Pregenerated sensors for SOWAHC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098188Ensembl transcript IDs: ENSMUST00000182161.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCCGATCCAGAAGTCACTACTTTCAGGTAGGCTGGCTGGCCACTaGGCTCTGAGGCTCTGCCTGTCTCAGTTCCTCATGTTAGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: SPIQKSLLSGRLAGH*ALRLCLSQFLMLGY Trigger: GTAACCTAACATGAGGAACTGAGACAGGCAGAGCCTCAGAGCCCAGTGGCCAGCCAGCCTACCTGAAAGTAGTGACTTCTGGATCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 90 bp | CATACCCTATTAGATGGATGCTGGGGATTCAGTCACAGATCCTCATaGTTGCAGAACAAGTGCTCTGACCTACTGAGCCACAACTTATAT | + |
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Preference number: 1 (lower is better) Translates to: HTLLDGCWGFSHRSS*LQNKCSDLLSHNLY Trigger: ATATAAGTTGTGGCTCAGTAGGTCAGAGCACTTGTTCTGCAAGCATGAGGATCTGTGACTGAATCCCCAGCATCCATCTAATAGGGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CCA 90 bp | CTCTGCCCTCTATGTTGTAGGCCAGAAAGACTAGAGAGAAGGATTTaGTCAAACCAGTCTCCCACAGAAGTTTCTACTCTTGTTATAAGA | + |
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Preference number: 1 (lower is better) Translates to: LCPLCCRPERLERRI*SNQSPTEVSTLVIR Trigger: TCTTATAACAAGAGTAGAAACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCTACAACATAGAGGGCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 90 bp | TCAGTGCATTATGAATCACTTCAGAGACATTTTCTTGCCTCAGAATaGTATCCTGAAAGGATTATTACAGATCCACCCCAAGCCCGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SVHYESLQRHFLASE*YPERIITDPPQARK Trigger: CTTTCGGGCTTGGGGTGGATCTGTAATAATCCTTTCAGGATAGCATTCTGAGGCAAGAAAATGTCTCTGAAGTGATTCATAATGCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 90 bp | GCAGCCTCTAGTTTCATTCACTTACAAACATTAGCAGGTTCAGTTTaGAATACCATGTGTTTTGCATTTTCTCATGGCCCTTACTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: AASSFIHLQTLAGSV*NTMCFAFSHGPYFA Trigger: TGCAAAGTAAGGGCCATGAGAAAATGCAAAACACATGGTATTGCAAACTGAACCTGCTAATGTTTGTAAGTGAATGAAACTAGAGGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 90 bp | TCACTTACAAACATTAGCAGGTTCAGTTTGCAATACCATGTGTTTTaGATTTTCTCATGGCCCTTACTTTGCATGGTATCTCGCAATGAT | + |
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Preference number: 1 (lower is better) Translates to: SLTNISRFSLQYHVF*IFSWPLLCMVSRND Trigger: ATCATTGCGAGATACCATGCAAAGTAAGGGCCATGAGAAAATGCAAAACACATGGTATTGCAAACTGAACCTGCTAATGTTTGTAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR CCA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACATTACCTGGGTGGGGTTaGGGAAGAGGCACAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: VISGIPISVHIILLCSFTLPGWG*GRGTNQ Trigger: CTGATTTGTGCCTCTTCCCCAACCCCACCCAGGTAA...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CAA 90 bp | ACCCTATTAGATGGATGCTGGGGATTCAGTCACAGATCCTCATGCTaGCAGAACAAGTGCTCTGACCTACTGAGCCACAACTTATATATT | + |
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Preference number: 2 (lower is better) Translates to: TLLDGCWGFSHRSSC*QNKCSDLLSHNLYI Trigger: AATATATAAGTTGTGGCTCAGTAGGTCAGAGCACTTGTTCTGCAAGCATGAGGATCTGTGACTGAATCCCCAGCATCCATCTAATAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGAAAGACTAGAGAGAAGGATTTGGTCAAACCAGTCTCCCACAGAAGTTCTCAGAATGCTATCCTaGAAGGATTATTACAGATCC | + |
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Preference number: 2 (lower is better) Translates to: RPERLERRIWSNQSPTEVLRMLS*KDYYRS Trigger: GGATCTGTAATAATCCTTTCAGGATAGCATTCTGAG...AACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR TCA 90 bp | AGATGTGACAAATTTGTTAGAAATCTCTATGACTTGGGGAGGCCAGTTAACAACTTCACATTTCAACTCTaGCCTTGCCCTTCTTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: RCDKFVRNLYDLGRPVNNFTFQL*PCPSLA Trigger: TGCTAAAGAAGGGCAAGGTCAGAGTTGAAATGTGAA...GTTGTTAACTGGCCTCCCCAAGTCATAGAGATTTCTAACAAATTTGTCACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR GCA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTACTTGAAAGCAAGTGCTaGTTCCTTCTTCAGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SIASSIEIQKWPHFSSFLLESKC*FLLQFS Trigger: ACTGAACTGAAGAAGGAAGCAGCACTTGCTTTCAAG...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGATACAACGCATACCCTATTAGATaGATGCTGGGGATTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SLVNRCLYLSIAIIERYNAYPIR*MLGIQS Trigger: TGACTGAATCCCCAGCATCCATCTAATAGGGTATGC...GTTGTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CAA 90 bp | CGTACCTGGAGGACACATAAACTTGTTTTGAAACTACACAGTCTCTaGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RTWRTHKLVLKLHSL*STDACIYLLPLLRD Trigger: ATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGACTGTGTAGTTTCAAAACAAGTTTATGTGTCCTCCAGGTACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CAA 90 bp | GACATTCATAGTTTCAAGCGTACCTGGAGGACACATAAACTTGTTTaGAAACTACACAGTCTCTTGTCAACAGATGCCTGTATTTATCTA | + |
