RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SORCS2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029093

Ensembl transcript IDs: ENSMUST00000037370.14, ENSMUST00000070720.8, ENSMUST00000135324.8

Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGTaGGTCATGAGTCGGCTGTCCCAGGATCCCATGGGCCAGCTGGGG +
Preference number: 1 (lower is better)
Translates to: VKGGDSVWHHRPVSR*VMSRLSQDPMGQLG
Trigger: CCCCAGCTGGCCCATGGGATCCTGGGACAGCCGACTCATGACCCACCTGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 90 bp CTGGTGAGTGTGCCAAACAGCAGCAGCAGCAGCAGCAGTGGGTGTTaGGACACCCGGGCCTCGCTCCAGGCCAGCCTGGGCTCTCTGGTA +
Preference number: 1 (lower is better)
Translates to: LVSVPNSSSSSSSGC*DTRASLQASLGSLV
Trigger: TACCAGAGAGCCCAGGCTGGCCTGGAGCGAGGCCCGGGTGTCTCAACACCCACTGCTGCTGCTGCTGCTGCTGTTTGGCACACTCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 90 bp CCTCACGGCAGGCAGGGAGGCAAAGGGTCTGCCCTGCTCCTTCCATaGACTCGGGGCTCCTGTCAGGTAGAAGGACCCACAGCACCTCCA +
Preference number: 1 (lower is better)
Translates to: PHGRQGGKGSALLLP*TRGSCQVEGPTAPP
Trigger: TGGAGGTGCTGTGGGTCCTTCTACCTGACAGGAGCCCCGAGTGCATGGAAGGAGCAGGGCAGACCCTTTGCCTCCCTGCCTGCCGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp GCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGCAGTTGTaGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGAGTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: AFPRVSEGVSFQLQL*SCALSGGSRRRVSW
Trigger: CCAGGACACTCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 90 bp CATGGGCCAGCTGGGGCTGACAGGGAGAAGTGTCTGTCCTCTGAGTaGGGACAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGT +
Preference number: 1 (lower is better)
Translates to: HGPAGADREKCLSSE*GQLEELAFPRVSEG
Trigger: ACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTGTCCCCACTCAGAGGACAGACACTTCTCCCTGTCAGCCCCAGCTGGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 90 bp AGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTaGAGTTGTGGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGAG +
Preference number: 1 (lower is better)
Translates to: RSWPFHGSQRVCHSS*SCGPVPSPEEAGGE
Trigger: CTCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 90 bp GCAGCATGTTCAGGTCTAAGGACTGTGATGCCTCAGAGTCAAGGGTaGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGTGGGTCAT +
Preference number: 1 (lower is better)
Translates to: AACSGLRTVMPQSQG*GLCVAPQARVQVGH
Trigger: ATGACCCACCTGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTCCTTAGACCTGAACATGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 90 bp GGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTaGTGTTGGGTTGGTCTGGCCCAGAGACTTCCTGACTCTGGGGTC +
Preference number: 1 (lower is better)
Translates to: GQVFTLQWREWLPGR*CWVGLAQRLPDSGV
Trigger: GACCCCAGAGTCAGGAAGTCTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 90 bp GGAGCTAGACTGGACTGGGTTTGCATGGACACAGGGAGCCCAGCCTaGAAATGTTCAAACCACCACTCCCCAGCAGGGCGGACTTTGTCA +
Preference number: 1 (lower is better)
Translates to: GARLDWVCMDTGSPA*KCSNHHSPAGRTLS
