Pregenerated sensors for SORCS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063434Ensembl transcript IDs: ENSMUST00000078880.6
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACATGCATGAGGCAGGGCCTCTTTCGGAAAGGTGTGCGCGCCTTTaGCAGCTACGTCCACTCCCCCTCAACCTACGTCCTGCAATTGAA | + |
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Preference number: 1 (lower is better) Translates to: DMHEAGPLSERCARL*QLRPLPLNLRPAIE Trigger: TTCAATTGCAGGACGTAGGTTGAGGGGGAGTGGACGTAGCTGCCAAAGGCGCGCACACCTTTCCGAAAGAGGCCCTGCCTCATGCATGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR TCA 90 bp | CCAGGTGGTGCTCACTGGACCTCACATAATGCCCAGGGAATGTTCTaGGCTCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATAT | + |
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Preference number: 1 (lower is better) Translates to: PGGAHWTSHNAQGMF*AQNSWAAPHGQCTY Trigger: ATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGAGCTCAGAACATTCCCTGGGCATTATGTGAGGTCCAGTGAGCACCACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CCA 90 bp | GGCAGCTACGTCCACTCCCCCTCAACCTACGTCCTGCAATTGAACTaGGGAATGGTCTGTGTTGTATGTGTATGTAGTGTGGAGCATGGG | + |
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Preference number: 1 (lower is better) Translates to: GSYVHSPSTYVLQLN*GMVCVVCVCSVEHG Trigger: CCCATGCTCCACACTACATACACATACAACACAGACCATTCCCCAGTTCAATTGCAGGACGTAGGTTGAGGGGGAGTGGACGTAGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR TCA 90 bp | CCTTTGGCAGCTACGTCCACTCCCCCTCAACCTACGTCCTGCAATTaGACTGGGGAATGGTCTGTGTTGTATGTGTATGTAGTGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PLAATSTPPQPTSCN*TGEWSVLYVYVVWS Trigger: GCTCCACACTACATACACATACAACACAGACCATTCCCCAGTTCAATTGCAGGACGTAGGTTGAGGGGGAGTGGACGTAGCTGCCAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CCA 90 bp | CTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTaGACAGAGACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: LPHALYIHKQKQAMV*TETQELSVKDSWRA Trigger: TGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGTCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR GCA 90 bp | ATTGTAGTTATATACAATACACCATCTTTAGCCTCAGTTTCGACATaGATGAGGCAGGGCCTCTTTCGGAAAGGTGTGCGCGCCTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: IVVIYNTPSLASVST*MRQGLFRKGVRAFG Trigger: GCCAAAGGCGCGCACACCTTTCCGAAAGAGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATAACTACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR TCA 90 bp | CAGTATTTAGTACACAAATTGCAATTGTCTGCCCCATTTAACCCTTaGAATGAAAAAGAAGGGTCTTTAGAAACCCTTCTGATACTGACC | + |
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Preference number: 1 (lower is better) Translates to: QYLVHKLQLSAPFNP*NEKEGSLETLLILT Trigger: GGTCAGTATCAGAAGGGTTTCTAAAGACCCTTCTTTTTCATTTCAAGGGTTAAATGGGGCAGACAATTGCAATTTGTGTACTAAATACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR CCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCAGGTGTGCGCGCCTTTaGCAGCTACGTCCACTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TQELSVKDSWRASRIQHIRCARL*QLRPLP Trigger: GGGGAGTGGACGTAGCTGCCAAAGGCGCGCACACCT...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCACACATCAGGCAGGCTaGGGGGCGGTCAGCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: RLGIPQVGNPFQASLILVTHQAG*GAVSSE Trigger: TTCAGAGCTGACCGCCCCCCAGCCTGCCTGATGTGT...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CAA 90 bp | GCCTTTGGCAGCTACGTCCACTCCCCCTCAACCTACGTCCTGCAATaGAACTGGGGAATGGTCTGTGTTGTATGTGTATGTAGTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: AFGSYVHSPSTYVLQ*NWGMVCVVCVCSVE Trigger: CTCCACACTACATACACATACAACACAGACCATTCCCCAGTTCAATTGCAGGACGTAGGTTGAGGGGGAGTGGACGTAGCTGCCAAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR TCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCCAGTTTCGACATGCATaGGGCAGGGCCTCTTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: RLGIPQVGNPFQASLILVQFRHA*GRASFG Trigger: TCCGAAAGAGGCCCTGCCTCATGCATGTCGAAACTG...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATCCTTCCTTTGTCAATTaGCCTGAAGAAGCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: CSQLDVSITFSLCLTKRNPSFVN*PEEALP Trigger: GGGGAGGGCTTCTTCAGGGCAATTGACAAAGGAAGG...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATTATGTGTATGTAGTGTaGAGCATGGGAGGAGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SEQLGGSPWAMHISTKSNYVYVV*SMGGVR Trigger: CCTTACTCCTCCCATGCTCCACACTACATACACATA...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATGTCCTGCAATTGAACTaGGGAATGGTCTGTGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SEQLGGSPWAMHISTKSNVLQLN*GMVCVV Trigger: TACAACACAGACCATTCCCCAGTTCAATTGCAGGAC...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGACACAAGAAGAACCTTaGTCTCCTGACAGCAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: PSPMPFIYISRNRLWCGQTQEEP*SPDSRV Trigger: TACTCTGCTGTCAGGAGAGCAAGGTTCTTCTTGTGT...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGAAGTGTGAAAGACAGCTaGAGAGCATCCAGAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: SPMPFIYISRNRLWCGQRSVKDS*RASRIQ Trigger: TTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACT...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CAA 90 bp | GCTTTGCTAAAATCACTCCGACTAATATCATTAAAGACTAGATCTTaGTTTGGCCTGCAGGGTTTGCACAGACTCGGGATTCCACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: ALLKSLRLISLKTRS*FGLQGLHRLGIPQV Trigger: CACTTGTGGAATCCCGAGTCTGTGCAAACCCTGCAGGCCAAACAAAGATCTAGTCTTTAATGATATTAGTCGGAGTGATTTTAGCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CCA 72 bp | GAGGCAGGGCCTCTTTCGGAAAGGTGTGCGCGCCTTTaGCAGCTACGTCCACTCCCCCTCAACCTACGTCCT | + |
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Preference number: 3 (lower is better) Translates to: EAGPLSERCARL*QLRPLPLNLRP Trigger: AGGACGTAGGTTGAGGGGGAGTGGACGTAGCTGCCAAAGGCGCGCACACCTTTCCGAAAGAGGCCCTGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR TCA 72 bp | GCTCACTGGACCTCACATAATGCCCAGGGAATGTTCTaGGCTCAGAACAGCTGGGCGGCTCCCCATGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: AHWTSHNAQGMF*AQNSWAAPHGQ Trigger: TTGCCCATGGGGAGCCGCCCAGCTGTTCTGAGCTCAGAACATTCCCTGGGCATTATGTGAGGTCCAGTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR TCA 72 bp | GGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTaGTTCTTGTCATGCCAGGTGGTGCTCACTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: GFHKWEIPSKPL*FLSCQVVLTGP Trigger: AGGTCCAGTGAGCACCACCTGGCATGACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CCA 72 bp | TGGACAGAGACGCAAGAGTTGAGTGTGAAAGACAGCTaGAGAGCATCCAGAATCCAACACATCAGGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: WTETQELSVKDS*RASRIQHIRQA Trigger: AGCCTGCCTGATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGTCTCTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR TCA 72 bp | GCTACGTCCACTCCCCCTCAACCTACGTCCTGCAATTaGACTGGGGAATGGTCTGTGTTGTATGTGTATGTA | + |