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Preference number: 2 (lower is better) Translates to: DIHSFKRTWRTHKLV*KLHSLLSTDACIYL Trigger: TAGATAAATACAGGCATCTGTTGACAAGAGACTGTGTAGTTTCAAAACAAGTTTATGTGTCCTCCAGGTACGCTTGAAACTATGAATGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR TCA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTACATGGTATCTCGCAATaGTTAAAAAGCAAATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SIASSIEIQKWPHFSSFLHGISQ*LKSKWD Trigger: GTCCCATTTGCTTTTTAATCATTGCGAGATACCATG...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGTGACAAATTTGTTAGAAATCTCTATGACTTGGGGAGGCCAGTTAACAACCAATACCATGTGTTTTaGATTTTCTCATGGCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: RCDKFVRNLYDLGRPVNNQYHVF*IFSWPL Trigger: TAAGGGCCATGAGAAAATGCAAAACACATGGTATTG...GTTGTTAACTGGCCTCCCCAAGTCATAGAGATTTCTAACAAATTTGTCACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CAA 90 bp | ATGTACCGTATAGTGTTATATAGGCACAAACCAGATTACAGTAACTaGAAAGCAAGTGCTGCTTCCTTCTTCAGTTCAGTGATTAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: MYRIVLYRHKPDYSN*KASAASFFSSVIKS Trigger: ACTTTTAATCACTGAACTGAAGAAGGAAGCAGCACTTGCTTTCAAGTTACTGTAATCTGGTTTGTGCCTATATAACACTATACGGTACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGATACAACTTTTGCATTTTCTCATaGCCCTTACTTTGCATGGTA | + |
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Preference number: 2 (lower is better) Translates to: SLVNRCLYLSIAIIERYNFCIFS*PLLCMV Trigger: TACCATGCAAAGTAAGGGCCATGAGAAAATGCAAAA...GTTGTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CCA 72 bp | CAGAAGTCACTACTTTCAGGTAGGCTGGCTGGCCACTaGGCTCTGAGGCTCTGCCTGTCTCAGTTCCTCATG | + |
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Preference number: 3 (lower is better) Translates to: QKSLLSGRLAGH*ALRLCLSQFLM Trigger: CATGAGGAACTGAGACAGGCAGAGCCTCAGAGCCCAGTGGCCAGCCAGCCTACCTGAAAGTAGTGACTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR TCA 72 bp | TGTGAGCTCTGTATAACCACGCAGTCCCCTCGACTCTaGGGACTTGGCTGCTTACTCTGCCCTCTATGTTGT | + |
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Preference number: 3 (lower is better) Translates to: CELCITTQSPRL*GLGCLLCPLCC Trigger: ACAACATAGAGGGCAGAGTAAGCAGCCAAGTCCTCAGAGTCGAGGGGACTGCGTGGTTATACAGAGCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 72 bp | TTAGATGGATGCTGGGGATTCAGTCACAGATCCTCATaGTTGCAGAACAAGTGCTCTGACCTACTGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LDGCWGFSHRSS*LQNKCSDLLSH Trigger: GTGGCTCAGTAGGTCAGAGCACTTGTTCTGCAAGCATGAGGATCTGTGACTGAATCCCCAGCATCCATCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR TCA 72 bp | TGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTTaGGATAGCCTCCCCGATCCAGAAGTCACTACTTTC | + |
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Preference number: 3 (lower is better) Translates to: CQVTSLMPFLLP*DSLPDPEVTTF Trigger: GAAAGTAGTGACTTCTGGATCGGGGAGGCTATCTCAAGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CCA 72 bp | ATAATTCCAGTTCTCACAAGTTCCAGGTTACCTGGGTaGGGTTGGGGAAGAGGCACAAATCAGTGCATTATG | + |
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Preference number: 3 (lower is better) Translates to: IIPVLTSSRLPG*GWGRGTNQCIM Trigger: CATAATGCACTGATTTGTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTGAGAACTGGAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 72 bp | TGTGTTTGTATGAGTACAGGTGTGCAGACACCATGGTaGACATGGGGAAGCTGGAGGACAATTTTTAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: CVCMSTGVQTPW*TWGSWRTIFKS Trigger: ACTCTTAAAAATTGTCCTCCAGCTTCCCCATGTGCACCATGGTGTCTGCACACCTGTACTCATACAAACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CCA 72 bp | GTTACTCATACCCTCAGCTATGCATACCCTATTAGATaGATGCTGGGGATTCAGTCACAGATCCTCATGCTT | + |
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Preference number: 3 (lower is better) Translates to: VTHTLSYAYPIR*MLGIQSQILML Trigger: AAGCATGAGGATCTGTGACTGAATCCCCAGCATCCATCTAATAGGGTATGCATAGCTGAGGGTATGAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR TCA 72 bp | CAGTCACAGATCCTCATGCTTGCAGAACAAGTGCTCTaGCCTACTGAGCCACAACTTATATATTTCATGAGC | + |
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Preference number: 3 (lower is better) Translates to: QSQILMLAEQVL*PTEPQLIYFMS Trigger: GCTCATGAAATATATAAGTTGTGGCTCAGTAGGTCAGAGCACTTGTTCTGCAAGCATGAGGATCTGTGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR TCA 72 bp | ACTTCAGAGACATTTTCTTGCCTCAGAATGCTATCCTaGAAGGATTATTACAGATCCACCCCAAGCCCGAAA | + |
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Preference number: 3 (lower is better) Translates to: TSETFSCLRMLS*KDYYRSTPSPK Trigger: TTTCGGGCTTGGGGTGGATCTGTAATAATCCTTTCAGGATAGCATTCTGAGGCAAGAAAATGTCTCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CCA 72 bp | GAACCGCTACTTACAATACAAGTAAGACGTTATCAGTaGGATTCCCATCTCCGTTCACATAATCCTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: EPLLTIQVRRYQ*DSHLRSHNPPL Trigger: CAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAACGTCTTACTTGTATTGTAAGTAGCGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR CAA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACAGCAATACCATGTGTTTaGCATTTTCTCATGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: VISGIPISVHIILLCSFTAIPCV*HFLMAL Trigger: AAGGGCCATGAGAAAATGCAAAACACATGGTATTGC...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR TCA 72 bp | GTTTCAAGCGTACCTGGAGGACACATAAACTTGTTTTaGAACTACACAGTCTCTTGTCAACAGATGCCTGTA | + |
