Pregenerated sensors for SOS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024241Ensembl transcript IDs: ENSMUST00000068714.7
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGTaGCTGCCTCTGAAACGTCATCCTGTGTATACCCAAAGATCAACC | + |
Preference number: 1 (lower is better) Translates to: RPQLGAPPKLIVLEM*LPLKRHPVYTQRST Trigger: GGTTGATCTTTGGGTATACACAGGATGACGTTTCAGAGGCAGTCACATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CCA 90 bp | GGAATACACAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATaGGAAGAGCATGCAAAACCACCCAGCAGCAGACAACCAGGAATA | + |
Preference number: 1 (lower is better) Translates to: GIHRTCTCTRGIQQR*EEHAKPPSSRQPGI Trigger: TATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTGTGTATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 90 bp | AAGGCACATTTGGCAGCTACTGAAGGCGGCATGCATCTGCACAGGTaGACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCT | + |
Preference number: 1 (lower is better) Translates to: KAHLAATEGGMHLHR*TLSHTHTTCIFCVS Trigger: AGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGCAGATGCATGCCGCCTTCAGTAGCTGCCAAATGTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR TCA 90 bp | ATACTACATCGTGAAGTAGAGTCGTTAGTGTTTGGAGTTCTCATTTaGACTCCCCAGTGCTGGCATGTTCAGTGCATCCATTGCCAGCAA | + |
Preference number: 1 (lower is better) Translates to: ILHREVESLVFGVLI*TPQCWHVQCIHCQQ Trigger: TTGCTGGCAATGGATGCACTGAACATGCCAGCACTGGGGAGTTCAAATGAGAACTCCAAACACTAACGACTCTACTTCACGATGTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR TCA 90 bp | GGGTTACTGAAAGGCTGCGTCATTACTGAGGACACATGCACATACTaGTGGCTGTCAAAGAATGGAATACTACACAGTTCACAGACACAG | + |
Preference number: 1 (lower is better) Translates to: GLLKGCVITEDTCTY*WLSKNGILHSSQTQ Trigger: CTGTGTCTGTGAACTGTGTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGACGCAGCCTTTCAGTAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 90 bp | ACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTaGAATCAGTTTCCACATTCTAAGCTGGAATACCATTTTATTCCA | + |
Preference number: 1 (lower is better) Translates to: TPAQWPEKSLHVISR*NQFPHSKLEYHFIP Trigger: TGGAATAAAATGGTATTCCAGCTTAGAATGTGGAAACTGATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 90 bp | TCCATCCCTTTAATGATAAAGATCACTTCACAATATGAGGACTCCTaGCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAA | + |
Preference number: 1 (lower is better) Translates to: SIPLMIKITSQYEDS*PMARKVPSRDFQVQ Trigger: TTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATTGTGAAGTGATCTTTATCATTAAAGGGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 90 bp | ACAGACACAGTGGAGAATAAGAAAACGTTTTCTCTTCAAGTTGCATaGATTTCAGTCACAGTATTTGTTAGACTCAGAAGAGCAGTACAA | + |
Preference number: 1 (lower is better) Translates to: TDTVENKKTFSLQVA*ISVTVFVRLRRAVQ Trigger: TTGTACTGCTCTTCTGAGTCTAACAAATACTGTGACTGAAATGCATGCAACTTGAAGAGAAAACGTTTTCTTATTCTCCACTGTGTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CAA 90 bp | CCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTaGAAGGCAGCACTTGCCACAGATACTGAATGGGTTTCTAATGTT | + |
Preference number: 2 (lower is better) Translates to: PSLVGSGRLKGAITL*KAALATDTEWVSNV Trigger: AACATTAGAAACCCATTCAGTATCTGTGGCAAGTGCTGCCTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CAA 90 bp | TCTCCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTaGTTGAAGGCAGCACTTGCCACAGATACTGAATGGGTTTCTAAT | + |
Preference number: 2 (lower is better) Translates to: SPSLVGSGRLKGAIT*LKAALATDTEWVSN Trigger: ATTAGAAACCCATTCAGTATCTGTGGCAAGTGCTGCCTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR TCA 90 bp | TCTCCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTTGAAGAAAAGTCCCTTCACGTaGTTTCCAGGTGCAATCAGT | + |
Preference number: 2 (lower is better) Translates to: SPSLVGSGRLKGAITLLKKSPFT*FPGAIS Trigger: ACTGATTGCACCTGGAAATCACGTGAAGGGACTTTT...CTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR TCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGATGGTTGCCTTGGTTTaGAAAGGCAGAGAGGATAGG | + |
Preference number: 2 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMMVALV*KGREDR Trigger: CCTATCCTCTCTGCCTTTTCAAACCAAGGCAACCAT...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGTGCTGGCATGTTCAGTaGATCCATTGCCAGCAATGG | + |
Preference number: 2 (lower is better) Translates to: KKCPISGSIAKQVLLHWLCWHVQ*IHCQQW Trigger: CCATTGCTGGCAATGGATGCACTGAACATGCCAGCA...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | CCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATCAGTTTCCACAATCCATTGCCAGCAATaGATCTGGGGGCTAGGAAAC | + |
Preference number: 2 (lower is better) Translates to: PMARKVPSRDFQVQSVSTIHCQQ*IWGLGN Trigger: GTTTCCTAGCCCCCAGATCCATTGCTGGCAATGGAT...TGTGGAAACTGATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | ACAAATTCTCTGGTGATTTCACCAGATATTTGTACCCCCAAGTCCCTTGCCCTACTCGTTCACATTGGGTaGCTGTGTTTCTGTGTACGG | + |
Preference number: 2 (lower is better) Translates to: TNSLVISPDICTPKSLALLVHIG*LCFCVR Trigger: CCGTACACAGAAACACAGGCACCCAATGTGAACGAG...TAGGGCAAGGGACTTGGGGGTACAAATATCTGGTGAAATCACCAGAGAATTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | TCTCCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTTGAAGCATTTGTTCAATGAATaGCCTAATGCACACTTTGCA | + |
Preference number: 2 (lower is better) Translates to: SPSLVGSGRLKGAITLLKHLFNE*PNAHFA Trigger: TGCAAAGTGTGCATTAGGCCATTCATTGAACAAATG...CTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGTGGTCTAAAAAGTCCTaGGAGATTTGGGCATGTGCA | + |
Preference number: 2 (lower is better) Translates to: KKCPISGSIAKQVLLHWLWSKKS*EIWACA Trigger: TGCACATGCCCAAATCTCCCAGGACTTTTTAGACCA...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR TCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAATTCACTTCAGATCTaGGCTCTCCTTCCCTTGTTG | + |
Preference number: 2 (lower is better) Translates to: CKTTQQQTTRNKWLPWFENSLQI*ALLPLL Trigger: CAACAAGGGAAGGAGAGCTCAGATCTGAAGTGAATT...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACGTTCAGTGCATCCATTaGCAGCAATGGATCTGGGGG | + |
Preference number: 2 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYVQCIH*QQWIWG Trigger: CCCCCAGATCCATTGCTGGCAATGGATGCACTGAAC...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCACGTGATTTCCAGGTaGAATCAGTTTCCACATTCT | + |
Preference number: 2 (lower is better) Translates to: KKCPISGSIAKQVLLHWLHVISR*NQFPHS Trigger: AGAATGTGGAAACTGATTGCACCTGGAAATCACGTG...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACTGCCAGCAATGGATCTaGGGGCTAGGAAACTATCCC | + |
Preference number: 2 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYCQQWI*GLGNYP Trigger: GGGATAGTTTCCTAGCCCCCAGATCCATTGCTGGCA...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGAGAGTCGTTAGTGTTTaGAGTTCTCATTTGAACTCC | + |
Preference number: 2 (lower is better) Translates to: NMRTPAQWPEKSLHVISRRVVSV*SSHLNS Trigger: GGAGTTCAAATGAGAACTCCAAACACTAACGACTCT...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGGGCATACAGCAGAGATaGGAAGAGCATGCAAAACCA | + |
Preference number: 2 (lower is better) Translates to: AQVHSKPHTYNLHLLCILGIQQR*EEHAKP Trigger: TGGTTTTGCATGCTCTTCCCATCTCTGCTGTATGCC...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR TCA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACGATCACTTCACAATATaGGGACTCCTGCCCAATGGC | + |
Preference number: 2 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYDHFTI*GLLPNG Trigger: GCCATTGGGCAGGAGTCCTCATATTGTGAAGTGATC...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR TCA 90 bp | ACAAATTCTCTGGTGATTTCACCAGATATTTGTACCCCCAAGTCCCTTGCCCTAACTATTAGTAAAACATaGAAGGTGTCAGGGAGGCCC | + |
Preference number: 2 (lower is better) Translates to: TNSLVISPDICTPKSLALTISKT*KVSGRP Trigger: GGGCCTCCCTGACACCTTTCATGTTTTACTAATAGT...TAGGGCAAGGGACTTGGGGGTACAAATATCTGGTGAAATCACCAGAGAATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGTTTTGCTGCACTGGCTaGCTTGTAATTTCGAATTCA | + |
Preference number: 2 (lower is better) Translates to: QQQTTRNKWLPWFEKAERFCCTG*LVISNS Trigger: TGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAA...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGAGTTTGTGAGTGGGGGTaGGTAGGGGATGTTCTTAAA | + |