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Preference number: 3 (lower is better) Translates to: ATSTPPQPTSCN*TGEWSVLYVYV Trigger: TACATACACATACAACACAGACCATTCCCCAGTTCAATTGCAGGACGTAGGTTGAGGGGGAGTGGACGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CCA 72 bp | GTCCACTCCCCCTCAACCTACGTCCTGCAATTGAACTaGGGAATGGTCTGTGTTGTATGTGTATGTAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VHSPSTYVLQLN*GMVCVVCVCSV Trigger: CACACTACATACACATACAACACAGACCATTCCCCAGTTCAATTGCAGGACGTAGGTTGAGGGGGAGTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR-3UTR CAA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCGGGGAATGGTCTGTGTaGTATGTGTATGTAGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: RLGIPQVGNPFQASLILVGEWSV*YVYVVW Trigger: CCACACTACATACACATACAACACAGACCATTCCCC...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR GCA 72 bp | ATATACAATACACCATCTTTAGCCTCAGTTTCGACATaGATGAGGCAGGGCCTCTTTCGGAAAGGTGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: IYNTPSLASVST*MRQGLFRKGVR Trigger: GCGCACACCTTTCCGAAAGAGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR GCA 72 bp | AGGGTCTTTAGAAACCCTTCTGATACTGACCTATGCTaGAGCCAGCTGGATGTCTCTATCACATTCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: RVFRNPSDTDLC*SQLDVSITFSL Trigger: CAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCAGCATAGGTCAGTATCAGAAGGGTTTCTAAAGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CCA 72 bp | GCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTaGACAGAGACGCAAGAGTTGAGTGTGAAAGACAGC | + |
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Preference number: 3 (lower is better) Translates to: ALYIHKQKQAMV*TETQELSVKDS Trigger: GCTGTCTTTCACACTCAACTCTTGCGTCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATGCCGGAGCTCCTCAGTaGACGCTCCTCCAGTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNAGAPQ*TLLQSA Trigger: CGCGGACTGGAGGAGCGTCCACTGAGGAGCTCCGGC...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCCTGTCGCGCCCCAAGTaGTCTCGGCGCCGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHILSRPK*SRRRPG Trigger: TCCTGGCCGGCGCCGAGATCACTTGGGGCGCGACAG...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATGTGCAAAAGACGTGCTaGGCAGCCGGAGCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNVQKTC*AAGAPQ Trigger: CTGAGGAGCTCCGGCTGCCCAGCACGTCTTTTGCAC...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCCCAGGCGCCCGTCAGTaGTCACCACATGGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHIPGARQ*SPHGGP Trigger: GGGGCCTCCATGTGGTGACCACTGACGGGCGCCTGG...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CAA 72 bp | ACCCCCATGTTCCTGAACGCCACTGAAGTCCTTCCTTaGTCAATTGCCCTGAAGAAGCCCTCCCCCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: TPMFLNATEVLP*SIALKKPSPMP Trigger: GGGCATGGGGGAGGGCTTCTTCAGGGCAATTGACAAAGGAAGGACTTCAGTGGCGTTCAGGAACATGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATTCACCCACAAATGCCTaGCTGGCAGAGGTGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNSPTNA*LAEVCA Trigger: AGCACACACCTCTGCCAGTCAGGCATTTGTGGGTGA...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATACACAAGGCTCTCCCTaGTTGAGCAGGTGCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNTQGSP*LSRCQV Trigger: GACTTGGCACCTGCTCAATCAGGGAGAGCCTTGTGT...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGGTGCGTCTCTACTCCTaGCTCCACCAACGCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQVRLYS*LHQRPI Trigger: GATGGGGCGTTGGTGGAGGCAGGAGTAGAGACGCAC...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATTCCACTTTCACCAACTaGCATTCGGAGCGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNSTFTN*HSERRL Trigger: CAGCCTGCGCTCCGAATGGCAGTTGGTGAAAGTGGA...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATTCCTCCTGCTTGGGATaGAAGAGCAGGCTCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNSSCLG*KSRLWM Trigger: CATCCAGAGCCTGCTCTTCCATCCCAAGCAGGAGGA...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATTCGAGATCCCCTTCGTaGCCTTTCCTCCTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNSRSPS*PFLLSV Trigger: GACAGAGAGGAGGAAAGGCCACGAAGGGGATCTCGA...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATGGCCAGGACCCATGTTaGCAAGAGCAGCAGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNGQDPC*QEQQPS Trigger: ACTGGGCTGCTGCTCTTGTCAACATGGGTCCTGGCC...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATCTCACTTTGGCTCACTaGCCCGATCATCTCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNLTLAH*PDHLLF Trigger: GAACAGGAGATGATCGGGTCAGTGAGCCAAAGTGAG...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCCGAGTCCCCGGTCAGTaGAAAAGACGTGCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHIRVPGQ*KRRAGQ Trigger: CTGCCCAGCACGTCTTTTGCACTGACCGGGGACTCG...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATGGCGTGATGCGTTCATaGATGAGTTGCCATCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNGVMRS*MSCHRL Trigger: CAGACGATGGCAACTCATGCATGAACGCATCACGCC...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATATTGTGGCCCTGTTCTaGCACCAGGCGCCCGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNIVALF*HQAPVS Trigger: ACTGACGGGCGCCTGGTGGCAGAACAGGGCCACAAT...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATATGGCAGAGCTGCTATaGCCAGCGCTGGAGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNMAELL*PALEST Trigger: GGTGGACTCCAGCGCTGGGCATAGCAGCTCTGCCAT...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCGTTCTCCGCTGCCCGTaGCAAGAGAGGAGGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHIVLRCP*QERRQH Trigger: GTGTTGCCTCCTCTCTTGCCACGGGCAGCGGAGAAC...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGCCTCTCGCGAACCCTTaGTGTGAGGACGGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQPLANP*CEDGFL Trigger: AAGGAAGCCGTCCTCACACCAAGGGTTCGCGAGAGG...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCCCCAGTCCTCCTGCTTaGGATGGAAGAGCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVPSPPA*DGRAGS Trigger: AGAGCCTGCTCTTCCATCCCAAGCAGGAGGACTGGG...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCACAGACACAGGGTTCTaGCACCACCGACCCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVTDTGF*HHRPRV Trigger: TACTCTGGGTCGGTGGTGTCAGAACCCTGTGTCTGT...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCTGGCAATGCTTCCTATaGCCCGCGTGTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVWQCFL*PACPAL Trigger: AAGAGCTGGACACGCGGGTCATAGGAAGCATTGCCA...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATACTGGGCCACACAACTaGACTGATGTTGACGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNTGPHN*TDVDVL Trigger: AAGGACGTCAACATCAGTGCAGTTGTGTGGCCCAGT...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCTCAGTGGTCACCACATaGAGGCCCCGAGGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVSVVTT*RPRGAF Trigger: AAAAGCTCCTCGGGGCCTCCATGTGGTGACCACTGA...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCCCCCTTCATCTGAGCTaGTCAGTACACTGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVPLHLS*SVHCSP Trigger: TGGAGAGCAGTGTACTGATCAGCTCAGATGAAGGGG...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATGGACAACCAAGGAGCTaGTGTCAATGGAGCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNGQPRS*CQWSGQ Trigger: TTGCCCGCTCCATTGACATCAGCTCCTTGGTTGTCC...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGATTCGGAGCGCAGGCTaGAGTGGCCAAAAACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQIRSAG*SGQKLS Trigger: TGACAGTTTTTGGCCACTTCAGCCTGCGCTCCGAAT...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCAAGGCTCTCCCTGATTaGGCAGGTGCCAAGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVKALPD*AGAKSQ Trigger: TTGAGACTTGGCACCTGCTCAATCAGGGAGAGCCTT...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTGTGAGGGTCCCTAGCTaGCTGGGCCACACAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPVRVPS*LGHTTA Trigger: TGCAGTTGTGTGGCCCAGTCAGCTAGGGACCCTCAC...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAAGGGCAGTAAACAGTaGACTGGGCTTCCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQKGSKQ*TGLPLR Trigger: CCTGAGAGGAAGCCCAGTGCACTGTTTACTGCCCTT...