Pregenerated sensors for SOWAHB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045314Ensembl transcript IDs: ENSMUST00000061328.6
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | TGGCACTGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTaGCTGGCTCAGGAGAGAGAGGAACCCTTCGCAGGCTTGAGTGCC | + |
Preference number: 1 (lower is better) Translates to: WHCLRKYCAFLCPDP*LAQEREEPFAGLSA Trigger: GGCACTCAAGCCTGCGAAGGGTTCCTCTCTCTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCAGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR GCA 90 bp | CCCTTTGACGCGTCCTTTCCCTTTCTAGTAAGGCCTGGCTGGCACTaGCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTG | + |
Preference number: 1 (lower is better) Translates to: PFDASFPFLVRPGWH*LRKYCAFLCPDPWL Trigger: CAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCAGTGCCAGCCAGGCCTTACTAGAAAGGGAAAGGACGCGTCAAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 90 bp | TTGCCTCCCTTTGACGCGTCCTTTCCCTTTCTAGTAAGGCCTGGCTaGCACTGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCC | + |
Preference number: 1 (lower is better) Translates to: LPPFDASFPFLVRPG*HCLRKYCAFLCPDP Trigger: GGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCAGTGCCAGCCAGGCCTTACTAGAAAGGGAAAGGACGCGTCAAAGGGAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR TCA 90 bp | ACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTaGGAACCGAACGGGACACTTCCTGTTAGACATTCAGTACTTCAG | + |
Preference number: 1 (lower is better) Translates to: TESPSARDLQGLASS*EPNGTLPVRHSVLQ Trigger: CTGAAGTACTGAATGTCTAACAGGAAGTGTCCCGTTCGGTTCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 90 bp | AACAGTTTCTGTTTCCCTTGGGTTCTCTCCACCTACTTAGTAGCTTaGGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
Preference number: 1 (lower is better) Translates to: NSFCFPWVLSTYLVA*GVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACTCCCCAAGCTACTAAGTAGGTGGAGAGAACCCAAGGGAAACAGAAACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 90 bp | TTTCCAGCCCTCTTTGGATTTACATTCAGAATTTACACATTCTCCTaGGGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGC | + |
Preference number: 1 (lower is better) Translates to: FPALFGFTFRIYTFS*GHRVTFSQGPARIS Trigger: GCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCCCAGGAGAATGTGTAAATTCTGAATGTAAATCCAAAGAGGGCTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR TCA 90 bp | TTTACACCAAGCACTGTAGACGATGCTCGCAGGAAGGTGCAGGACTaGGGAAATCTCTTCAGTCAGATGTTACACTCTCCAGCAACAATT | + |
Preference number: 1 (lower is better) Translates to: FTPSTVDDARRKVQD*GNLFSQMLHSPATI Trigger: AATTGTTGCTGGAGAGTGTAACATCTGACTGAAGAGATTTCCTCAGTCCTGCACCTTCCTGCGAGCATCGTCTACAGTGCTTGGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR GCA 90 bp | CCCTGCAGGATGAAGAGTTTCAGTCATAACACAGATGAACTAAAATaGGTTTCCTCTTGGAAAGCTCACTTTGAGTTGGTACAAAAACAA | + |
Preference number: 1 (lower is better) Translates to: PCRMKSFSHNTDELK*VSSWKAHFELVQKQ Trigger: TTGTTTTTGTACCAACTCAAAGTGAGCTTTCCAAGAGGAAACGCATTTTAGTTCATCTGTGTTATGACTGAAACTCTTCATCCTGCAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 90 bp | AAGAGTTTCAGTCATAACACAGATGAACTAAAATGCGTTTCCTCTTaGAAAGCTCACTTTGAGTTGGTACAAAAACAAACAACAGCAAAA | + |
Preference number: 1 (lower is better) Translates to: KSFSHNTDELKCVSS*KAHFELVQKQTTAK Trigger: TTTTGCTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTTTCCAAGAGGAAACGCATTTTAGTTCATCTGTGTTATGACTGAAACTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR GCA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGAGTGTGTGCGCGCGCATaGGTGCGCCTCTTGGAGAAA | + |
Preference number: 2 (lower is better) Translates to: GHRVTFSQGPARISLFLRVCARA*VRLLEK Trigger: TTTCTCCAAGAGGCGCACGCATGCGCGCGCACACAC...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | TGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTGGCTCAGGAGAGTTTCTGTTTCCCTTaGGTTCTCTCCACCTACTTA | + |
Preference number: 2 (lower is better) Translates to: CLRKYCAFLCPDPWLAQESFCFP*VLSTYL Trigger: TAAGTAGGTGGAGAGAACCCAAGGGAAACAGAAACT...CTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | TTCTCCTGGGGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCCATCTGACTTCAAACTaGTGCTTTCCACTCAGCCAA | + |
Preference number: 2 (lower is better) Translates to: FSWGHRVTFSQGPARISLHLTSN*CFPLSQ Trigger: TTGGCTGAGTGGAAAGCACCAGTTTGAAGTCAGATG...GAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCCCAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR TCA 90 bp | TGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTGGCTCAGGAGTTCAAGAAATTGAGATaGCCCTTGAGGACACCATTT | + |
Preference number: 2 (lower is better) Translates to: CLRKYCAFLCPDPWLAQEFKKLR*PLRTPF Trigger: AAATGGTGTCCTCAAGGGTCATCTCAATTTCTTGAA...CTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR GCA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGATTCACTGGCTGGACTTaGCAAAAGGCACATAAAGAA | + |
Preference number: 2 (lower is better) Translates to: GHRVTFSQGPARISLFLRFTGWT*QKAHKE Trigger: TTCTTTATGTGCCTTTTGGCAAGTCCAGCCAGTGAA...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCCTGTGCCCTGACCCCTaGCTGGCTCAGGAGAGAGAG | + |
Preference number: 2 (lower is better) Translates to: LYLAASQSSDAFNTYCFPLCPDP*LAQERE Trigger: CTCTCTCTCCTGAGCCAGCCAGGGGTCAGGGCACAG...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGATTTTATTTCACTGGCTaGACTTGCCAAAAGGCACAT | + |
Preference number: 2 (lower is better) Translates to: GHRVTFSQGPARISLFLRFYFTG*TCQKAH Trigger: ATGTGCCTTTTGGCAAGTCCAGCCAGTGAAATAAAA...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGAACAATTTTATTTCACTaGCTGGACTTGCCAAAAGGC | + |
Preference number: 2 (lower is better) Translates to: GHRVTFSQGPARISLFLRTILFH*LDLPKG Trigger: GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGT...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR GCA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCGGCACTTCCATGAATTaGCTCCCTTTGACGCGTCCT | + |
Preference number: 2 (lower is better) Translates to: MLHSPATILFHWLDLPKGGTSMN*LPLTRP Trigger: AGGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCC...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGAAAGCTCACTTTGAGTTaGTACAAAAACAAACAACAG | + |
Preference number: 2 (lower is better) Translates to: GHRVTFSQGPARISLFLRKLTLS*YKNKQQ Trigger: CTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTT...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGTGCCTGGATCAGCTTTaGTCCACATTTCACAGTCCA | + |
Preference number: 2 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKCLDQL*STFHSP Trigger: TGGACTGTGAAATGTGGACCAAAGCTGATCCAGGCA...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CCA 90 bp | GGAAAGCTCACTTTGAGTTGGTACAAAAACAAACAACAGCAAAAACAAACAGAAACCTACTTAGTAGCTTaGGGAGTGTGTGTGTGTGTG | + |
Preference number: 2 (lower is better) Translates to: GKLTLSWYKNKQQQKQTETYLVA*GVCVCV Trigger: CACACACACACACACTCCCCAAGCTACTAAGTAGGT...TTCTGTTTGTTTTTGCTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 72 bp | CTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTaGCTGGCTCAGGAGAGAGAGGAACCCTTCGCAGGC | + |
Preference number: 3 (lower is better) Translates to: LRKYCAFLCPDP*LAQEREEPFAG Trigger: GCCTGCGAAGGGTTCCTCTCTCTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR TCA 72 bp | GGCTGGCTCAGGAGAGAGAGGAACCCTTCGCAGGCTTaGGTGCCTGGATCAGCTTTGGTCCACATTTCACAG | + |
Preference number: 3 (lower is better) Translates to: GWLRRERNPSQA*VPGSALVHISQ Trigger: CTGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTCTCCTGAGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR GCA 72 bp | GGCTCAGGAGAGAGAGGAACCCTTCGCAGGCTTGAGTaGCTGGATCAGCTTTGGTCCACATTTCACAGTCCA | + |
Preference number: 3 (lower is better) Translates to: GSGERGTLRRLE*LDQLWSTFHSP Trigger: TGGACTGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTCTCCTGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR GCA 72 bp | GCGTCCTTTCCCTTTCTAGTAAGGCCTGGCTGGCACTaGCTCAGAAAATACTGTGCCTTCCTGTGCCCTGAC | + |
Preference number: 3 (lower is better) Translates to: ASFPFLVRPGWH*LRKYCAFLCPD Trigger: GTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCAGTGCCAGCCAGGCCTTACTAGAAAGGGAAAGGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 72 bp | TTTGACGCGTCCTTTCCCTTTCTAGTAAGGCCTGGCTaGCACTGCCTCAGAAAATACTGTGCCTTCCTGTGC | + |
