Pregenerated sensors for SOX11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063632Ensembl transcript IDs: ENSMUST00000079063.7
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACCAGCGCGAAGCCCACGGCGGGGATGGAGACGCAGGGCGGGGTaGGAAGGGAGGACACCGGGCTGCAACCTATGGCAGCCTAAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: GPARSPRRGWRRRAG*EGRTPGCNLWQPKG Trigger: GCCCTTAGGCTGCCATAGGTTGCAGCCCGGTGTCCTCCCTTCTCACCCCGCCCTGCGTCTCCATCCCCGCCGTGGGCTTCGCGCTGGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 90 bp | TGGGCACCGAGTTTCAATTCACTGCTGAAGGGCTCCTCGGTCGCGTaGGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACACCACG | + |
|
Preference number: 1 (lower is better) Translates to: WAPSFNSLLKGSSVA*VAALGSWACARDTT Trigger: CGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCCTTCAGCAGTGAATTGAAACTCGGTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | TATTCCACTGTGGGCAGCTCGCAGCCTGCCCTAAGCATCACTTCCTaGGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCT | + |
|
Preference number: 1 (lower is better) Translates to: YSTVGSSQPALSITS*GPQSCPSCGSWLDA Trigger: AGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAGTGATGCTTAGGGCAGGCTGCGAGCTGCCCACAGTGGAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 90 bp | GCTGGAGCCTCCACATGGGCACATCCAGGTTGCCTAGTGGCCGACTaGTCATCAGGAGGCACACCTCAGCTCCTACCTATTGCTCTTTGT | + |
|
Preference number: 1 (lower is better) Translates to: AGASTWAHPGCLVAD*SSGGTPQLLPIALC Trigger: ACAAAGAGCAATAGGTAGGAGCTGAGGTGTGCCTCCTGATGAGCAGTCGGCCACTAGGCAACCTGGATGTGCCCATGTGGAGGCTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 90 bp | AGTGCCGGCAACCGGAAGTTCCCAGTGTGTGGAAACCACCCTGTCTaGGCACAGGCAGACAGGCACTGGGTCTTCAAAGAATATCGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: SAGNRKFPVCGNHPV*AQADRHWVFKEYRY Trigger: ATAGCGATATTCTTTGAAGACCCAGTGCCTGTCTGCCTGTGCCCAGACAGGGTGGTTTCCACACACTGGGAACTTCCGGTTGCCGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | CTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTaGGACACCAAGACTTTTCAAATCTCTCAGCTTCGAGACAACACT | + |
|
Preference number: 1 (lower is better) Translates to: LRAPVLPKLWVLVGC*DTKTFQISQLRDNT Trigger: AGTGTTGTCTCGAAGCTGAGAGATTTGAAAAGTCTTGGTGTCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 90 bp | TCACTTCCTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTaGATGCTGAGACACCAAGACTTTTCAAATCTCTCAGCTTCGAGA | + |
|
Preference number: 1 (lower is better) Translates to: SLPEGPSPAQAVGPG*MLRHQDFSNLSASR Trigger: TCTCGAAGCTGAGAGATTTGAAAAGTCTTGGTGTCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | CAACACACTACACTCTGCATGCTAGATAACCTCTACCAGAAGACATaGCTTCACCATGCATTTGCTGCCCTAGTGCTACGGGACACTTAC | + |
|
Preference number: 1 (lower is better) Translates to: QHTTLCMLDNLYQKT*LHHAFAALVLRDTY Trigger: GTAAGTGTCCCGTAGCACTAGGGCAGCAAATGCATGGTGAAGTCATGTCTTCTGGTAGAGGTTATCTAGCATGCAGAGTGTAGTGTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | ATTAACACTGCATTCCAAGGAGGGCGGTCACGAAGCTGGTTTGATTaGAGCACAAAGCACAAGCCACTGATACTCTCTTGTGTGATCAGG | + |
|
Preference number: 1 (lower is better) Translates to: INTAFQGGRSRSWFD*STKHKPLILSCVIR Trigger: CCTGATCACACAAGAGAGTATCAGTGGCTTGTGCTTTGTGCTTCAATCAAACCAGCTTCGTGACCGCCCTCCTTGGAATGCAGTGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 90 bp | AAACCAGAGAGCTGTCCAACACATGGAGCTGGGTATTTGTTCTTTTaGTTAAAGTTGACATTGGTCTTACCAGGGGCCCAGAAGTGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: KPESCPTHGAGYLFF*LKLTLVLPGAQKWV Trigger: CACCCACTTCTGGGCCCCTGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGTTGGACAGCTCTCTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 90 bp | CCAGTGTGTGGAAACCACCCTGTCTGGGCACAGGCAGACAGGCACTaGGTCTTCAAAGAATATCGCTATCCAAGAAAATTATTACTTCTA | + |
|
Preference number: 1 (lower is better) Translates to: PVCGNHPVWAQADRH*VFKEYRYPRKLLLL Trigger: TAGAAGTAATAATTTTCTTGGATAGCGATATTCTTTGAAGACCCAGTGCCTGTCTGCCTGTGCCCAGACAGGGTGGTTTCCACACACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | ACACGTCAAGAATCGTTACATGGAGACGTTTACTTTGGGGACTTATaGATTCCTGTTCGGACACATGTAAGGCTCAGTCCTGTCGTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: TRQESLHGDVYFGDL*IPVRTHVRLSPVVL Trigger: AAGCACGACAGGACTGAGCCTTACATGTGTCCGAACAGGAATTCATAAGTCCCCAAAGTAAACGTCTCCATGTAACGATTCTTGACGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | GGAATGGAGTTTGCTGGCATTGGATTCAACATCAGCAACTGCCCCTaGATAATCCCTTCATCCTCTAACTCTGACAAACAGGCTAACCTA | + |
|
Preference number: 1 (lower is better) Translates to: GMEFAGIGFNISNCP*IIPSSSNSDKQANL Trigger: TAGGTTAGCCTGTTTGTCAGAGTTAGAGGATGAAGGGATTATTCAGGGGCAGTTGCTGATGTTGAATCCAATGCCAGCAAACTCCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 90 bp | GGGACGAGGCATAAGGTTTTTGAACACAAGCTGGGTGAAGAGAAATaGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTT | + |
|
Preference number: 1 (lower is better) Translates to: GTRHKVFEHKLGEEK*DRGPFVNIHLIKIL Trigger: AAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTCTCTTCACCCAGCTTGTGTTCAAAAACCTTATGCCTCGTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | TGGGTGAAGAGAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTaGTCAAAATTCTTTTTACGCTATGTCTTGATTATTTCCAGTCGT | + |
|
Preference number: 1 (lower is better) Translates to: WVKRNGIEGPLSISI*SKFFLRYVLIISSR Trigger: ACGACTGGAAATAATCAAGACATAGCGTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTCTCTTCACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 90 bp | TTGAGGTCTGTTATGTATCAAAAATGTTTCAATACCTTTTTGTACTaGGGTCTAGGCTGTAAGGTATTCAATCAAGGAGGTATAAGGGAA | + |