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATTCAGAGAGCTGCAGATaGAAGTGTAGGGAACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNSESCR*KCREQK Trigger: CTTCTGTTCCCTACACTTGCATCTGCAGCTCTCTGA...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATAATGACCTGGACACCTaGCTTCAGCTCAAACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SEQLGGSPWAMHISTKSNNDLDT*LQLKLY Trigger: GTACAGTTTGAGCTGAAGCCAGGTGTCCAGGTCATT...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCGGCGCCATAATCTACTaGCCTCCACAGAGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHIGAIIY*PPQRTL Trigger: GAGAGTTCTCTGTGGAGGTCAGTAGATTATGGCGCC...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGCTTGGATTCTGCAGGTaGGGTAGTGGGCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQLGFCR*GSGHIH Trigger: ATGGATATGCCCACTACCTCACCTGCAGAATCCAAG...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGCCTCTGCAAGGAATGTaGAAGAGATGCTGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQPLQGM*KRCCCP Trigger: TGGACAGCAGCATCTCTTTCACATTCCTTGCAGAGG...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATCGTTCATGCATGAGTTaGCATCGTCTGCCGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNRSCMS*HRLPKS Trigger: GGACTTCGGCAGACGATGGCAACTCATGCATGAACG...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATGTCCTCACTTCCATGTaGACCAGGTCTGCCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNVLTSM*TRSASL Trigger: TAAGGAGGCAGACCTGGTGCACATGGAAGTGAGGAC...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGACAGGCGCTGTGTCCTTaGTGGAGATTCTTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPMPFIYISRNRLWCGQRQALCP*WRFFQR Trigger: CCTCTGGAAGAATCTCCAGCAAGGACACAGCGCCTG...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCAGCTTTGACCAAGGCTaGAGTCCTTTGAAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVSFDQG*SPLKGK Trigger: CTTCCCCTTCAAAGGACTGCAGCCTTGGTCAAAGCT...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCCCTTTGTGCTCTCGCTaGTTGCAATGGTGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHIPLCSR*LQWWQC Trigger: GCATTGCCACCATTGCAAGCAGCGAGAGCACAAAGG...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCCCACAAATGCCTGACTaGCAGAGGTGTGTGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVPQMPD*QRCVLH Trigger: ATGAAGCACACACCTCTGCCAGTCAGGCATTTGTGG...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGGGCACACTGAGCGCCTaGCTTGCGTTTCTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQGTLSA*LAFLEY Trigger: ATATTCAAGAAACGCAAGCCAGGCGCTCAGTGTGCC...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCATGAAGGTTGCATTGTaGCCCTGTTCTGCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHIMKVAL*PCSATR Trigger: CCTGGTGGCAGAACAGGGCCACAATGCAACCTTCAT...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCTTCCCAGCAGCAACCTaGACAGTGATGGTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVFPAAT*TVMVLV Trigger: AACCAACACCATCACTGTCCAGGTTGCTGCTGGGAA...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| 3UTR CAA 72 bp | AGCTACGTCCACTCCCCCTCAACCTACGTCCTGCAATaGAACTGGGGAATGGTCTGTGTTGTATGTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SYVHSPSTYVLQ*NWGMVCVVCVC Trigger: ACATACACATACAACACAGACCATTCCCCAGTTCAATTGCAGGACGTAGGTTGAGGGGGAGTGGACGTAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATTTTTCCTTTCCCCCATaGCACAAGGCTCTCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNFSFPP*HKALPD Trigger: ATCAGGGAGAGCCTTGTGTCATGGGGGAAAGGAAAA...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATCTTTTGTGTCTTGGATaGGGGCATTCCCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNLLCLG*GHSQQQ Trigger: TTGCTGCTGGGAATGCCCTCATCCAAGACACAAAAG...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGGGGTTTTCAGAGAGCTaGAGATGCAAGTGTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQGFSES*RCKCRE Trigger: TTCCCTACACTTGCATCTGCAGCTCTCTGAAAACCC...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTCCGACCAGTGCACCATaGCTTGGTTATGAGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPPTSAP*LGYEPS Trigger: ACTCGGCTCATAACCAAGCCATGGTGCACTGGTCGG...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCTTGGGCAGCTTTATCTaGGCAAAGGCTTCTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVLGSFI*AKASLR Trigger: TCGAAGAGAAGCCTTTGCCCAGATAAAGCTGCCCAA...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCTTGGCAAGGAGTACTTaGGCAGCTTTATCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVLARST*AALSGQ Trigger: TTGCCCAGATAAAGCTGCCCAAGTACTCCTTGCCAA...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTTCTCAGGTCCACATCTaGAGCTTGCAGGAGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPSQVHI*SLQETP Trigger: TGGCGTCTCCTGCAAGCTCCAGATGTGGACCTGAGA...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATGCGCTGTGTCCTTGCTaGAGATTCTTCCAGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNALCPC*RFFQRN Trigger: ATTCCTCTGGAAGAATCTCCAGCAAGGACACAGCGC...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATGGTGCATTCTCACTTTaGCTCACTGACCCGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNGAFSL*LTDPII Trigger: GATGATCGGGTCAGTGAGCCAAAGTGAGAATGCACC...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCCCAGGAATATCCCCTTaGTACCTGCTACCTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVPGISP*YLLPHI Trigger: TATATGAGGTAGCAGGTATCAAGGGGATATTCCTGG...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGAGGCCAAAAACTGTCATaGTGTGCGTCTCTACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPMPFIYISRNRLWCGQRGQKLS*CASLLL Trigger: CAGGAGTAGAGACGCACATCATGACAGTTTTTGGCC...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCTGGATGTTTGTCCTTTaGAGGTCACCCTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHIWMFVL*RSPSSI Trigger: AATGGAGGAGGGTGACCTTCAAAGGACAAACATCCA...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTCATGTGCACCAGGTCTaGCTCCTTATCCAGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPHVHQV*LLIQSR Trigger: TCTGGACTGGATAAGGAGGCAGACCTGGTGCACATG...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCTCGGTACTGATAATGTaGATGTCCTTTGGCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVSVLIM*MSFGKE Trigger: CTCCTTGCCAAAGGACATGCACATTATCAGTACCGA...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGGGTGTTGGTTCCCTCTaGAAGGAATGTGAAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQGVGSL*KECERD Trigger: ATCTCTTTCACATTCCTTGCAGAGGGAACCAACACC...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCACGACACGTAGTAGCTaGCTCGTCCACCTATTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHITTRSS*LVHLLL Trigger: TAACAATAGGTGGACGAGCCAGCTACTACGTGTCGT...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATAATGTGCATGTCCTTTaGCAAGGAGTACTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNNVHVL*QGVLGQ Trigger: CTGCCCAAGTACTCCTTGCCAAAGGACATGCACATT...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGAAAAGCTGGGACACACTaGCTCTCTCCATGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPMPFIYISRNRLWCGQRKAGTH*LSPCLS Trigger: TGAGAGACATGGAGAGAGCCAGTGTGTCCCAGCTTT...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTGTTGTACCAGAAAGCTaGGACACACTGGCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPVVPES*DTLALS Trigger: GGAGAGAGCCAGTGTGTCCCAGCTTTCTGGTACAAC...