCCCGAGGAGGGGGATaGAGGGGGCAGCAGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: PQAWFPTENTMLILRRHTSRGGG*RGQQEL Trigger: GAGTTCCTGCTGCCCCCTCAATCCCCCTCCTCGGGA...TGTGTGTCTTCTAAGGATCAACATGGTATTTTCAGTGGGAAACCATGCTTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAGAGAACCCGCTCTCCCTGCACCAGCCCATACTCTAGGCACTTTGAAGCTGGACTCTGGGACCGTTaGTTCCTGAGATTTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LKRTRSPCTSPYSRHFEAGLWDR*FLRFVC Trigger: ACACACAAATCTCAGGAACAAACGGTCCCAGAGTCC...AGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCTCTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGTTTGCTTCCAGGCAGCTGGTGGCGTaGTCAGCGAAGGGAACGCGT | + |
|
Preference number: 3 (lower is better) Translates to: LSSLSQCYLLMISSQFASRQLVA*SAKGTR Trigger: ACGCGTTCCCTTCGCTGACAACGCCACCAGCTGCCT...GGAAGCAAACTGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATACACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCCTGCTGTGGGTGCGGACTCTGGGACCGTTaGTTCCTGAGATTTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QIHFIQSWHQTGESCCGCGLWDR*FLRFVC Trigger: ACACACAAATCTCAGGAACAAACGGTCCCAGAGTCC...GCACCCACAGCAGGACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTAAGTCAGGTCCTAGGCCACCTCTCAGCATGGGACAACACATTTGAGGGACATACTCTAGGCACTTaGAAGCTGGCCAGGGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LVSQVLGHLSAWDNTFEGHTLGT*KLARGK Trigger: TTTACCCCTGGCCAGCTTCAAAGTGCCTAGAGTATG...TCCCTCAAATGTGTTGTCCCATGCTGAGAGGTGGCCTAGGACCTGACTTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR TCA 72 bp | GGTCCTAGGCCACCTCTCAGCATGGGACAACACATTTaGGGGATACCTCAGAATACTTCTAGCCATGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GPRPPLSMGQHI*GIPQNTSSHGC Trigger: GCAACCATGGCTAGAAGTATTCTGAGGTATCCCTCAAATGTGTTGTCCCATGCTGAGAGGTGGCCTAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR TCA 72 bp | CCTGTTTCCTATGGTCTAGGGAAAGAAACCCTTCCTTaGACTGACTTCTGTTTGGCACAGGCCCTGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PVSYGLGKETLP*TDFCLAQALSS Trigger: GGAGGACAGGGCCTGTGCCAAACAGAAGTCAGTTCAAGGAAGGGTTTCTTTCCCTAGACCATAGGAAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTAACTACAGCAGTGCCACCCCATTTCTCACAAGGGCAGACCGAGGTGCAATTCTAAATTCCCACTaGGGGAAATCAAGTTTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: LPNYSSATPFLTRADRGAILNSH*GKSSFR Trigger: CCGGAAACTTGATTTCCCCAAGTGGGAATTTAGAAT...TGCACCTCGGTCTGCCCTTGTGAGAAATGGGGTGGCACTGCTGTAGTTAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR TCA 72 bp | TTCCTATGGTCTAGGGAAAGAAACCCTTCCTTGAACTaGCTTCTGTTTGGCACAGGCCCTGTCCTCCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLWSRERNPSLN*LLFGTGPVLPF Trigger: GAAAGGGAGGACAGGGCCTGTGCCAAACAGAAGTCAGTTCAAGGAAGGGTTTCTTTCCCTAGACCATAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR TCA 72 bp | CGACTTCAGGGGCTGACCTTGCTGGAGGTTATTCATTaGCCCTGTTTCCTATGGTCTAGGGAAAGAAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLQGLTLLEVIH*PCFLWSRERNP Trigger: AGGGTTTCTTTCCCTAGACCATAGGAAACAGGGTCAATGAATAACCTCCAGCAAGGTCAGCCCCTGAAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR GCA 72 bp | TCCTCCCAGTTTGCTTCCAACCAGAAGCAGAGAAGATaGCCTGAAAAGATCCACACCCAGTCCTGGCTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SSQFASNQKQRR*PEKIHTQSWLI Trigger: AATAAGCCAGGACTGGGTGTGGATCTTTTCAGGGCATCTTCTCTGCTTCTGGTTGGAAGCAAACTGGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR CCA 72 bp | CCCCAGACTGGTAGGTGTCTTGGTTCTGAGTTCTCTTaGACAATCCCATCTTGGTGGATTTCCAAAGACCGA | + |