Preference number: 2 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRVCEWG*VGDVLK Trigger: TTTAAGAACATCCCCTACCCACCCCCACTCACAAAC...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR TCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCTTTGGAGTTCTCATTTaGACTCCCCAGTGCTGGCAT | + |
Preference number: 2 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPFGVLI*TPQCWH Trigger: ATGCCAGCACTGGGGAGTTCAAATGAGAACTCCAAA...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR TCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAATCTTATACTACATCGTaGAGTAGAGTCGTTAGTGTT | + |
Preference number: 2 (lower is better) Translates to: CKTTQQQTTRNKWLPWFESYTTS*SRVVSV Trigger: AACACTAACGACTCTACTTCACGATGTAGTATAAGA...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAGTTTTCTCTTCAAGTTaGATGCATTTCAGTCACAGT | + |
Preference number: 2 (lower is better) Translates to: CKTTQQQTTRNKWLPWFEVFSSS*MHFSHS Trigger: ACTGTGACTGAAATGCATGCAACTTGAAGAGAAAAC...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | ACAAATTCTCTGGTGATTTCACCAGATATTTGTACCCCCAAGTCCCTTGCCCTAGACAATGGCTCCCTGTaGGAGAAATATAATTCACTT | + |
Preference number: 2 (lower is better) Translates to: TNSLVISPDICTPKSLALDNGSL*EKYNSL Trigger: AAGTGAATTATATTTCTCCCACAGGGAGCCATTGTC...TAGGGCAAGGGACTTGGGGGTACAAATATCTGGTGAAATCACCAGAGAATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGAACTGCACTACCAAGGTaGACATTTAACTCGCTAATA | + |
Preference number: 2 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRTALPR*TFNSLI Trigger: TATTAGCGAGTTAAATGTGCACCTTGGTAGTGCAGT...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR GCA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGTCTCTTCAAGTTGCATaGATTTCAGTCACAGTATTT | + |
Preference number: 2 (lower is better) Translates to: AQVHSKPHTYNLHLLCILSLQVA*ISVTVF Trigger: AAATACTGTGACTGAAATGCATGCAACTTGAAGAGA...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCACATTAGCTGACACTTaGATTTCTGGAAGAAATGCC | + |
Preference number: 2 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPTLADT*ISGRNA Trigger: GGCATTTCTTCCAGAAATCCAAGTGTCAGCTAATGT...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | AAGATTAACACGGAATACACAGAACCTGCACCTGTACAAGAGGCATACAGCAGACTGGTTGTGTTTATTTaGTATTCTTGGTTCAACTCA | + |
Preference number: 2 (lower is better) Translates to: KINTEYTEPAPVQEAYSRLVVFI*YSWFNS Trigger: TGAGTTGAACCAAGAATACCAAATAAACACAACCAG...TCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTGTGTATTCCGTGTTAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGAAGTTCACAGACACAGTaGAGAATAAGAAAACGTTTT | + |
Preference number: 2 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRSSQTQ*RIRKRF Trigger: AAAACGTTTTCTTATTCTCCACTGTGTCTGTGAACT...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATAAAACTGTCAACATATaGGCTTGTTGGACATTAGAC | + |
Preference number: 2 (lower is better) Translates to: ANLLCNFSATGYLMHYVYKTVNI*ACWTLD Trigger: GTCTAATGTCCAACAAGCCCATATGTTGACAGTTTT...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CCA 72 bp | CAGTGCTGGCATGTTCAGTGCATCCATTGCCAGCAATaGATCTGGGGGCTAGGAAACTATCCCAGCTTAGAG | + |
Preference number: 3 (lower is better) Translates to: QCWHVQCIHCQQ*IWGLGNYPSLE Trigger: CTCTAAGCTGGGATAGTTTCCTAGCCCCCAGATCCATTGCTGGCAATGGATGCACTGAACATGCCAGCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATTGTTCAGTGCATCCATaGCCAGCAATGGATCTGGGG | + |
Preference number: 3 (lower is better) Translates to: RTPAQWPEKSLHVISRCNCSVHP*PAMDLG Trigger: CCCCAGATCCATTGCTGGCAATGGATGCACTGAACA...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGGGGGCCATCACCTTGTaGAAGGCAGCACTTGCCACA | + |
Preference number: 3 (lower is better) Translates to: AQVHSKPHTYNLHLLCILGAITL*KAALAT Trigger: TGTGGCAAGTGCTGCCTTCAACAAGGTGATGGCCCC...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 72 bp | TTGGCAGCTACTGAAGGCGGCATGCATCTGCACAGGTaGACTCTAAGCCACACACATACAACTTGCATCTTT | + |
Preference number: 3 (lower is better) Translates to: LAATEGGMHLHR*TLSHTHTTCIF Trigger: AAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGCAGATGCATGCCGCCTTCAGTAGCTGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAAAAAGTCCTGGGAGATTaGGGCATGTGCATTACAGTC | + |
Preference number: 3 (lower is better) Translates to: QNLHLYKRHTAEMGRACKKVLGD*GMCITV Trigger: GACTGTAATGCACATGCCCAAATCTCCCAGGACTTT...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR TCA 72 bp | CTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGTaGCTGCCTCTGAAACGTCATCCTGTGTATACCCAA | + |
Preference number: 3 (lower is better) Translates to: LGAPPKLIVLEM*LPLKRHPVYTQ Trigger: TTGGGTATACACAGGATGACGTTTCAGAGGCAGTCACATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CCA 72 bp | ATAATTCACTTCAGATCTGAGCTCTCCTTCCCTTGTTaGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTT | + |
Preference number: 3 (lower is better) Translates to: IIHFRSELSFPC*LRQTERGHHLV Trigger: AACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGAGCTCAGATCTGAAGTGAATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | AAGATTAACACGGAATACACAGAACCTGCACCTGTACAAGAGGCATACAGCAGACAACACCACCACATTTaGTTTGTGAGTGGGGGTGGG | + |
Preference number: 3 (lower is better) Translates to: KINTEYTEPAPVQEAYSRQHHHI*FVSGGG Trigger: CCCACCCCCACTCACAAACAAAATGTGGTGGTGTTG...TCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTGTGTATTCCGTGTTAATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAGGCCTAATGCACACTTaGCATCCAAGAAGGGATTTG | + |
Preference number: 3 (lower is better) Translates to: CKTTQQQTTRNKWLPWFEGLMHT*HPRRDL Trigger: CAAATCCCTTCTTGGATGCAAAGTGTGCATTAGGCC...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR TCA 72 bp | CGTGAAGTAGAGTCGTTAGTGTTTGGAGTTCTCATTTaGACTCCCCAGTGCTGGCATGTTCAGTGCATCCAT | + |
Preference number: 3 (lower is better) Translates to: REVESLVFGVLI*TPQCWHVQCIH Trigger: ATGGATGCACTGAACATGCCAGCACTGGGGAGTTCAAATGAGAACTCCAAACACTAACGACTCTACTTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CCA 72 bp | GGACAGTTAGGCTGGTCTAAAAAGTCCTGGGAGATTTaGGCATGTGCATTACAGTCATACGGAGCAGCATTA | + |
Preference number: 3 (lower is better) Translates to: GQLGWSKKSWEI*ACALQSYGAAL Trigger: TAATGCTGCTCCGTATGACTGTAATGCACATGCCCAAATCTCCCAGGACTTTTTAGACCAGCCTAACTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CCA 72 bp | ACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTaGTTTGAAAAGGCAGAGAGGATAGGAAGGGTTTTC | + |
Preference number: 3 (lower is better) Translates to: TQQQTTRNKWLP*FEKAERIGRVF Trigger: GAAAACCCTTCCTATCCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGAGTTTGGAGTTCTCATTaGAACTCCCCAGTGCTGGCA | + |
Preference number: 3 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRVWSSH*NSPVLA Trigger: TGCCAGCACTGGGGAGTTCAAATGAGAACTCCAAAC...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
||
3UTR-3UTR CAA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGACAAAAAGTACCTCTTaGGTGAAGCCTCGGTACCCA | + |
Preference number: 3 (lower is better) Translates to: AQVHSKPHTYNLHLLCILTKSTS*VKPRYP Trigger: TGGGTACCGAGGCTTCACCAAAGAGGTACTTTTTGT...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAAAGCATTTCTATTATATaGGTAATGAGCCACCAAGAG | + |
Preference number: 3 (lower is better) Translates to: QNLHLYKRHTAEMGRACKSISII*VMSHQE Trigger: CTCTTGGTGGCTCATTACCAATATAATAGAAATGCT...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR TCA 72 bp | CGCCTAAGCTCATTGTTTTGGAAATGTGACTGCCTCTaGAACGTCATCCTGTGTATACCCAAAGATCAACCT | + |
Preference number: 3 (lower is better) Translates to: RLSSLFWKCDCL*NVILCIPKDQP Trigger: AGGTTGATCTTTGGGTATACACAGGATGACGTTTCAGAGGCAGTCACATTTCCAAAACAATGAGCTTAGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGTTTGAAATCGTAGCATaGCCTTCAGCCTTAGTAGTC | + |
Preference number: 3 (lower is better) Translates to: AQVHSKPHTYNLHLLCILFEIVA*PSALVV Trigger: GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAA...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR TCA 72 bp | TTAAGCCAGTATTTCCCTTCACGCCAAACTCCAACTTaGGATTATTCCGTAAGAACTAGATACCCAGGTACC | + |