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGGAGGATCTGGTCTTCTaGGACACTGGTCACTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQEDLVF*DTGHFN Trigger: ATTAAAGTGACCAGTGTCCCAGAAGACCAGATCCTC...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGAAAAGAGGCAGCAATGTaGAACCATACTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPMPFIYISRNRLWCGQRKEAAM*NHTCPR Trigger: CCTGGGACAAGTATGGTTTCACATTGCTGCCTCTTT...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCCTGGCTTGCGTTTCTTaGATATTTTCCTTTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHILACVS*IFSFPP Trigger: TGGGGGAAAGGAAAATATTCAAGAAACGCAAGCCAG...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTAATGAAAAGCTCTGCTaGAGTAGGGAGACCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPNEKLC*SRETRE Trigger: TTCCCGGGTCTCCCTACTTCAGCAGAGCTTTTCATT...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGATCCACCTTCTTGTTTaGCAGGAATATCCCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPMPFIYISRNRLWCGQIHLLV*QEYPLD Trigger: ATCAAGGGGATATTCCTGGCAAACAAGAAGGTGGAT...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCACATTGCCAATGTCTTaGCTCCACTCAGGGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: TQELSVKDSWRASRIQHITLPMS*LHSGIS Trigger: TGATATCCCTGAGTGGAGGCAAGACATTGGCAATGT...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAGAGGTGTGTGCTTCATaGCCACCAGAGCACCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLEVCAS*PPEHHP Trigger: GGGGTGGTGCTCTGGTGGCCATGAAGCACACACCTC...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGACATCTGTGCAGTTGTTaGATACAATCCTCCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SPMPFIYISRNRLWCGQRHLCSC*IQSSGT Trigger: GGTACCGGAGGATTGTATCCAACAACTGCACAGATG...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCTGTCAAGTTCTTAGGTaGGAGAATGAAAAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGIPQVGNPFQASLILVCQVLR*ENEKLC Trigger: GCAGAGCTTTTCATTCTCCCACCTAAGAACTTGACA...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CAA 72 bp | TCATTAAAGACTAGATCTTTGTTTGGCCTGCAGGGTTaGCACAGACTCGGGATTCCACAAGTGGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLKTRSLFGLQG*HRLGIPQVGNP Trigger: GGGATTTCCCACTTGTGGAATCCCGAGTCTGTGCAAACCCTGCAGGCCAAACAAAGATCTAGTCTTTAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTTACTTGTCCCAGGAATaGCCCTCATCAAAACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPYLSQE*PSSKLT Trigger: GGTGAGTTTTGATGAGGGCCATTCCTGGGACAAGTA...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTATCCACATCTGGAGCTTaGAGGAGACGCCAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLSTSGA*RRRQSL Trigger: CAGGGATTGGCGTCTCCTGCAAGCTCCAGATGTGGA...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAACTGGCAGAGGTGTGTaGTTCATGGCCACCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLTGRGV*FMATRA Trigger: TGCTCTGGTGGCCATGAAGCACACACCTCTGCCAGT...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTGAGTGTGATTTTGGGTaGATTCTCACTTTGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPECDFG*ILTLAH Trigger: GTGAGCCAAAGTGAGAATGCACCCAAAATCACACTC...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAACAGCCACGAGGATCTaGTCTTCTGGGACACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLTATRI*SSGTLV Trigger: GACCAGTGTCCCAGAAGACCAGATCCTCGTGGCTGT...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| 3UTR CAA 72 bp | CAATTAGAAAACAGAGTGACAGGATCTTTAGATTCCTaGCTGCTTCCTTCGAGAGGACTGCTTTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLENRVTGSLDS*LLPSRGLLSQA Trigger: AGCCTGAGAAAGCAGTCCTCTCGAAGGAAGCAGCAAGGAATCTAAAGATCCTGTCACTCTGTTTTCTAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| 3UTR CAA 72 bp | AAGGGAACTGAAGGCCGACATCTGACTTTAAGGAAGTaGTGTACATCTGACAAGCAAAAAGCACAGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTEGRHLTLRK*CTSDKQKAQLC Trigger: GCAAAGCTGTGCTTTTTGCTTGTCAGATGTACACAACTTCCTTAAAGTCAGATGTCGGCCTTCAGTTCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATCCACCTATTGTTACCTaGATGAAGATATATTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSQLDVSITFSLCLTKRNPPIVT*MKIYSS Trigger: GGATGAATATATCTTCATTCAGGTAACAATAGGTGG...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAAAGGCTGCAGTCCTTTaGAGGGGAAGCTGGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLKAAVL*RGSWVV Trigger: TACAACCCAGCTTCCCCTTCAAAGGACTGCAGCCTT...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTATGGGGATCTCCTTTGTaGTCTCGCTGCTTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLWGSPL*SRCLQW Trigger: CCATTGCAAGCAGCGAGAGCACAAAGGAGATCCCCA...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTATCACACTCCCCAGGTTaGAGTCATAGAGCTTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLSHSPG*SHRASS Trigger: TGACGAAGCTCTATGACTTCAACCTGGGGAGTGTGA...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAAAACTCACCCACAAATaGCTGACTGGCAGAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLKLTHK*LTGRGV Trigger: CACACCTCTGCCAGTCAGGCATTTGTGGGTGAGTTT...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTACCCTTAGCCCATCTGTaGAGTTGTTGGATACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLPLAHL*SCWIQS Trigger: GGATTGTATCCAACAACTGCACAGATGGGCTAAGGG...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAACGGCTGCAAACACTTaGTTCTCATCGGTACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLTAANT*FSSVLI Trigger: TATCAGTACCGATGAGAACCAAGTGTTTGCAGCCGT...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR TCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTATGCCTTTGTTGTAAGTaGTGTATGTCTTCACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLCLCCK*CMSSPG Trigger: ACCAGGTGAAGACATACATCACTTACAACAAAGGCA...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR GCA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAGAAGTATTCATGTACTaGAATCTCTTTTGTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLPKLSICLLFMTVNKRLEVFMY*NLFCVL Trigger: CAAGACACAAAAGAGATTGCAGTACATGAATACTTC...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 90 bp | GGGCTTGGGGGCTGCGCCCGGCGAGTCCTCCTCGCACTGCCCGCCTaGCTAGGAGATGGAATGCCCGGGACCCACCTAGCGCCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGGCARRVLLALPA*LGDGMPGTHLAPSG Trigger: GCCTGAAGGCGCTAGGTGGGTCCCGGGCATTCCATCTCCTAGCCAGGCGGGCAGTGCGAGGAGGACTCGCCGGGCGCAGCCCCCAAGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 90 bp | CTGCGCCCGGCGAGTCCTCCTCGCACTGCCCGCCTGGCTAGGAGATaGAATGCCCGGGACCCACCTAGCGCCTTCAGGCGACATTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRPASPPRTARLARR*NARDPPSAFRRHSR Trigger: GCGGGAATGTCGCCTGAAGGCGCTAGGTGGGTCCCGGGCATTCCATCTCCTAGCCAGGCGGGCAGTGCGAGGAGGACTCGCCGGGCGCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 90 bp | CAGTCCGTATCTCCCCGCGGCTCGCCTGGGATAGTGGCTCTAGCCTaGACCGGCGTCTCGGTGCAGCGGCTCTCCGTGCAGATGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSVSPRGSPGIVALA*TGVSVQRLSVQMPA Trigger: AGCTGGCATCTGCACGGAGAGCCGCTGCACCGAGACGCCGGTCCAGGCTAGAGCCACTATCCCAGGCGAGCCGCGGGGAGATACGGACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 90 bp | CTCTCGCGAACCCTTGGTGTGAGGACGGCTTCCTTTGGCACCATCTaGGAGAGCAGTAGCCCAAGAGTCCCCGCGCTCCAGGGGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSRTLGVRTASFGTI*ESSSPRVPALQGAW Trigger: CCAAGCCCCCTGGAGCGCGGGGACTCTTGGGCTACTGCTCTCGCAGATGGTGCCAAAGGAAGCCGTCCTCACACCAAGGGTTCGCGAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 90 bp | TGGCTTGGTTATGAGCCGAGTCCCCGGTCAGTGCAAAAGACGTGCTaGGCAGCCGGAGCTCCTCAGTGGACGCTCCTCCAGTCCGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WLGYEPSPRSVQKTC*AAGAPQWTLLQSAS Trigger: CGACGCGGACTGGAGGAGCGTCCACTGAGGAGCTCCGGCTGCCCAGCACGTCTTTTGCACTGACCGGGGACTCGGCTCATAACCAAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 90 bp | GCCATAGTCACATTCGAAGTCCCAGTCCGCACAGACACAGGGTTCTaGCACCACCGACCCAGAGTACTCTCTGCCAAGGGCACACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AIVTFEVPVRTDTGF*HHRPRVLSAKGTLS Trigger: GCTCAGTGTGCCCTTGGCAGAGAGTACTCTGGGTCGGTGGTGTCAGAACCCTGTGTCTGTGCGGACTGGGACTTCGAATGTGACTATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATCCAGTGCACCATGGCTaGGTTATGAGCCGAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEQLGGSPWAMHISTKSNPVHHG*VMSRVP Trigger: GGGGACTCGGCTCATAACCAAGCCATGGTGCACTGG...