Pregenerated sensors for SOSTDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036169Ensembl transcript IDs: ENSMUST00000041407.7
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACTACAGGATGCCTGGCTTTCACTGCAAACTACTCATTACATCTTaGGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCT | + |
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Preference number: 1 (lower is better) Translates to: NYRMPGFHCKLLITS*DTCKGKASPREGQP Trigger: AGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR GCA 90 bp | TTTAAAGAAATGACTGGGATGGGGGAGGGGATGGAAACTACAGGATaGCTGGCTTTCACTGCAAACTACTCATTACATCTTGAGACACTT | + |
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Preference number: 1 (lower is better) Translates to: FKEMTGMGEGMETTG*LAFTANYSLHLETL Trigger: AAGTGTCTCAAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTTTCCATCCCCTCCCCCATCCCAGTCATTTCTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR CCA 90 bp | CAAATAAATAACCGGCTTTACCTATTAGCTGCTGCCATGAATTGCTaGCATTCCACTCCCAGAGAGGTCAACATTCAGGGGGATAATTTC | + |
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Preference number: 1 (lower is better) Translates to: QINNRLYLLAAAMNC*HSTPREVNIQGDNF Trigger: GAAATTATCCCCCTGAATGTTGACCTCTCTGGGAGTGGAATGCCAGCAATTCATGGCAGCAGCTAATAGGTAAAGCCGGTTATTTATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR-3UTR GCA 90 bp | GGGATGGAAACTACAGGATGCCTGGCTTTCACTGCAAACTACTCATTACATCTTAATCTGGGTAGCAGATaGTTTCTAGTCAGTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GMETTGCLAFTANYSLHLNLGSR*FLVSPG Trigger: ACCTGGACTGACTAGAAAGCATCTGCTACCCAGATT...AAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTTTCCATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAGTGAAATGTCACAAGGTTTGCCTCTCTTTCAAAACTAACCCCTGGCTGGCATATACTTTCAAGTaGGGAAAGAGCAATGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FEVKCHKVCLSFKTNPWLAYTFK*GKSNGR Trigger: CCTGCCATTGCTCTTTCCTCACTTGAAAGTATATGC...CAGCCAGGGGTTAGTTTTGAAAGAGAGGCAAACCTTGTGACATTTCACTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR CCA 72 bp | AACCGGCTTTACCTATTAGCTGCTGCCATGAATTGCTaGCATTCCACTCCCAGAGAGGTCAACATTCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: NRLYLLAAAMNC*HSTPREVNIQG Trigger: CCCCTGAATGTTGACCTCTCTGGGAGTGGAATGCCAGCAATTCATGGCAGCAGCTAATAGGTAAAGCCGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR GCA 72 bp | ATGACTGGGATGGGGGAGGGGATGGAAACTACAGGATaGCTGGCTTTCACTGCAAACTACTCATTACATCTT | + |
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Preference number: 3 (lower is better) Translates to: MTGMGEGMETTG*LAFTANYSLHL Trigger: AAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTTTCCATCCCCTCCCCCATCCCAGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR-3UTR CAA 90 bp | GGGATGGAAACTACAGGATGCCTGGCTTTCACTGCAAACTACTCATTACATCTTGACAGCCTGCTGGGCTaGATCAAAGCAGAAAGCATA | + |
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Preference number: 3 (lower is better) Translates to: GMETTGCLAFTANYSLHLDSLLG*IKAESI Trigger: TATGCTTTCTGCTTTGATCAAGCCCAGCAGGCTGTC...AAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTTTCCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR GCA 72 bp | AATAACCGGCTTTACCTATTAGCTGCTGCCATGAATTaGTGGCATTCCACTCCCAGAGAGGTCAACATTCAG | + |
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Preference number: 3 (lower is better) Translates to: NNRLYLLAAAMN*WHSTPREVNIQ Trigger: CTGAATGTTGACCTCTCTGGGAGTGGAATGCCAGCAATTCATGGCAGCAGCTAATAGGTAAAGCCGGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR CCA 72 bp | GCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCAATaGCAGGCTCGAGAGAGAGTCTTCCAAGCAATCAAA | + |