Preference number: 3 (lower is better) Translates to: LSQYFPSRQTPT*DYSVRTRYPGT Trigger: GGTACCTGGGTATCTAGTTCTTACGGAATAATCTCAAGTTGGAGTTTGGCGTGAAGGGAAATACTGGCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR TCA 72 bp | ATATTGGTAATGAGCCACCAAGAGGAACTCCCTTTGTaGGCCAAGCATAAGAAAACATTAGCTGACACTTGG | + |
Preference number: 3 (lower is better) Translates to: ILVMSHQEELPL*AKHKKTLADTW Trigger: CCAAGTGTCAGCTAATGTTTTCTTATGCTTGGCTCACAAAGGGAGTTCCTCTTGGTGGCTCATTACCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 72 bp | TTAATGATAAAGATCACTTCACAATATGAGGACTCCTaGCCAATGGCCAGAAAAGTCCCTTCACGTGATTTC | + |
Preference number: 3 (lower is better) Translates to: LMIKITSQYEDS*PMARKVPSRDF Trigger: GAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATTGTGAAGTGATCTTTATCATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACTTTCAGTCACAGTATTaGTTAGACTCAGAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYFQSQY*LDSEEQ Trigger: CTGCTCTTCTGAGTCTAACAAATACTGTGACTGAAA...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCGTTTATTTGGTATTCTaGGTTCAACTCAGATCCACT | + |
Preference number: 3 (lower is better) Translates to: VCIKEEFEIVALPSALVVVYLVF*VQLRST Trigger: AGTGGATCTGAGTTGAACCAAGAATACCAAATAAAC...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 72 bp | GAACTAGATACCCAGGTACCACCACATGTGCTTTTATaGTTAGTGTTTGTATGTTTTCAACCCAAAGAAATA | + |
Preference number: 3 (lower is better) Translates to: ELDTQVPPHVLL*LVFVCFQPKEI Trigger: TATTTCTTTGGGTTGAAAACATACAAACACTAAGCATAAAAGCACATGTGGTGGTACCTGGGTATCTAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR-3UTR CAA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATAGACTGTTCTGCTGGTaGTGTTTATTTGGTATTCTT | + |
Preference number: 3 (lower is better) Translates to: ANLLCNFSATGYLMHYVYRLFCW*CLFGIL Trigger: AAGAATACCAAATAAACACAACCAGCAGAACAGTCT...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR GCA 72 bp | TCTGTTCTTAGAAGACTATATACTGCACTACCAAGGTaGACATTTAACTCGCTAATAAATACAAAGTTGCCA | + |
Preference number: 3 (lower is better) Translates to: SVLRRLYTALPR*TFNSLINTKLP Trigger: TGGCAACTTTGTATTTATTAGCGAGTTAAATGTGCACCTTGGTAGTGCAGTATATAGTCTTCTAAGAACAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | TCTCCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTTGAAGGCGCGTTCTCCTCGCTaGAAAACTCGTAAGGCAGCT | + |
Preference number: 4 (lower is better) Translates to: SPSLVGSGRLKGAITLLKARSPR*KTRKAA Trigger: AGCTGCCTTACGAGTTTTTCAGCGAGGAGAACGCGC...CTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGACGTTCCTCCACATCTaGAGCACTCCGGGGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: QQQTTRNKWLPWFEKAERTFLHI*STPGLS Trigger: GCTCAGCCCCGGAGTGCTTCAGATGTGGAGGAACGT...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | TCTCCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTTGAAGCCAGGTCTGCTTATGTaGCACTCAACTGTGGGAGGT | + |
Preference number: 4 (lower is better) Translates to: SPSLVGSGRLKGAITLLKPGLLM*HSTVGG Trigger: ACCTCCCACAGTTGAGTGGCACATAAGCAGACCTGG...CTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGCCGAGGGGAGTTTGGTaGAGATGCTGTGCTTTCCGT | + |
Preference number: 4 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMPRGVW*RCCAFR Trigger: ACGGAAAGCACAGCATCTGCACCAAACTCCCCTCGG...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATGCAGATGCCTTCTCGTaGCATGAGGAGAGGGGGTTT | + |
Preference number: 4 (lower is better) Translates to: RTPAQWPEKSLHVISRCNADAFS*HEERGF Trigger: AAACCCCCTCTCCTCATGGCACGAGAAGGCATCTGC...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGCCTGCTGCAGAGGTGTaGGATGTCTCATGGTTCCTG | + |
Preference number: 4 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMPAAEV*DVSWFL Trigger: CAGGAACCATGAGACATCCCACACCTCTGCAGCAGG...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGGGTCCGAGGGGAGTTTaGTGCAGATGCTGTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMGPRGV*CRCCAF Trigger: GAAAGCACAGCATCTGCACCAAACTCCCCTCGGACC...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CAA 72 bp | CTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTaGTTGAAGGCAGCACTTGCCACAGATACTGAATGG | + |
Preference number: 4 (lower is better) Translates to: LVGSGRLKGAIT*LKAALATDTEW Trigger: CCATTCAGTATCTGTGGCAAGTGCTGCCTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCGCTGGAGGTGCCAGATaGAGGGGGCGGCGTCAGTGG | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPAGGAR*RGRRQW Trigger: CCACTGACGCCGCCCCCTGCATCTGGCACCTCCAGC...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAGCTGGGGCAGACTCTaGACGTCTTCGAGGGGGTAC | + |
Preference number: 4 (lower is better) Translates to: CKTTQQQTTRNKWLPWFESWGRL*TSSRGY Trigger: GTACCCCCTCGAAGACGTCCAGAGTCTGCCCCAGCT...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGCCTAGGAGGAATAGCTaGGGGGCTGTCCAAGTGCTT | + |
Preference number: 4 (lower is better) Translates to: NMRTPAQWPEKSLHVISRPRRNS*GAVQVL Trigger: AAGCACTTGGACAGCCCCCCAGCTATTCCTCCTAGG...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAAAGGGGATGGGCTGTTTaGGAAGAAGGCGTTGCCATG | + |
Preference number: 4 (lower is better) Translates to: QNLHLYKRHTAEMGRACKRGWAV*EEGVAM Trigger: CATGGCAACGCCTTCTTCCCAAACAGCCCATCCCCT...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGAGAAGTGCTTTGTCGTaGAGGAACAGGAGGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: NMRTPAQWPEKSLHVISRRSALS*RNRRPS Trigger: GCTGGGCCTCCTGTTCCTCCACGACAAAGCACTTCT...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATACTGGACAGCTTCTTTaGAGCCTTCGCCTATGGACT | + |
Preference number: 4 (lower is better) Translates to: RTPAQWPEKSLHVISRCNTGQLL*SLRLWT Trigger: AGTCCATAGGCGAAGGCTTCAAAGAAGCTGTCCAGT...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | TCTCCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTTGAAGTCTCGTTCATCTTCTTaGTGGCTAGCTGTTTCCCCT | + |
Preference number: 4 (lower is better) Translates to: SPSLVGSGRLKGAITLLKSRSSS*WLAVSP Trigger: AGGGGAAACAGCTAGCCATCAAGAAGATGAACGAGA...CTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGTCCTGGTCTTGGATTTaGTGGACGAACACCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMSWSWI*WTNTRR Trigger: TCTCCTGGTGTTCGTCCATCAAATCCAAGACCAGGA...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAAGGAAGAGGCTTAGGGTaGCGGGGTTCTATTTCTAGG | + |
Preference number: 4 (lower is better) Translates to: QNLHLYKRHTAEMGRACKGRGLG*RGSISR Trigger: CCTAGAAATAGAACCCCGGCACCCTAAGCCTCTTCC...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | TCTCCTTCCCTTGTTGGCTCAGGCAGACTGAAAGGGGCCATCACCTTGTTGAAGTTGGTGCAGATGCTGTaGTTTCCGTCTCACTTTCAG | + |
Preference number: 4 (lower is better) Translates to: SPSLVGSGRLKGAITLLKLVQML*FPSHFQ Trigger: CTGAAAGTGAGACGGAAAGCACAGCATCTGCACCAA...CTTCAACAAGGTGATGGCCCCTTTCAGTCTGCCTGAGCCAACAAGGGAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAAGGTGGTCCATCTCTATaGATGGATGGGTGTGTGTGC | + |
Preference number: 4 (lower is better) Translates to: QNLHLYKRHTAEMGRACKGGPSL*MDGCVC Trigger: GCACACACACCCATCCATGCATAGAGATGGACCACC...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATCTTCCTACTAATGGGTaGGGACTGCCTTCATCTGTC | + |
Preference number: 4 (lower is better) Translates to: RTPAQWPEKSLHVISRCNLPTNG*GLPSSV Trigger: GACAGATGAAGGCAGTCCCCACCCATTAGTAGGAAG...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGGAAGCACTCCGGGGCTaGGCTTGGCATAGCATATTT | + |
Preference number: 4 (lower is better) Translates to: KKCPISGSIAKQVLLHWLEALRG*AWHSIF Trigger: AAATATGCTATGCCAAGCTCAGCCCCGGAGTGCTTC...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAACTCGGAGTCAGGTTCTaGAAACCTGTACACTTCAGC | + |
Preference number: 4 (lower is better) Translates to: QNLHLYKRHTAEMGRACKLGVRF*KPVHFS Trigger: GCTGAAGTGTACAGGTTTGCAGAACCTGACTCCGAG...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGTTTCTTGGCTCCTGCTaGAGAGGTGTGGGATGTCTC | + |
Preference number: 4 (lower is better) Translates to: KKCPISGSIAKQVLLHWLFLGSC*RGVGCL Trigger: GAGACATCCCACACCTCTGCAGCAGGAGCCAAGAAA...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCCTGTGTTGCTGGAGGTaGCAGATGCAGGGGGCGGCG | + |