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Preference number: 3 (lower is better) Translates to: VSSVPGGHINLF*NYTVSCQQMPV Trigger: TACAGGCATCTGTTGACAAGAGACTGTGTAGTTTCAAAACAAGTTTATGTGTCCTCCAGGTACGCTTGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAATTGGGAACCGCTACTTACAATACAAGTAAGACGTTATCAGTGGGATTCCATTTCAACTCTGACCTaGCCCTTCTTTAGCACCTTA | + |
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Preference number: 3 (lower is better) Translates to: KNWEPLLTIQVRRYQWDSISTLT*PFFSTL Trigger: TAAGGTGCTAAAGAAGGGCAAGGTCAGAGTTGAAAT...GGAATCCCACTGATAACGTCTTACTTGTATTGTAAGTAGCGGTTCCCAATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR CAA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTATTCAGAGACATTTTCTaGCCTCAGAATGCTATCCTG | + |
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Preference number: 3 (lower is better) Translates to: SIASSIEIQKWPHFSSFLFRDIF*PQNAIL Trigger: CAGGATAGCATTCTGAGGCAAGAAAATGTCTCTGAA...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR-3UTR CAA 90 bp | AGATGTGACAAATTTGTTAGAAATCTCTATGACTTGGGGAGGCCAGTTAACAACATTAGCAGGTTCAGTTaGCAATACCATGTGTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: RCDKFVRNLYDLGRPVNNISRFS*QYHVFC Trigger: GCAAAACACATGGTATTGCAAACTGAACCTGCTAAT...GTTGTTAACTGGCCTCCCCAAGTCATAGAGATTTCTAACAAATTTGTCACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 72 bp | TATGAATCACTTCAGAGACATTTTCTTGCCTCAGAATaGTATCCTGAAAGGATTATTACAGATCCACCCCAA | + |
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Preference number: 3 (lower is better) Translates to: YESLQRHFLASE*YPERIITDPPQ Trigger: TTGGGGTGGATCTGTAATAATCCTTTCAGGATAGCATTCTGAGGCAAGAAAATGTCTCTGAAGTGATTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR TCA 72 bp | TTCCACTTCTTATCCATACCCAGTATTATTCTACCTTaGAGACAAATAAGCCTTAGCATTTCTAGCGCGAAT | + |
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Preference number: 3 (lower is better) Translates to: FHFLSIPSIILP*RQISLSISSAN Trigger: ATTCGCGCTAGAAATGCTAAGGCTTATTTGTCTTCAAGGTAGAATAATACTGGGTATGGATAAGAAGTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR TCA 72 bp | GGAATGGTGTTAAGTAGCTTAAAATGTCATATTTACTaGATAAGCTACATTATGACAAGGAATGCCCGGAGT | + |
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Preference number: 3 (lower is better) Translates to: GMVLSSLKCHIY*ISYIMTRNARS Trigger: ACTCCGGGCATTCCTTGTCATAATGTAGCTTATTCAGTAAATATGACATTTTAAGCTACTTAACACCATTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 72 bp | TCATATTTACTGAATAAGCTACATTATGACAAGGAATaGCCGGAGTTCCTTTCGGGGCTTTTGAAATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SYLLNKLHYDKE*PEFLSGLLKFK Trigger: TTTAAATTTCAAAAGCCCCGAAAGGAACTCCGGGCATTCCTTGTCATAATGTAGCTTATTCAGTAAATATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR GCA 72 bp | ACTTGTTTTGAAACTACACAGTCTCTTGTCAACAGATaGCTGTATTTATCTATTGCCATTATTGAGAGATAC | + |
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Preference number: 3 (lower is better) Translates to: TCFETTQSLVNR*LYLSIAIIERY Trigger: GTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGACTGTGTAGTTTCAAAACAAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | CACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACAAATCAGTGCATGAGAGCATCCAGGCGTaGTCCAGGGGATCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HKFQVTWVGLGKRHKSVHESIQA*SRGSRV Trigger: TACCCTGGATCCCCTGGATCACGCCTGGATGCTCTC...ATGCACTGATTTGTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR GCA 90 bp | AATTCCAGTTCTCACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACCTAGGCTGTCCCACTTaGCCTCGGAAGCTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NSSSHKFQVTWVGLGKRHLGCPT*PRKLRA Trigger: TGCTCTCAGCTTCCGAGGGCAAGTGGGACAGCCTAG...GTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTGAGAACTGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | AATTCCAGTTCTCACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACTCCCGCTGTAGTCCCTaGTGTCTACATCTGCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: NSSSHKFQVTWVGLGKRHSRCSP*CLHLRR Trigger: ACGACGCAGATGTAGACATCAGGGACTACAGCGGGA...GTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTGAGAACTGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTCCTTGGGCCCCACCTTaGGCAGGGGCTGGAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LKIEVECQVTSLMPFLLPPWAPP*AGAGGS Trigger: AGAGCCTCCAGCCCCTGCTCAAGGTGGGGCCCAAGG...