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCCGCGTGTCCAGCTCTTaGTCCAGCAGCTCCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLGIPQVGNPFQASLILVRVSSS*SSSSSG Trigger: GCCCGAGGAGCTGCTGGACAAAGAGCTGGACACGCG...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 90 bp | GTGGGCATATCCATCTGCCGTCCTCACTTCCATGTGCACCAGGTCTaGCTCCTTATCCAGTCCAGACACCGACCAGTAAAACCTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGISICRPHFHVHQV*LLIQSRHRPVKPVG Trigger: CCCAACAGGTTTTACTGGTCGGTGTCTGGACTGGATAAGGAGGCAGACCTGGTGCACATGGAAGTGAGGACGGCAGATGGATATGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATCCAGGCGCTGTGTCCTaGCTGGAGATTCTTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEQLGGSPWAMHISTKSNPGAVS*LEILPE Trigger: CTCTGGAAGAATCTCCAGCAAGGACACAGCGCCTGG...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 90 bp | GGTTCTGACACCACCGACCCAGAGTACTCTCTGCCAAGGGCACACTaGGCGCCTGGCTTGCGTTTCTTGAATATTTTCCTTTCCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GSDTTDPEYSLPRAH*APGLRFLNIFLSPM Trigger: CATGGGGGAAAGGAAAATATTCAAGAAACGCAAGCCAGGCGCTCAGTGTGCCCTTGGCAGAGAGTACTCTGGGTCGGTGGTGTCAGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 90 bp | CACCACCGACCCAGAGTACTCTCTGCCAAGGGCACACTGAGCGCCTaGCTTGCGTTTCTTGAATATTTTCCTTTCCCCCATGACACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHRPRVLSAKGTLSA*LAFLEYFPFPHDTR Trigger: CCTTGTGTCATGGGGGAAAGGAAAATATTCAAGAAACGCAAGCCAGGCGCTCAGTGTGCCCTTGGCAGAGAGTACTCTGGGTCGGTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 90 bp | AGCTCTGCTGAAGTAGGGAGACCCGGGAACACAGCCACGAGGATCTaGTCTTCTGGGACACTGGTCACTTTAATCAGAGCTCGCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSAEVGRPGNTATRI*SSGTLVTLIRARLM Trigger: CATCAAGCGAGCTCTGATTAAAGTGACCAGTGTCCCAGAAGACCAGATCCTCGTGGCTGTGTTCCCGGGTCTCCCTACTTCAGCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATGCGTTCATGCATGAGTaGCCATCGTCTGCCGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SEQLGGSPWAMHISTKSNAFMHE*PSSAEV Trigger: GACTTCGGCAGACGATGGCAACTCATGCATGAACGC...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 90 bp | GTACCCAGTGCTGTTAAGGTAGCTTTGACCAAGGCTGCAGTCCTTTaGAGGGGAAGCTGGGTTGTACCAGAAAGCTGGGACACACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPSAVKVALTKAAVL*RGSWVVPESWDTLA Trigger: AGCCAGTGTGTCCCAGCTTTCTGGTACAACCCAGCTTCCCCTTCAAAGGACTGCAGCCTTGGTCAAAGCTACCTTAACAGCACTGGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 90 bp | GTGGTCACCACATGGAGGCCCCGAGGAGCTTTTCCAGGACACAACTaGGTCTTAGCAGAGTACTTATCCCTTAGCCCATCTGTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVTTWRPRGAFPGHN*VLAEYLSLSPSVQL Trigger: CAACTGCACAGATGGGCTAAGGGATAAGTACTCTGCTAAGACTCAGTTGTGTCCTGGAAAAGCTCCTCGGGGCCTCCATGTGGTGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 90 bp | CCTCCTCTCTGTCAAGTTCTTAGGTGGGAGAATGAAAAGCTCTGCTaGAGTAGGGAGACCCGGGAACACAGCCACGAGGATCTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPLCQVLRWENEKLC*SRETREHSHEDLVF Trigger: GAAGACCAGATCCTCGTGGCTGTGTTCCCGGGTCTCCCTACTTCAGCAGAGCTTTTCATTCTCCCACCTAAGAACTTGACAGAGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 90 bp | ACACACCGATATCCGTATAGGAGAGTTCGGAGCCAATATTACCCGTaGCAACCACAAGTCCAGGCGCTGTGTCCTTGCTGGAGATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: THRYPYRRVRSQYYP*QPQVQALCPCWRFF Trigger: GAAGAATCTCCAGCAAGGACACAGCGCCTGGACTTGTGGTTGCCACGGGTAATATTGGCTCCGAACTCTCCTATACGGATATCGGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGCAAGGCTGCAGTCCTTaGAAGGGGAAGCTGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPMPFIYISRNRLWCGQQGCSP*KGKLGC Trigger: ACAACCCAGCTTCCCCTTCAAAGGACTGCAGCCTTG...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS GCA 90 bp | AGCCAATATTACCCGTGGCAACCACAAGTCCAGGCGCTGTGTCCTTaGTGGAGATTCTTCCAGAGGAATATGGGTTTTCAGAGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQYYPWQPQVQALCP*WRFFQRNMGFQRAA Trigger: TGCAGCTCTCTGAAAACCCATATTCCTCTGGAAGAATCTCCAGCAAGGACACAGCGCCTGGACTTGTGGTTGCCACGGGTAATATTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS GCA 90 bp | ACTGGGCCACACAACTGCACTGATGTTGACGTCCTTATTCCGTATTaGGACGAATGGGACTCGAAGGTGAACGTGTTCCACTGGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGPHNCTDVDVLIPY*DEWDSKVNVFHWTN Trigger: GTTTGTCCAGTGGAACACGTTCACCTTCGAGTCCCATTCGTCGCAATACGGAATAAGGACGTCAACATCAGTGCAGTTGTGTGGCCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATAGTATGACACTGCTGTaGTGTCCCGACCAGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: CSQLDVSITFSLCLTKRNSMTLL*CPDQCT Trigger: GGTGCACTGGTCGGGACACAACAGCAGTGTCATACT...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATAATGTGAAACCATACTaGTCCCAGGAATGGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SEQLGGSPWAMHISTKSNNVKPY*SQEWPS Trigger: TGAGGGCCATTCCTGGGACAAGTATGGTTTCACATT...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGAGTCTCAAAGTCCTCCTaGGTACAGCGCCGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPMPFIYISRNRLWCGQRVSKSS*VQRRLK Trigger: CTTCAGCCGGCGCTGTACCAAGGAGGACTTTGAGAC...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATGAAGGGGAAGCTGGGTaGTACCAGAAAGCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CSQLDVSITFSLCLTKRNEGEAG*YQKAGT Trigger: TGTCCCAGCTTTCTGGTACAACCCAGCTTCCCCTTC...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TCAGAACAGCTGGGCGGCTCCCCATGGGCAATGCACATATCCACGAAATCCAATATCATCTCCTGTTCCTaGTCATGTTGGACTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEQLGGSPWAMHISTKSNIISCS*SCWTWA Trigger: TGCCCAAGTCCAACATGACAAGGAACAGGAGATGAT...ATTGGATTTCGTGGATATGTGCATTGCCCATGGGGAGCCGCCCAGCTGTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 90 bp | ATGTTGACGTCCTTATTCCGTATTGCGACGAATGGGACTCGAAGGTaGACGTGTTCCACTGGACAAACCACATGCAGGAAGAGGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MLTSLFRIATNGTRR*TCSTGQTTCRKRKA Trigger: AGCCTTCCTCTTCCTGCATGTGGTTTGTCCAGTGGAACACGTTCACCTTCGAGTCCCATTCGTCGCAATACGGAATAAGGACGTCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 90 bp | CAATATTACCCGTGGCAACCACAAGTCCAGGCGCTGTGTCCTTGCTaGAGATTCTTCCAGAGGAATATGGGTTTTCAGAGAGCTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QYYPWQPQVQALCPC*RFFQRNMGFQRAAD Trigger: ATCTGCAGCTCTCTGAAAACCCATATTCCTCTGGAAGAATCTCCAGCAAGGACACAGCGCCTGGACTTGTGGTTGCCACGGGTAATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 90 bp | CACAACTGCACTGATGTTGACGTCCTTATTCCGTATTGCGACGAATaGGACTCGAAGGTGAACGTGTTCCACTGGACAAACCACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HNCTDVDVLIPYCDE*DSKVNVFHWTNHMQ Trigger: CTGCATGTGGTTTGTCCAGTGGAACACGTTCACCTTCGAGTCCCATTCGTCGCAATACGGAATAAGGACGTCAACATCAGTGCAGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 90 bp | GGCTCGGTGAAGTCACTGAGTGTGATTTTGGGTGCATTCTCACTTTaGCTCACTGACCCGATCATCTCCTGTTCCTTGTCATGTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSVKSLSVILGAFSL*LTDPIISCSLSCWT Trigger: AGTCCAACATGACAAGGAACAGGAGATGATCGGGTCAGTGAGCCAAAGTGAGAATGCACCCAAAATCACACTCAGTGACTTCACCGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTGTCCACATCTGGAGCTaGCAGGAGACGCCAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPVHIWS*QETPIP Trigger: AGGGATTGGCGTCTCCTGCAAGCTCCAGATGTGGAC...