Preference number: 4 (lower is better) Translates to: VCIKEEFEIVALPSALVVLCCWR*QMQGAA Trigger: CGCCGCCCCCTGCATCTGGCACCTCCAGCAACACAG...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGGCTTTGGATGTGGGTTaGCTAGGAGGAATAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: QQQTTRNKWLPWFEKAERALDVG*LGGIAG Trigger: CCCAGCTATTCCTCCTAGGCAACCCACATCCAAAGC...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGGAAGCAGATCTTGAATaGAAAGGGCTTGCCGAGTGG | + |
Preference number: 4 (lower is better) Translates to: KKCPISGSIAKQVLLHWLEADLE*KGLAEW Trigger: CCACTCGGCAAGCCCTTTTCATTCAAGATCTGCTTC...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATAAGAAGGCGTTGCCATaGTCACTCTTTTTGCCCAAA | + |
Preference number: 4 (lower is better) Translates to: RTPAQWPEKSLHVISRCNKKALP*SLFLPK Trigger: TTTGGGCAAAAAGAGTGATCATGGCAACGCCTTCTT...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGATCCTCCTTCTCCTCCTaGAGCACCGTTACGTCCAGC | + |
Preference number: 4 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRSSFSS*STVTSS Trigger: GCTGGACGTAACGGTGCTGCAGGAGGAGAAGGAGGA...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCTATGTGCCCAGGTCTaGTTATGTGCCACTCAACTG | + |
Preference number: 4 (lower is better) Translates to: KKCPISGSIAKQVLLHWLLCAQV*LCATQL Trigger: CAGTTGAGTGGCACATAAGCAGACCTGGGCACATAG...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGCATGATCACTCTTTTTaGCCAAAGGAGGAGGTTGGA | + |
Preference number: 4 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMHDHSF*PKEEVG Trigger: TCCAACCTCCTCCTTTGGGCAAAAAGAGTGATCATG...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | AAGATTAACACGGAATACACAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGGCCCAGCAATGGAATaGAGGTCCATCTCCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: KINTEYTEPAPVQEAYSRGPAME*RSISCV Trigger: GACACAGGAGATGGACCTCCATTCCATTGCTGGGCC...TCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTGTGTATTCCGTGTTAATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGCAGGAGGCCCAGCAATaGAATGGAGGTCCATCTCCT | + |
Preference number: 4 (lower is better) Translates to: AQVHSKPHTYNLHLLCILQEAQQ*NGGPSP Trigger: AGGAGATGGACCTCCATTCCATTGCTGGGCCTCCTG...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGACTGTGTCAGTGGTGGTaGTGGCAGATGCCTTCTCGT | + |
Preference number: 4 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRLCQWW*WQMPSR Trigger: ACGAGAAGGCATCTGCCATCACCACCACTGACACAG...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATGTAGTTCTTGAGGTCTaGAAAAGGACCTGTATGTTG | + |
Preference number: 4 (lower is better) Translates to: RTPAQWPEKSLHVISRCNVVLEV*KRTCML Trigger: CAACATACAGGTCCTTTTGCAGACCTCAAGAACTAC...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AAGATTAACACGGAATACACAGAACCTGCACCTGTACAAGAGGCATACAGCAGAAAACCTCTTCAGCTCTaGACTCAGGGGCTGATCTCC | + |
Preference number: 4 (lower is better) Translates to: KINTEYTEPAPVQEAYSRKPLQL*TQGLIS Trigger: GGAGATCAGCCCCTGAGTGCAGAGCTGAAGAGGTTT...TCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTGTGTATTCCGTGTTAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGCTATTGGGTGTAAGGTaGGCAAGTCAAAAGTCTCTA | + |
Preference number: 4 (lower is better) Translates to: NMRTPAQWPEKSLHVISRLLGVR*ASQKSL Trigger: TAGAGACTTTTGACTTGCTCACCTTACACCCAATAG...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGCTGATTCAAGTAAAGTaGGTTGCCGAGCAATTTCTA | + |
Preference number: 4 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMLIQVK*VAEQFL Trigger: TAGAAATTGCTCGGCAACTCACTTTACTTGAATCAG...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGAAGCAGGGCTGTTATTaGTTGCTTCATACACTCCTT | + |
Preference number: 4 (lower is better) Translates to: NMRTPAQWPEKSLHVISRKQGCY*LLHTLL Trigger: AAGGAGTGTATGAAGCAAGCAATAACAGCCCTGCTT...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | ACAAATTCTCTGGTGATTTCACCAGATATTTGTACCCCCAAGTCCCTTGCCCTACCAGGGAGTCTTGGCTaGCCATGGTTTGATTTACAG | + |
Preference number: 4 (lower is better) Translates to: TNSLVISPDICTPKSLALPGSLG*PWFDLQ Trigger: CTGTAAATCAAACCATGGGCAGCCAAGACTCCCTGG...TAGGGCAAGGGACTTGGGGGTACAAATATCTGGTGAAATCACCAGAGAATTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AAGAAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGACTAATTCTGATGGCTaGACAGCCCGGTATAGATCT | + |
Preference number: 4 (lower is better) Translates to: KKCPISGSIAKQVLLHWLTNSDG*TARYRS Trigger: AGATCTATACCGGGCTGTGCAGCCATCAGAATTAGT...CAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATCCATCAATGTTCTTCTaGATCTCGTTCATCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: RTPAQWPEKSLHVISRCNPSMFF*ISFIFL Trigger: CAAGAAGATGAACGAGATCCAGAAGAACATTGATGG...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGATCTCTATGCATGGATaGGTGTGTGTGCTCCCTTTT | + |
Preference number: 4 (lower is better) Translates to: QQQTTRNKWLPWFEKAERISMHG*VCVLPF Trigger: AAAAGGGAGCACACACACCCATCCATGCATAGAGAT...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGCCTCTTTTCAATGGCTaGTTGGGCATCAGCTATTGC | + |
Preference number: 4 (lower is better) Translates to: AQVHSKPHTYNLHLLCILPLFNG*LGISYC Trigger: GCAATAGCTGATGCCCAATCAGCCATTGAAAAGAGG...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAATAAGTTTGTTCTCCTaGGGTGGAAGGCTCTTCATC | + |
Preference number: 4 (lower is better) Translates to: CKTTQQQTTRNKWLPWFEISLFS*GGRLFI Trigger: GATGAAGAGCCTTCCACCTCAGGAGAACAAACTTAT...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGGTCGAATTTCTGCCATaGATGCTTTTACCAAATCAT | + |
Preference number: 4 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMVEFLP*MLLPNH Trigger: ATGATTTGGTAAAAGCATTCATGGCAGAAATTCGAC...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAACCAGGCTTTGATAACTaGCTAAGAAAATGGCCATGG | + |
Preference number: 4 (lower is better) Translates to: CKTTQQQTTRNKWLPWFEPGFDN*LRKWPW Trigger: CCATGGCCATTTTCTTAGTCAGTTATCAAAGCCTGG...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGAGACTCAGTAGTTCTTaGGGTCTGCAAAAGGACCTG | + |
Preference number: 4 (lower is better) Translates to: AQVHSKPHTYNLHLLCILRLSSS*GLQKDL Trigger: CAGGTCCTTTTGCAGACCTCAAGAACTACTGAGTCT...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGCTCAACTGCACAGGCTaGATATATTCCTTTCTAAAC | + |
Preference number: 4 (lower is better) Translates to: NMRTPAQWPEKSLHVISRLNCTG*IYSFLN Trigger: GTTTAGAAAGGAATATATTCAGCCTGTGCAGTTGAG...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGCAAAGAGATCAGTGCTaGCATCCAGTTGTTTTTCTC | + |
Preference number: 4 (lower is better) Translates to: QQQTTRNKWLPWFEKAERQRDQC*HPVVFL Trigger: GAGAAAAACAACTGGATGGCAGCACTGATCTCTTTG...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAATCAAAAGTCTCTATGTaGCCAGGTCTGCTTATGTGC | + |
Preference number: 4 (lower is better) Translates to: CKTTQQQTTRNKWLPWFESKVSM*PGLLMC Trigger: GCACATAAGCAGACCTGGGCACATAGAGACTTTTGA...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAATTGGGAAGAAGGCGTTaGCATGATCACTCTTTTTGC | + |
Preference number: 4 (lower is better) Translates to: CKTTQQQTTRNKWLPWFELGRRR*HDHSFC Trigger: GCAAAAAGAGTGATCATGGCAACGCCTTCTTCCCAA...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACTGTACACTTCAGCACTaGGCAGCCTCATCTGCTCCT | + |
Preference number: 4 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYCTLQH*AASSAP Trigger: AGGAGCAGATGAGGCTGCCCAGTGCTGAAGTGTACA...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCTGGGGATCCCAGCTTTaGGCTGCACATTCTCTTCGA | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPWGSQL*AAHSLR Trigger: TCGAAGAGAATGTGCAGCCCAAAGCTGGGATCCCCA...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCAAACATCTGTGTTGCTaGAGGTGCCAGATGCAGGGG | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPKHLCC*RCQMQG Trigger: CCCCTGCATCTGGCACCTCCAGCAACACAGATGTTT...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CAA 72 bp | TTGACAAACAAATTCTCTGGTGATTTCACCAGATATTaGTACCCCCAAGTCCCTTGCCCTAATCACGTCCCC | + |
Preference number: 4 (lower is better) Translates to: LTNKFSGDFTRY*YPQVPCPNHVP Trigger: GGGGACGTGATTAGGGCAAGGGACTTGGGGGTACAAATATCTGGTGAAATCACCAGAGAATTTGTTTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACTCTGCACTCAGGGGCTaGTCTCCATTCTCTATAGCT | + |