Preference number: 3 (lower is better) Translates to: FDASFPFLVRPG*HCLRKYCAFLC Trigger: GCACAGGAAGGCACAGTATTTTCTGAGGCAGTGCCAGCCAGGCCTTACTAGAAAGGGAAAGGACGCGTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CAA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGACAGTTTCTGTTTCCCTaGGGTTCTCTCCACCTACTT | + |
Preference number: 3 (lower is better) Translates to: GHRVTFSQGPARISLFLRQFLFP*GSLHLL Trigger: AAGTAGGTGGAGAGAACCCAAGGGAAACAGAAACTG...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR TCA 72 bp | ACTTTGATCTTCAGACATGTGGAACGCTGTCAGAGATaGCCCTGCTTGCTACACATGGAGTTTCCCCCTGCA | + |
Preference number: 3 (lower is better) Translates to: TLIFRHVERCQR*PCLLHMEFPPA Trigger: TGCAGGGGGAAACTCCATGTGTAGCAAGCAGGGTCATCTCTGACAGCGTTCCACATGTCTGAAGATCAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 72 bp | TGTTTCCCTTGGGTTCTCTCCACCTACTTAGTAGCTTaGGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
Preference number: 3 (lower is better) Translates to: CFPWVLSTYLVA*GVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACTCCCCAAGCTACTAAGTAGGTGGAGAGAACCCAAGGGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CAA 90 bp | CAAACAGAAAACAAAACCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCGGCACTTCCATGAATaGCCTCCCTTTGACGCGTCC | + |
Preference number: 3 (lower is better) Translates to: QTENKTESECYHLSREWSRHFHE*PPFDAS Trigger: GGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCCG...ACTCCACTCCCTAGACAAATGATAACACTCAGACTCGGTTTTGTTTTCTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CAA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCGTGCCTGGATCAGCTTaGGTCCACATTTCACAGTCC | + |
Preference number: 3 (lower is better) Translates to: MLHSPATILFHWLDLPKGVPGSA*VHISQS Trigger: GGACTGTGAAATGTGGACCAAAGCTGATCCAGGCAC...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 72 bp | CTCTTTGGATTTACATTCAGAATTTACACATTCTCCTaGGGTCACAGAGTCACCTTCAGCCAGGGACCTGCA | + |
Preference number: 3 (lower is better) Translates to: LFGFTFRIYTFS*GHRVTFSQGPA Trigger: TGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCCCAGGAGAATGTGTAAATTCTGAATGTAAATCCAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR TCA 72 bp | TATCATTTGTCTAGGGAGTGGAGTCACAATCATTCCTaGATGTCACTCATCTGCTTCTCCGGTCAATGGCAA | + |
Preference number: 3 (lower is better) Translates to: YHLSREWSHNHS*MSLICFSGQWQ Trigger: TTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTGTGACTCCACTCCCTAGACAAATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CCA 72 bp | CAATCTTTATCAACTCCTAACAGTTTCTGTTTCCCTTaGGTTCTCTCCACCTACTTAGTAGCTTGGGGAGTG | + |
Preference number: 3 (lower is better) Translates to: QSLSTPNSFCFP*VLSTYLVAWGV Trigger: CACTCCCCAAGCTACTAAGTAGGTGGAGAGAACCCAAGGGAAACAGAAACTGTTAGGAGTTGATAAAGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR-3UTR CAA 90 bp | GGAAAGCTCACTTTGAGTTGGTACAAAAACAAACAACAGCAAAAACAAACAGAAATGAATTGCCTCCCTTaGACGCGTCCTTTCCCTTTC | + |
Preference number: 3 (lower is better) Translates to: GKLTLSWYKNKQQQKQTEMNCLP*TRPFPF Trigger: GAAAGGGAAAGGACGCGTCAAAGGGAGGCAATTCAT...TTCTGTTTGTTTTTGCTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR GCA 72 bp | ATGAAGAGTTTCAGTCATAACACAGATGAACTAAAATaGGTTTCCTCTTGGAAAGCTCACTTTGAGTTGGTA | + |
Preference number: 3 (lower is better) Translates to: MKSFSHNTDELK*VSSWKAHFELV Trigger: TACCAACTCAAAGTGAGCTTTCCAAGAGGAAACGCATTTTAGTTCATCTGTGTTATGACTGAAACTCTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | TGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTGGCTCAGGAGCCACCTACGTCCACCTaGGTCCCCGCACCTGCCGGC | + |
Preference number: 4 (lower is better) Translates to: CLRKYCAFLCPDPWLAQEPPTST*VPAPAG Trigger: GCCGGCAGGTGCGGGGACCCAGGTGGACGTAGGTGG...CTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | TTCTCCTGGGGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCCGCTCGCGACGCTCCTaGAGCTGGCCTGGAGACACG | + |
Preference number: 4 (lower is better) Translates to: FSWGHRVTFSQGPARISLRSRRS*SWPGDT Trigger: CGTGTCTCCAGGCCAGCTGCAGGAGCGTCGCGAGCG...GAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCCCAGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGATGGCCTGGAGACACGTaGGGGTCGCGCAGGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: GHRVTFSQGPARISLFLRWPGDT*GSRRKL Trigger: GAGCTTCCTGCGCGACCCTCACGTGTCTCCAGGCCA...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | GAGAGAGGAACCCTTCGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTGTCATCCCGGGCAGGTaGAGCGCGCTCCGGCTTCTC | + |
Preference number: 4 (lower is better) Translates to: ERGTLRRLECLDQLWSTFVIPGR*SALRLL Trigger: GAGAAGCCGGAGCGCGCTGCACCTGCCCGGGATGAC...AAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | TTCTCCTGGGGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCAACAGCATCCACCCTTaGGCTGGGCAGGGCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: FSWGHRVTFSQGPARISLNSIHP*AGQGSC Trigger: GCAGGAGCCCTGCCCAGCCCAAGGGTGGATGCTGTT...GAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCCCAGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | TGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTGGCTCAGGAGCGCTGGTGCTGTTGCTaGAGCTGCTGGGTTGAATGG | + |
Preference number: 4 (lower is better) Translates to: CLRKYCAFLCPDPWLAQERWCCC*SCWVEW Trigger: CCATTCAACCCAGCAGCTGCAGCAACAGCACCAGCG...CTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | GTGAGTTCCGGCACTTCCATGAATTGCCTCCCTTTGACGCGTCCTTTCCCTTTCAGGTTTGCCCCGGGGTaGACCCAGGAGCTGCCACGT | + |
Preference number: 4 (lower is better) Translates to: VSSGTSMNCLPLTRPFPFRFAPG*TQELPR Trigger: ACGTGGCAGCTCCTGGGTGCACCCCGGGGCAAACCT...GAAAGGGAAAGGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCCGGAACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | GTGAGTTCCGGCACTTCCATGAATTGCCTCCCTTTGACGCGTCCTTTCCCTTTCACACTTCCCGGCTCTTaGCCTTCCTGGCTGGGGAAG | + |
Preference number: 4 (lower is better) Translates to: VSSGTSMNCLPLTRPFPFTLPGS*PSWLGK Trigger: CTTCCCCAGCCAGGAAGGTCAAGAGCCGGGAAGTGT...GAAAGGGAAAGGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCCGGAACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACAATCATTCCTGAACTCCGGGCTGGGGTCTaGCCCGGCCACCTTCTGCGC | + |
Preference number: 4 (lower is better) Translates to: PSLSVIICLGSGVTIIPELRAGV*PGHLLR Trigger: GCGCAGAAGGTGGCCGGGCCAGACCCCAGCCCGGAG...TTCAGGAATGATTGTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTCACAGTCCAAACATACCCCAGCCGTTCTGCTaGCACTCCCAGCAGCAGCGT | + |
Preference number: 4 (lower is better) Translates to: RRLECLDQLWSTFHSPNIPQPFC*HSQQQR Trigger: ACGCTGCTGCTGGGAGTGCCAGCAGAACGGCTGGGG...TATGTTTGGACTGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | TTCTCCTGGGGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTGTTGCTGCAGCTGCTaGGTTGAATGGTTCGGGGAG | + |
Preference number: 4 (lower is better) Translates to: FSWGHRVTFSQGPARISLCCCSC*VEWFGE Trigger: CTCCCCGAACCATTCAACCCAGCAGCTGCAGCAACA...GAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCCCAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | GTGAGTTCCGGCACTTCCATGAATTGCCTCCCTTTGACGCGTCCTTTCCCTTTCCCCTGTACCTCCTCTTaGGCACCACGTACTTGGTGC | + |
Preference number: 4 (lower is better) Translates to: VSSGTSMNCLPLTRPFPFPCTSS*APRTWC Trigger: GCACCAAGTACGTGGTGCTCAAGAGGAGGTACAGGG...GAAAGGGAAAGGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCCGGAACTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | GTGAGTTCCGGCACTTCCATGAATTGCCTCCCTTTGACGCGTCCTTTCCCTTTCCCTGCTTGGGATCCATaGAGAGTGTGGCTGACTGGC | + |
Preference number: 4 (lower is better) Translates to: VSSGTSMNCLPLTRPFPFPAWDP*RVWLTG Trigger: GCCAGTCAGCCACACTCTTCATGGATCCCAAGCAGG...GAAAGGGAAAGGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCCGGAACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | CAATCATTCCTGAATGTCACTCATCTGCTTCTCCGGTCAATGGCAATGACACCCGGGGTCCTGGCGCACTaGGGCCACCGAGTTCACGAA | + |
Preference number: 4 (lower is better) Translates to: QSFLNVTHLLLRSMAMTPGVLAH*GHRVHE Trigger: TTCGTGAACTCGGTGGCCGCAGTGCGCCAGGACCCC...GGGTGTCATTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | TGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTGGCTCAGGAGTGCTTTGCTATCCAGTaGAAGGCTGTGTACCCAGTC | + |