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CCA 90 bp | AATTCCAGTTCTCACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACTCCGAGAGACAACTGTaGATTTGCCTCCTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSSSHKFQVTWVGLGKRHSERQL*ICLLEL Trigger: CAGCTCCAGGAGGCAAATCCACAGTTGTCTCTCGGA...GTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTGAGAACTGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | AATTCCAGTTCTCACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACCGAGGCTTTGCGACCTaGATCTTTTGCTTTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NSSSHKFQVTWVGLGKRHRGFAT*IFCFAS Trigger: GGAAGCAAAGCAAAAGATTCAGGTCGCAAAGCCTCG...GTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTGAGAACTGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | AGGCCAGAAAGACTAGAGAGAAGGATTTGGTCAAACCAGTCTCCCACAGAAGTTCTTCATCCGTCCACTTaGGCTGCCCGAGGCTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: RPERLERRIWSNQSPTEVLHPST*AARGFA Trigger: CGCAAAGCCTCGGGCAGCTCAAGTGGACGGATGAAG...AACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR GCA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTCCAGGAGCTCTTGCCTaGCGTGCTTGGCGGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LKIEVECQVTSLMPFLLPPGALA*RAWRPS Trigger: ACTGGGCCGCCAAGCACGGCAGGCAAGAGCTCCTGG...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR GCA 90 bp | AATTCCAGTTCTCACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACACCTCTACATGCCCATaGATCGCTGCCAAATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: NSSSHKFQVTWVGLGKRHTSTCP*IAAKCR Trigger: CCTACATTTGGCAGCGATGCATGGGCATGTAGAGGT...GTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTGAGAACTGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTGGCCGGGCTCACAAGTaGGCAGCCCTTCTAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKIEVECQVTSLMPFLLPGRAHK*AALLGC Trigger: ACAGCCTAGAAGGGCTGCTCACTTGTGAGCCCGGCC...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR GCA 90 bp | AGATGTGACAAATTTGTTAGAAATCTCTATGACTTGGGGAGGCCAGTTAACAACCGCCCCCTCCTCTGCTaGGACCTCCAGCGTTACCGT | + |
|
Preference number: 4 (lower is better) Translates to: RCDKFVRNLYDLGRPVNNRPLLC*DLQRYR Trigger: ACGGTAACGCTGGAGGTCGCAGCAGAGGAGGGGGCG...GTTGTTAACTGGCCTCCCCAAGTCATAGAGATTTCTAACAAATTTGTCACATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTTCCGTCCACTTGAGCTaGCCGAGGCTTTGCGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKIEVECQVTSLMPFLLPSVHLS*PRLCDL Trigger: CAGGTCGCAAAGCCTCGGGCAGCTCAAGTGGACGGA...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR GCA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACAACGCTCCTCTTTAGTTaGGGGGAGCTGCCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: VISGIPISVHIILLCSFTTLLFS*GELPNT Trigger: GGTGTTGGGCAGCTCCCCGCAACTAAAGAGGAGCGT...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTAGCAAGGTCCGGGACTTaGGGCTCCTCAGTCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SIASSIEIQKWPHFSSFLARSGT*GSSVTS Trigger: CGAGGTGACTGAGGAGCCTCAAGTCCCGGACCTTGC...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTCGCTCGACTTGGCATTaGTGTTCACTGGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKIEVECQVTSLMPFLLPRSTWH*CSLAAG Trigger: ACCAGCTGCCAGTGAACATCAATGCCAAGTCGAGCG...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGAAAGACTAGAGAGAAGGATTTGGTCAAACCAGTCTCCCACAGAAGTTAAGGAGGGAGTGGTGTaGATGATCTGGGTTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPERLERRIWSNQSPTEVKEGVV*MIWVRN Trigger: ATTCCGAACCCAGATCATTCACACCACTCCCTCCTT...AACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CCA 90 bp | TACAGTAACTTGAAAGCAAGTGCTGCTTCCTTCTTCAGTTCAGTGATTAAAAGTTTTGCCTCCTGGAGCTaGCTGCCCTCGCAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSNLKASAASFFSSVIKSFASWS*LPSQGS Trigger: GGAGCCTTGCGAGGGCAGCCAGCTCCAGGAGGCAAA...ACTTTTAATCACTGAACTGAAGAAGGAAGCAGCACTTGCTTTCAAGTTACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR TCA 90 bp | AAAAATTGGGAACCGCTACTTACAATACAAGTAAGACGTTATCAGTGGGATTCCCTCTCGCTCAGATACTaGGAGGCCTTTCTCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNWEPLLTIQVRRYQWDSLSLRY*EAFLPL Trigger: CAGCGGGAGAAAGGCCTCTCAGTATCTGAGCGAGAG...GGAATCCCACTGATAACGTCTTACTTGTATTGTAAGTAGCGGTTCCCAATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CCA 90 bp | TACAGTAACTTGAAAGCAAGTGCTGCTTCCTTCTTCAGTTCAGTGATTAAAAGTTGCTTGGCGGCCCAGTaGAGACAAGTGAAGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSNLKASAASFFSSVIKSCLAAQ*RQVKPV Trigger: CACCGGCTTCACTTGTCTCCACTGGGCCGCCAAGCA...ACTTTTAATCACTGAACTGAAGAAGGAAGCAGCACTTGCTTTCAAGTTACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGATACAACCTTGCCTGCCGTGCTTaGCGGCCCAGTGGAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVNRCLYLSIAIIERYNLACRA*RPSGDK Trigger: CTTGTCTCCACTGGGCCGCCAAGCACGGCAGGCAAG...GTTGTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR GCA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACATTCACCACCTCTACATaGCCATGCATCGCTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VISGIPISVHIILLCSFTFTTST*PCIAAK Trigger: TTTGGCAGCGATGCATGGGCATGTAGAGGTGGTGAA...