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Preference number: 3 (lower is better) Translates to: AESIYFQVRKEQ*QARERVFQAIK Trigger: TTTGATTGCTTGGAAGACTCTCTCTCGAGCCTGCCATTGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| 3UTR TCA 72 bp | ATGCCTGGCTTTCACTGCAAACTACTCATTACATCTTaGGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: MPGFHCKLLITS*DTCKGKASPRE Trigger: TTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | AGCAATGGCAGGCTCGAGAGAGAGTCTTCCAAGCAATCAAATCTGGGTAGCAGACGCTCTCTGTGGTGCTaGGCGGGCTTGGCGGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: SNGRLERESSKQSNLGSRRSLWC*AGLAGD Trigger: GTCGCCCGCCAAGCCCGCCCAGCACCACAGAGAGCG...TCTGCTACCCAGATTTGATTGCTTGGAAGACTCTCTCTCGAGCCTGCCATTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | TTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCTGTTCCGCTCTCTGTGGTaGTGGGCGGGCTTGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LHLETLAKEKLVPEKDSLFRSLW*WAGLAG Trigger: GCCCGCCAAGCCCGCCCAGCACCACAGAGAGCGGAA...CAGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR TCA 90 bp | GCAATGGCAGGCTCGAGAGAGAGTCTTCCAAGCAATCAAATCTGGGTAGCAGATTGCGCGTCTTGTCGTTaGCACACCGCCACTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: AMAGSRESLPSNQIWVADCASCR*HTATPE Trigger: CTCAGGAGTGGCGGTGTGTCAACGACAAGACGCGCA...ATCTGCTACCCAGATTTGATTGCTTGGAAGACTCTCTCTCGAGCCTGCCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | AGCAATGGCAGGCTCGAGAGAGAGTCTTCCAAGCAATCAAATCTGGGTAGCAGAGATTCAGGGTGCTGTTaGTGCTGGGGTGTGCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: SNGRLERESSKQSNLGSRDSGCC*CWGVPG Trigger: TCCCGGCACACCCCAGCAGCAACAGCACCCTGAATC...TCTGCTACCCAGATTTGATTGCTTGGAAGACTCTCTCTCGAGCCTGCCATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR TCA 90 bp | CTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCTGCTGGGCTTGATCAAACTGGACTCGTTGTGCTaGCGGGTGTACCTCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LAKEKLVPEKDSLLGLIKLDSLC*RVYLLH Trigger: GTGCAAGAGGTACACCCGTCAGCACAACGAGTCCAG...TTTGATCAAGCCCAGCAGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | TTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCTGGGGTGCTGTTGCTGCTaGGGTGTGCCGGGACAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LHLETLAKEKLVPEKDSLGCCCC*GVPGQV Trigger: AACCTGTCCCGGCACACCCCAGCAGCAACAGCACCC...CAGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR TCA 90 bp | ATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCAATGGCAGGCTCGAACACACCGCCACTCCTaGGAGCTCCTCCGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IKAESIYFQVRKEQWQARTHRHS*ELLRLQ Trigger: CTGGAGCCGGAGGAGCTCTCAGGAGTGGCGGTGTGT...TCGAGCCTGCCATTGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR TCA 90 bp | TTTGAAGTGAAATGTCACAAGGTTTGCCTCTCTTTCAAAACTAACCCCTGGCTGCGCGTGCTGCCGTCCTaGCACTGCAGCTGGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: FEVKCHKVCLSFKTNPWLRVLPS*HCSWIL Trigger: GAGGATCCAGCTGCAGTGTCAGGACGGCAGCACGCG...CAGCCAGGGGTTAGTTTTGAAAGAGAGGCAAACCTTGTGACATTTCACTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | ATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCAATGGCAGGCTCGACTCTTCCGCTCTCTGTaGTGCTGGGCGGGCTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: IKAESIYFQVRKEQWQARLFRSL*CWAGLA Trigger: CGCCAAGCCCGCCCAGCACCACAGAGAGCGGAAGAG...TCGAGCCTGCCATTGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | TTTGAAGTGAAATGTCACAAGGTTTGCCTCTCTTTCAAAACTAACCCCTGGCTGTCAGGGTGCTGTTGCTaGTGGGGTGTGCCGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: FEVKCHKVCLSFKTNPWLSGCCC*WGVPGQ Trigger: CTGTCCCGGCACACCCCAGCAGCAACAGCACCCTGA...CAGCCAGGGGTTAGTTTTGAAAGAGAGGCAAACCTTGTGACATTTCACTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | CTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCTGCTGGGCTTGATCAAAGCTTGCTGGATTTGCTaGCTCTCTTCCGCTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LAKEKLVPEKDSLLGLIKACWIC*LSSALC