|
Preference number: 3 (lower is better) Translates to: PQTGRCLGSEFS*TIPSWWISKDR Trigger: TCGGTCTTTGGAAATCCACCAAGATGGGATTGTCCAAGAGAACTCAGAACCAAGACACCTACCAGTCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTCCCTTTCTCAATGTTATCTACTCATGATTTCCTCCCAGTTTGCTTCCGCTGTCTACAGAGGCTaGCACCCTTGCACTGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSSLSQCYLLMISSQFASAVYRG*HPCTVT Trigger: TGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGC...GGAAGCAAACTGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR TCA 72 bp | CCCAATCCTTTATTAAACAGTGGAATTGACCCCGGATaGTCAGTCCTGCCTGCATGCATGCTTGTCTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PNPLLNSGIDPG*SVLPACMLVSS Trigger: AGACGAGACAAGCATGCATGCAGGCAGGACTGATCATCCGGGGTCAATTCCACTGTTTAATAAAGGATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGATACCTCAGAATACTTCTAGCCATGGTTGCTTGATGGGGACCCCTCTCCCCGCAAAGCTACCAATTTaGCTTCCCAATCCTTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: GIPQNTSSHGCLMGTPLPAKLPI*LPNPLL Trigger: TAATAAAGGATTGGGAAGCAAAATTGGTAGCTTTGC...GGGGAGAGGGGTCCCCATCAAGCAACCATGGCTAGAAGTATTCTGAGGTATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR TCA 72 bp | AGGCCCTGTCCTCCCTTTCTCAATGTTATCTACTCATaGTTTCCTCCCAGTTTGCTTCCAACCAGAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RPCPPFLNVIYS*FPPSLLPTRSR Trigger: TCTGCTTCTGGTTGGAAGCAAACTGGGAGGAAATCATGAGTAGATAACATTGAGAAAGGGAGGACAGGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR TCA 72 bp | AATTTTGCTTCCCAATCCTTTATTAAACAGTGGAATTaGCCCCGGATGATCAGTCCTGCCTGCATGCATGCT | + |
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Preference number: 3 (lower is better) Translates to: NFASQSFIKQWN*PRMISPACMHA Trigger: AGCATGCATGCAGGCAGGACTGATCATCCGGGGTCAATTCCACTGTTTAATAAAGGATTGGGAAGCAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACTGAAAATACCATGTaGATCCTTAGAAGACACACA | + |
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Preference number: 3 (lower is better) Translates to: LSPASYSGNEGTQFMEHTTENTM*ILRRHT Trigger: TGTGTGTCTTCTAAGGATCAACATGGTATTTTCAGT...GGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 72 bp | TGTCTTGGTTCTGAGTTCTCTTGGACAATCCCATCTTaGTGGATTTCCAAAGACCGAATTCTAAATTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: CLGSEFSWTIPS*WISKDRILNSH Trigger: GTGGGAATTTAGAATTCGGTCTTTGGAAATCCACCAAGATGGGATTGTCCAAGAGAACTCAGAACCAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTTAAATACTAGACTGGTAGGTGTCTaGGTTCTGAGTTCTCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: SYSGNEGTQFMEHTTLNTRLVGV*VLSSLG Trigger: TCCAAGAGAACTCAGAACCAAGACACCTACCAGTCT...AGTATTTAAGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CCA 72 bp | TCGTCTGACCTAATGAGACTTAACAAGCACAATGACTaGTTTCCTGCATCTCTTGGAATATATGGCTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: SSDLMRLNKHND*FPASLGIYGCL Trigger: TAGACAGCCATATATTCCAAGAGATGCAGGAAACCAGTCATTGTGCTTGTTAAGTCTCATTAGGTCAGACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTACCAATTTTGCTTCCCAATCCTTTATTAAACAGTGGAATTGACCCCGGATTCATAGAAAAGGGGTaGACACTTGCAGAGTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: KLPILLPNPLLNSGIDPGFIEKG*TLAEFR Trigger: CCTAAACTCTGCAAGTGTCAACCCCTTTTCTATGAA...TCCGGGGTCAATTCCACTGTTTAATAAAGGATTGGGAAGCAAAATTGGTAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | CCTACCAGGGGGAAGGGTGTGGCCTTGGGCAGACCGACTTCAGGGGCTGACCTTCACGGTCCAGGGCACTaGAGTCCAGGCCGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTRGKGVALGRPTSGADLHGPGH*SPGRRG Trigger: GCCCCGCCGGCCTGGACTGCAGTGCCCTGGACCGTG...AAGGTCAGCCCCTGAAGTCGGTCTGCCCAAGGCCACACCCTTCCCCCTGGTAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGGGGCAGCAGGAACTCTGTCCCCAGACTGGTAGGTGTCTTGGTTCTGAGCACGGTCCAGGGCACTaGAGTCCAGGCCGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGQQELCPQTGRCLGSEHGPGH*SPGRRG Trigger: GCCCCGCCGGCCTGGACTGCAGTGCCCTGGACCGTG...CTCAGAACCAAGACACCTACCAGTCTGGGGACAGAGTTCCTGCTGCCCCCTCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CCA 90 bp | CTTCCTAACTACAGCAGTGCCACCCCATTTCTCACAAGGGCAGACCGAGGTGCAGGTCTTGCACCAGCCTaGCTCGCGCGCCCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPNYSSATPFLTRADRGAGLAPA*LARPLG Trigger: GCCGAGGGGGCGCGCGAGCCAGGCTGGTGCAAGACC...TGCACCTCGGTCTGCCCTTGTGAGAAATGGGGTGGCACTGCTGTAGTTAGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | CCAGCCTCGGCCTCCGAGGGGCCCCAATACCTGATTCCTGTATGTAAACAGCTGCGAGCGCCAGTCCCCTaGGATCATCTCGGTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PASASEGPQYLIPVCKQLRAPVP*DHLGNL Trigger: GAGGTTACCGAGATGATCGCAGGGGACTGGCGCTCG...CAGCTGTTTACATACAGGAATCAGGTATTGGGGCCCCTCGGAGGCCGAGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGTTTGTTTAGACATGGTCCTCATTCTTGCCACCCGGCTGCTGGTATGGGTCTTGCACCAGCCTaGCTCGCGCGCCCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPSLFRHGPHSCHPAAGMGLAPA*LARPLG Trigger: GCCGAGGGGGCGCGCGAGCCAGGCTGGTGCAAGACC...CATACCAGCAGCCGGGTGGCAAGAATGAGGACCATGTCTAAACAAACTTGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CAA 72 bp | CCCGCTCTCCCTGCACCAGCCCATACTCTAGGCACTTaGAAGCTGGCCAGGGGTAAAGAGAACCCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PALPAPAHTLGT*KLARGKENPFS Trigger: GGAGAACGGGTTCTCTTTACCCCTGGCCAGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | CACCTCTCAGCATGGGACAACACATTTGAGGGATACCTCAGAATACTTCTAGCCGGCCGCTCGGGGTCTTaGACCAGCCTGGCTCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLSAWDNTFEGYLRILLAGRSGS*TSLARA Trigger: CGCGCGAGCCAGGCTGGTGCAAGACCCCGAGCGGCC...GGCTAGAAGTATTCTGAGGTATCCCTCAAATGTGTTGTCCCATGCTGAGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | TCCAAAGACCGAATTCTAAATTCCCACTTGGGGAAATCAAGTTTCCGGCGACCAGGCCGCTCGGGGTCTTaGACCAGCCTGGCTCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKDRILNSHLGKSSFRRPGRSGS*TSLARA Trigger: CGCGCGAGCCAGGCTGGTGCAAGACCCCGAGCGGCC...TGGTCGCCGGAAACTTGATTTCCCCAAGTGGGAATTTAGAATTCGGTCTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCTGGCGGGCGCCCCCTTaGTCTTCTTGCGAGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LSPASYSGNEGTQFMEHTWRAPP*SSCEAG Trigger: ACCGGCCTCGCAAGAAGAGCAAGGGGGCGCCCGCCA...GGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGACATCAGCACCCACCCCAGTCCTCCCAGTTACGATGCTTAGCCACTGTGGACAGAAAGCCCAGTaGCTCCTCCCCAGATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVTSAPTPVLPVTMLSHCGQKAQ*LLPRYH Trigger: GTGGTATCTGGGGAGGAGCCACTGGGCTTTCTGTCC...ACAGTGGCTAAGCATCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CAA 72 bp | CACCGTCCCCTGGCCTGGTCTCTCCTCAAGCCAAGTTaGTTTAGACATGGTCCTCATTCTTGCCACCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRPLAWSLLKPS*FRHGPHSCHPA Trigger: AGCCGGGTGGCAAGAATGAGGACCATGTCTAAACAAACTTGGCTTGAGGAGAGACCAGGCCAGGGGACGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGTCGGGGCAAATACACTTTATTCAGTCCTGGCATCAGACTGGCGAGTCGGGCCACTGGTCCATaGTTTTTCTCCGCTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGRGKYTLFSPGIRLASRATGP*FFSARA Trigger: AGCACGAGCGGAGAAAAATCATGGACCAGTGGCCCG...ACTCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTGCCCCGACCTTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CCA 90 bp | CTCTCCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCGGCCCGGGGGCATCCTaGACAGAAAGCCCAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPASYSGNEGTQFMEHTGPGAS*TESPVA Trigger: AGCCACTGGGCTTTCTGTCCAGGATGCCCCCGGGCC...GGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CAA 72 bp | CCCGTTCTCCCTGCACCAGCCCATACTCTAGGCACTTaGAAGCTGGCCAGGGTGAGAAGTACACATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVLPAPAHTLGT*KLARVRSTHAE Trigger: TTCTGCATGTGTACTTCTCACCCTGGCCAGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CAA 72 bp | CTTGGAATATATGGCTGTCTACAGAGGCTTGCACCCTaGCACTGTGACATCAGCACCCACCCCAGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LGIYGCLQRLAP*HCDISTHPSPP Trigger: GGGAGGACTGGGGTGGGTGCTGATGTCACAGTGCAAGGGTGCAAGCCTCTGTAGACAGCCATATATTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | CTAAAGAGAACCCGCTCTCCCTGCACCAGCCCATACTCTAGGCACTTTGAAGCTCCCCCTTGCTCTTCTTaGGAGGCCGGTACTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKRTRSPCTSPYSRHFEAPPCSS*EAGTCS Trigger: ACTACAAGTACCGGCCTCGCAAGAAGAGCAAGGGGG...AGCTTCAAAGTGCCTAGAGTATGGGCTGGTGCAGGGAGAGCGGGTTCTCTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCTTCCTACTCTGGAAATGAAGGAACACAATTTATGGAGCACACCACCTCGAGCGCCAGTCCCCTaGGATCATCTCGGTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQLPTLEMKEHNLWSTPPRAPVP*DHLGNL Trigger: GAGGTTACCGAGATGATCGCAGGGGACTGGCGCTCG...AGGTGGTGTGCTCCATAAATTGTGTTCCTTCATTTCCAGAGTAGGAAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGTTTGTTTAGACATGGTCCTCATTCTTGCCACCCGGCTGCTGGTATGGGACAGAAAGCCCAGTaGCTCCTCCCCAGATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPSLFRHGPHSCHPAAGMGQKAQ*LLPRYH Trigger: GTGGTATCTGGGGAGGAGCCACTGGGCTTTCTGTCC...CATACCAGCAGCCGGGTGGCAAGAATGAGGACCATGTCTAAACAAACTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR GCA 90 bp | AATTCTAAATTCCCACTTGGGGAAATCAAGTTTCCGGCGACCAAGATGGGCTGTCCCCCTTGCTCTTCTTaGGAGGCCGGTACTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKFPLGEIKFPATKMGCPPCSS*EAGTCS Trigger: ACTACAAGTACCGGCCTCGCAAGAAGAGCAAGGGGG...ACAGCCCATCTTGGTCGCCGGAAACTTGATTTCCCCAAGTGGGAATTTAGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR TCA 90 bp | CCTCAAGCATGGTTTCCCACTGAAAATACCATGTTGATCCTTAGAAGACACACACGGGCCACTGGTCCATaGTTTTTCTCCGCTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQAWFPTENTMLILRRHTRATGP*FFSARA Trigger: AGCACGAGCGGAGAAAAATCATGGACCAGTGGCCCG...TGTGTGTCTTCTAAGGATCAACATGGTATTTTCAGTGGGAAACCATGCTTGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CAA 72 bp | TGGTGGATTTCCAAAGACCGAATTCTAAATTCCCACTaGGGGAAATCAAGTTTCCGGCGACCAAGATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WWISKDRILNSH*GKSSFRRPRWA Trigger: AGCCCATCTTGGTCGCCGGAAACTTGATTTCCCCAAGTGGGAATTTAGAATTCGGTCTTTGGAAATCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| 3UTR CAA 72 bp | GACTTAACAAGCACAATGACTGGTTTCCTGCATCTCTaGGAATATATGGCTGTCTACAGAGGCTTGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLTSTMTGFLHL*EYMAVYRGLHP Trigger: AGGGTGCAAGCCTCTGTAGACAGCCATATATTCCAAGAGATGCAGGAAACCAGTCATTGTGCTTGTTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS CCA 90 bp | CTTCCTCCGGCTCCTCGTCCTCGGACAGGGTCGGAGAGGCGGCGCTaGCGGCCGCCCCCTCGCCGGATGGCCCCTGCGCGCGCTCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPAPRPRTGSERRR*RPPPRRMAPARAPR Trigger: CCGCGGAGCGCGCGCAGGGGCCATCCGGCGAGGGGGCGGCCGCCAGCGCCGCCTCTCCGACCCTGTCCGAGGACGAGGAGCCGGAGGAAG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CAA 90 bp | TGGCCAGGGGTAAAGAGAACCCGTTCTCCCTGCACCAGCCCATACTCTAGGCACTTGGCGGGCGCCCCCTaGCTCTTCTTGCGAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WPGVKRTRSPCTSPYSRHLAGAP*LFLRGR Trigger: CCGGCCTCGCAAGAAGAGCAAGGGGGCGCCCGCCAA...GTGCCTAGAGTATGGGCTGGTGCAGGGAGAACGGGTTCTCTTTACCCCTGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CAA 90 bp | ACTGTGACATCAGCACCCACCCCAGTCCTCCCAGTTACGATGCTTAGCCACTGTTTGGCGGGCGCCCCCTaGCTCTTCTTGCGAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TVTSAPTPVLPVTMLSHCLAGAP*LFLRGR Trigger: CCGGCCTCGCAAGAAGAGCAAGGGGGCGCCCGCCAA...ACAGTGGCTAAGCATCGTAACTGGGAGGACTGGGGTGGGTGCTGATGTCACAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CAA 90 bp | GGAGACCAGTGGAGCAGACTTGGCAACCTAATCTCAACACAGCTTCCTAACTACTGGCCGCTCGGGGTCTaGCACCAGCCTGGCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GDQWSRLGNLISTQLPNYWPLGV*HQPGSR Trigger: GCGCGAGCCAGGCTGGTGCAAGACCCCGAGCGGCCA...GTAGTTAGGAAGCTGTGTTGAGATTAGGTTGCCAAGTCTGCTCCACTGGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS-3UTR CAA 90 bp | CACCTCTCAGCATGGGACAACACATTTGAGGGATACCTCAGAATACTTCTAGCCTGGCCGCTCGGGGTCTaGCACCAGCCTGGCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSAWDNTFEGYLRILLAWPLGV*HQPGSR Trigger: GCGCGAGCCAGGCTGGTGCAAGACCCCGAGCGGCCA...GGCTAGAAGTATTCTGAGGTATCCCTCAAATGTGTTGTCCCATGCTGAGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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| CDS GCA 72 bp | AACCAGGTCGGCGATACTAGACGAGCGCCAGTCCCCTaGGATCATCTCGGTAACCTCGGGGGTGCAATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: NQVGDTRRAPVP*DHLGNLGGAIV Trigger: GACTATTGCACCCCCGAGGTTACCGAGATGATCGCAGGGGACTGGCGCTCGTCTAGTATCGCCGACCTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063332.9 ENSMUST00000182625.2 |
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