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR GCA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACAAGCTGCCCGAGGCTTTaGGACCTGAATCTTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VISGIPISVHIILLCSFTSCPRL*DLNLLL Trigger: AAGCAAAAGATTCAGGTCGCAAAGCCTCGGGCAGCT...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGATACAACACCGGGGAGAGTTTGTaGGTGATGTGTGAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVNRCLYLSIAIIERYNTGESL*VMCEGS Trigger: GCTCCCCTCACACATCACTCACAAACTCTCCCCGGT...GTTGTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR GCA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTAAGACAACTGTGGATTTaGCTCCTGGAGCTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIASSIEIQKWPHFSSFLRQLWI*LLELAA Trigger: GGCAGCCAGCTCCAGGAGGCAAATCCACAGTTGTCT...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CCA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTATGTTCACTGGCAGCTaGTGTTTGGTGGCAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKIEVECQVTSLMPFLLPMFTGS*CLVAKL Trigger: CAACTTTGCCACCAAACACCAGCTGCCAGTGAACAT...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGAAAGACTAGAGAGAAGGATTTGGTCAAACCAGTCTCCCACAGAAGTTTACAGAACCTTTTCTTaGGATGCACATACTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RPERLERRIWSNQSPTEVYRTFS*DAHTWY Trigger: GTACCAAGTATGTGCATCTCAAGAAAAGGTTCTGTA...AACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | TACAGTAACTTGAAAGCAAGTGCTGCTTCCTTCTTCAGTTCAGTGATTAAAAGTGTTTGGTGGCAAAGTTaGCCAACATGGCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSNLKASAASFFSSVIKSVWWQS*PTWPGA Trigger: AGCTCCTGGCCATGTTGGTCAACTTTGCCACCAAAC...ACTTTTAATCACTGAACTGAAGAAGGAAGCAGCACTTGCTTTCAAGTTACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CCA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTATTCAGCCTCCCCCTGTaGAGGGAGTTTAAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIASSIEIQKWPHFSSFLFSLPL*REFKVL Trigger: GAGAACCTTAAACTCCCTCCACAGGGGGAGGCTGAA...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGATACAACGGCATTGATGTTCACTaGCAGCTGGTGTTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVNRCLYLSIAIIERYNGIDVH*QLVFGG Trigger: GCCACCAAACACCAGCTGCCAGTGAACATCAATGCC...GTTGTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CAA 72 bp | AGTTTCAAGCGTACCTGGAGGACACATAAACTTGTTTaGAAACTACACAGTCTCTTGTCAACAGATGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFKRTWRTHKLV*KLHSLLSTDAC Trigger: ACAGGCATCTGTTGACAAGAGACTGTGTAGTTTCAAAACAAGTTTATGTGTCCTCCAGGTACGCTTGAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR GCA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTACTGAATCTTTTGCTTTaGTTCCTCCAGTCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIASSIEIQKWPHFSSFLLNLLL*FLQSIP Trigger: AGGGATGGACTGGAGGAAGCAAAGCAAAAGATTCAG...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGATACAACCAGTTTAAAGGAAGATaGGTAGCCTCTAAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVNRCLYLSIAIIERYNQFKGR*VASKRP Trigger: AGGTCTCTTAGAGGCTACTCATCTTCCTTTAAACTG...GTTGTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| 3UTR CAA 72 bp | AATCAGTGCATTATGAATCACTTCAGAGACATTTTCTaGCCTCAGAATGCTATCCTGAAAGGATTATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: NQCIMNHFRDIF*PQNAILKGLLQ Trigger: CTGTAATAATCCTTTCAGGATAGCATTCTGAGGCAAGAAAATGTCTCTGAAGTGATTCATAATGCACTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| 3UTR CAA 72 bp | AGGACACATAAACTTGTTTTGAAACTACACAGTCTCTaGTCAACAGATGCCTGTATTTATCTATTGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RTHKLVLKLHSL*STDACIYLLPL Trigger: TAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGACTGTGTAGTTTCAAAACAAGTTTATGTGTCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 90 bp | CGCGGGCGCGGGTGCGCTGTTCGCGCTGGCCACCCAGGACGTCCCTaGAGTGTTGCACCAATTCCGAGTGTCCCGCCCGGCCCCCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRGCAVRAGHPGRP*SVAPIPSVPPGPHA Trigger: AGCGTGGGGGCCGGGCGGGACACTCGGAATTGGTGCAACACTTCAGGGACGTCCTGGGTGGCCAGCGCGAACAGCGCACCCGCGCCCGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 90 bp | CGGGTGCGCTGTTCGCGCTGGCCACCCAGGACGTCCCTGAAGTGTTaGACCAATTCCGAGTGTCCCGCCCGGCCCCCACGCTCGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVRCSRWPPRTSLKC*TNSECPARPPRSAR Trigger: CCTCGCCGAGCGTGGGGGCCGGGCGGGACACTCGGAATTGGTGCAACACTTCAGGGACGTCCTGGGTGGCCAGCGCGAACAGCGCACCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CCA 90 bp | GGACCCGGGACCCGACGCCCAGGACACGGCCTCGACCTCCTGTGGTaGCGAGTCCTTACCTTGGGCCCCACCTTGAGCAGGGGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGTRRPGHGLDLLW*RVLTLGPTLSRGWR Trigger: CCTCCAGCCCCTGCTCAAGGTGGGGCCCAAGGTAAGGACTCGCCACCACAGGAGGTCGAGGCCGTGTCCTGGGCGTCGGGTCCCGGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 90 bp | TGGAGCTGGCTGCCCTCGCAAGGCTCCGCTGCAAGGTCCGGGACTTaGGGCTCCTCAGTCACCTCGATACGCGGGGGCTCTCGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WSWLPSQGSAARSGT*GSSVTSIRGGSRGS Trigger: GCTCCCCCGAGAGCCCCCGCGTATCGAGGTGACTGAGGAGCCTCAAGTCCCGGACCTTGCAGCGGAGCCTTGCGAGGGCAGCCAGCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 90 