|
Preference number: 1 (lower is better) Translates to: LRSVMYQKCFNTFLY*GLGCKVFNQGGIRE Trigger: TTCCCTTATACCTCCTTGATTGAATACCTTACAGCCTAGACCTCAGTACAAAAAGGTATTGAAACATTTTTGATACATAACAGACCTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | TCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACACCACGAGGGACAAGCTGGCCTGACCGCCACGACTaGCTCCCGAGGAGCCCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: SRPWGVGLARGTPRGTSWPDRHD*LPRSPA Trigger: CGCAGGGCTCCTCGGGAGGCAGTCGTGGCGGTCAGG...CCAGCTTGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | CTAGTGCTACGGGACACTTACGTAGTCCCCCAGCGCACTGCCTCAGGTAGCTTCGCGGCCCTGGGGAGTTaGGCTTGCGCGCGGGACACC | + |
|
Preference number: 2 (lower is better) Translates to: LVLRDTYVVPQRTASGSFAALGS*ACARDT Trigger: GGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGC...GAAGCTACCTGAGGCAGTGCGCTGGGGGACTACGTAAGTGTCCCGTAGCACTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTGAGAGGCTCAGTCCTGTCGTaGTTGCAGGCCACAGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LPEGPSPAQAVGPGWMLRGSVLS*LQATGY Trigger: ATAGCCTGTGGCCTGCAAGCACGACAGGACTGAGCC...TCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | CGGCTAGACTGCTATGCACACAACGCCCACGCCCACGTTACCATTTTAAGATACAGTGCCTGTCTTGCGTaGGGCACCGACCTGGATCCC | + |
|
Preference number: 2 (lower is better) Translates to: RLDCYAHNAHAHVTILRYSACLA*GTDLDP Trigger: GGGATCCAGGTCGGTGCCCCACGCAAGACAGGCACT...GTATCTTAAAATGGTAACGTGGGCGTGGGCGTTGTGTGCATAGCAGTCTAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | CTAGTGCTACGGGACACTTACGTAGTCCCCCAGCGCACTGCCTCAGGTAGCTTCCTCTCAGACTTCAGGTaGCTCTGTCCCGGGAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LVLRDTYVVPQRTASGSFLSDFR*LCPGKQ Trigger: TTGTTTCCCGGGACAGAGCCACCTGAAGTCTGAGAG...GAAGCTACCTGAGGCAGTGCGCTGGGGGACTACGTAAGTGTCCCGTAGCACTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGGCTGTGGGGGAGGGGTaGGCGAGGGAAGCCCGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TQTSKQKGFPAIPLPNLEAVGEG*AREARK Trigger: TTTTCGGGCTTCCCTCGCCCACCCCTCCCCCACAGC...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACACTGGGGAGTTGGGCTTaGGCGCGGGACACCACGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QSIQTRVLQNKWEQLIPTLGSWA*ARDTTR Trigger: CCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAG...TGTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTGAGATTTTACGCTATGTCTTaGTTATTTCCAGTCGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LPEGPSPAQAVGPGWMLRFYAMS*LFPVVL Trigger: CAGAACGACTGGAAATAATCAAGACATAGCGTAAAA...TCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGGGCTCTAGGCGCATTTaGTTTCCTCGTGCCCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: TQTSKQKGFPAIPLPNLEGSRRI*FPRAPP Trigger: GGGTGGGGCACGAGGAAAGCAAATGCGCCTAGAGCC...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 90 bp | CCAACACATGGAGCTGGGTATTTGTTCTTTTGCTTAAAGTTGACATaGGTCTTACCAGGGGCCCAGAAGTGGGTGTGTGAGCCACGCATG | + |
|
Preference number: 2 (lower is better) Translates to: PTHGAGYLFFCLKLT*VLPGAQKWVCEPRM Trigger: CATGCGTGGCTCACACACCCACTTCTGGGCCCCTGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | CTAGTGCTACGGGACACTTACGTAGTCCCCCAGCGCACTGCCTCAGGTAGCTTCTCAAAAGGGAAGAAGTaGCTGAAAGTCTTACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LVLRDTYVVPQRTASGSFSKGKK*LKVLLK Trigger: TTTCAGTAAGACTTTCAGGCACTTCTTCCCTTTTGA...GAAGCTACCTGAGGCAGTGCGCTGGGGGACTACGTAAGTGTCCCGTAGCACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 90 bp | AGCTGTCCAACACATGGAGCTGGGTATTTGTTCTTTTGCTTAAAGTaGACATTGGTCTTACCAGGGGCCCAGAAGTGGGTGTGTGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SCPTHGAGYLFFCLK*TLVLPGAQKWVCEP Trigger: TGGCTCACACACCCACTTCTGGGCCCCTGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGTTGGACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGACTTCGACAGTGCATTaGGTCTGCTTCGCCACCATT | + |
|
Preference number: 2 (lower is better) Translates to: TQTSKQKGFPAIPLPNLETSTVH*VCFATI Trigger: AATGGTGGCGAAGCAGACTCAATGCACTGTCGAAGT...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | GAACACATGCAAATGTTAAGAACTCAAGACACTCAGAATGCCTTTTCCTTAGGCCCGCCCGGTCCCCTCTaGCTTTGTTGCAATCACGAA | + |
|
Preference number: 2 (lower is better) Translates to: EHMQMLRTQDTQNAFSLGPPGPL*LCCNHE Trigger: TTCGTGATTGCAACAAAGGCAGAGGGGACCGGGCGG...GCCTAAGGAAAAGGCATTCTGAGTGTCTTGAGTTCTTAACATTTGCATGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACAGTTTGATCAAACAGTaGGGCTGGAGCCTCCACATG | + |
|
Preference number: 2 (lower is better) Translates to: TVHSNKGVTEQMGTTDTHSLIKQ*GWSLHM Trigger: CATGTGGAGGCTCCAGCCTCACTGTTTGATCAAACT...GTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACGCTGGAGCCTCCACATaGGCACATCCAGGTTGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: EMGSRALCQYPFDQNSFYAGAST*AHPGCL Trigger: TAGGCAACCTGGATGTGCCCATGTGGAGGCTCCAGC...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | CAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACATCTTTGTGGCTGTGGTaGACTGTGTTTGTCAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: QSIQTRVLQNKWEQLIPTSLWLW*TVFVKC Trigger: GCACTTGACAAACACAGTTCACCACAGCCACAAAGA...TGTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | GCACACAACGCCCACGCCCACGTTACCATTTTAAGATACTGTCAATGCTCAGTTTTCAATAGAGTTCACTaGGAATGGTCTTCACAATGC | + |