Preference number: 4 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYSALRG*SPFSIA Trigger: AGCTATAGAGAATGGAGATCAGCCCCTGAGTGCAGA...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCTCCTCTCCAGGGTGCTaGGGTACTGCAAAGAGATCA | + |
Preference number: 4 (lower is better) Translates to: VCIKEEFEIVALPSALVVSSPGC*GTAKRS Trigger: TGATCTCTTTGCAGTACCGCAGCACCCTGGAGAGGA...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCGGAGTTTGGTGCAGATaGTGTGCTTTCCGTCTCACT | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPGVWCR*CAFRLT Trigger: AGTGAGACGGAAAGCACAGCATCTGCACCAAACTCC...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAATCTTCCTCTTTTCAATaGCTGATTGGGCATCAGCTA | + |
Preference number: 4 (lower is better) Translates to: CKTTQQQTTRNKWLPWFESSSFQ*LIGHQL Trigger: TAGCTGATGCCCAATCAGCCATTGAAAAGAGGAAGA...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGTTGGCTCAGGCTCTaGAATTTCAAATCTTTCTAT | + |
Preference number: 4 (lower is better) Translates to: NMRTPAQWPEKSLHVISRCWLRL*NFKSFY Trigger: ATAGAAAGATTTGAAATTCCAGAGCCTGAGCCAACA...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCTGTGCCACTCAACTGTaGGAGGTGAGCTCTGAAATG | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPCATQL*EVSSEM Trigger: CATTTCAGAGCTCACCTCCCACAGTTGAGTGGCACA...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GCACAGGTGCACTCTAAGCCACACACATACAACTTGCATCTTTTGTGTATCTTGGTAGCTAATTTTTCTTaGCTCCTGCTGCAGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: AQVHSKPHTYNLHLLCILVANFS*LLLQRC Trigger: ACACCTCTGCAGCAGGAGCCAAGAAAAATTAGCTAC...CAAGATACACAAAAGATGCAAGTTGTATGTGTGTGGCTTAGAGTGCACCTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCGGCATTCTCCAGCAGTaGTGGTCCATCTCTATGCAT | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPGILQQ*WSISMH Trigger: ATGCATAGAGATGGACCACCACTGCTGGAGAATGCC...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CAA 72 bp | AAATGCCCCATATCTGGGAGCATAGCTAAGCAAGTTTaGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGA | + |
Preference number: 4 (lower is better) Translates to: KCPISGSIAKQV*LHWLPCNFEFR Trigger: TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCTCCCAGATATGGGGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGAAGTTTGGGGATAAGTTaGGAAGTGCTTTGTCGTGGA | + |
Preference number: 4 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRSLGIS*EVLCRG Trigger: TCCACGACAAAGCACTTCTCAACTTATCCCCAAACT...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGTGCCCACTTATCAATTaGATGAGGAAAACTCTTTTG | + |
Preference number: 4 (lower is better) Translates to: QQQTTRNKWLPWFEKAERCPLIN*MRKTLL Trigger: CAAAAGAGTTTTCCTCATCCAATTGATAAGTGGGCA...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | ACAAATTCTCTGGTGATTTCACCAGATATTTGTACCCCCAAGTCCCTTGCCCTAAGTCTTGGCTGCCCATaGTTTGATTTACAGCAAATC | + |
Preference number: 4 (lower is better) Translates to: TNSLVISPDICTPKSLALSLGCP*FDLQQI Trigger: GATTTGCTGTAAATCAAACCATGGGCAGCCAAGACT...TAGGGCAAGGGACTTGGGGGTACAAATATCTGGTGAAATCACCAGAGAATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | ACAAATTCTCTGGTGATTTCACCAGATATTTGTACCCCCAAGTCCCTTGCCCTACGTCCGAACAAAATTTaGATCTGCGTACATGTGGTA | + |
Preference number: 4 (lower is better) Translates to: TNSLVISPDICTPKSLALRPNKI*ICVHVV Trigger: TACCACATGTACGCAGATCCAAATTTTGTTCGGACG...TAGGGCAAGGGACTTGGGGGTACAAATATCTGGTGAAATCACCAGAGAATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACATTCTCCAGCAGTGGTaGTCCATCTCTATGCATGGA | + |
Preference number: 4 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYILQQW*SISMHG Trigger: TCCATGCATAGAGATGGACCACCACTGCTGGAGAAT...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCCTCAACTGTGGGAGGTaGGCTCTGAAATGTAATGTT | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPLNCGR*ALKCNV Trigger: AACATTACATTTCAGAGCTCACCTCCCACAGTTGAG...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | AAGATTAACACGGAATACACAGAACCTGCACCTGTACAAGAGGCATACAGCAGATGTCTGCTTGGTATTTaGTCAAATGTGTGGTCTAGT | + |
Preference number: 4 (lower is better) Translates to: KINTEYTEPAPVQEAYSRCLLGI*SNVWSS Trigger: ACTAGACCACACATTTGAGCAAATACCAAGCAGACA...TCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTGTGTATTCCGTGTTAATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATTCAGGACCTCAGGGTTaGCCTCTTCTGTCTTCAGGA | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYSGPQG*PLLSSG Trigger: TCCTGAAGACAGAAGAGGGCAACCCTGAGGTCCTGA...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGATTTGTTCTCCTGAGGTaGAAGGCTCTTCATCAGTTA | + |
Preference number: 4 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRFVLLR*KALHQL Trigger: TAACTGATGAAGAGCCTTCCACCTCAGGAGAACAAA...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCCCCAAAGGAGGAGGTTaGAGATGTAATGGTGAGCTT | + |
Preference number: 4 (lower is better) Translates to: VCIKEEFEIVALPSALVVPKGGG*RCNGEL Trigger: AAGCTCACCATTACATCTCCAACCTCCTCCTTTGGG...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCCTTCCAGGACACCATTaGAGTTGTTCAGCTCTTGAA | + |
Preference number: 4 (lower is better) Translates to: VCIKEEFEIVALPSALVVLPGHH*SCSALE Trigger: TTCAAGAGCTGAACAACTTCAATGGTGTCCTGGAAG...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACAGGGCTGTTATTGCTTaGTTCATACACTCCTTGTCT | + |
Preference number: 4 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYRAVIA*FIHSLS Trigger: AGACAAGGAGTGTATGAAGCAAGCAATAACAGCCCT...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCTTGGGCATCAGCTATTaGCCACTTATCAATTGGATG | + |
Preference number: 4 (lower is better) Translates to: VCIKEEFEIVALPSALVVLGISY*PLINWM Trigger: CATCCAATTGATAAGTGGGCAATAGCTGATGCCCAA...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATATTTTTCTTGGCTCCTaGTGCAGAGGTGTGGGATGT | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYIFLGS*CRGVGC Trigger: ACATCCCACACCTCTGCAGCAGGAGCCAAGAAAAAT...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATCAGAATCGAACACGCTaGAAACATCTGTGTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYQNRTR*KHLCCW Trigger: CCAGCAACACAGATGTTTGCAGCGTGTTCGATTCTG...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCAAGTTGTTCAGCTCTTaGAAGACTTGTAGAATCTCA | + |
Preference number: 4 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPKLFSS*KTCRIS Trigger: TGAGATTCTACAAGTCTTTCAAGAGCTGAACAACTT...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATCTAATGGGTGGGGACTaGCTTCATCTGTCATTTCTA | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYLMGGD*LHLSFL Trigger: TAGAAATGACAGATGAAGGCAGTCCCCACCCATTAG...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCTCAAGTAAAGTGAGTTaGCGAGCAATTTCTATTGGG | + |
Preference number: 4 (lower is better) Translates to: VCIKEEFEIVALPSALVVSSKVS*RAISIG Trigger: CCCAATAGAAATTGCTCGGCAACTCACTTTACTTGA...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | TCAAAGAGCTTAGCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCATTTTCAATGGCTGATTaGGCATCAGCTATTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: SKSLAVKKHFYYIGNEPPFSMAD*ASAIAH Trigger: GTGGGCAATAGCTGATGCCCAATCAGCCATTGAAAA...TGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGCTAAGCTCTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR TCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATGAGTTCCTTCCATTATaGACTCATTGCAACACTGTC | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYEFLPL*THCNTV Trigger: GACAGTGTTGCAATGAGTTCATAATGGAAGGAACTC...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATCTGCAAAGAGATCAGTaGTGCCATCCAGTTGTTTTT | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYLQRDQ*CHPVVF Trigger: AAAAACAACTGGATGGCAGCACTGATCTCTTTGCAG...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATTTTTCCATGCCACTTTaGACATTAAGCAGGGCTGTT | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYFSMPL*TLSRAV Trigger: AACAGCCCTGCTTAATGTCCAAAGTGGCATGGAAAA...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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3UTR CAA 72 bp | AGTCCTTTAGTAGACTGTTCTGCTGGTTGTGTTTATTaGGTATTCTTGGTTCAACTCAGATCCACTAAAACA | + |