Trigger: TGACAAAGTCCGCCCTGCTGGGGAGTGGTGGTTTGAACATTTCCAGGCTGGGCTCCCTGTGTCCATGCAAACCCAGTCCAGTCTAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp CAGCAAAAGGTGGGGTCACAGTGGGTCCTCAGCCTGTACCTGGCTTaGGCAAAGCATCCTGACCTAGCACCAGGCTTCATCCTGGTTGTG +
Preference number: 1 (lower is better)
Translates to: QQKVGSQWVLSLYLA*AKHPDLAPGFILVV
Trigger: CACAACCAGGATGAAGCCTGGTGCTAGGTCAGGATGCTTTGCCCAAGCCAGGTACAGGCTGAGGACCCACTGTGACCCCACCTTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp GTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTaGGTTGGTCTGGCCCAGAGACTTCCTGACTCTGGGGTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: VFTLQWREWLPGRWC*VGLAQRLPDSGVLC
Trigger: GCAGAGGACCCCAGAGTCAGGAAGTCTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 90 bp GTCACAGTGGGTCCTCAGCCTGTACCTGGCTTGGGCAAAGCATCCTaGCCTAGCACCAGGCTTCATCCTGGTTGTGTAGAGTCAGACCTT +
Preference number: 1 (lower is better)
Translates to: VTVGPQPVPGLGKAS*PSTRLHPGCVESDL
Trigger: AAGGTCTGACTCTACACAACCAGGATGAAGCCTGGTGCTAGGTCAGGATGCTTTGCCCAAGCCAGGTACAGGCTGAGGACCCACTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR GCA 90 bp GGCCACAAGGCTCTGGATCCTCTAGTTCGTTTTCCCAGGAGATGCTaGCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCA +
Preference number: 1 (lower is better)
Translates to: GHKALDPLVRFPRRC*PPTPLLVGSYKGSS
Trigger: TGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCAGCATCTCCTGGGAAAACGAACTAGAGGATCCAGAGCCTTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 90 bp TGTTTTCCTGCCTCTGGCACGTGGGTAAGCGGAGCTAGACTGGACTaGGTTTGCATGGACACAGGGAGCCCAGCCTGGAAATGTTCAAAC +
Preference number: 1 (lower is better)
Translates to: CFPASGTWVSGARLD*VCMDTGSPAWKCSN
Trigger: GTTTGAACATTTCCAGGCTGGGCTCCCTGTGTCCATGCAAACCCAGTCCAGTCTAGCTCCGCTTACCCACGTGCCAGAGGCAGGAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp GAGTGGAGACAGGCTTGCACAAGCAGGCAGCGAGCAGACAGAGCCTaGAATATGGTAAAGATCTGCTGTTTTCCTGCCTCTGGCACGTGG +
Preference number: 1 (lower is better)
Translates to: EWRQACTSRQRADRA*NMVKICCFPASGTW
Trigger: CCACGTGCCAGAGGCAGGAAAACAGCAGATCTTTACCATATTCCAGGCTCTGTCTGCTCGCTGCCTGCTTGTGCAAGCCTGTCTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR TCA 90 bp GTTGCCCCTCTAGGCCCAGCTCTGGGCATTCTGAAAGAGGGGTTCTaGGAGTGGGATTCTGATGGATCGAAGATGGCTTCTATTGCCTGC +
Preference number: 1 (lower is better)
Translates to: VAPLGPALGILKEGF*EWDSDGSKMASIAC
Trigger: GCAGGCAATAGAAGCCATCTTCGATCCATCAGAATCCCACTCTCAGAACCCCTCTTTCAGAATGCCCAGAGCTGGGCCTAGAGGGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 90 bp ATGTTCAAACCACCACTCCCCAGCAGGGCGGACTTTGTCACAATTTaGAACTCAAAAGCCTCACGGCAGGCAGGGAGGCAAAGGGTCTGC +
Preference number: 1 (lower is better)
Translates to: MFKPPLPSRADFVTI*NSKASRQAGRQRVC
Trigger: GCAGACCCTTTGCCTCCCTGCCTGCCGTGAGGCTTTTGAGTTTCAAATTGTGACAAAGTCCGCCCTGCTGGGGAGTGGTGGTTTGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR GCA 90 bp ACACCTGGAGCCCGACTAGGAGGAAATGAAGACCCAGCTACCTCCTaGAGAGGACATAGGACTGAGTTGGGATTTCTTCTCCAGGGAGTG +
Preference number: 1 (lower is better)
Translates to: TPGARLGGNEDPATS*RGHRTELGFLLQGV
Trigger: CACTCCCTGGAGAAGAAATCCCAACTCAGTCCTATGTCCTCTGCAGGAGGTAGCTGGGTCTTCATTTCCTCCTAGTCGGGCTCCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp CCTTGGGCCTTATGGAGACTGTCGTGTGTGAGCATCTCCTCTGTGTaGTACTGGGTGGTACTTCCATGCTGTGGGGATACAGATGGGGAA +