Preference number: 4 (lower is better) Translates to: CLRKYCAFLCPDPWLAQECFAIQ*KAVYPV Trigger: GACTGGGTACACAGCCTTGCACTGGATAGCAAAGCA...CTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
3UTR CAA 72 bp | TGGCTGGCTCAGGAGAGAGAGGAACCCTTCGCAGGCTaGAGTGCCTGGATCAGCTTTGGTCCACATTTCACA | + |
Preference number: 4 (lower is better) Translates to: WLAQEREEPFAG*SAWISFGPHFT Trigger: TGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTCTCCTGAGCCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | TTCTCCTGGGGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCAGGAAGCTCTTGAAGTaGCTCAGCAGCTCTGCGTTA | + |
Preference number: 4 (lower is better) Translates to: FSWGHRVTFSQGPARISLRKLLK*LSSSAL Trigger: TAACGCAGAGCTGCTGAGCCACTTCAAGAGCTTCCT...GAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCCCAGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGTGCCGTCGGGGTCCTaGCGCACTGCGGCCACCGAG | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKVPSGS*RTAATE Trigger: CTCGGTGGCCGCAGTGCGCCAGGACCCCGACGGCAC...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTCACAGTCCAAACATAGGCTTGAGCAGCCTCTaGCTCCGGTGTCCTCTGGTT | + |
Preference number: 4 (lower is better) Translates to: RRLECLDQLWSTFHSPNIGLSSL*LRCPLV Trigger: AACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCC...TATGTTTGGACTGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | GAGAGAGGAACCCTTCGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTTCCACTCATGCTCCCTaGTGTCTAGAGGGACAAGGG | + |
Preference number: 4 (lower is better) Translates to: ERGTLRRLECLDQLWSTFSTHAP*CLEGQG Trigger: CCCTTGTCCCTCTAGACACCAGGGAGCATGAGTGGA...AAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | CAATCATTCCTGAATGTCACTCATCTGCTTCTCCGGTCAATGGCAATGACACCCCGCGCAGGAAGCTCTTaGAGTGGCTCAGCAGCTCTG | + |
Preference number: 4 (lower is better) Translates to: QSFLNVTHLLLRSMAMTPRAGSS*SGSAAL Trigger: CAGAGCTGCTGAGCCACTTCAAGAGCTTCCTGCGCG...GGGTGTCATTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | CGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTCACAGTCCAAACATAACTCCCTGGTGCCCGTaGATAGCTGCAAGGTGCAGT | + |
Preference number: 4 (lower is better) Translates to: RRLECLDQLWSTFHSPNITPWCP*IAARCS Trigger: ACTGCACCTTGCAGCTATTCACGGGCACCAGGGAGT...TATGTTTGGACTGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCCTGGGTCCCCGCACCTaGCGGCGGCTTCTGCGGCTC | + |
Preference number: 4 (lower is better) Translates to: LYLAASQSSDAFNTYCFPLGPRT*RRLLRL Trigger: GAGCCGCAGAAGCCGCCGGCAGGTGCGGGGACCCAG...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | CGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTCACAGTCCAAACATAGTCAGGAAGTCTCTGTaGAAAGCCAGCTGGGGGTCC | + |
Preference number: 4 (lower is better) Translates to: RRLECLDQLWSTFHSPNIVRKSL*KASWGS Trigger: GGACCCCCAGCTGGCTTTGCACAGAGACTTCCTGAC...TATGTTTGGACTGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | GTGAGTTCCGGCACTTCCATGAATTGCCTCCCTTTGACGCGTCCTTTCCCTTTCACTGCCATGGCTTCTTaGCACTGCAGTCCCGAATGT | + |
Preference number: 4 (lower is better) Translates to: VSSGTSMNCLPLTRPFPFTAMAS*HCSPEC Trigger: ACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGT...GAAAGGGAAAGGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCCGGAACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCACAGGGCCCGGTCGCTaGAGGCCCTCCTCCCCCAGT | + |
Preference number: 4 (lower is better) Translates to: LYLAASQSSDAFNTYCFPTGPGR*RPSSPS Trigger: ACTGGGGGAGGAGGGCCTGCAGCGACCGGGCCCTGT...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGGCTCCGGTGTCCTCTaGTTCGGGCTGTCCTCCGGG | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKGSGVL*FGLSSG Trigger: CCCGGAGGACAGCCCGAACCAGAGGACACCGGAGCC...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCGCAGCGGCTGTCCGGTaGACTGTCCCCAGCCGTTCT | + |
Preference number: 4 (lower is better) Translates to: MLHSPATILFHWLDLPKGAAAVR*TVPSRS Trigger: AGAACGGCTGGGGACAGTCCACCGGACAGCCGCTGC...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | GAGAGAGGAACCCTTCGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTGCAAGGGCTGTCGTTTaGTGGCAAAAACAGATCCTC | + |
Preference number: 4 (lower is better) Translates to: ERGTLRRLECLDQLWSTFARAVV*WQKQIL Trigger: GAGGATCTGTTTTTGCCACCAAACGACAGCCCTTGC...AAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CAATCATTCCTGAATGTCACTCATCTGCTTCTCCGGTCAATGGCAATGACACCCGCAATGCCCGCCTTCTaGGCTCCAGAGACCAAATCC | + |
Preference number: 4 (lower is better) Translates to: QSFLNVTHLLLRSMAMTPAMPAF*APETKS Trigger: GGATTTGGTCTCTGGAGCCCAGAAGGCGGGCATTGC...GGGTGTCATTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCACCACGTACTTGGTaGCGTCGGGGTCCTGGCGCA | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKAPRTW*RRGPGA Trigger: TGCGCCAGGACCCCGACGGCACCAAGTACGTGGTGC...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | ACAGAAAACAAAACCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACCCACAGCCGCACACCTaGCTCTGGCTTGAGCAGCCT | + |
Preference number: 4 (lower is better) Translates to: TENKTESECYHLSREWSHPQPHT*LWLEQP Trigger: AGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTGG...GTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGGTTTTGTTTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGACTTCCATGGCTCTCTTaGTCCACAAAGTCATTCAGA | + |
Preference number: 4 (lower is better) Translates to: GHRVTFSQGPARISLFLRLPWLS*STKSFR Trigger: TCTGAATGACTTTGTGGAGCAAGAGAGCCATGGAAG...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCACTCGGCCCCCGGCCTaGCACAGAAAGTCCAGCAGT | + |
Preference number: 4 (lower is better) Translates to: MLHSPATILFHWLDLPKGTRPPA*HRKSSS Trigger: ACTGCTGGACTTTCTGTGCCAGGCCGGGGGCCGAGT...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CAATCATTCCTGAATGTCACTCATCTGCTTCTCCGGTCAATGGCAATGACACCCCTGTGCAAAGCCAGCTaGGGGTCCTCCCAGAACAAA | + |
Preference number: 4 (lower is better) Translates to: QSFLNVTHLLLRSMAMTPLCKAS*GSSQNK Trigger: TTTGTTCTGGGAGGACCCCCAGCTGGCTTTGCACAG...GGGTGTCATTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | CAATCATTCCTGAATGTCACTCATCTGCTTCTCCGGTCAATGGCAATGACACCCTCCTGGAGGGACAGCTaGCAACGAATGCTTCGAAAG | + |
Preference number: 4 (lower is better) Translates to: QSFLNVTHLLLRSMAMTPSWRDS*QRMLRK Trigger: CTTTCGAAGCATTCGTTGTCAGCTGTCCCTCCAGGA...GGGTGTCATTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | GGAAAGCTCACTTTGAGTTGGTACAAAAACAAACAACAGCAAAAACAAACAGAAGGCCCGGCCACCTTCTaGGCGCTGCCACCTACGTCC | + |
Preference number: 4 (lower is better) Translates to: GKLTLSWYKNKQQQKQTEGPATF*ALPPTS Trigger: GGACGTAGGTGGCAGCGCGCAGAAGGTGGCCGGGCC...TTCTGTTTGTTTTTGCTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCCTCCTGCAGCTGGCCTaGAGACACGTGAGGGTCGCG | + |
Preference number: 4 (lower is better) Translates to: LYLAASQSSDAFNTYCFPLLQLA*RHVRVA Trigger: CGCGACCCTCACGTGTCTCCAGGCCAGCTGCAGGAG...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCGCAGGGAAGGGCTCTTaGGGGTGGTCTCCAAGGCTT | + |
Preference number: 4 (lower is better) Translates to: MLHSPATILFHWLDLPKGAGKGS*GWSPRL Trigger: AAGCCTTGGAGACCACCCCCAAGAGCCCTTCCCTGC...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | GAGAGAGGAACCCTTCGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTCTCTTCTCTCTCCTTTaGGGTGTGGATTTTCTCATA | + |
Preference number: 4 (lower is better) Translates to: ERGTLRRLECLDQLWSTFLFSLL*GVDFLI Trigger: TATGAGAAAATCCACACCTCAAAGGAGAGAGAAGAG...AAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCCAGAAAGTCCAGCAGTaGCTCCTGGCTCAGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: MLHSPATILFHWLDLPKGQKVQQ*LLAQLS Trigger: GGAGAGCTGAGCCAGGAGGCACTGCTGGACTTTCTG...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGTCGGGCTCAGGCACCTaGAGGTATCTGGCTACCCAC | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKSGSGT*RYLATH Trigger: GTGGGTAGCCAGATACCTGCAGGTGCCTGAGCCCGA...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | CGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTCACAGTCCAAACATAAAGTCCTCATCAGGATaGTCCTCGTCTGAGGAAGAA | + |
Preference number: 4 (lower is better) Translates to: RRLECLDQLWSTFHSPNIKSSSG*SSSEEE Trigger: TTCTTCCTCAGACGAGGAGCATCCTGATGAGGACTT...TATGTTTGGACTGTGAAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGCTGGAGGAAGTTGTCTaGCAACACCGACCAGGCGCG | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKLEEVV*QHRPGA Trigger: CGCGCCTGGTCGGTGTTGCCAGACAACTTCCTCCAG...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | ACAGAAAACAAAACCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACCCAGAGACCAAATCCTaGAGGGCACACAGGTCACCA | + |