Preference number: 4 (lower is better) Translates to: SPLVDCSAGCVY*VFLVQLRSTKT Trigger: TGTTTTAGTGGATCTGAGTTGAACCAAGAATACCAAATAAACACAACCAGCAGAACAGTCTACTAAAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR GCA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATATGATTTCAAAAGCATaGTTGTACTCACTGGTGTCA | + |
Preference number: 4 (lower is better) Translates to: ANLLCNFSATGYLMHYVYMISKA*LYSLVS Trigger: TGACACCAGTGAGTACAAGCATGCTTTTGAAATCAT...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 90 bp | GGCTTGCCGAGTGGTCAGAATCGAACACGCTGCAAACATCTGTGTTaGTGGAGGTGCCAGATGCAGGGGGCGGCGTCAGTGGGGTCCGAG | + |
Preference number: 5 (lower is better) Translates to: GLPSGQNRTRCKHLC*WRCQMQGAASVGSE Trigger: CTCGGACCCCACTGACGCCGCCCCCTGCATCTGGCACCTCCAGCAACACAGATGTTTGCAGCGTGTTCGATTCTGACCACTCGGCAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 90 bp | TTGCCGAGTGGTCAGAATCGAACACGCTGCAAACATCTGTGTTGCTaGAGGTGCCAGATGCAGGGGGCGGCGTCAGTGGGGTCCGAGGGG | + |
Preference number: 5 (lower is better) Translates to: LPSGQNRTRCKHLCC*RCQMQGAASVGSEG Trigger: CCCCTCGGACCCCACTGACGCCGCCCCCTGCATCTGGCACCTCCAGCAACACAGATGTTTGCAGCGTGTTCGATTCTGACCACTCGGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | CATGTCAAACGACCCCAGCTGGGTGCACCGCCTAAGCTCATTGTTTTGGAAATGAGCAGCCCCCGCCACTaGGGCGCGTTCTCCTCGCTG | + |
Preference number: 5 (lower is better) Translates to: HVKRPQLGAPPKLIVLEMSSPRH*GAFSSL Trigger: CAGCGAGGAGAACGCGCCCAAGTGGCGGGGGCTGCT...CATTTCCAAAACAATGAGCTTAGGCGGTGCACCCAGCTGGGGTCGTTTGACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 90 bp | AGGCCCAGCAATGGAATGGAGGTCCATCTCCTGTGTCAGTGGTGGTaGTGGCAGATGCCTTCTCGTGCCATGAGGAGAGGGGGTTTGGGG | + |
Preference number: 5 (lower is better) Translates to: RPSNGMEVHLLCQWW*WQMPSRAMRRGGLG Trigger: CCCCAAACCCCCTCTCCTCATGGCACGAGAAGGCATCTGCCATCACCACCACTGACACAGGAGATGGACCTCCATTCCATTGCTGGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 90 bp | ATCTTGAATGAAAAGGGCTTGCCGAGTGGTCAGAATCGAACACGCTaGAAACATCTGTGTTGCTGGAGGTGCCAGATGCAGGGGGCGGCG | + |
Preference number: 5 (lower is better) Translates to: ILNEKGLPSGQNRTR*KHLCCWRCQMQGAA Trigger: CGCCGCCCCCTGCATCTGGCACCTCCAGCAACACAGATGTTTGCAGCGTGTTCGATTCTGACCACTCGGCAAGCCCTTTTCATTCAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 90 bp | TATTCTCCTCGGAGTCAGGTTCTGCAAACCTGTACACTTCAGCACTaGGCAGCCTCATCTGCTCCTCCTTCTCCTCCTGCAGCACCGTTA | + |
Preference number: 5 (lower is better) Translates to: YSPRSQVLQTCTLQH*AASSAPPSPPAAPL Trigger: TAACGGTGCTGCAGGAGGAGAAGGAGGAGCAGATGAGGCTGCCCAGTGCTGAAGTGTACAGGTTTGCAGAACCTGACTCCGAGGAGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | AATATGAGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGGGGTCCGAGGGGAGTTaGGTGCAGATGCTGTGCTTT | + |
Preference number: 5 (lower is better) Translates to: NMRTPAQWPEKSLHVISRGSEGS*VQMLCF Trigger: AAAGCACAGCATCTGCACCAAACTCCCCTCGGACCC...CCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCTCATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 90 bp | AGTTTTTGGAGGGAGTTTGGGGATAAGTTGAGAAGTGCTTTGTCGTaGAGGAACAGGAGGCCCAGCAATGGAATGGAGGTCCATCTCCTG | + |
Preference number: 5 (lower is better) Translates to: SFWREFGDKLRSALS*RNRRPSNGMEVHLL Trigger: CAGGAGATGGACCTCCATTCCATTGCTGGGCCTCCTGTTCCTCCACGACAAAGCACTTCTCAACTTATCCCCAAACTCCCTCCAAAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAACTGCAAACATCTGTGTaGCTGGAGGTGCCAGATGCA | + |
Preference number: 5 (lower is better) Translates to: QNLHLYKRHTAEMGRACKLQTSV*LEVPDA Trigger: TGCATCTGGCACCTCCAGCAACACAGATGTTTGCAG...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGGGCTTTGGATGTGGGTaGCCTAGGAGGAATAGCTGG | + |
Preference number: 5 (lower is better) Translates to: QQQTTRNKWLPWFEKAERGFGCG*PRRNSW Trigger: CCAGCTATTCCTCCTAGGCAACCCACATCCAAAGCC...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | AGGACTCCTGCCCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATAAGTTGAGAAGTGCTTaGTCGTGGAGGAACAGGAGG | + |
Preference number: 5 (lower is better) Translates to: RTPAQWPEKSLHVISRCNKLRSA*SWRNRR Trigger: CCTCCTGTTCCTCCACGACAAAGCACTTCTCAACTT...ATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGGGCAGGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 90 bp | TCCACCCAGTGCCGACACACATTTAACACCCTCAACTGCACAGGCTaGATATATTCCTTTCTAAACCTCTTCAGCTCTGCACTCAGGGGC | + |
Preference number: 5 (lower is better) Translates to: STQCRHTFNTLNCTG*IYSFLNLFSSALRG Trigger: GCCCCTGAGTGCAGAGCTGAAGAGGTTTAGAAAGGAATATATTCAGCCTGTGCAGTTGAGGGTGTTAAATGTGTGTCGGCACTGGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 90 bp | CTCTATGTGCCCAGGTCTGCTTATGTGCCACTCAACTGTGGGAGGTaGGCTCTGAAATGTAATGTTATGACCTGGGCCATTGTCTCTTGC | + |
Preference number: 5 (lower is better) Translates to: LYVPRSAYVPLNCGR*ALKCNVMTWAIVSC Trigger: GCAAGAGACAATGGCCCAGGTCATAACATTACATTTCAGAGCTCACCTCCCACAGTTGAGTGGCACATAAGCAGACCTGGGCACATAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 90 bp | GTACATGTGGTAGGTAAGCCTCTCAATGAGCTTAAGCACTGTCCCTaGCTTGATAATGGGGATCCCAGCTTTGGGCTGCACATTCTCTTC | + |
Preference number: 5 (lower is better) Translates to: VHVVGKPLNELKHCP*LDNGDPSFGLHILF Trigger: GAAGAGAATGTGCAGCCCAAAGCTGGGATCCCCATTATCAAGGCAGGGACAGTGCTTAAGCTCATTGAGAGGCTTACCTACCACATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 90 bp | GCTTTCCGTCTCACTTTCAGGAATCCGACTGTAGCTAATTTTTCTTaGCTCCTGCTGCAGAGGTGTGGGATGTCTCATGGTTCCTGGTCT | + |
Preference number: 5 (lower is better) Translates to: AFRLTFRNPTVANFS*LLLQRCGMSHGSWS Trigger: AGACCAGGAACCATGAGACATCCCACACCTCTGCAGCAGGAGCCAAGAAAAATTAGCTACAGTCGGATTCCTGAAAGTGAGACGGAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAATGGGGATCCCAGCTTaGGGCTGCACATTCTCTTCG | + |
Preference number: 5 (lower is better) Translates to: CKTTQQQTTRNKWLPWFEMGIPA*GCTFSS Trigger: CGAAGAGAATGTGCAGCCCAAAGCTGGGATCCCCAT...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 90 bp | GGGATGGGCTGTTTGGGAAGAAGGCGTTGCCATGATCACTCTTTTTaGCCAAAGGAGGAGGTTGGAGATGTAATGGTGAGCTTGAGAAAA | + |
Preference number: 5 (lower is better) Translates to: GMGCLGRRRCHDHSF*PKEEVGDVMVSLRK Trigger: TTTTCTCAAGCTCACCATTACATCTCCAACCTCCTCCTTTGGGCAAAAAGAGTGATCATGGCAACGCCTTCTTCCCAAACAGCCCATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | CAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAAAGGCAGAGAGGTACTGGACAGCTTCTTaGAAGCCTTCGCCTATGGAC | + |
Preference number: 5 (lower is better) Translates to: QQQTTRNKWLPWFEKAERYWTAS*KPSPMD Trigger: GTCCATAGGCGAAGGCTTCAAAGAAGCTGTCCAGTA...CCTCTCTGCCTTTTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | CAGAACCTGCACCTGTACAAGAGGCATACAGCAGAGATGGGAAGAGCATGCAAAATCTCGTTCATCTTCTaGATGGCTAGCTGTTTCCCC | + |
Preference number: 5 (lower is better) Translates to: QNLHLYKRHTAEMGRACKISFIF*MASCFP Trigger: GGGGAAACAGCTAGCCATCAAGAAGATGAACGAGAT...TTTGCATGCTCTTCCCATCTCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | CCAATGGCCAGAAAAGTCCCTTCACGTGATTTCCAGGTGCAATCAGTTTCCACATCATGGTTCCTGGTCTaGGATTTGATGGACGAACAC | + |
Preference number: 5 (lower is better) Translates to: PMARKVPSRDFQVQSVSTSWFLV*DLMDEH Trigger: GTGTTCGTCCATCAAATCCAAGACCAGGAACCATGA...TGTGGAAACTGATTGCACCTGGAAATCACGTGAAGGGACTTTTCTGGCCATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAAATGTGTCTCTCGTGTTaGGCTCCTACACGTGTAAGA | + |
Preference number: 5 (lower is better) Translates to: CKTTQQQTTRNKWLPWFEMCLSC*APTRVR Trigger: TCTTACACGTGTAGGAGCCAAACACGAGAGACACAT...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 90 bp | GTGCCCTTGGATAAACTTATAGATGAGACTGAAGCAGATCTTGAATaGAAAGGGCTTGCCGAGTGGTCAGAATCGAACACGCTGCAAACA | + |
Preference number: 5 (lower is better) Translates to: VPLDKLIDETEADLE*KGLAEWSESNTLQT Trigger: TGTTTGCAGCGTGTTCGATTCTGACCACTCGGCAAGCCCTTTTCATTCAAGATCTGCTTCAGTCTCATCTATAAGTTTATCCAAGGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 90 bp | GATGGCTGCACAGCCCGGTATAGATCTGATTCAAGTAAAGTGAGTTaGCGAGCAATTTCTATTGGGTGTAAGGTGAGCAAGTCAAAAGTC | + |
Preference number: 5 (lower is better) Translates to: DGCTARYRSDSSKVS*RAISIGCKVSKSKV Trigger: GACTTTTGACTTGCTCACCTTACACCCAATAGAAATTGCTCGGCAACTCACTTTACTTGAATCAGATCTATACCGGGCTGTGCAGCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | AAGATTAACACGGAATACACAGAACCTGCACCTGTACAAGAGGCATACAGCAGACAGGGCTGTTATTGCTaGCTTCATACACTCCTTGTC | + |