Trigger: ACAGAGAGCGGAAGAGAGCCAGCAAATCCAGCAAGC...TTTGATCAAGCCCAGCAGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | AGCAATGGCAGGCTCGAGAGAGAGTCTTCCAAGCAATCAAATCTGGGTAGCAGAAGCTCAGACTGTGCTTaGTGGATTTGCTGGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SNGRLERESSKQSNLGSRSSDCA*WICWLS Trigger: AGAGAGCCAGCAAATCCAGCAAGCACAGTCTGAGCT...TCTGCTACCCAGATTTGATTGCTTGGAAGACTCTCTCTCGAGCCTGCCATTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | TTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCTGGCCTGCCTCCATTCCTaGCTTGATTCAGGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LHLETLAKEKLVPEKDSLACLHS*LDSGCC Trigger: ACAGCACCCTGAATCAAGCCAGGAATGGAGGCAGGC...CAGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR TCA 90 bp | GGGATGGAAACTACAGGATGCCTGGCTTTCACTGCAAACTACTCATTACATCTTCCAGTCCAGTGCTACTaGAATGCCTGCCTCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: GMETTGCLAFTANYSLHLPVQCY*NACLHS Trigger: GGAATGGAGGCAGGCATTTCAGTAGCACTGGACTGG...AAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTTTCCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | TTTGAAGTGAAATGTCACAAGGTTTGCCTCTCTTTCAAAACTAACCCCTGGCTGGTTGCTGCTGGGGTGTaGCGGGACAGGTTTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: FEVKCHKVCLSFKTNPWLVAAGV*RDRFNH Trigger: GTGGTTAAACCTGTCCCGGCACACCCCAGCAGCAAC...CAGCCAGGGGTTAGTTTTGAAAGAGAGGCAAACCTTGTGACATTTCACTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | CCTGCTGGGCTTGATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCATTTTGTAGGTGCGCGTaGTGCCGTCCTGACACTGCA | + |
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Preference number: 4 (lower is better) Translates to: PAGLDQSRKHILSSEERAFCRCA*CRPDTA Trigger: TGCAGTGTCAGGACGGCAGCACGCGCACCTACAAAA...TGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGATCAAGCCCAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | ATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCAATGGCAGGCTCGATGCAGCTGGATCCTCTaGGTGCGCGTCTTGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: IKAESIYFQVRKEQWQARCSWIL*VRVLSL Trigger: CAACGACAAGACGCGCACCCAGAGGATCCAGCTGCA...TCGAGCCTGCCATTGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | CCTGCTGGGCTTGATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCACCAGTGCTACTGAAATaGCTGCCTCCATTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PAGLDQSRKHILSSEERAPVLLK*LPPFLA Trigger: AGCCAGGAATGGAGGCAGGCATTTCAGTAGCACTGG...TGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGATCAAGCCCAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | AACTACTCATTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGTGGACCGCAGTTCCCTaGAGCCCACTTGAACTCGAC | + |
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Preference number: 4 (lower is better) Translates to: NYSLHLETLAKEKLVPEKWTAVP*SPLELD Trigger: GTCGAGTTCAAGTGGGCTGCAGGGAACTGCGGTCCA...CTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAATGAGTAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | GGGATGGAAACTACAGGATGCCTGGCTTTCACTGCAAACTACTCATTACATCTTTGTGCTTGCTGGATTTaGTGGCTCTCTTCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GMETTGCLAFTANYSLHLCACWI*WLSSAL Trigger: GAGAGCGGAAGAGAGCCAGCAAATCCAGCAAGCACA...AAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTTTCCATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | GGGATGGAAACTACAGGATGCCTGGCTTTCACTGCAAACTACTCATTACATCTTCCGAAATGTATTTGGTaGACCGCAGTTCCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GMETTGCLAFTANYSLHLPKCIW*TAVPCS Trigger: GCTGCAGGGAACTGCGGTCCACCAAATACATTTCGG...AAGATGTAATGAGTAGTTTGCAGTGAAAGCCAGGCATCCTGTAGTTTCCATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | TTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCTGTCAGACTGTGCTTGCTaGATTTGCTGGCTCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LHLETLAKEKLVPEKDSLSDCAC*ICWLSS Trigger: GGAAGAGAGCCAGCAAATCCAGCAAGCACAGTCTGA...CAGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR GCA 90 bp | AACTACTCATTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGTGGCTTGATTCAGGGTaGTGTTGCTGCTGGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NYSLHLETLAKEKLVPEKWLDSG*CCCWGV Trigger: CACACCCCAGCAGCAACAGCACCCTGAATCAAGCCA...CTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAATGAGTAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | TTTGAAGTGAAATGTCACAAGGTTTGCCTCTCTTTCAAAACTAACCCCTGGCTGCTGATGCTGGTGCACTaGCCGTCCGAAATGTATTTG | + |
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Preference number: 4 (lower is better) Translates to: FEVKCHKVCLSFKTNPWLLMLVH*PSEMYL Trigger: CAAATACATTTCGGACGGCCAGTGCACCAGCATCAG...CAGCCAGGGGTTAGTTTTGAAAGAGAGGCAAACCTTGTGACATTTCACTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CCA 90 bp | ATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCAATGGCAGGCTCGATTTCAAAGTTGTGGCTaGACTCGTTGTGCTGACGGG | + |
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Preference number: 4 (lower is better) Translates to: IKAESIYFQVRKEQWQARFQSCG*TRCADG Trigger: CCCGTCAGCACAACGAGTCCAGCCACAACTTTGAAA...TCGAGCCTGCCATTGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS TCA 90 bp | GCAGGGGCAAGCACTCGCCCGCGCACACCAGCTCCTTCAGAGGGCTaGTGCTGGTGCACTGGCCGTCCGAAATGTATTTGGTGGACCGCA | + |
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Preference number: 5 (lower is better) Translates to: AGASTRPRTPAPSEG*CWCTGRPKCIWWTA Trigger: TGCGGTCCACCAAATACATTTCGGACGGCCAGTGCACCAGCATCAGCCCTCTGAAGGAGCTGGTGTGCGCGGGCGAGTGCTTGCCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 90 bp | TCGCCCGCGCACACCAGCTCCTTCAGAGGGCTGATGCTGGTGCACTaGCCGTCCGAAATGTATTTGGTGGACCGCAGTTCCCTGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SPAHTSSFRGLMLVH*PSEMYLVDRSSLQP Trigger: GGGCTGCAGGGAACTGCGGTCCACCAAATACATTTCGGACGGCCAGTGCACCAGCATCAGCCCTCTGAAGGAGCTGGTGTGCGCGGGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 90 bp | TCCTCCGGCTCCAGTACTTTGTTCCATAGCCTCCTCCGATCCAGTTaGGAAGCACCGGCAGGGGCAAGCACTCGCCCGCGCACACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SSGSSTLFHSLLRSS*EAPAGASTRPRTPA Trigger: AGCTGGTGTGCGCGGGCGAGTGCTTGCCCCTGCCGGTGCTTCCCAACTGGATCGGAGGAGGCTATGGAACAAAGTACTGGAGCCGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 90 bp | GGTGCTGGGCGGGCTTGGCGGGCGACACGCTTTCAAAGTTGTGGCTaGACTCGTTGTGCTGACGGGTGTACCTCTTGCACTTGCACGCCG | + |
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Preference number: 5 (lower is better) Translates to: GAGRAWRATRFQSCG*TRCADGCTSCTCTP Trigger: CGGCGTGCAAGTGCAAGAGGTACACCCGTCAGCACAACGAGTCCAGCCACAACTTTGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS TCA 90 bp | CGTCCTGACACTGCAGCTGGATCCTCTGGGTGCGCGTCTTGTCGTTaGCACACCGCCACTCCTGAGAGCTCCTCCGGCTCCAGTACTTTG | + |
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Preference number: 5 (lower is better) Translates to: RPDTAAGSSGCASCR*HTATPESSSGSSTL Trigger: CAAAGTACTGGAGCCGGAGGAGCTCTCAGGAGTGGCGGTGTGTCAACGACAAGACGCGCACCCAGAGGATCCAGCTGCAGTGTCAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 90 bp | CTGTGCTTGCTGGATTTGCTGGCTCTCTTCCGCTCTCTGTGGTGCTaGGCGGGCTTGGCGGGCGACACGCTTTCAAAGTTGTGGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LCLLDLLALFRSLWC*AGLAGDTLSKLWLD Trigger: GTCCAGCCACAACTTTGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACCACAGAGAGCGGAAGAGAGCCAGCAAATCCAGCAAGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS GCA 90 bp | AGACTGTGCTTGCTGGATTTGCTGGCTCTCTTCCGCTCTCTGTGGTaGTGGGCGGGCTTGGCGGGCGACACGCTTTCAAAGTTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RLCLLDLLALFRSLW*WAGLAGDTLSKLWL Trigger: CAGCCACAACTTTGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACCACAGAGAGCGGAAGAGAGCCAGCAAATCCAGCAAGCACAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 90 bp | CTCAGACTGTGCTTGCTGGATTTGCTGGCTCTCTTCCGCTCTCTGTaGTGCTGGGCGGGCTTGGCGGGCGACACGCTTTCAAAGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LRLCLLDLLALFRSL*CWAGLAGDTLSKLW Trigger: CCACAACTTTGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACCACAGAGAGCGGAAGAGAGCCAGCAAATCCAGCAAGCACAGTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CAA 90 bp | AGCAATGGCAGGCTCGAGAGAGAGTCTTCCAAGCAATCAAATCTGGGTAGCAGATGGTGCTGGGCGGGCTaGGCGGGCGACACGCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SNGRLERESSKQSNLGSRWCWAG*AGDTLS Trigger: TGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACCA...TCTGCTACCCAGATTTGATTGCTTGGAAGACTCTCTCTCGAGCCTGCCATTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS GCA 90 bp | TGGTGCACTGGCCGTCCGAAATGTATTTGGTGGACCGCAGTTCCCTaGAGCCCACTTGAACTCGACTGTTTCGATCCAGTCCAGTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: WCTGRPKCIWWTAVP*SPLELDCFDPVQCY Trigger: GTAGCACTGGACTGGATCGAAACAGTCGAGTTCAAGTGGGCTGCAGGGAACTGCGGTCCACCAAATACATTTCGGACGGCCAGTGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS TCA 90 bp | TGCAGCCCACTTGAACTCGACTGTTTCGATCCAGTCCAGTGCTACTaGAATGCCTGCCTCCATTCCTGGCTTGATTCAGGGTGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: CSPLELDCFDPVQCY*NACLHSWLDSGCCC Trigger: GCAACAGCACCCTGAATCAAGCCAGGAATGGAGGCAGGCATTTCAGTAGCACTGGACTGGATCGAAACAGTCGAGTTCAAGTGGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CAA 90 bp | CAAGTGAGGAAAGAGCAATGGCAGGCTCGAGAGAGAGTCTTCCAAGCAATCAAACTGTGCTTGCTGGATTaGCTGGCTCTCTTCCGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QVRKEQWQARERVFQAIKLCLLD*LALFRS Trigger: AGAGCGGAAGAGAGCCAGCAAATCCAGCAAGCACAG...TTTGATTGCTTGGAAGACTCTCTCTCGAGCCTGCCATTGCTCTTTCCTCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CAA 90 bp | TTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGACAGCCTGTCCGGCTCCAGTACTTaGTTCCATAGCCTCCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: LHLETLAKEKLVPEKDSLSGSST*FHSLLR Trigger: TCGGAGGAGGCTATGGAACAAAGTACTGGAGCCGGA...CAGGCTGTCCTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CAA 90 bp | AACTACTCATTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGCTCTGGGTGCGCGTCTaGTCGTTGACACACCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: NYSLHLETLAKEKLVPEKLWVRV*SLTHRH Trigger: GTGGCGGTGTGTCAACGACAAGACGCGCACCCAGAG...CTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAATGAGTAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGGCTTGATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCAGCCTCCATTCCTGGCTaGATTCAGGGTGCTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: PAGLDQSRKHILSSEERAASIPG*IQGAVA Trigger: AGCAACAGCACCCTGAATCAAGCCAGGAATGGAGGC...TGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGATCAAGCCCAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CAA 90 bp | AACTACTCATTACATCTTGAGACACTTGCAAAGGAAAAGCTAGTCCCAGAGAAGGTGTACCTCTTGCACTaGCACGCCGTGACCACGGTG | + |