Preference number: 4 (lower is better) Translates to: TENKTESECYHLSREWSHPETKS*RAHRSP Trigger: TGGTGACCTGTGTGCCCTTCAGGATTTGGTCTCTGG...GTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGGTTTTGTTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | CCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACAATCATTCCTGAACTCACAATCCACTCATaGTCCCTGGTGTCTAGAGGG | + |
Preference number: 4 (lower is better) Translates to: PSLSVIICLGSGVTIIPELTIHS*SLVSRG Trigger: CCCTCTAGACACCAGGGAGCATGAGTGGATTGTGAG...TTCAGGAATGATTGTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCCAGACCTTCGGAACTTaGGGGCAGGGAAGGGCTCTT | + |
Preference number: 4 (lower is better) Translates to: LYLAASQSSDAFNTYCFPQTFGT*GQGRAL Trigger: AAGAGCCCTTCCCTGCCCTCAAGTTCCGAAGGTCTG...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGTGCTGTTGCTGCAGCTaGTGGGTTGAATGGTTCGGG | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKCCCCS*WVEWFG Trigger: CCCGAACCATTCAACCCAGCAGCTGCAGCAACAGCA...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGCTTTGGGTCCACTGCTaGTCTCCTCACTTCCATGGC | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKLWVHC*SPHFHG Trigger: GCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAG...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | CCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACAATCATTCCTGAACAGGTCACCATGCTTTaGTATCCAGTGCAAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: PSLSVIICLGSGVTIIPEQVTML*YPVQGC Trigger: ACAGCCTTGCACTGGATAGCAAAGCATGGTGACCTG...TTCAGGAATGATTGTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | GGAAAGCTCACTTTGAGTTGGTACAAAAACAAACAACAGCAAAAACAAACAGAACCTTGGAAGGTTTCCTaGACCGAGGTGGGCGCCGAC | + |
Preference number: 4 (lower is better) Translates to: GKLTLSWYKNKQQQKQTEPWKVS*TEVGAD Trigger: GTCGGCGCCCACCTCGGTCCAGGAAACCTTCCAAGG...TTCTGTTTGTTTTTGCTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCGCACACAGGTCACCATaGTTTGCTATCCAGTGCAAG | + |
Preference number: 4 (lower is better) Translates to: MLHSPATILFHWLDLPKGAHRSP*FAIQCK Trigger: CTTGCACTGGATAGCAAAGCATGGTGACCTGTGTGC...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGTTCCGGGAGATTCTTTaGGTCCACTGCTGCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKFREIL*VHCCSP Trigger: AGGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAA...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CAAACAGAAAACAAAACCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTGAAGCCAGGAACCACTaGCAAGCCTCACAATCCACT | + |
Preference number: 4 (lower is better) Translates to: QTENKTESECYHLSREWSEARNH*QASQST Trigger: AGTGGATTGTGAGGCTTGCCAGTGGTTCCTGGCTTC...ACTCCACTCCCTAGACAAATGATAACACTCAGACTCGGTTTTGTTTTCTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CAAACAGAAAACAAAACCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTAGCTGCAAGGTGCAGTaGGGTATAGCCACAACTGGA | + |
Preference number: 4 (lower is better) Translates to: QTENKTESECYHLSREWSSCKVQ*GIATTG Trigger: TCCAGTTGTGGCTATACCCCACTGCACCTTGCAGCT...ACTCCACTCCCTAGACAAATGATAACACTCAGACTCGGTTTTGTTTTCTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR TCA 90 bp | ATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGGCTGTTGTGCTGAGTTTTaGGCAAAGCAGCCAAGGAAG | + |
Preference number: 4 (lower is better) Translates to: MLHSPATILFHWLDLPKGCCAEF*AKQPRK Trigger: CTTCCTTGGCTGCTTTGCTCAAAACTCAGCACAACA...GCCTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | GGAAAGCTCACTTTGAGTTGGTACAAAAACAAACAACAGCAAAAACAAACAGAAGTGCGCTGGTGCTGTTaGTGCAGCTGCTGGGTTGAA | + |
Preference number: 4 (lower is better) Translates to: GKLTLSWYKNKQQQKQTEVRWCC*CSCWVE Trigger: TTCAACCCAGCAGCTGCAGCAACAGCACCAGCGCAC...TTCTGTTTGTTTTTGCTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | ACAGAAAACAAAACCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACGTTTCTGAAGGTAGCTaGAGGAAGTTGTCTGGCAAC | + |
Preference number: 4 (lower is better) Translates to: TENKTESECYHLSREWSHVSEGS*RKLSGN Trigger: GTTGCCAGACAACTTCCTCCAGCTACCTTCAGAAAC...GTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGGTTTTGTTTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGCTCTCCTCACTTCCATaGCTCTCTTGCTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKLSSLP*LSCSTK Trigger: CTTTGTGGAGCAAGAGAGCCATGGAAGTGAGGAGAG...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGTGCTCAGAAGGTCTGTaGGGTATCAAGGCTGCAGAT | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKCSEGL*GIKAAD Trigger: ATCTGCAGCCTTGATACCCCACAGACCTTCTGAGCA...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGAGGGCTGTCGTTTGGTaGCAAAAACAGATCCTCAAC | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKRAVVW*QKQILN Trigger: GTTGAGGATCTGTTTTTGCCACCAAACGACAGCCCT...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | CCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACAATCATTCCTGAACTCTCCTTTGAGGTGTaGATTTTCTCATATTGGCTG | + |
Preference number: 4 (lower is better) Translates to: PSLSVIICLGSGVTIIPELSFEV*IFSYWL Trigger: CAGCCAATATGAGAAAATCCACACCTCAAAGGAGAG...TTCAGGAATGATTGTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGAGGAAGAAGGAGATTTaGTTCTTCCTGTTCGAGAGC | + |
Preference number: 4 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKRKKEI*FFLFES Trigger: GCTCTCGAACAGGAAGAACCAAATCTCCTTCTTCCT...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCTTACTGTTCAGATACTaGCATGGCTTCTTGCCACTG | + |
Preference number: 4 (lower is better) Translates to: LYLAASQSSDAFNTYCFPLLFRY*HGFLPL Trigger: CAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAA...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CCA 90 bp | GGAAAGCTCACTTTGAGTTGGTACAAAAACAAACAACAGCAAAAACAAACAGAAGTTCAGATACTGCCATaGCTTCTTGCCACTGCAGTC | + |
Preference number: 4 (lower is better) Translates to: GKLTLSWYKNKQQQKQTEVQILP*LLATAV Trigger: GACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAAC...TTCTGTTTGTTTTTGCTGTTGTTTGTTTTTGTACCAACTCAAAGTGAGCTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR GCA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCCGAGAAGCCAGTCTTTaGACTAGCAATTTGATGACT | + |
Preference number: 4 (lower is better) Translates to: LYLAASQSSDAFNTYCFPREASL*TSNLMT Trigger: AGTCATCAAATTGCTAGTGCAAAGACTGGCTTCTCG...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | CACCTTCTGCGCGCTGCCACCTACGTCCACCTGGGTCCCCGCACCTaGCGGCGGCTTCTGCGGCTCCGGGTCACGGCGGCGGTGGCCCCG | + |
Preference number: 5 (lower is better) Translates to: HLLRAATYVHLGPRT*RRLLRLRVTAAVAP Trigger: CGGGGCCACCGCCGCCGTGACCCGGAGCCGCAGAAGCCGCCGGCAGGTGCGGGGACCCAGGTGGACGTAGGTGGCAGCGCGCAGAAGGTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | TGGTTCGGGCTGTCCTCCGGGCTGGGGTCTGGCCCGGCCACCTTCTaGGCGCTGCCACCTACGTCCACCTGGGTCCCCGCACCTGCCGGC | + |
Preference number: 5 (lower is better) Translates to: WFGLSSGLGSGPATF*ALPPTSTWVPAPAG Trigger: GCCGGCAGGTGCGGGGACCCAGGTGGACGTAGGTGGCAGCGCGCAGAAGGTGGCCGGGCCAGACCCCAGCCCGGAGGACAGCCCGAACCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | TCGACGGCGGTCGGAGGCCAGACAGGCGGTACAGATCCAGGCGCGTaGTCGGCGGCCTCTCCTTCCCTCAGCCACCCCGGAGCTCCGAGG | + |
Preference number: 5 (lower is better) Translates to: STAVGGQTGGTDPGA*SAASPSLSHPGAPR Trigger: CCTCGGAGCTCCGGGGTGGCTGAGGGAAGGAGAGGCCGCCGAGCACGCGCCTGGATCTGTACCGCCTGTCTGGCCTCCGACCGCCGTCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | CGGCGGCGGTGGCCCCGCGGCTTTCCATCTACAGGGCCCGGTCGCTaGAGGCCCTCCTCCCCCAGTAGGTCCCTGTACCTCCTCTTGAGC | + |
Preference number: 5 (lower is better) Translates to: RRRWPRGFPSTGPGR*RPSSPSRSLYLLLS Trigger: GCTCAAGAGGAGGTACAGGGACCTACTGGGGGAGGAGGGCCTGCAGCGACCGGGCCCTGTAGATGGAAAGCCGCGGGGCCACCGCCGCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | TCGCGTCCCCACAGCCGCACACCTGCCTCTGGCTTGAGCAGCCTCTaGCTCCGGTGTCCTCTGGTTCGGGCTGTCCTCCGGGCTGGGGTC | + |
Preference number: 5 (lower is better) Translates to: SRPHSRTPASGLSSL*LRCPLVRAVLRAGV Trigger: GACCCCAGCCCGGAGGACAGCCCGAACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTGGGGACGCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | CGTCGGGGTCCTGGCGCACTGCGGCCACCGAGTTCACGAAGCCCTTaGAGCGCTCGCGACGCTCCTGCAGCTGGCCTGGAGACACGTGAG | + |