Preference number: 5 (lower is better) Translates to: KINTEYTEPAPVQEAYSRQGCYC*LHTLLV Trigger: GACAAGGAGTGTATGAAGCAAGCAATAACAGCCCTG...TCTGCTGTATGCCTCTTGTACAGGTGCAGGTTCTGTGTATTCCGTGTTAATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACTTCCTGGTCTTGGATTaGATGGACGAACACCAGGAG | + |
Preference number: 5 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYFLVLD*MDEHQE Trigger: CTCCTGGTGTTCGTCCATCAAATCCAAGACCAGGAA...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGAGAGTTTGGGGATAAGTaGAGAAGTGCTTTGTCGTGG | + |
Preference number: 5 (lower is better) Translates to: SIAKQVLLHWLPCNFEFREFGDK*RSALSW Trigger: CCACGACAAAGCACTTCTCAACTTATCCCCAAACTC...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | TGCAAAACCACCCAGCAGCAGACAACCAGGAATAAATGGTTGCCTTGGTTTGAATTGGCTGCCCATGGTTaGATTTACAGCAAATCATTA | + |
Preference number: 5 (lower is better) Translates to: CKTTQQQTTRNKWLPWFELAAHG*IYSKSL Trigger: TAATGATTTGCTGTAAATCAAACCATGGGCAGCCAA...TTCAAACCAAGGCAACCATTTATTCCTGGTTGTCTGCTGCTGGGTGGTTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGATGCTTAGACATAATCTaGGATGGGGAGGATTCAGCT | + |
Preference number: 5 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRCLDII*DGEDSA Trigger: AGCTGAATCCTCCCCATCCAAGATTATGTCTAAGCA...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | AGCATAGCTAAGCAAGTTTTGCTGCACTGGCTGCCTTGTAATTTCGAATTCAGAGATGTAATGGTGAGCTaGAGAAAACATCAGGTGTCC | + |
Preference number: 5 (lower is better) Translates to: SIAKQVLLHWLPCNFEFRDVMVS*RKHQVS Trigger: GGACACCTGATGTTTTCTCAAGCTCACCATTACATC...TCTGAATTCGAAATTACAAGGCAGCCAGTGCAGCAAAACTTGCTTAGCTATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 90 bp | GGCTCTGGAATTTCAAATCTTTCTATCAGAAGACTCAGTAGTTCTTaGGGTCTGCAAAAGGACCTGTATGTTGTAAGAAACGTCCGAACA | + |
Preference number: 5 (lower is better) Translates to: GSGISNLSIRRLSSS*GLQKDLYVVRNVRT Trigger: TGTTCGGACGTTTCTTACAACATACAGGTCCTTTTGCAGACCTCAAGAACTACTGAGTCTTCTGATAGAAAGATTTGAAATTCCAGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | TCATTACTGAGGACACATGCACATACTGATGGCTGTCAAAGAATGGAATACTACATGAGGAAAACTCTTTaGAACACGTTCCTCCACATC | + |
Preference number: 5 (lower is better) Translates to: SLLRTHAHTDGCQRMEYYMRKTL*NTFLHI Trigger: GATGTGGAGGAACGTGTTCAAAAGAGTTTTCCTCAT...GTAGTATTCCATTCTTTGACAGCCATCAGTATGTGCATGTGTCCTCAGTAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | GTTTGCATTAAGGAAGAATTTGAAATCGTAGCATTGCCTTCAGCCTTAGTAGTCAGGTCCGATCTGATATaGAATAGCGTGGTGAATAGG | + |
Preference number: 5 (lower is better) Translates to: VCIKEEFEIVALPSALVVRSDLI*NSVVNR Trigger: CCTATTCACCACGCTATTCAATATCAGATCGGACCT...GACTACTAAGGCTGAAGGCAATGCTACGATTTCAAATTCTTCCTTAATGCAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 90 bp | ATAGCACTGACAACTTCCAGGACACCATTGAAGTTGTTCAGCTCTTaGAAGACTTGTAGAATCTCAATTATCCGACTTACTACAGCTACT | + |
Preference number: 5 (lower is better) Translates to: IALTTSRTPLKLFSS*KTCRISIIRLTTAT Trigger: AGTAGCTGTAGTAAGTCGGATAATTGAGATTCTACAAGTCTTTCAAGAGCTGAACAACTTCAATGGTGTCCTGGAAGTTGTCAGTGCTAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | GCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCAAGAGGAACTCCCTTGCCCACTTATCAATaGGATGAGGAAAACTCTTTT | + |
Preference number: 5 (lower is better) Translates to: AVKKHFYYIGNEPPRGTPLPTYQ*DEENSF Trigger: AAAAGAGTTTTCCTCATCCAATTGATAAGTGGGCAA...GGGAGTTCCTCTTGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | TCAAAGAGCTTAGCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCATTTTTCCATGCCACTTaGGACATTAAGCAGGGCTGT | + |
Preference number: 5 (lower is better) Translates to: SKSLAVKKHFYYIGNEPPFFHAT*DIKQGC Trigger: ACAGCCCTGCTTAATGTCCAAAGTGGCATGGAAAAA...TGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGCTAAGCTCTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | TCAAAGAGCTTAGCTGTGAAAAAGCATTTCTATTATATTGGTAATGAGCCACCACCATGCTGTTTCCCATaGGATTCAAGTTTTCAAAGA | + |
Preference number: 5 (lower is better) Translates to: SKSLAVKKHFYYIGNEPPPCCFP*DSSFQR Trigger: TCTTTGAAAACTTGAATCCAATGGGAAACAGCATGG...TGGTGGCTCATTACCAATATAATAGAAATGCTTTTTCACAGCTAAGCTCTTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS-3UTR CAA 90 bp | GCTAACTTGCTTTGTAACTTTTCAGCAACTGGCTACTTAATGCACTATGTTTATACTTCATCAGTGCCCTaGGATAAACTTATAGATGAG | + |
Preference number: 5 (lower is better) Translates to: ANLLCNFSATGYLMHYVYTSSVP*DKLIDE Trigger: CTCATCTATAAGTTTATCCAAGGGCACTGATGAAGT...ATAAACATAGTGCATTAAGTAGCCAGTTGCTGAAAAGTTACAAAGCAAGTTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 90 bp | GGGCTTGCCGAGTGGTCAGAATCGAACACGCTGCAAACATCTGTGTaGCTGGAGGTGCCAGATGCAGGGGGCGGCGTCAGTGGGGTCCGA | + |
Preference number: 6 (lower is better) Translates to: GLAEWSESNTLQTSV*LEVPDAGGGVSGVR Trigger: TCGGACCCCACTGACGCCGCCCCCTGCATCTGGCACCTCCAGCAACACAGATGTTTGCAGCGTGTTCGATTCTGACCACTCGGCAAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | GGTCAGAATCGAACACGCTGCAAACATCTGTGTTGCTaGAGGTGCCAGATGCAGGGGGCGGCGTCAGTGGGG | + |
Preference number: 6 (lower is better) Translates to: GQNRTRCKHLCC*RCQMQGAASVG Trigger: CCCCACTGACGCCGCCCCCTGCATCTGGCACCTCCAGCAACACAGATGTTTGCAGCGTGTTCGATTCTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | CCTGCAGCACCGTTACGTCCAGCATCCTCTCCAGGGTaGTGCGGTACTGCAAAGAGATCAGTGCTGCCATCC | + |
Preference number: 6 (lower is better) Translates to: PAAPLRPASSPG*CGTAKRSVLPS Trigger: GGATGGCAGCACTGATCTCTTTGCAGTACCGCAGCACCCTGGAGAGGATGCTGGACGTAACGGTGCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | TACACAGGGGCAAGCAGCAGCCGGGGCAGGACGTACTaGACAGCTTCTTTGAAGCCTTCGCCTATGGACTGC | + |
Preference number: 6 (lower is better) Translates to: YTGASSSRGRTY*TASLKPSPMDC Trigger: GCAGTCCATAGGCGAAGGCTTCAAAGAAGCTGTCCAGTACGTCCTGCCCCGGCTGCTGCTTGCCCCTGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | GCAGCACCGTTACGTCCAGCATCCTCTCCAGGGTGCTaGGGTACTGCAAAGAGATCAGTGCTGCCATCCAGT | + |
Preference number: 6 (lower is better) Translates to: AAPLRPASSPGC*GTAKRSVLPSS Trigger: ACTGGATGGCAGCACTGATCTCTTTGCAGTACCGCAGCACCCTGGAGAGGATGCTGGACGTAACGGTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | CGGCGTCAGTGGGGTCCGAGGGGAGTTTGGTGCAGATaGTGTGCTTTCCGTCTCACTTTCAGGAATCCGACT | + |
Preference number: 6 (lower is better) Translates to: RRQWGPRGVWCR*CAFRLTFRNPT Trigger: AGTCGGATTCCTGAAAGTGAGACGGAAAGCACAGCATCTGCACCAAACTCCCCTCGGACCCCACTGACGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | AGTGGTCAGAATCGAACACGCTGCAAACATCTGTGTTaGTGGAGGTGCCAGATGCAGGGGGCGGCGTCAGTG | + |
Preference number: 6 (lower is better) Translates to: SGQNRTRCKHLC*WRCQMQGAASV Trigger: CACTGACGCCGCCCCCTGCATCTGGCACCTCCAGCAACACAGATGTTTGCAGCGTGTTCGATTCTGACCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | CGGAGTCAGGTTCTGCAAACCTGTACACTTCAGCACTaGGCAGCCTCATCTGCTCCTCCTTCTCCTCCTGCA | + |
Preference number: 6 (lower is better) Translates to: RSQVLQTCTLQH*AASSAPPSPPA Trigger: TGCAGGAGGAGAAGGAGGAGCAGATGAGGCTGCCCAGTGCTGAAGTGTACAGGTTTGCAGAACCTGACTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | CTTTGTCGTGGAGGAACAGGAGGCCCAGCAATGGAATaGAGGTCCATCTCCTGTGTCAGTGGTGGTGATGGC | + |
Preference number: 6 (lower is better) Translates to: LCRGGTGGPAME*RSISCVSGGDG Trigger: GCCATCACCACCACTGACACAGGAGATGGACCTCCATTCCATTGCTGGGCCTCCTGTTCCTCCACGACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 72 bp | GCAGCAGCCGGGGCAGGACGTACTGGACAGCTTCTTTaGAGCCTTCGCCTATGGACTGCAAATAAAGTGCTG | + |
Preference number: 6 (lower is better) Translates to: AAAGAGRTGQLL*SLRLWTANKVL Trigger: CAGCACTTTATTTGCAGTCCATAGGCGAAGGCTTCAAAGAAGCTGTCCAGTACGTCCTGCCCCGGCTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 72 bp | AATGGAATGGAGGTCCATCTCCTGTGTCAGTGGTGGTaGTGGCAGATGCCTTCTCGTGCCATGAGGAGAGGG | + |
Preference number: 6 (lower is better) Translates to: NGMEVHLLCQWW*WQMPSRAMRRG Trigger: CCCTCTCCTCATGGCACGAGAAGGCATCTGCCATCACCACCACTGACACAGGAGATGGACCTCCATTCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | TCAGTGGGGTCCGAGGGGAGTTTGGTGCAGATGCTGTaGTTTCCGTCTCACTTTCAGGAATCCGACTGTAGC | + |