Preference number: 1 (lower is better)
Translates to: PWALWRLSCVSISSV*YWVVLPCCGDTDGE
Trigger: TTCCCCATCTGTATCCCCACAGCATGGAAGTACCACCCAGTACCACACAGAGGAGATGCTCACACACGACAGTCTCCATAAGGCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 90 bp GCCTGGAATATGGTAAAGATCTGCTGTTTTCCTGCCTCTGGCACGTaGGTAAGCGGAGCTAGACTGGACTGGGTTTGCATGGACACAGGG +
Preference number: 1 (lower is better)
Translates to: AWNMVKICCFPASGT*VSGARLDWVCMDTG
Trigger: CCCTGTGTCCATGCAAACCCAGTCCAGTCTAGCTCCGCTTACCCACGTGCCAGAGGCAGGAAAACAGCAGATCTTTACCATATTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp CTGAGTTGGGATTTCTTCTCCAGGGAGTGTTCTCCGTGGGGTTTCTaGGAGAAAGCCAGCAGAGGCCAGAATGACAGAACTAAGCTGGGC +
Preference number: 1 (lower is better)
Translates to: LSWDFFSRECSPWGF*EKASRGQNDRTKLG
Trigger: GCCCAGCTTAGTTCTGTCATTCTGGCCTCTGCTGGCTTTCTCCCAGAAACCCCACGGAGAACACTCCCTGGAGAAGAAATCCCAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR TCA 90 bp TACCACAGCGACTTAGAGGAGAAAATCACAGGCCAGAGTTATGTCTaGGGTGGCAGAGCACCATGCCCGGGGCCACACTCTGATTATACC +
Preference number: 1 (lower is better)
Translates to: YHSDLEEKITGQSYV*GGRAPCPGPHSDYT
Trigger: GGTATAATCAGAGTGTGGCCCCGGGCATGGTGCTCTGCCACCTCAGACATAACTCTGGCCTGTGATTTTCTCCTCTAAGTCGCTGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp GAAATGAAGACCCAGCTACCTCCTGCAGAGGACATAGGACTGAGTTaGGATTTCTTCTCCAGGGAGTGTTCTCCGTGGGGTTTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: EMKTQLPPAEDIGLS*DFFSRECSPWGFWE
Trigger: CTCCCAGAAACCCCACGGAGAACACTCCCTGGAGAAGAAATCCCAACTCAGTCCTATGTCCTCTGCAGGAGGTAGCTGGGTCTTCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR TCA 90 bp GGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGAATaGTGCCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTGACTTGG +
Preference number: 1 (lower is better)
Translates to: GREGNTDFSFKAKGE*CQLTVSTCAGSLTW
Trigger: CCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGGCATCATTCACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 90 bp AGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGAACTaGTGGGTGCTGGTGAGTGTGCCAAACAGCAGCAGCAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: RPLLLYGSHFFLREN*WVLVSVPNSSSSSS
Trigger: GCTGCTGCTGCTGCTGCTGTTTGGCACACTCACCAGCACCCATCAGTTCTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 90 bp GTTTCTGGGAGAAAGCCAGCAGAGGCCAGAATGACAGAACTAAGCTaGGCGTTGTGCAGTGTCCAGTTCATGCTCCTCATTTATACATGG +
Preference number: 1 (lower is better)
Translates to: VSGRKPAEARMTELS*ALCSVQFMLLIYTW
Trigger: CCATGTATAAATGAGGAGCATGAACTGGACACTGCACAACGCCCAGCTTAGTTCTGTCATTCTGGCCTCTGCTGGCTTTCTCCCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 90 bp TTCCAGCAAAGCTATCCATTATCTAACAACAAGGAGAGGCACACATaGGTGTTCTGTGGGAAACGGCCTTACCGTCCCAGGTCACAGTCA +
Preference number: 1 (lower is better)
Translates to: FQQSYPLSNNKERHT*VFCGKRPYRPRSQS
Trigger: TGACTGTGACCTGGGACGGTAAGGCCGTTTCCCACAGAACACCCATGTGTGCCTCTCCTTGTTGTTAGATAATGGATAGCTTTGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CAA 90 bp GCTGGTGAGTGTGCCAAACAGCAGCAGCAGCAGCAGCAGTGGGTGTaGAGACACCCGGGCCTCGCTCCAGGCCAGCCTGGGCTCTCTGGT +