Preference number: 5 (lower is better) Translates to: RRGPGALRPPSSRSP*SARDAPAAGLETRE Trigger: CTCACGTGTCTCCAGGCCAGCTGCAGGAGCGTCGCGAGCGCTTCAAGGGCTTCGTGAACTCGGTGGCCGCAGTGCGCCAGGACCCCGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | CAGCAGCGTCCTCGCGTCCCCACAGCCGCACACCTGCCTCTGGCTTaGGCAGCCTCTGGCTCCGGTGTCCTCTGGTTCGGGCTGTCCTCC | + |
Preference number: 5 (lower is better) Translates to: QQRPRVPTAAHLPLA*AASGSGVLWFGLSS Trigger: GGAGGACAGCCCGAACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTGGGGACGCGAGGACGCTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | GGCACTCCCAGCAGCAGCGTCCTCGCGTCCCCACAGCCGCACACCTaGCTCTGGCTTGAGCAGCCTCTGGCTCCGGTGTCCTCTGGTTCG | + |
Preference number: 5 (lower is better) Translates to: GTPSSSVLASPQPHT*LWLEQPLAPVSSGS Trigger: CGAACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTGGGGACGCGAGGACGCTGCTGCTGGGAGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | TCTTCTGGCAGCGGCTGTCCGGTGGACTGTCCCCAGCCGTTCTGCTaGCACTCCCAGCAGCAGCGTCCTCGCGTCCCCACAGCCGCACAC | + |
Preference number: 5 (lower is better) Translates to: SSGSGCPVDCPQPFC*HSQQQRPRVPTAAH Trigger: GTGTGCGGCTGTGGGGACGCGAGGACGCTGCTGCTGGGAGTGCCAGCAGAACGGCTGGGGACAGTCCACCGGACAGCCGCTGCCAGAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | GTCGCTGCAGGCCCTCCTCCCCCAGTAGGTCCCTGTACCTCCTCTTaGGCACCACGTACTTGGTGCCGTCGGGGTCCTGGCGCACTGCGG | + |
Preference number: 5 (lower is better) Translates to: VAAGPPPPVGPCTSS*APRTWCRRGPGALR Trigger: CCGCAGTGCGCCAGGACCCCGACGGCACCAAGTACGTGGTGCTCAAGAGGAGGTACAGGGACCTACTGGGGGAGGAGGGCCTGCAGCGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | AGATCTTCTGGCAGCGGCTGTCCGGTGGACTGTCCCCAGCCGTTCTaGTGGCACTCCCAGCAGCAGCGTCCTCGCGTCCCCACAGCCGCA | + |
Preference number: 5 (lower is better) Translates to: RSSGSGCPVDCPQPF*WHSQQQRPRVPTAA Trigger: TGCGGCTGTGGGGACGCGAGGACGCTGCTGCTGGGAGTGCCAGCAGAACGGCTGGGGACAGTCCACCGGACAGCCGCTGCCAGAAGATCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | CCTGCAGCTGGCCTGGAGACACGTGAGGGTCGCGCAGGAAGCTCTTaGAGTGGCTCAGCAGCTCTGCGTTACGCACTCGGCCCCCGGCCT | + |
Preference number: 5 (lower is better) Translates to: PAAGLETREGRAGSS*SGSAALRYALGPRP Trigger: AGGCCGGGGGCCGAGTGCGTAACGCAGAGCTGCTGAGCCACTTCAAGAGCTTCCTGCGCGACCCTCACGTGTCTCCAGGCCAGCTGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | CCCTTGAAGCGCTCGCGACGCTCCTGCAGCTGGCCTGGAGACACGTaGGGGTCGCGCAGGAAGCTCTTGAAGTGGCTCAGCAGCTCTGCG | + |
Preference number: 5 (lower is better) Translates to: PLKRSRRSCSWPGDT*GSRRKLLKWLSSSA Trigger: CGCAGAGCTGCTGAGCCACTTCAAGAGCTTCCTGCGCGACCCTCACGTGTCTCCAGGCCAGCTGCAGGAGCGTCGCGAGCGCTTCAAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | CACGTGAGGGTCGCGCAGGAAGCTCTTGAAGTGGCTCAGCAGCTCTaGGTTACGCACTCGGCCCCCGGCCTGGCACAGAAAGTCCAGCAG | + |
Preference number: 5 (lower is better) Translates to: HVRVAQEALEVAQQL*VTHSAPGLAQKVQQ Trigger: CTGCTGGACTTTCTGTGCCAGGCCGGGGGCCGAGTGCGTAACGCAGAGCTGCTGAGCCACTTCAAGAGCTTCCTGCGCGACCCTCACGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | GCCGAGCTGGTCTCCGAGACCCCAAAGGCGGTTTCTGAAGGTAGCTaGAGGAAGTTGTCTGGCAACACCGACCAGGCGCGAGTGGGCGCC | + |
Preference number: 5 (lower is better) Translates to: AELVSETPKAVSEGS*RKLSGNTDQARVGA Trigger: GGCGCCCACTCGCGCCTGGTCGGTGTTGCCAGACAACTTCCTCCAGCTACCTTCAGAAACCGCCTTTGGGGTCTCGGAGACCAGCTCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | GTTCACGAAGCCCTTGAAGCGCTCGCGACGCTCCTGCAGCTGGCCTaGAGACACGTGAGGGTCGCGCAGGAAGCTCTTGAAGTGGCTCAG | + |
Preference number: 5 (lower is better) Translates to: VHEALEALATLLQLA*RHVRVAQEALEVAQ Trigger: CTGAGCCACTTCAAGAGCTTCCTGCGCGACCCTCACGTGTCTCCAGGCCAGCTGCAGGAGCGTCGCGAGCGCTTCAAGGGCTTCGTGAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | TGGAGGAAGTTGTCTGGCAACACCGACCAGGCGCGAGTGGGCGCCTaGATCTCGGGCTCAGGCACCTGCAGGTATCTGGCTACCCACTCT | + |
Preference number: 5 (lower is better) Translates to: WRKLSGNTDQARVGA*ISGSGTCRYLATHS Trigger: AGAGTGGGTAGCCAGATACCTGCAGGTGCCTGAGCCCGAGATCCAGGCGCCCACTCGCGCCTGGTCGGTGTTGCCAGACAACTTCCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | AAGGTAGCTGGAGGAAGTTGTCTGGCAACACCGACCAGGCGCGAGTaGGCGCCTGGATCTCGGGCTCAGGCACCTGCAGGTATCTGGCTA | + |
Preference number: 5 (lower is better) Translates to: KVAGGSCLATPTRRE*APGSRAQAPAGIWL Trigger: TAGCCAGATACCTGCAGGTGCCTGAGCCCGAGATCCAGGCGCCCACTCGCGCCTGGTCGGTGTTGCCAGACAACTTCCTCCAGCTACCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | TGGGCTGGGCAGGGCTCCTGCCTTGGAAGGTTTCCTGGACCGAGGTaGGCGCCGACTCCTTTTCCACAAGTCCTCATCAGGATGCTCCTC | + |
Preference number: 5 (lower is better) Translates to: WAGQGSCLGRFPGPR*APTPFPQVLIRMLL Trigger: GAGGAGCATCCTGATGAGGACTTGTGGAAAAGGAGTCGGCGCCCACCTCGGTCCAGGAAACCTTCCAAGGCAGGAGCCCTGCCCAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | TCTCGGGCTCAGGCACCTGCAGGTATCTGGCTACCCACTCTTGAGTaGGCTGGTGCTGTTGCTGCAGCTGCTGGGTTGAATGGTTCGGGG | + |
Preference number: 5 (lower is better) Translates to: SRAQAPAGIWLPTLE*AGAVAAAAGLNGSG Trigger: CCCCGAACCATTCAACCCAGCAGCTGCAGCAACAGCACCAGCGCACTCAAGAGTGGGTAGCCAGATACCTGCAGGTGCCTGAGCCCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | GTACCAAAACAGCATCCACCCTTGGGCTGGGCAGGGCTCCTGCCTTaGAAGGTTTCCTGGACCGAGGTGGGCGCCGACTCCTTTTCCACA | + |
Preference number: 5 (lower is better) Translates to: VPKQHPPLGWAGLLP*KVSWTEVGADSFST Trigger: TGTGGAAAAGGAGTCGGCGCCCACCTCGGTCCAGGAAACCTTCCAAGGCAGGAGCCCTGCCCAGCCCAAGGGTGGATGCTGTTTTGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | TACCCACTCTTGAGTGCGCTGGTGCTGTTGCTGCAGCTGCTGGGTTaGATGGTTCGGGGAGCCGGCGGTAAACAGCTCCAGTGGCTCTCT | + |
Preference number: 5 (lower is better) Translates to: YPLLSALVLLLQLLG*MVRGAGGKQLQWLS Trigger: AGAGAGCCACTGGAGCTGTTTACCGCCGGCTCCCCGAACCATTCAACCCAGCAGCTGCAGCAACAGCACCAGCGCACTCAAGAGTGGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | GGCCAGGATTCTGAGGACTCATCGAGAACCACGGGAAGGAGAGAATaGAAAGACAGAGCGGGCTCTGGCAGCGCCGAGCTGGTCTCCGAG | + |
Preference number: 5 (lower is better) Translates to: GQDSEDSSRTTGRRE*KDRAGSGSAELVSE Trigger: CTCGGAGACCAGCTCGGCGCTGCCAGAGCCCGCTCTGTCTTTTCATTCTCTCCTTCCCGTGGTTCTCGATGAGTCCTCAGAATCCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | TTTCTGTACCAAAACAGCATCCACCCTTGGGCTGGGCAGGGCTCCTaGCTTGGAAGGTTTCCTGGACCGAGGTGGGCGCCGACTCCTTTT | + |
Preference number: 5 (lower is better) Translates to: FLYQNSIHPWAGQGS*LGRFPGPRWAPTPF Trigger: AAAAGGAGTCGGCGCCCACCTCGGTCCAGGAAACCTTCCAAGGCAGGAGCCCTGCCCAGCCCAAGGGTGGATGCTGTTTTGGTACAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | CTCCTCCTGACAGACCTTCGGAACTTGAGGGCAGGGAAGGGCTCTTaGGGGTGGTCTCCAAGGCTTTTAGCCACTGTTGGGACCTTCCGA | + |
Preference number: 5 (lower is better) Translates to: LLLTDLRNLRAGKGS*GWSPRLLATVGTFR Trigger: TCGGAAGGTCCCAACAGTGGCTAAAAGCCTTGGAGACCACCCCCAAGAGCCCTTCCCTGCCCTCAAGTTCCGAAGGTCTGTCAGGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | CTGTGCAAAGCCAGCTGGGGGTCCTCCCAGAACAAAGTCAGCACGTaGAGCCAGGAACCACTGGCAAGCCTCACAATCCACTCATGCTCC | + |
Preference number: 5 (lower is better) Translates to: LCKASWGSSQNKVST*SQEPLASLTIHSCS Trigger: GGAGCATGAGTGGATTGTGAGGCTTGCCAGTGGTTCCTGGCTTCACGTGCTGACTTTGTTCTGGGAGGACCCCCAGCTGGCTTTGCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | TCAAGACAGGTTGCAGCCCCTCTTCGGGGGTTCCGGGAGATTCTTTaGGTCCACTGCTGCTCTCCTCACTTCCATGGCTCTCTTGCTCCA | + |
Preference number: 5 (lower is better) Translates to: SRQVAAPLRGFREIL*VHCCSPHFHGSLAP Trigger: TGGAGCAAGAGAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAACCCCCGAAGAGGGGCTGCAACCTGTCTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | GGGGGTCCTCCCAGAACAAAGTCAGCACGTGAAGCCAGGAACCACTaGCAAGCCTCACAATCCACTCATGCTCCCTGGTGTCTAGAGGGA | + |
Preference number: 5 (lower is better) Translates to: GGPPRTKSAREARNH*QASQSTHAPWCLEG Trigger: TCCCTCTAGACACCAGGGAGCATGAGTGGATTGTGAGGCTTGCCAGTGGTTCCTGGCTTCACGTGCTGACTTTGTTCTGGGAGGACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | GCAGCCCCTCTTCGGGGGTTCCGGGAGATTCTTTGGGTCCACTGCTaGTCTCCTCACTTCCATGGCTCTCTTGCTCCACAAAGTCATTCA | + |
Preference number: 5 (lower is better) Translates to: AAPLRGFREILWVHC*SPHFHGSLAPQSHS Trigger: TGAATGACTTTGTGGAGCAAGAGAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAACCCCCGAAGAGGGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | GTTGCAGCCCCTCTTCGGGGGTTCCGGGAGATTCTTTGGGTCCACTaGTGCTCTCCTCACTTCCATGGCTCTCTTGCTCCACAAAGTCAT | + |