|
Preference number: 2 (lower is better) Translates to: AHNAHAHVTILRYCQCSVFNRVH*EWSSQC Trigger: GCATTGTGAAGACCATTCCCAGTGAACTCTATTGAA...AACTGAGCATTGACAGTATCTTAAAATGGTAACGTGGGCGTGGGCGTTGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGGGAATGAATGGGAAGTaGCTTGGCTTCAGTACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TQTSKQKGFPAIPLPNLEGMNGK*LGFSTF Trigger: AAAAGTACTGAAGCCAAGCCACTTCCCATTCATTCC...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 90 bp | CCCGGCGGTGACTTCGACAGTGCATTGAGTCTGCTTCGCCACCATTaGCTACTAAATATGCAATGGTCTGTTTATTTAATTATATTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PGGDFDSALSLLRHH*LLNMQWSVYLIILH Trigger: GTGCAATATAATTAAATAAACAGACCATTGCATATTTAGTAGCAAATGGTGGCGAAGCAGACTCAATGCACTGTCGAAGTCACCGCCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACGGTGTGCAACTACCTTaGGACACGATAAAGGACGGG | + |
|
Preference number: 2 (lower is better) Translates to: EMGSRALCQYPFDQNSFYGVQLP*DTIKDG Trigger: CCCGTCCTTTATCGTGTCTCAAGGTAGTTGCACACC...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGAATACCTTTTTGTACTaGGGTCTAGGCTGTAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: TQTSKQKGFPAIPLPNLENTFLY*GLGCKV Trigger: TACCTTACAGCCTAGACCTCAGTACAAAAAGGTATT...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | CAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACACCAGTAAACCGCTGGTaGAATTATTCGCGGCTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QSIQTRVLQNKWEQLIPTPVNRW*NYSRLK Trigger: TTTAAGCCGCGAATAATTTCACCAGCGGTTTACTGG...TGTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACGCTATGCTTCCATTCTaGAGCCAGATCCTCACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EMGSRALCQYPFDQNSFYAMLPF*SQILTP Trigger: AGGAGTGAGGATCTGGCTTCAGAATGGAAGCATAGC...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACCCCCAAACCAAAACCTaGGTTGTTATCAAAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TVHSNKGVTEQMGTTDTHPQTKT*VVIKEQ Trigger: TTGCTCTTTGATAACAACTCAGGTTTTGGTTTGGGG...GTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACAATGGAACGTTATGAGTaGATTTCCCTTTGTACGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QSIQTRVLQNKWEQLIPTMERYE*ISLCTP Trigger: TGGCGTACAAAGGGAAATCCACTCATAACGTTCCAT...TGTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 90 bp | CTGGGTGAAGAGAAATGGGATCGAGGGCCCTTTGTCAATATCCATTaGATCAAAATTCTTTTTACGCTATGTCTTGATTATTTCCAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: LGEEKWDRGPFVNIH*IKILFTLCLDYFQS Trigger: CGACTGGAAATAATCAAGACATAGCGTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTCTCTTCACCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACCCCCTCTGCCTTTGTTaGAATCACGAATTTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: EMGSRALCQYPFDQNSFYPLCLC*NHEFQE Trigger: TTCCTGAAATTCGTGATTGCAACAAAGGCAGAGGGG...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR GCA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACTACAAATTGCAGCTATaGTTCCATTCTGAAGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: EMGSRALCQYPFDQNSFYYKLQL*FHSEAR Trigger: TCTGGCTTCAGAATGGAAGCATAGCTGCAATTTGTA...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 72 bp | TCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTTaGGCGCGGGACACCACGAGGGACAAGCTGGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SVACVAALGSWA*ARDTTRDKLAG Trigger: CCCCGCCAGCTTGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | GGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTaGGCTTGCGCGCGGGACACCACGAGGGACAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSSVACVAALGS*ACARDTTRDKL Trigger: CAGCTTGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | CGAAGCCCACGGCGGGGATGGAGACGCAGGGCGGGGTaGGAAGGGAGGACACCGGGCTGCAACCTATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RSPRRGWRRRAG*EGRTPGCNLWQ Trigger: CTGCCATAGGTTGCAGCCCGGTGTCCTCCCTTCTCACCCCGCCCTGCGTCTCCATCCCCGCCGTGGGCTTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | GCCTGTCTTGCGTGGGGCACCGACCTGGATCCCTACTaGTCAAGTCCCCGCGGTCAGCGCCCGCGCCGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: ACLAWGTDLDPY*SSPRGQRPRRN Trigger: ATTACGGCGCGGGCGCTGACCGCGGGGACTTGACCAGTAGGGATCCAGGTCGGTGCCCCACGCAAGACAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | GTGGGCAGCTCGCAGCCTGCCCTAAGCATCACTTCCTaGGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VGSSQPALSITS*GPQSCPSCGSW Trigger: CCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAGTGATGCTTAGGGCAGGCTGCGAGCTGCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 72 bp | AGTTTCAATTCACTGCTGAAGGGCTCCTCGGTCGCGTaGGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SFNSLLKGSSVA*VAALGSWACAR Trigger: CCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCCTTCAGCAGTGAATTGAAACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACTGCTTCGCCACCATTaGCTACTAAATATGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: GLLGRVRRGPGELGLRAGLLRHH*LLNMQW Trigger: CCATTGCATATTTAGTAGCAAATGGTGGCGAAGCAG...TCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | GAGGGCGAGCTCTCTATCTGCAGTGCCTGTCTTGCGTaGGGCACCGACCTGGATCCCTACTGGTCAAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EGELSICSACLA*GTDLDPYWSSP Trigger: GGGACTTGACCAGTAGGGATCCAGGTCGGTGCCCCACGCAAGACAGGCACTGCAGATAGAGAGCTCGCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 72 bp | AGTGAGGCTGGAGCCTCCACATGGGCACATCCAGGTTaGCTAGTGGCCGACTGCTCATCAGGAGGCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: SEAGASTWAHPG*LVADCSSGGTP Trigger: AGGTGTGCCTCCTGATGAGCAGTCGGCCACTAGGCAACCTGGATGTGCCCATGTGGAGGCTCCAGCCTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTGAGAAGGTGTGCAACTACCTaGAGACACGATAAAGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: LPEGPSPAQAVGPGWMLRRCATT*RHDKGR Trigger: CCGTCCTTTATCGTGTCTCAAGGTAGTTGCACACCT...TCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | TTTGTCAAGTGCCGGCAACCGGAAGTTCCCAGTGTGTaGAAACCACCCTGTCTGGGCACAGGCAGACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FVKCRQPEVPSV*KPPCLGTGRQA Trigger: TGCCTGTCTGCCTGTGCCCAGACAGGGTGGTTTCCACACACTGGGAACTTCCGGTTGCCGGCACTTGACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 72 bp | ACTAGGTACAGGAGCAGGGTACCCAACCGGCTAGACTaGTATGCACACAACGCCCACGCCCACGTTACCATT | + |
|
Preference number: 3 (lower is better) Translates to: TRYRSRVPNRLD*YAHNAHAHVTI Trigger: AATGGTAACGTGGGCGTGGGCGTTGTGTGCATAGCAGTCTAGCCGGTTGGGTACCCTGCTCCTGTACCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 72 bp | GTACAGGAGCAGGGTACCCAACCGGCTAGACTGCTATaGACACAACGCCCACGCCCACGTTACCATTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VQEQGTQPARLL*TQRPRPRYHFK Trigger: CTTAAAATGGTAACGTGGGCGTGGGCGTTGTGTGCATAGCAGTCTAGCCGGTTGGGTACCCTGCTCCTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | GCCGTAATGGTTTCTGTGGGTCTAGAGTCGGGCTGTTaGGCACCGAGTTTCAATTCACTGCTGAAGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AVMVSVGLESGC*APSFNSLLKGS Trigger: GGAGCCCTTCAGCAGTGAATTGAAACTCGGTGCCCAACAGCCCGACTCTAGACCCACAGAAACCATTACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | AACCGGAAGTTCCCAGTGTGTGGAAACCACCCTGTCTaGGCACAGGCAGACAGGCACTGGGTCTTCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NRKFPVCGNHPV*AQADRHWVFKE Trigger: TTCTTTGAAGACCCAGTGCCTGTCTGCCTGTGCCCAGACAGGGTGGTTTCCACACACTGGGAACTTCCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | GAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTaGATGCTGAGACACCAAGACTTTTCAAATCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EGPSPAQAVGPG*MLRHQDFSNLS Trigger: TGAGAGATTTGAAAAGTCTTGGTGTCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTGAGAGCCACTGATACTCTCTaGTGTGATCAGGTTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LPEGPSPAQAVGPGWMLRATDTL*CDQVFT Trigger: TGTAAAAACCTGATCACACAAGAGAGTATCAGTGGC...TCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | CTTAGGCTTCAGAATCTGTCCCCAGTAAACCGCTGGTaGAATTATTCGCGGCTTAAAGGTCCCCGCGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LRLQNLSPVNRW*NYSRLKGPRVA Trigger: AGCCACGCGGGGACCTTTAAGCCGCGAATAATTTCACCAGCGGTTTACTGGGGACAGATTCTGAAGCCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | CCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTaGGACACCAAGACTTTTCAAATCTCTCAGCTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: PVLPKLWVLVGC*DTKTFQISQLR Trigger: TCGAAGCTGAGAGATTTGAAAAGTCTTGGTGTCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | CACTGCATTCCAAGGAGGGCGGTCACGAAGCTGGTTTaGTTGAAGCACAAAGCACAAGCCACTGATACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HCIPRRAVTKLV*LKHKAQATDTL Trigger: GAGAGTATCAGTGGCTTGTGCTTTGTGCTTCAATCAAACCAGCTTCGTGACCGCCCTCCTTGGAATGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTGCTACGGGACACTTACGTAGTCCCCCAGCGCACTGCCTCAGGTAGCTTCAAAAACACAGCAAGATaGTTCCCTTTTCACTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: LVLRDTYVVPQRTASGSFKNTAR*FPFHCT Trigger: TGTACAGTGAAAAGGGAACAATCTTGCTGTGTTTTT...GAAGCTACCTGAGGCAGTGCGCTGGGGGACTACGTAAGTGTCCCGTAGCACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | GCATTCCAAGGAGGGCGGTCACGAAGCTGGTTTGATTaGAGCACAAAGCACAAGCCACTGATACTCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: AFQGGRSRSWFD*STKHKPLILSC Trigger: ACAAGAGAGTATCAGTGGCTTGTGCTTTGTGCTTCAATCAAACCAGCTTCGTGACCGCCCTCCTTGGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 72 bp | TGTTCGGACACATGTAAGGCTCAGTCCTGTCGTGCTTaGAGGCCACAGGCTATACAAAGGGTATCTGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: CSDTCKAQSCRA*RPQAIQRVSET Trigger: AGTTTCAGATACCCTTTGTATAGCCTGTGGCCTGCAAGCACGACAGGACTGAGCCTTACATGTGTCCGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | TTCAGGGGACGAGGCATAAGGTTTTTGAACACAAGCTaGGTGAAGAGAAATGGGATCGAGGGCCCTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FRGRGIRFLNTS*VKRNGIEGPLS Trigger: TGACAAAGGGCCCTCGATCCCATTTCTCTTCACCCAGCTTGTGTTCAAAAACCTTATGCCTCGTCCCCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | GGAAACCACCCTGTCTGGGCACAGGCAGACAGGCACTaGGTCTTCAAAGAATATCGCTATCCAAGAAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: GNHPVWAQADRH*VFKEYRYPRKL Trigger: TAATTTTCTTGGATAGCGATATTCTTTGAAGACCCAGTGCCTGTCTGCCTGTGCCCAGACAGGGTGGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | CAGAAGAGACTACATAAAAGAAGTTTGATCAAACAGTaGGGCTGGAGCCTCCACATGGGCACATCCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QKRLHKRSLIKQ*GWSLHMGTSRL Trigger: CAACCTGGATGTGCCCATGTGGAGGCTCCAGCCTCACTGTTTGATCAAACTTCTTTTATGTAGTCTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR GCA 72 bp | AGCTGTCCAACACATGGAGCTGGGTATTTGTTCTTTTaGTTAAAGTTGACATTGGTCTTACCAGGGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SCPTHGAGYLFF*LKLTLVLPGAQ Trigger: CTGGGCCCCTGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGTTGGACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | AGACTAAGGGCCATGCGAGCTTCTATCCGATCCTGCTaGTTTATTAAAATCAAGACACAGACTTCAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: RLRAMRASIRSC*FIKIKTQTSAH Trigger: GTGTGCTGAAGTCTGTGTCTTGATTTTAATAAATCAGCAGGATCGGATAGAAGCTCGCATGGCCCTTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | GAATCGTTACATGGAGACGTTTACTTTGGGGACTTATaGATTCCTGTTCGGACACATGTAAGGCTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ESLHGDVYFGDL*IPVRTHVRLSP Trigger: AGGACTGAGCCTTACATGTGTCCGAACAGGAATTCATAAGTCCCCAAAGTAAACGTCTCCATGTAACGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACACGTCAAGAATCGTTACATGGAGACGTTTACTTTGGGGACTTATGAATCGGTCCCCTCTGCCTTaGTTGCAATCACGAATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RNTSRIVTWRRLLWGLMNRSPLP*LQSRIS Trigger: TGAAATTCGTGATTGCAACAAAGGCAGAGGGGACCG...ATTCATAAGTCCCCAAAGTAAACGTCTCCATGTAACGATTCTTGACGTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | GCCAACTCTCAGAGAAACACGTCAAGAATCGTTACATaGAGACGTTTACTTTGGGGACTTATGAATTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ANSQRNTSRIVT*RRLLWGLMNSC Trigger: ACAGGAATTCATAAGTCCCCAAAGTAAACGTCTCCATGTAACGATTCTTGACGTGTTTCTCTGAGAGTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | CATAAGGTTTTTGAACACAAGCTGGGTGAAGAGAAATaGGATCGAGGGCCCTTTGTCAATATCCATTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: HKVFEHKLGEEK*DRGPFVNIHLI Trigger: GATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTCTCTTCACCCAGCTTGTGTTCAAAAACCTTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | AACACGTCAAGAATCGTTACATGGAGACGTTTACTTTaGGGACTTATGAATTCCTGTTCGGACACATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: NTSRIVTWRRLL*GLMNSCSDTCK Trigger: CTTACATGTGTCCGAACAGGAATTCATAAGTCCCCAAAGTAAACGTCTCCATGTAACGATTCTTGACGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACTCCCCTCTGCCTTTGTaGCAATCACGAATTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EMGSRALCQYPFDQNSFYSPLPL*QSRISG Trigger: TCCTGAAATTCGTGATTGCAACAAAGGCAGAGGGGA...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACTATTTCCCAGATTCCTaGGGCAAAACTCATTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVHSNKGVTEQMGTTDTHYFPDS*GKTHLN Trigger: ATTCAAATGAGTTTTGCCCAAGGAATCTGGGAAATA...GTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACATGGAGACGTTTACTTaGGGGACTTATGAATTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: EMGSRALCQYPFDQNSFYMETFT*GTYEFL Trigger: CAGGAATTCATAAGTCCCCAAAGTAAACGTCTCCAT...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | TTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTaGTACCCACAACATATGTACAAGAGCAAAAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FKQGCYRTNGNN*YPQHMYKSKSR Trigger: TCTACTTTTGCTCTTGTACATATGTTGTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | TATATAAAAACCAGAGAGCTGTCCAACACATGGAGCTaGGTATTTGTTCTTTTGCTTAAAGTTGACATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: YIKTRELSNTWS*VFVLLLKVDIG Trigger: ACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGTTGGACAGCTCTCTGGTTTTTATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | GTTATGTATCAAAAATGTTTCAATACCTTTTTGTACTaGGGTCTAGGCTGTAAGGTATTCAATCAAGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VMYQKCFNTFLY*GLGCKVFNQGG Trigger: ACCTCCTTGATTGAATACCTTACAGCCTAGACCTCAGTACAAAAAGGTATTGAAACATTTTTGATACATAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR TCA 72 bp | ATACAGAATACCCCATCAGAGAATAAGAAAGCCGAGTaGTGGAGTATATTTCTATTGAATGACTACTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IQNTPSENKKAE*WSIFLLNDYLK Trigger: TTTCAAGTAGTCATTCAATAGAAATATACTCCATCACTCGGCTTTCTTATTCTCTGATGGGGTATTCTGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CCA 72 bp | AATATCGCTATCCAAGAAAATTATTACTTCTATACATaGAACGTTATGAGTGGATTTCCCTTTGTACGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: NIAIQENYYFYT*NVMSGFPFVRH Trigger: ATGGCGTACAAAGGGAAATCCACTCATAACGTTCCATGTATAGAAGTAATAATTTTCTTGGATAGCGATATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACTCTTGTCGGGGCTCTaGCCCGCGCTGGGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLGRVRRGPGELGLRAGLLSGL*PALGLA Trigger: GGCCAAGCCCAGCGCGGGCCAGAGCCCCGACAAGAG...TCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | CTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTaGCGCGCGGGACACCACGAGGGACAAGCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGRVRRGPGELG*RAGHHEGQAGG Trigger: CCCGCCAGCTTGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGAGGCCCGACGCCGTCTTaGACCAGTCCGGGTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLGRVRRGPGELGLRAGGPTPS*TSPGRS Trigger: AGAGCGACCCGGACTGGTGCAAGACGGCGTCGGGCC...TCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | GGGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTaGGGCTTGCGCGCGGGACACCACGAGGGACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLGRVRRGPGE*GLRAGHHEGQA Trigger: AGCTTGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACGCTCAGCTCCGGCGTaGAGTAGTCGGGGAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLLGRVRRGPGELGLRAGRSAPA*SSRGTR Trigger: TCGAGTTCCCCGACTACTGCACGCCGGAGCTGAGCG...TCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGAGCGCTGTGCGCGCCCTaGGAGAAATTCAAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGRVRRGPGELGLRAGALCAP*EKFKLR Trigger: CCTGAGCTTGAATTTCTCCCAGGGCGCGCACAGCGC...TCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR GCA 90 bp | CGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACACCACGAGGGACAGGCGCGGGCGGAGGCTaGTGCTTGGTGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RASRPWGVGLARGTPRGTGAGGG*CLVMFL Trigger: CAAGAACATCACCAAGCAGCAGCCTCCGCCCGCGCC...TGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR TCA 90 bp | TCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACACCACGAGGGACAAGCTGGCGTTCATGGGCCGTTTaGTGTGGCCCGACGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRPWGVGLARGTPRGTSWRSWAV*CGPTPS Trigger: AGACGGCGTCGGGCCACATCAAACGGCCCATGAACG...CCAGCTTGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CCA 90 bp | CGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGACACCACGAGGGACAATGGGCCGTTTGATGTaGCCCGACGCCGTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RASRPWGVGLARGTPRGTMGRLM*PDAVLH Trigger: GTGCAAGACGGCGTCGGGCCACATCAAACGGCCCAT...TGTCCCTCGTGGTGTCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR TCA 90 bp | CTAGTGCTACGGGACACTTACGTAGTCCCCCAGCGCACTGCCTCAGGTAGCTTCAGCTCAGGTCGAACATaGGGTCGTCTGCATCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLRDTYVVPQRTASGSFSSGRT*GRLHPR Trigger: CCGAGGATGCAGACGACCTCATGTTCGACCTGAGCT...GAAGCTACCTGAGGCAGTGCGCTGGGGGACTACGTAAGTGTCCCGTAGCACTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGCGCTCCCGCGCCCAGTaGCTGCTCGCAGGCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQTSKQKGFPAIPLPNLERSRAQ*LLAGAV Trigger: CACAGCGCCTGCGAGCAGCCACTGGGCGCGGGAGCG...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR TCA 90 bp | GCACACAACGCCCACGCCCACGTTACCATTTTAAGATACTGTCAATGCTCAGTTGCTGCTGCCGCTGGATaGGGAGGTGGACACGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHNAHAHVTILRYCQCSVAAAAG*GGGHAA Trigger: CGCTGCGTGTCCACCTCCTCATCCAGCGGCAGCAGC...AACTGAGCATTGACAGTATCTTAAAATGGTAACGTGGGCGTGGGCGTTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR GCA 90 bp | ACAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACCATCCTCGGCGCCGCTaGCGCTGCTGCTGCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVHSNKGVTEQMGTTDTHHPRRR*RCCCRW Trigger: CCAGCGGCAGCAGCAGCGGCAGCGGCGCCGAGGATG...GTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR GCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGCGTCCCGGGGCAGGTTaGTCTCGGCTTCCGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSKQKGFPAIPLPNLERPGAG*SRLPSS Trigger: AGAGCTCGGAAGCCGAGAGCAACCTGCCCCGGGACG...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGCGCTGGATGAGGAGGTaGACACGCAGCGGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TQTSKQKGFPAIPLPNLERWMRR*TRSGRT Trigger: CGTCCTCCCGCTGCGTGTCCACCTCCTCATCCAGCG...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR TCA 90 bp | CAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACACCGGGCTGCACGCCATaGACTCGCCCTCCTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSIQTRVLQNKWEQLIPTPGCTP*TRPPRC Trigger: ACACCGAGGAGGGCGAGTTCATGGCGTGCAGCCCGG...TGTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CCA 90 bp | ACTCAGACTTCTAAACAAAAGGGCTTTCCAGCTATTCCTCTCCCAAACCTGGAGTCGGGGAACTCGAAGTaGGAACCCAGGCTGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TQTSKQKGFPAIPLPNLESGNSK*EPRLPS Trigger: CGAGGGCAGCCTGGGTTCCCACTTCGAGTTCCCCGA...CTCCAGGTTTGGGAGAGGAATAGCTGGAAAGCCCTTTTGTTTAGAAGTCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | ACTGCTCATCAGGAGGCACACCTCAGCTCCTACCTATaGCTCTTTGTGGCTGTGGTGAACTGTGTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TAHQEAHLSSYL*LFVAVVNCVCQ Trigger: TTGACAAACACAGTTCACCACAGCCACAAAGAGCAATAGGTAGGAGCTGAGGTGTGCCTCCTGATGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | AAACCCAAAAACCCCGGCGGTGACTTCGACAGTGCATaGAGTCTGCTTCGCCACCATTTGCTACTAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: KPKNPGGDFDSA*SLLRHHLLLNM Trigger: CATATTTAGTAGCAAATGGTGGCGAAGCAGACTCAATGCACTGTCGAAGTCACCGCCGGGGTTTTTGGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | GGAGCTGGGTATTTGTTCTTTTGCTTAAAGTTGACATaGGTCTTACCAGGGGCCCAGAAGTGGGTGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGYLFFCLKLT*VLPGAQKWVCE Trigger: CTCACACACCCACTTCTGGGCCCCTGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR GCA 90 bp | CTGGTCTTAAGTCAGTTCACAGTTATGATTTTTGTAAGCGTTTGTACAGACTGCGCGGGCGGAGGCTGCTaGTTGGTGATGTTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLSQFTVMIFVSVCTDCAGGGC*LVMFLK Trigger: CTTCAAGAACATCACCAAGCAGCAGCCTCCGCCCGC...GCAGTCTGTACAAACGCTTACAAAAATCATAACTGTGAACTGACTTAAGACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CCA 90 bp | GAAATGGGATCGAGGGCCCTTTGTCAATATCCATTTGATCAAAATTCTTTTTACGCTGGGCTTGGCCGCTaGGTCCGTCTTGGGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EMGSRALCQYPFDQNSFYAGLGR*VRLGLF Trigger: AAAAAGCCCAAGACGGACCCAGCGGCCAAGCCCAGC...GTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | ACACATGGAGCTGGGTATTTGTTCTTTTGCTTAAAGTaGACATTGGTCTTACCAGGGGCCCAGAAGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: THGAGYLFFCLK*TLVLPGAQKWV Trigger: CACCCACTTCTGGGCCCCTGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | GAGCTGTCCAACACATGGAGCTGGGTATTTGTTCTTTaGCTTAAAGTTGACATTGGTCTTACCAGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSNTWSWVFVL*LKVDIGLTRGP Trigger: TGGGCCCCTGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGTTGGACAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | AAACCAGAGAGCTGTCCAACACATGGAGCTGGGTATTaGTTCTTTTGCTTAAAGTTGACATTGGTCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: KPESCPTHGAGY*FFCLKLTLVLP Trigger: TGGTAAGACCAATGTCAACTTTAAGCAAAAGAACAAATACCCAGCTCCATGTGTTGGACAGCTCTCTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| 3UTR CAA 72 bp | GAGAAATGGGATCGAGGGCCCTTTGTCAATATCCATTaGATCAAAATTCTTTTTACGCTATGTCTTGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: EKWDRGPFVNIH*IKILFTLCLDY Trigger: ATAATCAAGACATAGCGTAAAAAGAATTTTGATCAAATGGATATTGACAAAGGGCCCTCGATCCCATTTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS GCA 90 bp | CGCAGGCGCCTTGAGCTTGGCGCACTTCTTGCCGGGGCCCTTGGCTaGCTTGGCGCCCGCCGCGCTCTTGTCGGGGCTCTGGCCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRLELGALLAGALG*LGARRALVGALARA Trigger: AGCGCGGGCCAGAGCCCCGACAAGAGCGCGGCGGGCGCCAAGGCAGCCAAGGGCCCCGGCAAGAAGTGCGCCAAGCTCAAGGCGCCTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 90 bp | CTGCCTTGGCGCCCGCCGCGCTCTTGTCGGGGCTCTGGCCCGCGCTaGGCTTGGCCGCTGGGTCCGTCTTGGGCTTTTTGCGCGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPWRPPRSCRGSGPR*AWPLGPSWAFCAAG Trigger: ACCGGCCGCGCAAAAAGCCCAAGACGGACCCAGCGGCCAAGCCCAGCGCGGGCCAGAGCCCCGACAAGAGCGCGGCGGGCGCCAAGGCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CAA 90 bp | GAGCGCGCGCGCGCGCGCGCAGCGATGCCGCCCGCGGATGGGGGTGGAGATTTAGCGTCCCGGGGCAGGTaGCTCTCGGCTTCCGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERARARAAMPPADGGGDLASRGR*LSASEL Trigger: GAGCTCGGAAGCCGAGAGCAACCTGCCCCGGGACGC...TAAATCTCCACCCCCATCCGCGGGCGGCATCGCTGCGCGCGCGCGCGCGCGCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS GCA 90 bp | CGTCGTCTTCATCGTCGTCGTCCAGGAAGACGCACTTGGCTGCCTTaGCCGCGGCGCAGTCCCCCGGCTGCGCCGCCTTGCCCGCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRLHRRRPGRRTWLP*PRRSPPAAPPCPRP Trigger: CGGGCGCGGGCAAGGCGGCGCAGCCGGGGGACTGCGCCGCGGGCAAGGCAGCCAAGTGCGTCTTCCTGGACGACGACGATGAAGACGACG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 90 bp | GGGCCCTTGGCTGCCTTGGCGCCCGCCGCGCTCTTGTCGGGGCTCTaGCCCGCGCTGGGCTTGGCCGCTGGGTCCGTCTTGGGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLAALAPAALLSGL*PALGLAAGSVLGFL Trigger: CAAAAAGCCCAAGACGGACCCAGCGGCCAAGCCCAGCGCGGGCCAGAGCCCCGACAAGAGCGCGGCGGGCGCCAAGGCAGCCAAGGGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTCGGTCGCGTGCGTCGCGGCCCTGGGGAGTTGGGCTTGCGCGCGGGAGCGTTCATGGGCCGTTaGATGTGGCCCGACGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLGRVRRGPGELGLRAGAFMGR*MWPDAV Trigger: GACGGCGTCGGGCCACATCAAACGGCCCATGAACGC...TCCCGCGCGCAAGCCCAACTCCCCAGGGCCGCGACGCACGCGACCGAGGAGCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS TCA 90 bp | ACCAGTCCGGGTCGCTCTCGTCCAGGGCCACCGGGCTGCACGCCATaGACTCGCCCTCCTCGGTGTCCAGCGCGTCCCGGGGCAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPGRSRPGPPGCTP*TRPPRCPARPGAGC Trigger: GCAACCTGCCCCGGGACGCGCTGGACACCGAGGAGGGCGAGTTCATGGCGTGCAGCCCGGTGGCCCTGGACGAGAGCGACCCGGACTGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS GCA 90 bp | TTCGTCGTCGTCTTCATCGTCGTCGTCCAGGAAGACGCACTTGGCTaGCTTGCCCGCGGCGCAGTCCCCCGGCTGCGCCGCCTTGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FVVVFIVVVQEDALG*LARGAVPRLRRLAR Trigger: GCGGGCAAGGCGGCGCAGCCGGGGGACTGCGCCGCGGGCAAGGCAGCCAAGTGCGTCTTCCTGGACGACGACGATGAAGACGACGACGAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS GCA 90 bp | AGGTTCCCCGCCGCTCCCGCGCCCAGTGGCTGCTCGCAGGCGCTGTaGGCGCCCTGGGAGAAATTCAAGCTCAGGTCGAACATGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFPAAPAPSGCSQAL*APWEKFKLRSNMRS Trigger: CGACCTCATGTTCGACCTGAGCTTGAATTTCTCCCAGGGCGCGCACAGCGCCTGCGAGCAGCCACTGGGCGCGGGAGCGGCGGGGAACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTGAGAACGCACTTGGCTGCCTaGCCCGCGGCGCAGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPEGPSPAQAVGPGWMLRTHLAA*PAAQSP Trigger: GGGGGACTGCGCCGCGGGCAAGGCAGCCAAGTGCGT...TCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS TCA 90 bp | AGGCGCTGTGCGCGCCCTGGGAGAAATTCAAGCTCAGGTCGAACATaGGGTCGTCTGCATCCTCGGCGCCGCTGCCGCTGCTGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRCARPGRNSSSGRT*GRLHPRRRCRCCCR Trigger: GCGGCAGCAGCAGCGGCAGCGGCGCCGAGGATGCAGACGACCTCATGTTCGACCTGAGCTTGAATTTCTCCCAGGGCGCGCACAGCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 90 bp | GCCGCTCCCGCGCCCAGTGGCTGCTCGCAGGCGCTGTGCGCGCCCTaGGAGAAATTCAAGCTCAGGTCGAACATGAGGTCGTCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AAPAPSGCSQALCAP*EKFKLRSNMRSSAS Trigger: GGATGCAGACGACCTCATGTTCGACCTGAGCTTGAATTTCTCCCAGGGCGCGCACAGCGCCTGCGAGCAGCCACTGGGCGCGGGAGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGAGGGCCCCAGTCCTGCCCAAGCTGTGGGTCCTGGTTGGATGCTGAGAGGCGGAGGCTGCTGCTaGGTGATGTTCTTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPEGPSPAQAVGPGWMLRGGGCC*VMFLKL Trigger: CAGCTTCAAGAACATCACCAAGCAGCAGCCTCCGCC...TCTCAGCATCCAACCAGGACCCACAGCTTGGGCAGGACTGGGGCCCTCAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCATTCAAACAAGGGTGTTACAGAACAAATGGGAACAACTGATACCCACTGGCCCGACGCCGTCTaGCACCAGTCCGGGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TVHSNKGVTEQMGTTDTHWPDAV*HQSGSL Trigger: GAGCGACCCGGACTGGTGCAAGACGGCGTCGGGCCA...GTGGGTATCAGTTGTTCCCATTTGTTCTGTAACACCCTTGTTTGAATGGACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTTAAGTCAGTTCACAGTTATGATTTTTGTAAGCGTTTGTACAGACTGCTTGCCCGCGCCCGCCTaGCCCGCAGGCGCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLSQFTVMIFVSVCTDCLPAPA*PAGALS Trigger: GCTCAAGGCGCCTGCGGGCAAGGCGGGCGCGGGCAA...GCAGTCTGTACAAACGCTTACAAAAATCATAACTGTGAACTGACTTAAGACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS-3UTR CAA 90 bp | AGAAACACGTCAAGAATCGTTACATGGAGACGTTTACTTTGGGGACTTATGAATCAGCAGCTGAGGGGGTaGCTGCTGCGTCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RNTSRIVTWRRLLWGLMNQQLRG*LLRRRR Trigger: CCGCCGCCGACGCAGCAGCAACCCCCTCAGCTGCTG...ATTCATAAGTCCCCAAAGTAAACGTCTCCATGTAACGATTCTTGACGTGTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 90 bp | GGCGCCTTGAGCTTGGCGCACTTCTTGCCGGGGCCCTTGGCTGCCTaGGCGCCCGCCGCGCTCTTGTCGGGGCTCTGGCCCGCGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GALSLAHFLPGPLAA*APAALLSGLWPALG Trigger: GCCCAGCGCGGGCCAGAGCCCCGACAAGAGCGCGGCGGGCGCCAAGGCAGCCAAGGGCCCCGGCAAGAAGTGCGCCAAGCTCAAGGCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 90 bp | CCCGCGCCCGCCTTGCCCGCAGGCGCCTTGAGCTTGGCGCACTTCTaGCCGGGGCCCTTGGCTGCCTTGGCGCCCGCCGCGCTCTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PAPALPAGALSLAHF*PGPLAALAPAALLS Trigger: CGACAAGAGCGCGGCGGGCGCCAAGGCAGCCAAGGGCCCCGGCAAGAAGTGCGCCAAGCTCAAGGCGCCTGCGGGCAAGGCGGGCGCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 72 bp | GCTGCCTTGGCGCCCGCCGCGCTCTTGTCGGGGCTCTaGCCCGCGCTGGGCTTGGCCGCTGGGTCCGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AALAPAALLSGL*PALGLAAGSVL Trigger: CAAGACGGACCCAGCGGCCAAGCCCAGCGCGGGCCAGAGCCCCGACAAGAGCGCGGCGGGCGCCAAGGCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 72 bp | CGCCGCTGCCGCTGCTGCTGCCGCTGGATGAGGAGGTaGACACGCAGCGGGAGGACGCGGGCGACAGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRCRCCCRWMRR*TRSGRTRATAR Trigger: CCGCGCTGTCGCCCGCGTCCTCCCGCTGCGTGTCCACCTCCTCATCCAGCGGCAGCAGCAGCGGCAGCGGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 72 bp | GCCTTGCCCGCAGGCGCCTTGAGCTTGGCGCACTTCTaGCCGGGGCCCTTGGCTGCCTTGGCGCCCGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ALPAGALSLAHF*PGPLAALAPAA Trigger: CGCGGCGGGCGCCAAGGCAGCCAAGGGCCCCGGCAAGAAGTGCGCCAAGCTCAAGGCGCCTGCGGGCAAGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS TCA 72 bp | GGTCGCTCTCGTCCAGGGCCACCGGGCTGCACGCCATaGACTCGCCCTCCTCGGTGTCCAGCGCGTCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRSRPGPPGCTP*TRPPRCPARPG Trigger: CCCGGGACGCGCTGGACACCGAGGAGGGCGAGTTCATGGCGTGCAGCCCGGTGGCCCTGGACGAGAGCGACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 72 bp | CCGCGCTCTTGTCGGGGCTCTGGCCCGCGCTGGGCTTaGCCGCTGGGTCCGTCTTGGGCTTTTTGCGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRSCRGSGPRWA*PLGPSWAFCAA Trigger: GGCCGCGCAAAAAGCCCAAGACGGACCCAGCGGCCAAGCCCAGCGCGGGCCAGAGCCCCGACAAGAGCGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 72 bp | CGCCCGCCGCGCTCTTGTCGGGGCTCTGGCCCGCGCTaGGCTTGGCCGCTGGGTCCGTCTTGGGCTTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPRSCRGSGPR*AWPLGPSWAFC Trigger: GCAAAAAGCCCAAGACGGACCCAGCGGCCAAGCCCAGCGCGGGCCAGAGCCCCGACAAGAGCGCGGCGGGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 72 bp | GCCGCGCTCTTGTCGGGGCTCTGGCCCGCGCTGGGCTaGGCCGCTGGGTCCGTCTTGGGCTTTTTGCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AALLSGLWPALG*AAGSVLGFLRG Trigger: GCCGCGCAAAAAGCCCAAGACGGACCCAGCGGCCAAGCCCAGCGCGGGCCAGAGCCCCGACAAGAGCGCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 90 bp | TTGCCCGCAGGCGCCTTGAGCTTGGCGCACTTCTTGCCGGGGCCCTaGGCTGCCTTGGCGCCCGCCGCGCTCTTGTCGGGGCTCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPAGALSLAHFLPGP*AALAPAALLSGLWP Trigger: GGGCCAGAGCCCCGACAAGAGCGCGGCGGGCGCCAAGGCAGCCAAGGGCCCCGGCAAGAAGTGCGCCAAGCTCAAGGCGCCTGCGGGCAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 90 bp | TCGTCGTCTTCATCGTCGTCGTCCAGGAAGACGCACTTGGCTGCCTaGCCCGCGGCGCAGTCCCCCGGCTGCGCCGCCTTGCCCGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSSRKTHLAA*PAAQSPGCAALPAP Trigger: GGGCGCGGGCAAGGCGGCGCAGCCGGGGGACTGCGCCGCGGGCAAGGCAGCCAAGTGCGTCTTCCTGGACGACGACGATGAAGACGACGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS GCA 72 bp | CGCCCTCCTCGGTGTCCAGCGCGTCCCGGGGCAGGTTaGTCTCGGCTTCCGAGCTCTCGGCCTGCTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RPPRCPARPGAG*SRLPSSRPAAP Trigger: TGGTGCAGCAGGCCGAGAGCTCGGAAGCCGAGAGCAACCTGCCCCGGGACGCGCTGGACACCGAGGAGGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 72 bp | TCGCCCTCCTCGGTGTCCAGCGCGTCCCGGGGCAGGTaGCTCTCGGCTTCCGAGCTCTCGGCCTGCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSVSSASRGR*LSASELSACCT Trigger: GGTGCAGCAGGCCGAGAGCTCGGAAGCCGAGAGCAACCTGCCCCGGGACGCGCTGGACACCGAGGAGGGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CAA 72 bp | TCATCGTCGTCGTCCAGGAAGACGCACTTGGCTGCCTaGCCCGCGGCGCAGTCCCCCGGCTGCGCCGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSRKTHLAA*PAAQSPGCAAL Trigger: CAAGGCGGCGCAGCCGGGGGACTGCGCCGCGGGCAAGGCAGCCAAGTGCGTCTTCCTGGACGACGACGATGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS CCA 72 bp | GCGCCCAGTGGCTGCTCGCAGGCGCTGTGCGCGCCCTaGGAGAAATTCAAGCTCAGGTCGAACATGAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: APSGCSQALCAP*EKFKLRSNMRS Trigger: CGACCTCATGTTCGACCTGAGCTTGAATTTCTCCCAGGGCGCGCACAGCGCCTGCGAGCAGCCACTGGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||
| CDS TCA 72 bp | CGGGGAACTCGAAGTGGGAACCCAGGCTGCCCTCGCTaGAGGAATCCAGGTCCTTATCCACCAGCGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGTRSGNPGCPR*RNPGPYPPATG Trigger: CCCTGTCGCTGGTGGATAAGGACCTGGATTCCTTCAGCGAGGGCAGCCTGGGTTCCCACTTCGAGTTCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079063.7 |
||