bp | TCTAGGCTGTCCCACTTGCCCTCGGAAGCTGAGAGCATCCAGGCGTaGTCCAGGGGATCCAGGGTAACCGAGGCCCCGACGCTGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRLSHLPSEAESIQA*SRGSRVTEAPTLLS Trigger: GGAGAGCAGCGTCGGGGCCTCGGTTACCCTGGATCCCCTGGATCACGCCTGGATGCTCTCAGCTTCCGAGGGCAAGTGGGACAGCCTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 90 bp | CGGACGAAGAAGCTAACGATGCGGTATCGGAGTCGCCCCCTCCTCTaGTGCGACCTCCAGCGTTACCGTCCCCAGGACCCACGCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTKKLTMRYRSRPLL*CDLQRYRPQDPRSS Trigger: AGAGGAGCGTGGGTCCTGGGGACGGTAACGCTGGAGGTCGCAGCAGAGGAGGGGGCGACTCCGATACCGCATCGTTAGCTTCTTCGTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CCA 90 bp | AGGCTCTTGGTCGCTCACTTCGCCACCCAGTCCGAGAGACAACTGTaGATTTGCCTCCTGGAGCTGGCTGCCCTCGCAAGGCTCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLVAHFATQSERQL*ICLLELAALARLRC Trigger: GCAGCGGAGCCTTGCGAGGGCAGCCAGCTCCAGGAGGCAAATCCACAGTTGTCTCTCGGACTGGGTGGCGAAGTGAGCGACCAAGAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 90 bp | TTGGTCGCTCACTTCGCCACCCAGTCCGAGAGACAACTGTGGATTTaGCTCCTGGAGCTGGCTGCCCTCGCAAGGCTCCGCTGCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVAHFATQSERQLWI*LLELAALARLRCKV Trigger: GACCTTGCAGCGGAGCCTTGCGAGGGCAGCCAGCTCCAGGAGGCAAATCCACAGTTGTCTCTCGGACTGGGTGGCGAAGTGAGCGACCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 90 bp | GGTGAAGTTCAGCTCCGTCTTCCACGACCGGGGAGAGTTTGTGAGTaGTGTGTGAGGGGAGCACCTTTGAAAGTCTCCAGCGCCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GEVQLRLPRPGRVCE*CVRGAPLKVSSAHP Trigger: GGGGTGGGCGCTGGAGACTTTCAAAGGTGCTCCCCTCACACATCACTCACAAACTCTCCCCGGTCGTGGAAGACGGAGCTGAACTTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | AATTCCAGTTCTCACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACACGGTGGCCACGGCATaGACCAGTTCCTTGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSSHKFQVTWVGLGKRHTVATA*TSSLKR Trigger: GCGCTTCAAGGAACTGGTCAATGCCGTGGCCACCGT...GTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTGAGAACTGGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | CACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACAAATCAGTGCATGTGAGGGGAGCACCTTaGAAAGTCTCCAGCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HKFQVTWVGLGKRHKSVHVRGAP*KVSSAH Trigger: GTGGGCGCTGGAGACTTTCAAAGGTGCTCCCCTCAC...ATGCACTGATTTGTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | AGGCCAGAAAGACTAGAGAGAAGGATTTGGTCAAACCAGTCTCCCACAGAAGTTACCTTGGGCCCCACCTaGAGCAGGGGCTGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPERLERRIWSNQSPTEVTLGPT*SRGWRL Trigger: GAGCCTCCAGCCCCTGCTCAAGGTGGGGCCCAAGGT...AACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 90 bp | TGCTCTCGCTCAGATACTGAGAGGCCTTTCTCCCGCTGTAGTCCCTaGTGTCTACATCTGCGTCGTAGGCCCCCACTAGTAACTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CSRSDTERPFSRCSP*CLHLRRRPPLVTSP Trigger: TGGTGAAGTTACTAGTGGGGGCCTACGACGCAGATGTAGACATCAGGGACTACAGCGGGAGAAAGGCCTCTCAGTATCTGAGCGAGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGAAAGACTAGAGAGAAGGATTTGGTCAAACCAGTCTCCCACAGAAGTTAGGGGCTGGAGGCTCTaGGTCGCTCACTTCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RPERLERRIWSNQSPTEVRGWRL*VAHFAT Trigger: GGTGGCGAAGTGAGCGACCAAGAGCCTCCAGCCCCT...AACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | CACAAGTTCCAGGTTACCTGGGTGGGGTTGGGGAAGAGGCACAAATCAGTGCATGAGCTGCCCGAGGCTTaGCGACCTGAATCTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HKFQVTWVGLGKRHKSVHELPEA*RPESFA Trigger: AGCAAAAGATTCAGGTCGCAAAGCCTCGGGCAGCTC...ATGCACTGATTTGTGCCTCTTCCCCAACCCCACCCAGGTAACCTGGAACTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | AGGCCAGAAAGACTAGAGAGAAGGATTTGGTCAAACCAGTCTCCCACAGAAGTTTCTAGGCTGTCCCACTaGCCCTCGGAAGCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPERLERRIWSNQSPTEVSRLSH*PSEAES Trigger: GCTCTCAGCTTCCGAGGGCAAGTGGGACAGCCTAGA...AACTTCTGTGGGAGACTGGTTTGACCAAATCCTTCTCTCTAGTCTTTCTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | TACAGTAACTTGAAAGCAAGTGCTGCTTCCTTCTTCAGTTCAGTGATTAAAAGTCATGGCCAGGAGCTCTaGCCTGCCGTGCTTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: YSNLKASAASFFSSVIKSHGQEL*PAVLGG Trigger: GCCGCCAAGCACGGCAGGCAAGAGCTCCTGGCCATG...ACTTTTAATCACTGAACTGAAGAAGGAAGCAGCACTTGCTTTCAAGTTACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACAGCTTCATCCGTCCACTaGAGCTGCCCGAGGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VISGIPISVHIILLCSFTASSVH*SCPRLC Trigger: GCAAAGCCTCGGGCAGCTCAAGTGGACGGATGAAGC...