Preference number: 5 (lower is better) Translates to: VAAPLRGFREILWVH*CSPHFHGSLAPQSH Trigger: ATGACTTTGTGGAGCAAGAGAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAACCCCCGAAGAGGGGCTGCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | TGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTGGCTCAGGAGACAGGTCACCATGCTTaGCTATCCAGTGCAAGGCTG | + |
Preference number: 5 (lower is better) Translates to: CLRKYCAFLCPDPWLAQETGHHA*LSSARL Trigger: CAGCCTTGCACTGGATAGCAAAGCATGGTGACCTGT...CTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | CCCAGGAGCTGCCACGTTTCCCCAGAGACGTTACTGTTCAGATACTaGCATGGCTTCTTGCCACTGCAGTCCCGAATGTTCACCCGAGAA | + |
Preference number: 5 (lower is better) Translates to: PRSCHVSPETLLFRY*HGFLPLQSRMFTRE Trigger: TTCTCGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACGTCTCTGGGGAAACGTGGCAGCTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 90 bp | GAGCTGCCACGTTTCCCCAGAGACGTTACTGTTCAGATACTGCCATaGCTTCTTGCCACTGCAGTCCCGAATGTTCACCCGAGAAGCCAG | + |
Preference number: 5 (lower is better) Translates to: ELPRFPRDVTVQILP*LLATAVPNVHPRSQ Trigger: CTGGCTTCTCGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACGTCTCTGGGGAAACGTGGCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | GGTCACAGAGTCACCTTCAGCCAGGGACCTGCAAGGATTAGCCTCTTCCTGAGATCCCTGTACCTCCTCTaGAGCACCACGTACTTGGTG | + |
Preference number: 5 (lower is better) Translates to: GHRVTFSQGPARISLFLRSLYLL*STTYLV Trigger: CACCAAGTACGTGGTGCTCAAGAGGAGGTACAGGGA...TCTCAGGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | ACATCTAGTGCAATGCCCGCCTTCTGGGCTCCAGAGACCAAATCCTaGAGGGCACACAGGTCACCATGCTTTGCTATCCAGTGCAAGGCT | + |
Preference number: 5 (lower is better) Translates to: TSSAMPAFWAPETKS*RAHRSPCFAIQCKA Trigger: AGCCTTGCACTGGATAGCAAAGCATGGTGACCTGTGTGCCCTTCAGGATTTGGTCTCTGGAGCCCAGAAGGCGGGCATTGCACTAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | GACCGAGGTGGGCGCCGACTCCTTTTCCACAAGTCCTCATCAGGATaGTCCTCGTCTGAGGAAGAAGGAGATTTGGTTCTTCCTGTTCGA | + |
Preference number: 5 (lower is better) Translates to: DRGGRRLLFHKSSSG*SSSEEEGDLVLPVR Trigger: TCGAACAGGAAGAACCAAATCTCCTTCTTCCTCAGACGAGGAGCATCCTGATGAGGACTTGTGGAAAAGGAGTCGGCGCCCACCTCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | GGCTCCAGAGACCAAATCCTGAAGGGCACACAGGTCACCATGCTTTaGTATCCAGTGCAAGGCTGTGTACCCAGTCAGGAAGTCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: GSRDQILKGTQVTML*YPVQGCVPSQEVSV Trigger: CACAGAGACTTCCTGACTGGGTACACAGCCTTGCACTGGATAGCAAAGCATGGTGACCTGTGTGCCCTTCAGGATTTGGTCTCTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | CAATCATTCCTGAATGTCACTCATCTGCTTCTCCGGTCAATGGCAATGACACCCTTGAGCACCACGTACTaGGTGCCGTCGGGGTCCTGG | + |
Preference number: 5 (lower is better) Translates to: QSFLNVTHLLLRSMAMTPLSTTY*VPSGSW Trigger: CCAGGACCCCGACGGCACCAAGTACGTGGTGCTCAA...GGGTGTCATTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | GAGAGAGGAACCCTTCGCAGGCTTGAGTGCCTGGATCAGCTTTGGTCCACATTTTACTGCCATGGCTTCTaGCCACTGCAGTCCCGAATG | + |
Preference number: 5 (lower is better) Translates to: ERGTLRRLECLDQLWSTFYCHGF*PLQSRM Trigger: CATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTA...AAATGTGGACCAAAGCTGATCCAGGCACTCAAGCCTGCGAAGGGTTCCTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | TGGCTCTCTTGCTCCACAAAGTCATTCAGATCCTGGAGGGACAGCTaGCAACGAATGCTTCGAAAGACGGTAGATGGAGCGTTCCCTGGC | + |
Preference number: 5 (lower is better) Translates to: WLSCSTKSFRSWRDS*QRMLRKTVDGAFPG Trigger: GCCAGGGAACGCTCCATCTACCGTCTTTCGAAGCATTCGTTGTCAGCTGTCCCTCCAGGATCTGAATGACTTTGTGGAGCAAGAGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | GCGCCGACTCCTTTTCCACAAGTCCTCATCAGGATGCTCCTCGTCTaGGGAAGAAGGAGATTTGGTTCTTCCTGTTCGAGAGCTCCTCCT | + |
Preference number: 5 (lower is better) Translates to: APTPFPQVLIRMLLV*GRRRFGSSCSRAPP Trigger: AGGAGGAGCTCTCGAACAGGAAGAACCAAATCTCCTTCTTCCTCAGACGAGGAGCATCCTGATGAGGACTTGTGGAAAAGGAGTCGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | GTGGGGTATAGCCACAACTGGACCTCACATTTACATCTAGTGCAATaGCCGCCTTCTGGGCTCCAGAGACCAAATCCTGAAGGGCACACA | + |
Preference number: 5 (lower is better) Translates to: VGYSHNWTSHLHLVQ*PPSGLQRPNPEGHT Trigger: TGTGTGCCCTTCAGGATTTGGTCTCTGGAGCCCAGAAGGCGGGCATTGCACTAGATGTAAATGTGAGGTCCAGTTGTGGCTATACCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | CCCCAGAGACGTTACTGTTCAGATACTGCCATGGCTTCTTGCCACTaGAGTCCCGAATGTTCACCCGAGAAGCCAGTCTTTGCACTAGCA | + |
Preference number: 5 (lower is better) Translates to: PQRRYCSDTAMASCH*SPECSPEKPVFALA Trigger: TGCTAGTGCAAAGACTGGCTTCTCGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACGTCTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 90 bp | TCTGTGGGGTATCAAGGCTGCAGATCCATCCCTGCTTGGGATCCATaGAGAGTGTGGCTGACTGGCCACAGCATTAGCATCTGCCAATTT | + |
Preference number: 5 (lower is better) Translates to: SVGYQGCRSIPAWDP*RVWLTGHSISICQF Trigger: AAATTGGCAGATGCTAATGCTGTGGCCAGTCAGCCACACTCTTCATGGATCCCAAGCAGGGATGGATCTGCAGCCTTGATACCCCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 90 bp | ACGTTTCCCCAGAGACGTTACTGTTCAGATACTGCCATGGCTTCTTaGCACTGCAGTCCCGAATGTTCACCCGAGAAGCCAGTCTTTGCA | + |
Preference number: 5 (lower is better) Translates to: TFPQRRYCSDTAMAS*HCSPECSPEKPVFA Trigger: TGCAAAGACTGGCTTCTCGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACGTCTCTGGGGAAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | CAATCATTCCTGAATGTCACTCATCTGCTTCTCCGGTCAATGGCAATGACACCCTCGCGCAGGAAGCTCTaGAAGTGGCTCAGCAGCTCT | + |
Preference number: 5 (lower is better) Translates to: QSFLNVTHLLLRSMAMTPSRRKL*KWLSSS Trigger: AGAGCTGCTGAGCCACTTCAAGAGCTTCCTGCGCGA...GGGTGTCATTGCCATTGACCGGAGAAGCAGATGAGTGACATTCAGGAATGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | CCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACAATCATTCCTGAAGGCAGGGCTCCTGCCTaGGAAGGTTTCCTGGACCGA | + |
Preference number: 5 (lower is better) Translates to: PSLSVIICLGSGVTIIPEGRAPA*EGFLDR Trigger: TCGGTCCAGGAAACCTTCCAAGGCAGGAGCCCTGCC...TTCAGGAATGATTGTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | TGCCTCAGAAAATACTGTGCCTTCCTGTGCCCTGACCCCTGGCTGGCTCAGGAGACTCTTCTCTCTCCTTaGAGGTGTGGATTTTCTCAT | + |
Preference number: 5 (lower is better) Translates to: CLRKYCAFLCPDPWLAQETLLSP*RCGFSH Trigger: ATGAGAAAATCCACACCTCAAAGGAGAGAGAAGAGT...CTCCTGAGCCAGCCAGGGGTCAGGGCACAGGAAGGCACAGTATTTTCTGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGACACCTGCCTCTGGCTaGAGCAGCCTCTGGCTCCGG | + |
Preference number: 5 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKTPASG*SSLWLR Trigger: CCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGT...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | GTGAGTTCCGGCACTTCCATGAATTGCCTCCCTTTGACGCGTCCTTTCCCTTTCACTTCCATGGCTCTCTaGCTCCACAAAGTCATTCAG | + |
Preference number: 5 (lower is better) Translates to: VSSGTSMNCLPLTRPFPFTSMAL*LHKVIQ Trigger: CTGAATGACTTTGTGGAGCAAGAGAGCCATGGAAGT...GAAAGGGAAAGGACGCGTCAAAGGGAGGCAATTCATGGAAGTGCCGGAACTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | ACAGAAAACAAAACCGAGTCTGAGTGTTATCATTTGTCTAGGGAGTGGAGTCACACAGACCTTCGGAACTaGAGGGCAGGGAAGGGCTCT | + |
Preference number: 5 (lower is better) Translates to: TENKTESECYHLSREWSHTDLRN*RAGKGS Trigger: AGAGCCCTTCCCTGCCCTCAAGTTCCGAAGGTCTGT...GTGACTCCACTCCCTAGACAAATGATAACACTCAGACTCGGTTTTGTTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCGTTCCGGGAGATTCTTaGGGTCCACTGCTGCTCTCC | + |
Preference number: 5 (lower is better) Translates to: LYLAASQSSDAFNTYCFPVPGDS*GPLLLS Trigger: GGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAAC...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | AGATGTTACACTCTCCAGCAACAATTTTATTTCACTGGCTGGACTTGCCAAAAGCTTTGCACTAGCAATTaGATGACTCCCTGGTGCCCG | + |
Preference number: 5 (lower is better) Translates to: RCYTLQQQFYFTGWTCQKLCTSN*MTPWCP Trigger: CGGGCACCAGGGAGTCATCAAATTGCTAGTGCAAAG...CTTTTGGCAAGTCCAGCCAGTGAAATAAAATTGTTGCTGGAGAGTGTAACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS-3UTR CAA 90 bp | TTATACTTAGCAGCTTCACAAAGTTCTGATGCTTTTAACACTTACTGCTTCCCCCAGATCCATCCCTGCTaGGGATCCATGAAGAGTGTG | + |