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGCCATCTGTGCAGTTGTaGGATACAATCCTCCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPMPFIYISRNRLWCGQPSVQL*DTILRY Trigger: GTACCGGAGGATTGTATCCAACAACTGCACAGATGG...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TGCAGCCAGCTGGATGTCTCTATCACATTCTCCCTGTGTCTCACAAAGAGGAATAGCCCATCTGTGCAGTaGTTGGATACAATCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSQLDVSITFSLCLTKRNSPSVQ*LDTILR Trigger: CCGGAGGATTGTATCCAACAACTGCACAGATGGGCT...ATTCCTCTTTGTGAGACACAGGGAGAATGTGATAGAGACATCCAGCTGGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGTGGACAGTGATGGTGTaGGTTCCCTCTGCAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPMPFIYISRNRLWCGQWTVMV*VPSARN Trigger: ATTCCTTGCAGAGGGAACCAACACCATCACTGTCCA...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCGCTCGCTTGATGACATaGCCAATGTCTTGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQELSVKDSWRASRIQHIARLMT*PMSCLH Trigger: GTGGAGGCAAGACATTGGCAATGTCATCAAGCGAGC...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 90 bp | CTGGAGATTCTTCCAGAGGAATATGGGTTTTCAGAGAGCTGCAGATaGAAGTGTAGGGAACAGAAGGGCAGTAAACAGTGCACTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LEILPEEYGFSESCR*KCREQKGSKQCTGL Trigger: AAGCCCAGTGCACTGTTTACTGCCCTTCTGTTCCCTACACTTGCATCTGCAGCTCTCTGAAAACCCATATTCCTCTGGAAGAATCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCTTTGGCAAGGAGTACTaGGGCAGCTTTATCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQELSVKDSWRASRIQHIFGKEY*GSFIWA Trigger: TGCCCAGATAAAGCTGCCCAAGTACTCCTTGCCAAA...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCGACGGCTGCAAACACTaGGTTCTCATCGGTACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TQELSVKDSWRASRIQHIDGCKH*VLIGTD Trigger: ATCAGTACCGATGAGAACCAAGTGTTTGCAGCCGTC...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGGCCAGGAATATCCCCTaGATACCTGCTACCTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPMPFIYISRNRLWCGQARNIP*IPATSY Trigger: ATATGAGGTAGCAGGTATCAAGGGGATATTCCTGGC...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | ACGCAAGAGTTGAGTGTGAAAGACAGCTGGAGAGCATCCAGAATCCAACACATCGCTGTTAAGGTAGCTTaGACCAAGGCTGCAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TQELSVKDSWRASRIQHIAVKVA*TKAAVL Trigger: AAGGACTGCAGCCTTGGTCAAAGCTACCTTAACAGC...GATGTGTTGGATTCTGGATGCTCTCCAGCTGTCTTTCACACTCAACTCTTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 90 bp | GAAGTCACTGAGTGTGATTTTGGGTGCATTCTCACTTTGGCTCACTaGCCCGATCATCTCCTGTTCCTTGTCATGTTGGACTTGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: EVTECDFGCILTLAH*PDHLLFLVMLDLGI Trigger: TATGCCCAAGTCCAACATGACAAGGAACAGGAGATGATCGGGTCAGTGAGCCAAAGTGAGAATGCACCCAAAATCACACTCAGTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS GCA 90 bp | TCCTTGCTGGAGATTCTTCCAGAGGAATATGGGTTTTCAGAGAGCTaGAGATGCAAGTGTAGGGAACAGAAGGGCAGTAAACAGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLLEILPEEYGFSES*RCKCREQKGSKQCT Trigger: AGTGCACTGTTTACTGCCCTTCTGTTCCCTACACTTGCATCTGCAGCTCTCTGAAAACCCATATTCCTCTGGAAGAATCTCCAGCAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTACGGCCAGGACCCATGTaGACAAGAGCAGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLPKLSICLLFMTVNKRLRPGPM*TRAAAQ Trigger: CTGGGCTGCTGCTCTTGTCAACATGGGTCCTGGCCG...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGAGACATTGCCAATGTCTaGCCTCCACTCAGGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: SPMPFIYISRNRLWCGQRDIANV*PPLRDI Trigger: GATATCCCTGAGTGGAGGCAAGACATTGGCAATGTC...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | AGACTCGGGATTCCACAAGTGGGAAATCCCTTCCAAGCCTCTCTGATTCTTGTCCTGTTCCTTGTCATGTaGGACTTGGGCATAGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLGIPQVGNPFQASLILVLFLVM*DLGIDV Trigger: AACATCTATGCCCAAGTCCAACATGACAAGGAACAG...GACAAGAATCAGAGAGGCTTGGAAGGGATTTCCCACTTGTGGAATCCCGAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTAGTTGGGGATCTCCTTaGTGCTCTCGCTGCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPSWGSP*CSRCLQ Trigger: TTGCAAGCAGCGAGAGCACAAAGGAGATCCCCAACT...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 90 bp | CTTCATCAAAGATCTGTCTCCATGTGTTGCCCCCATCAGAGGAGATaGACACACCGATATCCGTATAGGAGAGTTCGGAGCCAATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: LHQRSVSMCCPHQRR*THRYPYRRVRSQYY Trigger: GTAATATTGGCTCCGAACTCTCCTATACGGATATCGGTGTGTTCATCTCCTCTGATGGGGGCAACACATGGAGACAGATCTTTGATGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGAAGTCAAGCTGGATGTTaGTCCTTTGAAGGTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPMPFIYISRNRLWCGQRSQAGC*SFEGHP Trigger: AGGGTGACCTTCAAAGGACAAACATCCAGCTTGACT...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGTGTGGTAATCCAGATTaGGAGAGAACGATAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPMPFIYISRNRLWCGQCGNPD*ERTIRA Trigger: AGCTCTTATCGTTCTCTCCAAATCTGGATTACCACA...CTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 90 bp | AGCGCATTAAATAGTGTCTCTACAATTTGTTCGAGATCCCCTTCGTaGCCTTTCCTCCTCTCTGTCAAGTTCTTAGGTGGGAGAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SALNSVSTICSRSPS*PFLLSVKFLGGRMK Trigger: TTTCATTCTCCCACCTAAGAACTTGACAGAGAGGAGGAAAGGCCACGAAGGGGATCTCGAACAAATTGTAGAGACACTATTTAATGCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAAAGGGCCGCTCCGAGTaGTCTCAGCACATTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLPKLSICLLFMTVNKRLKGRSE*SQHILG Trigger: TCCAAGAATGTGCTGAGACAACTCGGAGCGGCCCTT...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGACTTGTCATGTTGGACTaGGGCATAGATGTTAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPMPFIYISRNRLWCGQRLVMLD*GIDVNP Trigger: TGGATTAACATCTATGCCCAAGTCCAACATGACAAG...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTAATCTGTCTCCATGTGTaGCCCCCATCAGAGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: CLPKLSICLLFMTVNKRLICLHV*PPSEEM Trigger: CATCTCCTCTGATGGGGGCAACACATGGAGACAGAT...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TATATACAATACACCATCTTTAGCCTCAGTTTCGACATGCATGAGGCAGGGCCTACAACTGCACTGATGTaGACGTCCTTATTCCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: YIQYTIFSLSFDMHEAGPTTALM*TSLFRI Trigger: AATACGGAATAAGGACGTCAACATCAGTGCAGTTGT...AGGCCCTGCCTCATGCATGTCGAAACTGAGGCTAAAGATGGTGTATTGTATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TCCCCCATGCCCTTTATATACATAAGCAGAAACAGGCTATGGTGTGGACAGAGATCTAGGAACCAGACATaGTATTCTTCATCAAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SPMPFIYISRNRLWCGQRSRNQT*YSSSKI Trigger: GATCTTTGATGAAGAATACAATGTCTGGTTCCTAGA...TCTCTGTCCACACCATAGCCTGTTTCTGCTTATGTATATAAAGGGCATGGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTACTGGATGTTTGTCCTTaGAAGGTCACCCTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPKLSICLLFMTVNKRLLDVCP*KVTLLH Trigger: ATGGAGGAGGGTGACCTTCAAAGGACAAACATCCAG...