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATTGGGAACCGCTACTTACAATACAAGTAAGACGTTATCAGTGGGATTCCTCTTGCCTGCCGTGCTaGGCGGCCCAGTGGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: KNWEPLLTIQVRRYQWDSSCLPC*AAQWRQ Trigger: TTGTCTCCACTGGGCCGCCAAGCACGGCAGGCAAGA...GGAATCCCACTGATAACGTCTTACTTGTATTGTAAGTAGCGGTTCCCAATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | AGATGTGACAAATTTGTTAGAAATCTCTATGACTTGGGGAGGCCAGTTAACAACTGCAAGGTCCGGGACTaGAGGCTCCTCAGTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCDKFVRNLYDLGRPVNNCKVRD*RLLSHL Trigger: GAGGTGACTGAGGAGCCTCAAGTCCCGGACCTTGCA...GTTGTTAACTGGCCTCCCCAAGTCATAGAGATTTCTAACAAATTTGTCACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | AGATGTGACAAATTTGTTAGAAATCTCTATGACTTGGGGAGGCCAGTTAACAACGAGACAACTGTGGATTaGCCTCCTGGAGCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCDKFVRNLYDLGRPVNNETTVD*PPGAGC Trigger: GCAGCCAGCTCCAGGAGGCAAATCCACAGTTGTCTC...GTTGTTAACTGGCCTCCCCAAGTCATAGAGATTTCTAACAAATTTGTCACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTTGTCAACAGATGCCTGTATTTATCTATTGCCATTATTGAGAGATACAACTGGCGAGTCCTTACCTaGGGCCCCACCTTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLVNRCLYLSIAIIERYNWRVLT*GPTLSR Trigger: CCTGCTCAAGGTGGGGCCCAAGGTAAGGACTCGCCA...GTTGTATCTCTCAATAATGGCAATAGATAAATACAGGCATCTGTTGACAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACATGTTTGGTGGCAAAGTaGACCAACATGGCCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VISGIPISVHIILLCSFTCLVAK*TNMARS Trigger: GCTCCTGGCCATGTTGGTCAACTTTGCCACCAAACA...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTACTGGCAGCTGGTGTTaGGTGGCAAAGTTGACCAAC | + |
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Preference number: 5 (lower is better) Translates to: LKIEVECQVTSLMPFLLPTGSWC*VAKLTN Trigger: GTTGGTCAACTTTGCCACCAAACACCAGCTGCCAGT...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | AGATGTGACAAATTTGTTAGAAATCTCTATGACTTGGGGAGGCCAGTTAACAACGACGTCCCTGAAGTGTaGCACCAATTCCGAGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RCDKFVRNLYDLGRPVNNDVPEV*HQFRVS Trigger: GGACACTCGGAATTGGTGCAACACTTCAGGGACGTC...GTTGTTAACTGGCCTCCCCAAGTCATAGAGATTTCTAACAAATTTGTCACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | GTTATCAGTGGGATTCCCATCTCCGTTCACATAATCCTCCTTTGTAGTTTCACACCTGAATCTTTTGCTTaGCTTCCTCCAGTCCATCCC | + |
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Preference number: 5 (lower is better) Translates to: VISGIPISVHIILLCSFTPESFA*LPPVHP Trigger: GGGATGGACTGGAGGAAGCAAAGCAAAAGATTCAGG...TGTGAAACTACAAAGGAGGATTATGTGAACGGAGATGGGAATCCCACTGATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | CTGAAGATAGAAGTAGAATGTCAGGTGACTTCCTTGATGCCTTTCTTACTGCCTTGCGACCTGAATCTTTaGCTTTGCTTCCTCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LKIEVECQVTSLMPFLLPCDLNL*LCFLQS Trigger: GGACTGGAGGAAGCAAAGCAAAAGATTCAGGTCGCA...AGGCAGTAAGAAAGGCATCAAGGAAGTCACCTGACATTCTACTTCTATCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | TACAGTAACTTGAAAGCAAGTGCTGCTTCCTTCTTCAGTTCAGTGATTAAAAGTCGGAATCGGATTTTGTaGAGTCGTGGCTTCATCCGT | + |
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Preference number: 5 (lower is better) Translates to: YSNLKASAASFFSSVIKSRNRIL*SRGFIR Trigger: ACGGATGAAGCCACGACTCAACAAAATCCGATTCCG...ACTTTTAATCACTGAACTGAAGAAGGAAGCAGCACTTGCTTTCAAGTTACTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS-3UTR CAA 90 bp | TCAATAGCTAGCAGCATTGAAATACAGAAATGGCCCCATTTCTCTTCCTTTTTAGTTCGGAATCGGATTTaGTTGAGTCGTGGCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SIASSIEIQKWPHFSSFLVRNRI*LSRGFI Trigger: GATGAAGCCACGACTCAACAAAATCCGATTCCGAAC...TAAAAAGGAAGAGAAATGGGGCCATTTCTGTATTTCAATGCTGCTAGCTATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 72 bp | TCGGTGCGCACGGTGGCCACGGCATTGACCAGTTCCTaGAAGCGCTCGCGGGCGCGGGTGCGCTGTTCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SVRTVATALTSS*KRSRARVRCSR Trigger: GCGCGAACAGCGCACCCGCGCCCGCGAGCGCTTCAAGGAACTGGTCAATGCCGTGGCCACCGTGCGCACCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 72 bp | CCATCCGCGGGATCGGTGCGCACGGTGGCCACGGCATaGACCAGTTCCTTGAAGCGCTCGCGGGCGCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PSAGSVRTVATA*TSSLKRSRARV Trigger: CACCCGCGCCCGCGAGCGCTTCAAGGAACTGGTCAATGCCGTGGCCACCGTGCGCACCGATCCCGCGGATGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 90 bp | CTGGAGCTGGCTGCCCTCGCAAGGCTCCGCTGCAAGGTCCGGGACTaGAGGCTCCTCAGTCACCTCGATACGCGGGGGCTCTCGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LELAALARLRCKVRD*RLLSHLDTRGLSGE Trigger: CTCCCCCGAGAGCCCCCGCGTATCGAGGTGACTGAGGAGCCTCAAGTCCCGGACCTTGCAGCGGAGCCTTGCGAGGGCAGCCAGCTCCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 72 bp | TGTTCGCGCTGGCCACCCAGGACGTCCCTGAAGTGTTaGACCAATTCCGAGTGTCCCGCCCGGCCCCCACGC | + |
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Preference number: 6 (lower is better) Translates to: CSRWPPRTSLKC*TNSECPARPPR Trigger: GCGTGGGGGCCGGGCGGGACACTCGGAATTGGTGCAACACTTCAGGGACGTCCTGGGTGGCCAGCGCGAACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CCA 72 bp | ACCCGACGCCCAGGACACGGCCTCGACCTCCTGTGGTaGCGAGTCCTTACCTTGGGCCCCACCTTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TRRPGHGLDLLW*RVLTLGPTLSR Trigger: CCTGCTCAAGGTGGGGCCCAAGGTAAGGACTCGCCACCACAGGAGGTCGAGGCCGTGTCCTGGGCGTCGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 72 bp | CTGTTCGCGCTGGCCACCCAGGACGTCCCTGAAGTGTaGCACCAATTCCGAGTGTCCCGCCCGGCCCCCACG | + |