Preference number: 5 (lower is better) Translates to: LYLAASQSSDAFNTYCFPQIHPC*GSMKSV Trigger: CACACTCTTCATGGATCCCAAGCAGGGATGGATCTG...GGGGAAGCAGTAAGTGTTAAAAGCATCAGAACTTTGTGAAGCTGCTAAGTATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | CGCGCTGCCACCTACGTCCACCTGGGTCCCCGCACCTaGCGGCGGCTTCTGCGGCTCCGGGTCACGGCGGCG | + |
Preference number: 6 (lower is better) Translates to: RAATYVHLGPRT*RRLLRLRVTAA Trigger: CGCCGCCGTGACCCGGAGCCGCAGAAGCCGCCGGCAGGTGCGGGGACCCAGGTGGACGTAGGTGGCAGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | CCGGGCTGGGGTCTGGCCCGGCCACCTTCTGCGCGCTaGCACCTACGTCCACCTGGGTCCCCGCACCTGCCG | + |
Preference number: 6 (lower is better) Translates to: PGWGLARPPSAR*HLRPPGSPHLP Trigger: CGGCAGGTGCGGGGACCCAGGTGGACGTAGGTGGCAGCGCGCAGAAGGTGGCCGGGCCAGACCCCAGCCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CCGGCCACCTTCTGCGCGCTGCCACCTACGTCCACCTaGGTCCCCGCACCTGCCGGCGGCTTCTGCGGCTCC | + |
Preference number: 6 (lower is better) Translates to: PATFCALPPTST*VPAPAGGFCGS Trigger: GGAGCCGCAGAAGCCGCCGGCAGGTGCGGGGACCCAGGTGGACGTAGGTGGCAGCGCGCAGAAGGTGGCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | CTGTCCTCCGGGCTGGGGTCTGGCCCGGCCACCTTCTaGGCGCTGCCACCTACGTCCACCTGGGTCCCCGCA | + |
Preference number: 6 (lower is better) Translates to: LSSGLGSGPATF*ALPPTSTWVPA Trigger: TGCGGGGACCCAGGTGGACGTAGGTGGCAGCGCGCAGAAGGTGGCCGGGCCAGACCCCAGCCCGGAGGACAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | CAGCCACCCCGGAGCTCCGAGGTCATCCCGGGCAGGTaGAGCGCGCTCCGGCTTCTCGCAGGCGACTGCAGG | + |
Preference number: 6 (lower is better) Translates to: QPPRSSEVIPGR*SALRLLAGDCR Trigger: CCTGCAGTCGCCTGCGAGAAGCCGGAGCGCGCTGCACCTGCCCGGGATGACCTCGGAGCTCCGGGGTGGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | GTCGGAGGCCAGACAGGCGGTACAGATCCAGGCGCGTaGTCGGCGGCCTCTCCTTCCCTCAGCCACCCCGGA | + |
Preference number: 6 (lower is better) Translates to: VGGQTGGTDPGA*SAASPSLSHPG Trigger: TCCGGGGTGGCTGAGGGAAGGAGAGGCCGCCGAGCACGCGCCTGGATCTGTACCGCCTGTCTGGCCTCCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | TGTCCTCTGGTTCGGGCTGTCCTCCGGGCTGGGGTCTaGCCCGGCCACCTTCTGCGCGCTGCCACCTACGTC | + |
Preference number: 6 (lower is better) Translates to: CPLVRAVLRAGV*PGHLLRAATYV Trigger: GACGTAGGTGGCAGCGCGCAGAAGGTGGCCGGGCCAGACCCCAGCCCGGAGGACAGCCCGAACCAGAGGACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | CCTCGCGTCCCCACAGCCGCACACCTGCCTCTGGCTTaGGCAGCCTCTGGCTCCGGTGTCCTCTGGTTCGGG | + |
Preference number: 6 (lower is better) Translates to: PRVPTAAHLPLA*AASGSGVLWFG Trigger: CCCGAACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTGGGGACGCGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | AGCGGCTGTCCGGTGGACTGTCCCCAGCCGTTCTGCTaGCACTCCCAGCAGCAGCGTCCTCGCGTCCCCACA | + |
Preference number: 6 (lower is better) Translates to: SGCPVDCPQPFC*HSQQQRPRVPT Trigger: TGTGGGGACGCGAGGACGCTGCTGCTGGGAGTGCCAGCAGAACGGCTGGGGACAGTCCACCGGACAGCCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CACAGCCGCACACCTGCCTCTGGCTTGAGCAGCCTCTaGCTCCGGTGTCCTCTGGTTCGGGCTGTCCTCCGG | + |
Preference number: 6 (lower is better) Translates to: HSRTPASGLSSL*LRCPLVRAVLR Trigger: CCGGAGGACAGCCCGAACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | AGCGTCCTCGCGTCCCCACAGCCGCACACCTGCCTCTaGCTTGAGCAGCCTCTGGCTCCGGTGTCCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: SVLASPQPHTCL*LEQPLAPVSSG Trigger: ACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTGGGGACGCGAGGACGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CAGCATCCACCCTTGGGCTGGGCAGGGCTCCTGCCTTaGAAGGTTTCCTGGACCGAGGTGGGCGCCGACTCC | + |
Preference number: 6 (lower is better) Translates to: QHPPLGWAGLLP*KVSWTEVGADS Trigger: GGAGTCGGCGCCCACCTCGGTCCAGGAAACCTTCCAAGGCAGGAGCCCTGCCCAGCCCAAGGGTGGATGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | TCCTGGCGCACTGCGGCCACCGAGTTCACGAAGCCCTaGAAGCGCTCGCGACGCTCCTGCAGCTGGCCTGGA | + |
Preference number: 6 (lower is better) Translates to: SWRTAATEFTKP*KRSRRSCSWPG Trigger: TCCAGGCCAGCTGCAGGAGCGTCGCGAGCGCTTCAAGGGCTTCGTGAACTCGGTGGCCGCAGTGCGCCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | TCCTCGCGTCCCCACAGCCGCACACCTGCCTCTGGCTaGAGCAGCCTCTGGCTCCGGTGTCCTCTGGTTCGG | + |
Preference number: 6 (lower is better) Translates to: SSRPHSRTPASG*SSLWLRCPLVR Trigger: CCGAACCAGAGGACACCGGAGCCAGAGGCTGCTCAAGCCAGAGGCAGGTGTGCGGCTGTGGGGACGCGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | CGCTCGCGACGCTCCTGCAGCTGGCCTGGAGACACGTaGGGGTCGCGCAGGAAGCTCTTGAAGTGGCTCAGC | + |
Preference number: 6 (lower is better) Translates to: RSRRSCSWPGDT*GSRRKLLKWLS Trigger: GCTGAGCCACTTCAAGAGCTTCCTGCGCGACCCTCACGTGTCTCCAGGCCAGCTGCAGGAGCGTCGCGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | GGCCCTCCTCCCCCAGTAGGTCCCTGTACCTCCTCTTaGGCACCACGTACTTGGTGCCGTCGGGGTCCTGGC | + |
Preference number: 6 (lower is better) Translates to: GPPPPVGPCTSS*APRTWCRRGPG Trigger: GCCAGGACCCCGACGGCACCAAGTACGTGGTGCTCAAGAGGAGGTACAGGGACCTACTGGGGGAGGAGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CAGGGTCTCCGAGATCTTCTGGCAGCGGCTGTCCGGTaGACTGTCCCCAGCCGTTCTGCTGGCACTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: QGLRDLLAAAVR*TVPSRSAGTPS Trigger: GCTGGGAGTGCCAGCAGAACGGCTGGGGACAGTCCACCGGACAGCCGCTGCCAGAAGATCTCGGAGACCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | GGAGGAAGTTGTCTGGCAACACCGACCAGGCGCGAGTaGGCGCCTGGATCTCGGGCTCAGGCACCTGCAGGT | + |
Preference number: 6 (lower is better) Translates to: GGSCLATPTRRE*APGSRAQAPAG Trigger: ACCTGCAGGTGCCTGAGCCCGAGATCCAGGCGCCCACTCGCGCCTGGTCGGTGTTGCCAGACAACTTCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | TCCTCCCCCAGTAGGTCCCTGTACCTCCTCTTGAGCACCACGTACTaGGTGCCGTCGGGGTCCTGGCGCACTGCGGCCACCGAGTTCACG | + |
Preference number: 6 (lower is better) Translates to: SSPSRSLYLLLSTTY*VPSGSWRTAATEFT Trigger: CGTGAACTCGGTGGCCGCAGTGCGCCAGGACCCCGACGGCACCAAGTACGTGGTGCTCAAGAGGAGGTACAGGGACCTACTGGGGGAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | CAAAACAGCATCCACCCTTGGGCTGGGCAGGGCTCCTaGCTTGGAAGGTTTCCTGGACCGAGGTGGGCGCCG | + |
Preference number: 6 (lower is better) Translates to: QNSIHPWAGQGS*LGRFPGPRWAP Trigger: CGGCGCCCACCTCGGTCCAGGAAACCTTCCAAGGCAGGAGCCCTGCCCAGCCCAAGGGTGGATGCTGTTTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | TTGTCTGGCAACACCGACCAGGCGCGAGTGGGCGCCTaGATCTCGGGCTCAGGCACCTGCAGGTATCTGGCT | + |
Preference number: 6 (lower is better) Translates to: LSGNTDQARVGA*ISGSGTCRYLA Trigger: AGCCAGATACCTGCAGGTGCCTGAGCCCGAGATCCAGGCGCCCACTCGCGCCTGGTCGGTGTTGCCAGACAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | AGTAGGTCCCTGTACCTCCTCTTGAGCACCACGTACTaGGTGCCGTCGGGGTCCTGGCGCACTGCGGCCACC | + |
Preference number: 6 (lower is better) Translates to: SRSLYLLLSTTY*VPSGSWRTAAT Trigger: GGTGGCCGCAGTGCGCCAGGACCCCGACGGCACCAAGTACGTGGTGCTCAAGAGGAGGTACAGGGACCTACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | GTCTCCGAGACCCCAAAGGCGGTTTCTGAAGGTAGCTGGAGGAAGTaGTCTGGCAACACCGACCAGGCGCGAGTGGGCGCCTGGATCTCG | + |
Preference number: 6 (lower is better) Translates to: VSETPKAVSEGSWRK*SGNTDQARVGAWIS Trigger: CGAGATCCAGGCGCCCACTCGCGCCTGGTCGGTGTTGCCAGACAACTTCCTCCAGCTACCTTCAGAAACCGCCTTTGGGGTCTCGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | GGGCTCAGGCACCTGCAGGTATCTGGCTACCCACTCTaGAGTGCGCTGGTGCTGTTGCTGCAGCTGCTGGGT | + |
Preference number: 6 (lower is better) Translates to: GLRHLQVSGYPL*SALVLLLQLLG Trigger: ACCCAGCAGCTGCAGCAACAGCACCAGCGCACTCAAGAGTGGGTAGCCAGATACCTGCAGGTGCCTGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | TTGAGTGCGCTGGTGCTGTTGCTGCAGCTGCTGGGTTaGATGGTTCGGGGAGCCGGCGGTAAACAGCTCCAG | + |
Preference number: 6 (lower is better) Translates to: LSALVLLLQLLG*MVRGAGGKQLQ Trigger: CTGGAGCTGTTTACCGCCGGCTCCCCGAACCATTCAACCCAGCAGCTGCAGCAACAGCACCAGCGCACTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | GGCTCAGGCACCTGCAGGTATCTGGCTACCCACTCTTaGGTGCGCTGGTGCTGTTGCTGCAGCTGCTGGGTT | + |
Preference number: 6 (lower is better) Translates to: GSGTCRYLATHS*VRWCCCCSCWV Trigger: AACCCAGCAGCTGCAGCAACAGCACCAGCGCACTCAAGAGTGGGTAGCCAGATACCTGCAGGTGCCTGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CAGGGCTCCTGCCTTGGAAGGTTTCCTGGACCGAGGTaGGCGCCGACTCCTTTTCCACAAGTCCTCATCAGG | + |