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS-3UTR CAA 90 bp | TGCCTCCCAAAGCTAAGCATCTGCTTACTATTTATGACGGTAAACAAAAGATTATTAATCAGAGCTCGCTaGATGACATTGCCAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLPKLSICLLFMTVNKRLLIRAR*MTLPMS Trigger: AGACATTGGCAATGTCATCAAGCGAGCTCTGATTAA...TAATCTTTTGTTTACCGTCATAAATAGTAAGCAGATGCTTAGCTTTGGGAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS GCA 72 bp | GGACCGGCGTCTCGGTGCAGCGGCTCTCCGTGCAGATaGCAGCTCCTCAGGCCACCGGTTCTCCGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GPASRCSGSPCR*QLLRPPVLRCP Trigger: CGGGCAGCGGAGAACCGGTGGCCTGAGGAGCTGGCATCTGCACGGAGAGCCGCTGCACCGAGACGCCGGTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 72 bp | GGCTGCGCCCGGCGAGTCCTCCTCGCACTGCCCGCCTaGCTAGGAGATGGAATGCCCGGGACCCACCTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GCARRVLLALPA*LGDGMPGTHLA Trigger: CGCTAGGTGGGTCCCGGGCATTCCATCTCCTAGCCAGGCGGGCAGTGCGAGGAGGACTCGCCGGGCGCAGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 72 bp | GCCCCAAGTGATCTCGGCGCCGGCCAGGACCCATGTTaGCAAGAGCAGCAGCCCAGTCCGGGCGAGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: APSDLGAGQDPC*QEQQPSPGEGC Trigger: GCACCCCTCGCCCGGACTGGGCTGCTGCTCTTGTCAACATGGGTCCTGGCCGGCGCCGAGATCACTTGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 72 bp | ACACCAGGCGCCCCGGACCTCCTGTCGCGCCCCAAGTaGTCTCGGCGCCGGCCAGGACCCATGTTGACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPGAPDLLSRPK*SRRRPGPMLTR Trigger: TCTTGTCAACATGGGTCCTGGCCGGCGCCGAGATCACTTGGGGCGCGACAGGAGGTCCGGGGCGCCTGGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 72 bp | TGCCCGTGGCAAGAGAGGAGGCAACACTGGTGGTCGTaGAGCCGGGGACACCAGGCGCCCCGGACCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CPWQERRQHWWS*SRGHQAPRTSC Trigger: ACAGGAGGTCCGGGGCGCCTGGTGTCCCCGGCTTCACGACCACCAGTGTTGCCTCCTCTCTTGCCACGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 72 bp | GTGCAAAAGACGTGCTGGGCAGCCGGAGCTCCTCAGTaGACGCTCCTCCAGTCCGCGTCGCCCTCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VQKTCWAAGAPQ*TLLQSASPSPP Trigger: AGGAGGTGAGGGCGACGCGGACTGGAGGAGCGTCCACTGAGGAGCTCCGGCTGCCCAGCACGTCTTTTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS TCA 72 bp | CGCGTCGCCCTCACCTCCTCTCGCGAACCCTTGGTGTaGGGACGGCTTCCTTTGGCACCATCTGCGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVALTSSREPLV*GRLPLAPSARA Trigger: TGCTCTCGCAGATGGTGCCAAAGGAAGCCGTCCTCACACCAAGGGTTCGCGAGAGGAGGTGAGGGCGACGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS GCA 72 bp | GGTTATGAGCCGAGTCCCCGGTCAGTGCAAAAGACGTaGTGGGCAGCCGGAGCTCCTCAGTGGACGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GYEPSPRSVQKT*WAAGAPQWTLL Trigger: GAGGAGCGTCCACTGAGGAGCTCCGGCTGCCCAGCACGTCTTTTGCACTGACCGGGGACTCGGCTCATAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 72 bp | CAGTCCGCGTCGCCCTCACCTCCTCTCGCGAACCCTTaGTGTGAGGACGGCTTCCTTTGGCACCATCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: QSASPSPPLANP*CEDGFLWHHLR Trigger: TCGCAGATGGTGCCAAAGGAAGCCGTCCTCACACCAAGGGTTCGCGAGAGGAGGTGAGGGCGACGCGGACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
||
| CDS CCA 72 bp | TATGAGCCGAGTCCCCGGTCAGTGCAAAAGACGTGCTaGGCAGCCGGAGCTCCTCAGTGGACGCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: YEPSPRSVQKTC*AAGAPQWTLLQ Trigger: CTGGAGGAGCGTCCACTGAGGAGCTCCGGCTGCCCAGCACGTCTTTTGCACTGACCGGGGACTCGGCTCATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | ACCCTTGGTGTGAGGACGGCTTCCTTTGGCACCATCTaGGAGAGCAGTAGCCCAAGAGTCCCCGCGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TLGVRTASFGTI*ESSSPRVPALQ Trigger: CTGGAGCGCGGGGACTCTTGGGCTACTGCTCTCGCAGATGGTGCCAAAGGAAGCCGTCCTCACACCAAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | CACAGGGTTCTGACACCACCGACCCAGAGTACTCTCTaGCAAGGGCACACTGAGCGCCTGGCTTGCGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HRVLTPPTQSTL*QGHTERLACVS Trigger: AGAAACGCAAGCCAGGCGCTCAGTGTGCCCTTGGCAGAGAGTACTCTGGGTCGGTGGTGTCAGAACCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | ACATTCGAAGTCCCAGTCCGCACAGACACAGGGTTCTaGCACCACCGACCCAGAGTACTCTCTGCCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TFEVPVRTDTGF*HHRPRVLSAKG Trigger: GCCCTTGGCAGAGAGTACTCTGGGTCGGTGGTGTCAGAACCCTGTGTCTGTGCGGACTGGGACTTCGAATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | TGCTCTCGCTGCTTGCAATGGTGGCAATGCTTCCTATaGCCCGCGTGTCCAGCTCTTTGTCCAGCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSRCLQWWQCFL*PACPALCPAAP Trigger: AGGAGCTGCTGGACAAAGAGCTGGACACGCGGGTCATAGGAAGCATTGCCACCATTGCAAGCAGCGAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | TCACCCTCCTCCATTAGAATGATGAAGGTTGCATTGTaGCCCTGTTCTGCCACCAGGCGCCCGTCAGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SPSSIRMMKVAL*PCSATRRPSVV Trigger: GACCACTGACGGGCGCCTGGTGGCAGAACAGGGCCACAATGCAACCTTCATCATTCTAATGGAGGAGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | AGGTCACCCTCCTCCATTAGAATGATGAAGGTTGCATaGTGGCCCTGTTCTGCCACCAGGCGCCCGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: RSPSSIRMMKVA*WPCSATRRPSV Trigger: CACTGACGGGCGCCTGGTGGCAGAACAGGGCCACAATGCAACCTTCATCATTCTAATGGAGGAGGGTGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 90 bp | AATGGAGCGGGCAAAAGGGCCGCTCCGAGTTGTCTCAGCACATTCTaGGATTCTGCAGGTGAGGTAGTGGGCATATCCATCTGCCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: NGAGKRAAPSCLSTF*DSAGEVVGISICRP Trigger: AGGACGGCAGATGGATATGCCCACTACCTCACCTGCAGAATCCAAGAATGTGCTGAGACAACTCGGAGCGGCCCTTTTGCCCGCTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | GGGGCTTTGTGCTATTTCCAAACCACCAGAAGTAGGTaGGGGTCCCTAGCTGACTGGGCCACACAACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GALCYFQTTRSR*GSLADWATQLH Trigger: GTGCAGTTGTGTGGCCCAGTCAGCTAGGGACCCTCACCTACTTCTGGTGGTTTGGAAATAGCACAAAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | GCTGTCACCTGGAAGATCCCCGCGCTCTTATACACATaGCTGATGCCATCCTCAATGGGGCTGAAGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: AVTWKIPALLYT*LMPSSMGLKLA Trigger: TGCCAACTTCAGCCCCATTGAGGATGGCATCAGGCATGTGTATAAGAGCGCGGGGATCTTCCAGGTGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | AGTGCAGTTGGGGATCTCCTTTGTGCTCTCGCTGCTTaGAATGGTGGCAATGCTTCCTATGACCCGCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SAVGDLLCALAA*NGGNASYDPRV Trigger: GACACGCGGGTCATAGGAAGCATTGCCACCATTGCAAGCAGCGAGAGCACAAAGGAGATCCCCAACTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | ATGGCCCTCATCAAAACTCACCCACAAATGCCTGACTaGCAGAGGTGTGTGCTTCATGGCCACCAGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: MALIKTHPQMPD*QRCVLHGHQST Trigger: GGTGCTCTGGTGGCCATGAAGCACACACCTCTGCCAGTCAGGCATTTGTGGGTGAGTTTTGATGAGGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | TATCCGTATAGGAGAGTTCGGAGCCAATATTACCCGTaGCAACCACAAGTCCAGGCGCTGTGTCCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: YPYRRVRSQYYP*QPQVQALCPCW Trigger: CCAGCAAGGACACAGCGCCTGGACTTGTGGTTGCCACGGGTAATATTGGCTCCGAACTCTCCTATACGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | GAGACCCGGGAACACAGCCACGAGGATCTGGTCTTCTaGGACACTGGTCACTTTAATCAGAGCTCGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ETREHSHEDLVF*DTGHFNQSSLD Trigger: ATCAAGCGAGCTCTGATTAAAGTGACCAGTGTCCCAGAAGACCAGATCCTCGTGGCTGTGTTCCCGGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | GAAGTAGGGAGACCCGGGAACACAGCCACGAGGATCTaGTCTTCTGGGACACTGGTCACTTTAATCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: EVGRPGNTATRI*SSGTLVTLIRA Trigger: AGCTCTGATTAAAGTGACCAGTGTCCCAGAAGACCAGATCCTCGTGGCTGTGTTCCCGGGTCTCCCTACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | CCACCAACGCCCCATCCACGAAAAGAGGCAGCAATGTaGAACCATACTTGTCCCAGGAATGGCCCTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: PPTPHPRKEAAM*NHTCPRNGPHQ Trigger: TTGATGAGGGCCATTCCTGGGACAAGTATGGTTTCACATTGCTGCCTCTTTTCGTGGATGGGGCGTTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | ACCACCGACCCAGAGTACTCTCTGCCAAGGGCACACTaGGCGCCTGGCTTGCGTTTCTTGAATATTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TTDPEYSLPRAH*APGLRFLNIFL Trigger: AAGGAAAATATTCAAGAAACGCAAGCCAGGCGCTCAGTGTGCCCTTGGCAGAGAGTACTCTGGGTCGGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | AGATGCAAGTGTAGGGAACAGAAGGGCAGTAAACAGTaGACTGGGCTTCCTCTCAGGTCCACATCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RCKCREQKGSKQ*TGLPLRSTSGA Trigger: AGCTCCAGATGTGGACCTGAGAGGAAGCCCAGTGCACTGTTTACTGCCCTTCTGTTCCCTACACTTGCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | TACCCGTGGCAACCACAAGTCCAGGCGCTGTGTCCTTaGTGGAGATTCTTCCAGAGGAATATGGGTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: YPWQPQVQALCP*WRFFQRNMGFQ Trigger: CTGAAAACCCATATTCCTCTGGAAGAATCTCCAGCAAGGACACAGCGCCTGGACTTGTGGTTGCCACGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | CCCAGAGTACTCTCTGCCAAGGGCACACTGAGCGCCTaGCTTGCGTTTCTTGAATATTTTCCTTTCCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: PRVLSAKGTLSA*LAFLEYFPFPH Trigger: ATGGGGGAAAGGAAAATATTCAAGAAACGCAAGCCAGGCGCTCAGTGTGCCCTTGGCAGAGAGTACTCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 90 bp | CACCGACCAGTAAAACCTGTTGGGCGTGATGCGTTCATGCATGAGTaGCCATCGTCTGCCGAAGTCCATGGAGCTATAAAGCTTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: HRPVKPVGRDAFMHE*PSSAEVHGAIKLLV Trigger: GACCAAAAGCTTTATAGCTCCATGGACTTCGGCAGACGATGGCAACTCATGCATGAACGCATCACGCCCAACAGGTTTTACTGGTCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | TCCGAGTTGTCTCAGCACATTCTTGGATTCTGCAGGTaGGGTAGTGGGCATATCCATCTGCCGTCCTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SELSQHILGFCR*GSGHIHLPSSL Trigger: AAGTGAGGACGGCAGATGGATATGCCCACTACCTCACCTGCAGAATCCAAGAATGTGCTGAGACAACTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | AGATCTGTCTCCATGTGTTGCCCCCATCAGAGGAGATaGACACACCGATATCCGTATAGGAGAGTTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSVSMCCPHQRR*THRYPYRRVRS Trigger: GCTCCGAACTCTCCTATACGGATATCGGTGTGTTCATCTCCTCTGATGGGGGCAACACATGGAGACAGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | ACATGGAGGCCCCGAGGAGCTTTTCCAGGACACAACTaGGTCTTAGCAGAGTACTTATCCCTTAGCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: TWRPRGAFPGHN*VLAEYLSLSPS Trigger: AGATGGGCTAAGGGATAAGTACTCTGCTAAGACTCAGTTGTGTCCTGGAAAAGCTCCTCGGGGCCTCCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | AGCAGCAACCTGGACAGTGATGGTGTTGGTTCCCTCTaGAAGGAATGTGAAAGAGATGCTGCTGTCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSNLDSDGVGSL*KECERDAAVQG Trigger: ACCTTGGACAGCAGCATCTCTTTCACATTCCTTGCAGAGGGAACCAACACCATCACTGTCCAGGTTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | ACTTTCACCAACTGCCATTCGGAGCGCAGGCTGAAGTaGCCAAAAACTGTCATGATGTGCGTCTCTACTCCT | + |
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Preference number: 6 (lower is better) Translates to: TFTNCHSERRLK*PKTVMMCVSTP Trigger: AGGAGTAGAGACGCACATCATGACAGTTTTTGGCCACTTCAGCCTGCGCTCCGAATGGCAGTTGGTGAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | TTACCCGTGGCAACCACAAGTCCAGGCGCTGTGTCCTaGCTGGAGATTCTTCCAGAGGAATATGGGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LPVATTSPGAVS*LEILPEEYGFS Trigger: TGAAAACCCATATTCCTCTGGAAGAATCTCCAGCAAGGACACAGCGCCTGGACTTGTGGTTGCCACGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 90 bp | TGCTTCATGGCCACCAGAGCACCACCCCAGTCTAGGAACCAGACATaGTATTCTTCATCAAAGATCTGTCTCCATGTGTTGCCCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: CFMATRAPPQSRNQT*YSSSKICLHVLPPS Trigger: TGATGGGGGCAACACATGGAGACAGATCTTTGATGAAGAATACAATGTCTGGTTCCTAGACTGGGGTGGTGCTCTGGTGGCCATGAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | CACAACTGCACTGATGTTGACGTCCTTATTCCGTATTaGGACGAATGGGACTCGAAGGTGAACGTGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HNCTDVDVLIPY*DEWDSKVNVFH Trigger: GTGGAACACGTTCACCTTCGAGTCCCATTCGTCGCAATACGGAATAAGGACGTCAACATCAGTGCAGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | GTAAAACCTGTTGGGCGTGATGCGTTCATGCATGAGTaGCCATCGTCTGCCGAAGTCCATGGAGCTATAAAG | + |
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Preference number: 6 (lower is better) Translates to: VKPVGRDAFMHE*PSSAEVHGAIK Trigger: CTTTATAGCTCCATGGACTTCGGCAGACGATGGCAACTCATGCATGAACGCATCACGCCCAACAGGTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | TCTTCTGGGACACTGGTCACTTTAATCAGAGCTCGCTaGATGACATTGCCAATGTCTTGCCTCCACTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSGTLVTLIRAR*MTLPMSCLHSG Trigger: CCCTGAGTGGAGGCAAGACATTGGCAATGTCATCAAGCGAGCTCTGATTAAAGTGACCAGTGTCCCAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS TCA 72 bp | GAGTGTGATTTTGGGTGCATTCTCACTTTGGCTCACTaGCCCGATCATCTCCTGTTCCTTGTCATGTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: ECDFGCILTLAH*PDHLLFLVMLD Trigger: GTCCAACATGACAAGGAACAGGAGATGATCGGGTCAGTGAGCCAAAGTGAGAATGCACCCAAAATCACACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | CTTCCAGAGGAATATGGGTTTTCAGAGAGCTGCAGATaGAAGTGTAGGGAACAGAAGGGCAGTAAACAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LPEEYGFSESCR*KCREQKGSKQC Trigger: GCACTGTTTACTGCCCTTCTGTTCCCTACACTTGCATCTGCAGCTCTCTGAAAACCCATATTCCTCTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | ACTGATGTTGACGTCCTTATTCCGTATTGCGACGAATaGGACTCGAAGGTGAACGTGTTCCACTGGACAAAC | + |
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Preference number: 6 (lower is better) Translates to: TDVDVLIPYCDE*DSKVNVFHWTN Trigger: GTTTGTCCAGTGGAACACGTTCACCTTCGAGTCCCATTCGTCGCAATACGGAATAAGGACGTCAACATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | GCCACCAGAGCACCACCCCAGTCTAGGAACCAGACATaGTATTCTTCATCAAAGATCTGTCTCCATGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ATRAPPQSRNQT*YSSSKICLHVL Trigger: CAACACATGGAGACAGATCTTTGATGAAGAATACAATGTCTGGTTCCTAGACTGGGGTGGTGCTCTGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CCA 72 bp | AATAGTGTCTCTACAATTTGTTCGAGATCCCCTTCGTaGCCTTTCCTCCTCTCTGTCAAGTTCTTAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: NSVSTICSRSPS*PFLLSVKFLGG Trigger: CCCACCTAAGAACTTGACAGAGAGGAGGAAAGGCCACGAAGGGGATCTCGAACAAATTGTAGAGACACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | GTACTGATAATGTGCATGTCCTTTGGCAAGGAGTACTaGGGCAGCTTTATCTGGGCAAAGGCTTCTCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: VLIMCMSFGKEY*GSFIWAKASLR Trigger: TCGAAGAGAAGCCTTTGCCCAGATAAAGCTGCCCAAGTACTCCTTGCCAAAGGACATGCACATTATCAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | TTAGCAGAGTACTTATCCCTTAGCCCATCTGTGCAGTaGTTGGATACAATCCTCCGGTACCCAGTGCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LAEYLSLSPSVQ*LDTILRYPVLL Trigger: TAACAGCACTGGGTACCGGAGGATTGTATCCAACAACTGCACAGATGGGCTAAGGGATAAGTACTCTGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS CAA 72 bp | ACACTGGTCACTTTAATCAGAGCTCGCTTGATGACATaGCCAATGTCTTGCCTCCACTCAGGGATATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TLVTLIRARLMT*PMSCLHSGISG Trigger: TCCTGATATCCCTGAGTGGAGGCAAGACATTGGCAATGTCATCAAGCGAGCTCTGATTAAAGTGACCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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| CDS GCA 72 bp | GAGATTCTTCCAGAGGAATATGGGTTTTCAGAGAGCTaGAGATGCAAGTGTAGGGAACAGAAGGGCAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: EILPEEYGFSES*RCKCREQKGSK Trigger: TTTACTGCCCTTCTGTTCCCTACACTTGCATCTGCAGCTCTCTGAAAACCCATATTCCTCTGGAAGAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078880.6 |
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