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Preference number: 5 (lower is better) Translates to: NYSLHLETLAKEKLVPEKVYLLH*HAVTTV Trigger: CACCGTGGTCACGGCGTGCAAGTGCAAGAGGTACAC...CTTCTCTGGGACTAGCTTTTCCTTTGCAAGTGTCTCAAGATGTAATGAGTAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS-3UTR CAA 90 bp | ATCAAAGCAGAAAGCATATACTTTCAAGTGAGGAAAGAGCAATGGCAGGCTCGAGACACGCTTTCAAAGTaGTGGCTGGACTCGTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: IKAESIYFQVRKEQWQARDTLSK*WLDSLC Trigger: GCACAACGAGTCCAGCCACAACTTTGAAAGCGTGTC...TCGAGCCTGCCATTGCTCTTTCCTCACTTGAAAGTATATGCTTTCTGCTTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS TCA 72 bp | ACTGCAGCTGGATCCTCTGGGTGCGCGTCTTGTCGTTaGCACACCGCCACTCCTGAGAGCTCCTCCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TAAGSSGCASCR*HTATPESSSGS Trigger: GGAGCCGGAGGAGCTCTCAGGAGTGGCGGTGTGTCAACGACAAGACGCGCACCCAGAGGATCCAGCTGCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 72 bp | TGCTTGCTGGATTTGCTGGCTCTCTTCCGCTCTCTGTaGTGCTGGGCGGGCTTGGCGGGCGACACGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: CLLDLLALFRSL*CWAGLAGDTLS Trigger: TGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACCACAGAGAGCGGAAGAGAGCCAGCAAATCCAGCAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS GCA 72 bp | TTGCTGGATTTGCTGGCTCTCTTCCGCTCTCTGTGGTaGTGGGCGGGCTTGGCGGGCGACACGCTTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLDLLALFRSLW*WAGLAGDTLSK Trigger: CTTTGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACCACAGAGAGCGGAAGAGAGCCAGCAAATCCAGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 72 bp | CTGGATTTGCTGGCTCTCTTCCGCTCTCTGTGGTGCTaGGCGGGCTTGGCGGGCGACACGCTTTCAAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LDLLALFRSLWC*AGLAGDTLSKL Trigger: CAACTTTGAAAGCGTGTCGCCCGCCAAGCCCGCCCAGCACCACAGAGAGCGGAAGAGAGCCAGCAAATCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 72 bp | CGGGCTTGGCGGGCGACACGCTTTCAAAGTTGTGGCTaGACTCGTTGTGCTGACGGGTGTACCTCTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: RAWRATRFQSCG*TRCADGCTSCT Trigger: AGTGCAAGAGGTACACCCGTCAGCACAACGAGTCCAGCCACAACTTTGAAAGCGTGTCGCCCGCCAAGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CCA 72 bp | CACACCAGCTCCTTCAGAGGGCTGATGCTGGTGCACTaGCCGTCCGAAATGTATTTGGTGGACCGCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HTSSFRGLMLVH*PSEMYLVDRSS Trigger: GGAACTGCGGTCCACCAAATACATTTCGGACGGCCAGTGCACCAGCATCAGCCCTCTGAAGGAGCTGGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CAA 72 bp | TCCAGTGCTACTGAAATGCCTGCCTCCATTCCTGGCTaGATTCAGGGTGCTGTTGCTGCTGGGGTGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSATEMPASIPG*IQGAVAAGVCR Trigger: CCGGCACACCCCAGCAGCAACAGCACCCTGAATCAAGCCAGGAATGGAGGCAGGCATTTCAGTAGCACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CAA 72 bp | ACCGCCACTCCTGAGAGCTCCTCCGGCTCCAGTACTTaGTTCCATAGCCTCCTCCGATCCAGTTGGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: TATPESSSGSST*FHSLLRSSWEA Trigger: TGCTTCCCAACTGGATCGGAGGAGGCTATGGAACAAAGTACTGGAGCCGGAGGAGCTCTCAGGAGTGGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS CAA 90 bp | TCGATCCAGTCCAGTGCTACTGAAATGCCTGCCTCCATTCCTGGCTaGATTCAGGGTGCTGTTGCTGCTGGGGTGTGCCGGGACAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SIQSSATEMPASIPG*IQGAVAAGVCRDRF Trigger: AAACCTGTCCCGGCACACCCCAGCAGCAACAGCACCCTGAATCAAGCCAGGAATGGAGGCAGGCATTTCAGTAGCACTGGACTGGATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS GCA 72 bp | GGCCGTCCGAAATGTATTTGGTGGACCGCAGTTCCCTaGAGCCCACTTGAACTCGACTGTTTCGATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GRPKCIWWTAVP*SPLELDCFDPV Trigger: GACTGGATCGAAACAGTCGAGTTCAAGTGGGCTGCAGGGAACTGCGGTCCACCAAATACATTTCGGACGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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| CDS TCA 72 bp | CTTGAACTCGACTGTTTCGATCCAGTCCAGTGCTACTaGAATGCCTGCCTCCATTCCTGGCTTGATTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LELDCFDPVQCY*NACLHSWLDSG Trigger: CCCTGAATCAAGCCAGGAATGGAGGCAGGCATTTCAGTAGCACTGGACTGGATCGAAACAGTCGAGTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041407.7 |
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