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Preference number: 6 (lower is better) Translates to: LFALATQDVPEV*HQFRVSRPAPT Trigger: CGTGGGGGCCGGGCGGGACACTCGGAATTGGTGCAACACTTCAGGGACGTCCTGGGTGGCCAGCGCGAACAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 90 bp | TACTTGGTACCATCCGCGGGATCGGTGCGCACGGTGGCCACGGCATaGACCAGTTCCTTGAAGCGCTCGCGGGCGCGGGTGCGCTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: YLVPSAGSVRTVATA*TSSLKRSRARVRCS Trigger: CGAACAGCGCACCCGCGCCCGCGAGCGCTTCAAGGAACTGGTCAATGCCGTGGCCACCGTGCGCACCGATCCCGCGGATGGTACCAAGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 72 bp | CTGCCCTCGCAAGGCTCCGCTGCAAGGTCCGGGACTTaGGGCTCCTCAGTCACCTCGATACGCGGGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPSQGSAARSGT*GSSVTSIRGGS Trigger: AGAGCCCCCGCGTATCGAGGTGACTGAGGAGCCTCAAGTCCCGGACCTTGCAGCGGAGCCTTGCGAGGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 72 bp | CACGGCCTCGACCTCCTGTGGTGGCGAGTCCTTACCTaGGGCCCCACCTTGAGCAGGGGCTGGAGGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: HGLDLLWWRVLT*GPTLSRGWRLL Trigger: CAAGAGCCTCCAGCCCCTGCTCAAGGTGGGGCCCAAGGTAAGGACTCGCCACCACAGGAGGTCGAGGCCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 72 bp | TCCCACTTGCCCTCGGAAGCTGAGAGCATCCAGGCGTaGTCCAGGGGATCCAGGGTAACCGAGGCCCCGACG | + |
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Preference number: 6 (lower is better) Translates to: SHLPSEAESIQA*SRGSRVTEAPT Trigger: CGTCGGGGCCTCGGTTACCCTGGATCCCCTGGATCACGCCTGGATGCTCTCAGCTTCCGAGGGCAAGTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 72 bp | CCCCAGGACCCACGCTCCTCTTTAGTTGCGGGGAGCTaGCCAACACCAGGTCCCGAAAGTTCTGACGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PQDPRSSLVAGS*PTPGPESSDGP Trigger: CGGCCCGTCAGAACTTTCGGGACCTGGTGTTGGGCAGCTCCCCGCAACTAAAGAGGAGCGTGGGTCCTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 72 bp | CACTTCGCCACCCAGTCCGAGAGACAACTGTGGATTTaGCTCCTGGAGCTGGCTGCCCTCGCAAGGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: HFATQSERQLWI*LLELAALARLR Trigger: GCGGAGCCTTGCGAGGGCAGCCAGCTCCAGGAGGCAAATCCACAGTTGTCTCTCGGACTGGGTGGCGAAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CCA 72 bp | CCACCCAGTCCGAGAGACAACTGTGGATTTGCCTCCTaGAGCTGGCTGCCCTCGCAAGGCTCCGCTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PPSPRDNCGFAS*SWLPSQGSAAR Trigger: CCTTGCAGCGGAGCCTTGCGAGGGCAGCCAGCTCCAGGAGGCAAATCCACAGTTGTCTCTCGGACTGGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 72 bp | ACCTTGGGCCCCACCTTGAGCAGGGGCTGGAGGCTCTaGGTCGCTCACTTCGCCACCCAGTCCGAGAGACAA | + |
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Preference number: 6 (lower is better) Translates to: TLGPTLSRGWRL*VAHFATQSERQ Trigger: TTGTCTCTCGGACTGGGTGGCGAAGTGAGCGACCAAGAGCCTCCAGCCCCTGCTCAAGGTGGGGCCCAAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 72 bp | CGAGAGACAACTGTGGATTTGCCTCCTGGAGCTGGCTaGCCTCGCAAGGCTCCGCTGCAAGGTCCGGGACTT | + |
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Preference number: 6 (lower is better) Translates to: RETTVDLPPGAG*PRKAPLQGPGL Trigger: AAGTCCCGGACCTTGCAGCGGAGCCTTGCGAGGGCAGCCAGCTCCAGGAGGCAAATCCACAGTTGTCTCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS GCA 72 bp | GCGTTACCGTCCCCAGGACCCACGCTCCTCTTTAGTTaGGGGGAGCTGCCCAACACCAGGTCCCGAAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ALPSPGPTLLFS*GELPNTRSRKF Trigger: GAACTTTCGGGACCTGGTGTTGGGCAGCTCCCCGCAACTAAAGAGGAGCGTGGGTCCTGGGGACGGTAACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 72 bp | CGTGGCTTCATCCGTCCACTTGAGCTGCCCGAGGCTTaGCGACCTGAATCTTTTGCTTTGCTTCCTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RGFIRPLELPEA*RPESFALLPPV Trigger: GACTGGAGGAAGCAAAGCAAAAGATTCAGGTCGCAAAGCCTCGGGCAGCTCAAGTGGACGGATGAAGCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CAA 90 bp | TTGTTGAGTCGTGGCTTCATCCGTCCACTTGAGCTGCCCGAGGCTTaGCGACCTGAATCTTTTGCTTTGCTTCCTCCAGTCCATCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLSRGFIRPLELPEA*RPESFALLPPVHPS Trigger: CGAGGGATGGACTGGAGGAAGCAAAGCAAAAGATTCAGGTCGCAAAGCCTCGGGCAGCTCAAGTGGACGGATGAAGCCACGACTCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS TCA 72 bp | TCAGATACTGAGAGGCCTTTCTCCCGCTGTAGTCCCTaGTGTCTACATCTGCGTCGTAGGCCCCCACTAGTA | + |
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Preference number: 6 (lower is better) Translates to: SDTERPFSRCSP*CLHLRRRPPLV Trigger: TACTAGTGGGGGCCTACGACGCAGATGTAGACATCAGGGACTACAGCGGGAGAAAGGCCTCTCAGTATCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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| CDS CCA 72 bp | AGTGTAGCCTCCGCTCGACTTGGCATTGATGTTCACTaGCAGCTGGTGTTTGGTGGCAAAGTTGACCAACAT | + |
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Preference number: 6 (lower is better) Translates to: SVASARLGIDVH*QLVFGGKVDQH Trigger: ATGTTGGTCAACTTTGCCACCAAACACCAGCTGCCAGTGAACATCAATGCCAAGTCGAGCGGAGGCTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182161.2 |
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