Preference number: 6 (lower is better) Translates to: SVGSEGSLVQML*FPSHFQESDCS Trigger: GCTACAGTCGGATTCCTGAAAGTGAGACGGAAAGCACAGCATCTGCACCAAACTCCCCTCGGACCCCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | AAGTGCTTTGTCGTGGAGGAACAGGAGGCCCAGCAATaGAATGGAGGTCCATCTCCTGTGTCAGTGGTGGTG | + |
Preference number: 6 (lower is better) Translates to: KCFVVEEQEAQQ*NGGPSPVSVVV Trigger: CACCACCACTGACACAGGAGATGGACCTCCATTCCATTGCTGGGCCTCCTGTTCCTCCACGACAAAGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 90 bp | TGGTACTGCTGGATCTCGCCTGTGATCTCGGCCACTCTCCTCCTCTaGCTGAAGTTAATAAGCTCTTTCCCGTGTCTCCTCAGGACCTCA | + |
Preference number: 6 (lower is better) Translates to: WYCWISPVISATLLL*LKLISSFPCLLRTS Trigger: TGAGGTCCTGAGGAGACACGGGAAAGAGCTTATTAACTTCAGCAAGAGGAGGAGAGTGGCCGAGATCACAGGCGAGATCCAGCAGTACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | GTAGGTAAGCCTCTCAATGAGCTTAAGCACTGTCCCTaGCTTGATAATGGGGATCCCAGCTTTGGGCTGCAC | + |
Preference number: 6 (lower is better) Translates to: VGKPLNELKHCP*LDNGDPSFGLH Trigger: GTGCAGCCCAAAGCTGGGATCCCCATTATCAAGGCAGGGACAGTGCTTAAGCTCATTGAGAGGCTTACCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | AGGGAGTTTGGGGATAAGTTGAGAAGTGCTTTGTCGTaGAGGAACAGGAGGCCCAGCAATGGAATGGAGGTC | + |
Preference number: 6 (lower is better) Translates to: REFGDKLRSALS*RNRRPSNGMEV Trigger: GACCTCCATTCCATTGCTGGGCCTCCTGTTCCTCCACGACAAAGCACTTCTCAACTTATCCCCAAACTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 72 bp | TGGATCTCGCCTGTGATCTCGGCCACTCTCCTCCTCTaGCTGAAGTTAATAAGCTCTTTCCCGTGTCTCCTC | + |
Preference number: 6 (lower is better) Translates to: WISPVISATLLL*LKLISSFPCLL Trigger: GAGGAGACACGGGAAAGAGCTTATTAACTTCAGCAAGAGGAGGAGAGTGGCCGAGATCACAGGCGAGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 90 bp | TTGGCTCCTGCTGCAGAGGTGTGGGATGTCTCATGGTTCCTGGTCTaGGATTTGATGGACGAACACCAGGAGATTTTAGGGGATAGCTGT | + |
Preference number: 6 (lower is better) Translates to: LAPAAEVWDVSWFLV*DLMDEHQEILGDSC Trigger: ACAGCTATCCCCTAAAATCTCCTGGTGTTCGTCCATCAAATCCAAGACCAGGAACCATGAGACATCCCACACCTCTGCAGCAGGAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 72 bp | AAAGGGGATGGGCTGTTTGGGAAGAAGGCGTTGCCATaGTCACTCTTTTTGCCCAAAGGAGGAGGTTGGAGA | + |
Preference number: 6 (lower is better) Translates to: KGDGLFGKKALP*SLFLPKGGGWR Trigger: TCTCCAACCTCCTCCTTTGGGCAAAAAGAGTGATCATGGCAACGCCTTCTTCCCAAACAGCCCATCCCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 72 bp | TGCCCAAAGGAGGAGGTTGGAGATGTAATGGTGAGCTaGAGAAAACATCAGGTGTCCTCACAGGTTCCCGTG | + |
Preference number: 6 (lower is better) Translates to: CPKEEVGDVMVS*RKHQVSSQVPV Trigger: CACGGGAACCTGTGAGGACACCTGATGTTTTCTCAAGCTCACCATTACATCTCCAACCTCCTCCTTTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 72 bp | CCCAGGTCTGCTTATGTGCCACTCAACTGTGGGAGGTaGGCTCTGAAATGTAATGTTATGACCTGGGCCATT | + |
Preference number: 6 (lower is better) Translates to: PRSAYVPLNCGR*ALKCNVMTWAI Trigger: AATGGCCCAGGTCATAACATTACATTTCAGAGCTCACCTCCCACAGTTGAGTGGCACATAAGCAGACCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | ATAGGCTTTGGATGTGGGTTGCCTAGGAGGAATAGCTaGGGGGCTGTCCAAGTGCTTAGACATAATCTTGGA | + |
Preference number: 6 (lower is better) Translates to: IGFGCGLPRRNS*GAVQVLRHNLG Trigger: TCCAAGATTATGTCTAAGCACTTGGACAGCCCCCCAGCTATTCCTCCTAGGCAACCCACATCCAAAGCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 72 bp | GAGGTGTGGGATGTCTCATGGTTCCTGGTCTTGGATTaGATGGACGAACACCAGGAGATTTTAGGGGATAGC | + |
Preference number: 6 (lower is better) Translates to: EVWDVSWFLVLD*MDEHQEILGDS Trigger: GCTATCCCCTAAAATCTCCTGGTGTTCGTCCATCAAATCCAAGACCAGGAACCATGAGACATCCCACACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 90 bp | CACTCTTTTTGCCCAAAGGAGGAGGTTGGAGATGTAATGGTGAGCTaGAGAAAACATCAGGTGTCCTCACAGGTTCCCGTGGTGGTAACA | + |
Preference number: 6 (lower is better) Translates to: HSFCPKEEVGDVMVS*RKHQVSSQVPVVVT Trigger: TGTTACCACCACGGGAACCTGTGAGGACACCTGATGTTTTCTCAAGCTCACCATTACATCTCCAACCTCCTCCTTTGGGCAAAAAGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | ATTGGGTGTAAGGTGAGCAAGTCAAAAGTCTCTATGTaGCCAGGTCTGCTTATGTGCCACTCAACTGTGGGA | + |
Preference number: 6 (lower is better) Translates to: IGCKVSKSKVSM*PGLLMCHSTVG Trigger: TCCCACAGTTGAGTGGCACATAAGCAGACCTGGGCACATAGAGACTTTTGACTTGCTCACCTTACACCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | TGTTTGGGAAGAAGGCGTTGCCATGATCACTCTTTTTaGCCAAAGGAGGAGGTTGGAGATGTAATGGTGAGC | + |
Preference number: 6 (lower is better) Translates to: CLGRRRCHDHSF*PKEEVGDVMVS Trigger: GCTCACCATTACATCTCCAACCTCCTCCTTTGGGCAAAAAGAGTGATCATGGCAACGCCTTCTTCCCAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | CCAATGTCCTTCCCCTCCCAGCCATCAATGTTCTTCTaGATCTCGTTCATCTTCTTGATGGCTAGCTGTTTC | + |
Preference number: 6 (lower is better) Translates to: PMSFPSQPSMFF*ISFIFLMASCF Trigger: GAAACAGCTAGCCATCAAGAAGATGAACGAGATCCAGAAGAACATTGATGGCTGGGAGGGGAAGGACATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CCA 72 bp | CTCACTTTCAGGAATCCGACTGTAGCTAATTTTTCTTaGCTCCTGCTGCAGAGGTGTGGGATGTCTCATGGT | + |
Preference number: 6 (lower is better) Translates to: LTFRNPTVANFS*LLLQRCGMSHG Trigger: ACCATGAGACATCCCACACCTCTGCAGCAGGAGCCAAGAAAAATTAGCTACAGTCGGATTCCTGAAAGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 72 bp | CAGCCATCAATGTTCTTCTGGATCTCGTTCATCTTCTaGATGGCTAGCTGTTTCCCCTTCATCTGCTGGCTG | + |
Preference number: 6 (lower is better) Translates to: QPSMFFWISFIF*MASCFPFICWL Trigger: CAGCCAGCAGATGAAGGGGAAACAGCTAGCCATCAAGAAGATGAACGAGATCCAGAAGAACATTGATGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 72 bp | AGCACTGTCCCTGCCTTGATAATGGGGATCCCAGCTTaGGGCTGCACATTCTCTTCGAATAGAATATTCTCC | + |
Preference number: 6 (lower is better) Translates to: STVPALIMGIPA*GCTFSSNRIFS Trigger: GGAGAATATTCTATTCGAAGAGAATGTGCAGCCCAAAGCTGGGATCCCCATTATCAAGGCAGGGACAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 90 bp | CCTGCTGCAGAGGTGTGGGATGTCTCATGGTTCCTGGTCTTGGATTaGATGGACGAACACCAGGAGATTTTAGGGGATAGCTGTATTTTT | + |
Preference number: 6 (lower is better) Translates to: PAAEVWDVSWFLVLD*MDEHQEILGDSCIF Trigger: AAAAATACAGCTATCCCCTAAAATCTCCTGGTGTTCGTCCATCAAATCCAAGACCAGGAACCATGAGACATCCCACACCTCTGCAGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS CAA 90 bp | TTTGTAAGTTTTTGGAGGGAGTTTGGGGATAAGTTGAGAAGTGCTTaGTCGTGGAGGAACAGGAGGCCCAGCAATGGAATGGAGGTCCAT | + |
Preference number: 6 (lower is better) Translates to: FVSFWREFGDKLRSA*SWRNRRPSNGMEVH Trigger: ATGGACCTCCATTCCATTGCTGGGCCTCCTGTTCCTCCACGACAAAGCACTTCTCAACTTATCCCCAAACTCCCTCCAAAAACTTACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 72 bp | AGCCATCAATGTTCTTCTGGATCTCGTTCATCTTCTTaGTGGCTAGCTGTTTCCCCTTCATCTGCTGGCTGT | + |
Preference number: 6 (lower is better) Translates to: SHQCSSGSRSSS*WLAVSPSSAGC Trigger: ACAGCCAGCAGATGAAGGGGAAACAGCTAGCCATCAAGAAGATGAACGAGATCCAGAAGAACATTGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS TCA 72 bp | TGCCGACACACATTTAACACCCTCAACTGCACAGGCTaGATATATTCCTTTCTAAACCTCTTCAGCTCTGCA | + |
Preference number: 6 (lower is better) Translates to: CRHTFNTLNCTG*IYSFLNLFSSA Trigger: TGCAGAGCTGAAGAGGTTTAGAAAGGAATATATTCAGCCTGTGCAGTTGAGGGTGTTAAATGTGTGTCGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | ACAGCCCGGTATAGATCTGATTCAAGTAAAGTGAGTTaGCGAGCAATTTCTATTGGGTGTAAGGTGAGCAAG | + |
Preference number: 6 (lower is better) Translates to: TARYRSDSSKVS*RAISIGCKVSK Trigger: CTTGCTCACCTTACACCCAATAGAAATTGCTCGGCAACTCACTTTACTTGAATCAGATCTATACCGGGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | TTCCATGCCACTTTGGACATTAAGCAGGGCTGTTATTaGTTGCTTCATACACTCCTTGTCTTCTTGATCTTC | + |
Preference number: 6 (lower is better) Translates to: FHATLDIKQGCY*LLHTLLVFLIF Trigger: GAAGATCAAGAAGACAAGGAGTGTATGAAGCAAGCAATAACAGCCCTGCTTAATGTCCAAAGTGGCATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |
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CDS GCA 72 bp | ATACATTTCTCAAACCACAAAGTGAGGTTAGTGGTGTaGCGAATCATCTTCAGAAGGTTGGGAGAATTAATT | + |
Preference number: 6 (lower is better) Translates to: IHFSNHKVRLVV*RIIFRRLGELI Trigger: AATTAATTCTCCCAACCTTCTGAAGATGATTCGGCACACCACTAACCTCACTTTGTGGTTTGAGAAATGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068714.7 |