Preference number: 6 (lower is better) Translates to: QGSCLGRFPGPR*APTPFPQVLIR Trigger: CCTGATGAGGACTTGTGGAAAAGGAGTCGGCGCCCACCTCGGTCCAGGAAACCTTCCAAGGCAGGAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | GGTTGCAGCCCCTCTTCGGGGGTTCCGGGAGATTCTTaGGGTCCACTGCTGCTCTCCTCACTTCCATGGCTC | + |
Preference number: 6 (lower is better) Translates to: GCSPSSGVPGDS*GPLLLSSLPWL Trigger: GAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAACCCCCGAAGAGGGGCTGCAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | CCTGTTCGAGAGCTCCTCCTGACAGACCTTCGGAACTaGAGGGCAGGGAAGGGCTCTTGGGGGTGGTCTCCA | + |
Preference number: 6 (lower is better) Translates to: PVRELLLTDLRN*RAGKGSWGWSP Trigger: TGGAGACCACCCCCAAGAGCCCTTCCCTGCCCTCAAGTTCCGAAGGTCTGTCAGGAGGAGCTCTCGAACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | GCTCCTCCTGACAGACCTTCGGAACTTGAGGGCAGGGAAGGGCTCTaGGGGGTGGTCTCCAAGGCTTTTAGCCACTGTTGGGACCTTCCG | + |
Preference number: 6 (lower is better) Translates to: APPDRPSELEGREGL*GVVSKAFSHCWDLP Trigger: CGGAAGGTCCCAACAGTGGCTAAAAGCCTTGGAGACCACCCCCAAGAGCCCTTCCCTGCCCTCAAGTTCCGAAGGTCTGTCAGGAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | GCCAGCTGGGGGTCCTCCCAGAACAAAGTCAGCACGTaGAGCCAGGAACCACTGGCAAGCCTCACAATCCAC | + |
Preference number: 6 (lower is better) Translates to: ASWGSSQNKVST*SQEPLASLTIH Trigger: GTGGATTGTGAGGCTTGCCAGTGGTTCCTGGCTTCACGTGCTGACTTTGTTCTGGGAGGACCCCCAGCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | GTCTCCGAGACCCCAAAGGCGGTTTCTGAAGGTAGCTaGAGGAAGTTGTCTGGCAACACCGACCAGGCGCGA | + |
Preference number: 6 (lower is better) Translates to: VSETPKAVSEGS*RKLSGNTDQAR Trigger: TCGCGCCTGGTCGGTGTTGCCAGACAACTTCCTCCAGCTACCTTCAGAAACCGCCTTTGGGGTCTCGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | GTTGCAGCCCCTCTTCGGGGGTTCCGGGAGATTCTTTaGGTCCACTGCTGCTCTCCTCACTTCCATGGCTCT | + |
Preference number: 6 (lower is better) Translates to: VAAPLRGFREIL*VHCCSPHFHGS Trigger: AGAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAACCCCCGAAGAGGGGCTGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | CTCAAGACAGGTTGCAGCCCCTCTTCGGGGGTTCCGGGAGATTCTTaGGGTCCACTGCTGCTCTCCTCACTTCCATGGCTCTCTTGCTCC | + |
Preference number: 6 (lower is better) Translates to: LKTGCSPSSGVPGDS*GPLLLSSLPWLSCS Trigger: GGAGCAAGAGAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAGAATCTCCCGGAACCCCCGAAGAGGGGCTGCAACCTGTCTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | TCCGAGGTCCCGCCGGATCAGGCAAGGGCTGTCGTTTaGTGGCAAAAACAGATCCTCAACTGGATCCCTGAG | + |
Preference number: 6 (lower is better) Translates to: SEVPPDQARAVV*WQKQILNWIPE Trigger: CTCAGGGATCCAGTTGAGGATCTGTTTTTGCCACCAAACGACAGCCCTTGCCTGATCCGGCGGGACCTCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CCAATTTCTGTACCAAAACAGCATCCACCCTTGGGCTaGGCAGGGCTCCTGCCTTGGAAGGTTTCCTGGACC | + |
Preference number: 6 (lower is better) Translates to: PISVPKQHPPLG*AGLLPWKVSWT Trigger: GGTCCAGGAAACCTTCCAAGGCAGGAGCCCTGCCCAGCCCAAGGGTGGATGCTGTTTTGGTACAGAAATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | GTCTGTGGGGTATCAAGGCTGCAGATCCATCCCTGCTaGGGATCCATGAAGAGTGTGGCTGACTGGCCACAG | + |
Preference number: 6 (lower is better) Translates to: VCGVSRLQIHPC*GSMKSVADWPQ Trigger: CTGTGGCCAGTCAGCCACACTCTTCATGGATCCCAAGCAGGGATGGATCTGCAGCCTTGATACCCCACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CCCAGAACAAAGTCAGCACGTGAAGCCAGGAACCACTaGCAAGCCTCACAATCCACTCATGCTCCCTGGTGT | + |
Preference number: 6 (lower is better) Translates to: PRTKSAREARNH*QASQSTHAPWC Trigger: ACACCAGGGAGCATGAGTGGATTGTGAGGCTTGCCAGTGGTTCCTGGCTTCACGTGCTGACTTTGTTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | GGGTCCACTGCTGCTCTCCTCACTTCCATGGCTCTCTaGCTCCACAAAGTCATTCAGATCCTGGAGGGACAG | + |
Preference number: 6 (lower is better) Translates to: GSTAALLTSMAL*LHKVIQILEGQ Trigger: CTGTCCCTCCAGGATCTGAATGACTTTGTGGAGCAAGAGAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | GGGCTCCAGAGACCAAATCCTGAAGGGCACACAGGTCACCATGCTTaGCTATCCAGTGCAAGGCTGTGTACCCAGTCAGGAAGTCTCTGT | + |
Preference number: 6 (lower is better) Translates to: GLQRPNPEGHTGHHA*LSSARLCTQSGSLC Trigger: ACAGAGACTTCCTGACTGGGTACACAGCCTTGCACTGGATAGCAAAGCATGGTGACCTGTGTGCCCTTCAGGATTTGGTCTCTGGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CCA 72 bp | CGTTTCCCCAGAGACGTTACTGTTCAGATACTGCCATaGCTTCTTGCCACTGCAGTCCCGAATGTTCACCCG | + |
Preference number: 6 (lower is better) Translates to: RFPRDVTVQILP*LLATAVPNVHP Trigger: CGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACGTCTCTGGGGAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | CACGTTTCCCCAGAGACGTTACTGTTCAGATACTGCCATGGCTTCTaGCCACTGCAGTCCCGAATGTTCACCCGAGAAGCCAGTCTTTGC | + |
Preference number: 6 (lower is better) Translates to: HVSPETLLFRYCHGF*PLQSRMFTREASLC Trigger: GCAAAGACTGGCTTCTCGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACGTCTCTGGGGAAACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | TATCAAGGCTGCAGATCCATCCCTGCTTGGGATCCATaGAGAGTGTGGCTGACTGGCCACAGCATTAGCATC | + |
Preference number: 6 (lower is better) Translates to: YQGCRSIPAWDP*RVWLTGHSISI Trigger: GATGCTAATGCTGTGGCCAGTCAGCCACACTCTTCATGGATCCCAAGCAGGGATGGATCTGCAGCCTTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | GGGCGCCGACTCCTTTTCCACAAGTCCTCATCAGGATaGTCCTCGTCTGAGGAAGAAGGAGATTTGGTTCTT | + |
Preference number: 6 (lower is better) Translates to: GRRLLFHKSSSG*SSSEEEGDLVL Trigger: AAGAACCAAATCTCCTTCTTCCTCAGACGAGGAGCATCCTGATGAGGACTTGTGGAAAAGGAGTCGGCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | CAGAGACGTTACTGTTCAGATACTGCCATGGCTTCTTaGCACTGCAGTCCCGAATGTTCACCCGAGAAGCCA | + |
Preference number: 6 (lower is better) Translates to: QRRYCSDTAMAS*HCSPECSPEKP Trigger: TGGCTTCTCGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACGTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | AGATTCTTTGGGTCCACTGCTGCTCTCCTCACTTCCATGGCTCTCTaGCTCCACAAAGTCATTCAGATCCTGGAGGGACAGCTGACAACG | + |
Preference number: 6 (lower is better) Translates to: RFFGSTAALLTSMAL*LHKVIQILEGQLTT Trigger: CGTTGTCAGCTGTCCCTCCAGGATCTGAATGACTTTGTGGAGCAAGAGAGCCATGGAAGTGAGGAGAGCAGCAGTGGACCCAAAGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 90 bp | CACAAGTCCTCATCAGGATGCTCCTCGTCTGAGGAAGAAGGAGATTaGGTTCTTCCTGTTCGAGAGCTCCTCCTGACAGACCTTCGGAAC | + |
Preference number: 6 (lower is better) Translates to: HKSSSGCSSSEEEGD*VLPVRELLLTDLRN Trigger: GTTCCGAAGGTCTGTCAGGAGGAGCTCTCGAACAGGAAGAACCAAATCTCCTTCTTCCTCAGACGAGGAGCATCCTGATGAGGACTTGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | GATCCATCCCTGCTTGGGATCCATGAAGAGTGTGGCTaGCTGGCCACAGCATTAGCATCTGCCAATTTCTGT | + |
Preference number: 6 (lower is better) Translates to: DPSLLGIHEECG*LATALASANFC Trigger: ACAGAAATTGGCAGATGCTAATGCTGTGGCCAGTCAGCCACACTCTTCATGGATCCCAAGCAGGGATGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | AGCCACAACTGGACCTCACATTTACATCTAGTGCAATaGCCGCCTTCTGGGCTCCAGAGACCAAATCCTGAA | + |
Preference number: 6 (lower is better) Translates to: SHNWTSHLHLVQ*PPSGLQRPNPE Trigger: TTCAGGATTTGGTCTCTGGAGCCCAGAAGGCGGGCATTGCACTAGATGTAAATGTGAGGTCCAGTTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS GCA 72 bp | CGTTACTGTTCAGATACTGCCATGGCTTCTTGCCACTaGAGTCCCGAATGTTCACCCGAGAAGCCAGTCTTT | + |
Preference number: 6 (lower is better) Translates to: RYCSDTAMASCH*SPECSPEKPVF Trigger: AAAGACTGGCTTCTCGGGTGAACATTCGGGACTGCAGTGGCAAGAAGCCATGGCAGTATCTGAACAGTAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS CAA 72 bp | TCATCAGGATGCTCCTCGTCTGAGGAAGAAGGAGATTaGGTTCTTCCTGTTCGAGAGCTCCTCCTGACAGAC | + |
Preference number: 6 (lower is better) Translates to: SSGCSSSEEEGD*VLPVRELLLTD Trigger: GTCTGTCAGGAGGAGCTCTCGAACAGGAAGAACCAAATCTCCTTCTTCCTCAGACGAGGAGCATCCTGATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | CCTTTTCCACAAGTCCTCATCAGGATGCTCCTCGTCTaGGGAAGAAGGAGATTTGGTTCTTCCTGTTCGAGA | + |
Preference number: 6 (lower is better) Translates to: PFPQVLIRMLLV*GRRRFGSSCSR Trigger: TCTCGAACAGGAAGAACCAAATCTCCTTCTTCCTCAGACGAGGAGCATCCTGATGAGGACTTGTGGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |
||
CDS TCA 72 bp | TTCTCATATTGGCTGGCCAATTTCCATTTGTTGTGCTaGGTTTTGAGCAAAGCAGCCAAGGAAGTCTTCCGG | + |
Preference number: 6 (lower is better) Translates to: FSYWLANFHLLC*VLSKAAKEVFR Trigger: CCGGAAGACTTCCTTGGCTGCTTTGCTCAAAACTCAGCACAACAAATGGAAATTGGCCAGCCAATATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061328.6 |