Preference number: 2 (lower is better)
Translates to: AGECAKQQQQQQQWV*RHPGLAPGQPGLSG
Trigger: ACCAGAGAGCCCAGGCTGGCCTGGAGCGAGGCCCGGGTGTCTCAACACCCACTGCTGCTGCTGCTGCTGCTGTTTGGCACACTCACCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR GCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGCAGTTGTGGTCCTGTaGCCTCTCCGGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: DASESRVGTLCGTTGPCPAVVVL*PLRRKQ
Trigger: CTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCAGGAGAAGCCAGGCCTaGGCTGCAGTGGCAAGATGG +
Preference number: 2 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSRRSQA*AAVARW
Trigger: CCATCTTGCCACTGCAGCCCAGGCCTGGCTTCTCCT...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCGCTACAAGTCTGGAGTaGGGGTGGTGGTGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSATSLE*GWWWLQ
Trigger: CTGCAGCCACCACCACCCCCACTCCAGACTTGTAGC...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 90 bp TTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGCAGTaGTGGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGAGTGTCC +
Preference number: 2 (lower is better)
Translates to: LAFPRVSEGVSFQLQ*WSCALSGGSRRRVS
Trigger: GGACACTCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp CCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTGACTTGGCCGTAGGAGCAGGCGAGAGAGTGGCTTCCTaGAAGGTGGTGTTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: PAHSVNLCWVPDLAVGAGERVAS*KVVLGW
Trigger: CCAACCCAACACCACCTTCCAGGAAGCCACTCTCTC...GCCTGCTCCTACGGCCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp TCTGTGGGAAACGGCCTTACCGTCCCAGGTCACAGTCACCTGGGGGAAGGGGGCACAGGGAGCCCAGCCTaGAAATGTTCAAACCACCAC +
Preference number: 2 (lower is better)
Translates to: SVGNGLTVPGHSHLGEGGTGSPA*KCSNHH
Trigger: GTGGTGGTTTGAACATTTCCAGGCTGGGCTCCCTGT...GCCCCCTTCCCCCAGGTGACTGTGACCTGGGACGGTAAGGCCGTTTCCCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR TCA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTCTGTGGGGCCAGGGCTaGGCAGGCTACAAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVLWGQG*AGYKSG
Trigger: TCCAGACTTGTAGCCTGCTCAGCCCTGGCCCCACAG...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp TCTGTGGGAAACGGCCTTACCGTCCCAGGTCACAGTCACCTGGGGGAAGGGGGCCACCAGGCTTCATCCTaGTTGTGTAGAGTCAGACCT +
Preference number: 2 (lower is better)
Translates to: SVGNGLTVPGHSHLGEGGHQASS*LCRVRP
Trigger: AGGTCTGACTCTACACAACCAGGATGAAGCCTGGTG...GCCCCCTTCCCCCAGGTGACTGTGACCTGGGACGGTAAGGCCGTTTCCCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CCA 90 bp AGAAAATCACAGGCCAGAGTTATGTCTGAGGTGGCAGAGCACCATGCCCGGGGCTCTCCGTGGGGTTTCTaGGAGAAAGCCAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: RKSQARVMSEVAEHHARGSPWGF*EKASRG
Trigger: GCCTCTGCTGGCTTTCTCCCAGAAACCCCACGGAGA...GCCCCGGGCATGGTGCTCTGCCACCTCAGACATAACTCTGGCCTGTGATTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR GCA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGATTTCCCAGGAGATGCTaGCCTCCCACCCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGFPRRC*PPTPLL
Trigger: CAGAAGAGGGGTGGGAGGGCAGCATCTCCTGGGAAA...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR GCA 90 bp CACCATGCCCGGGGCCACACTCTGATTATACCGCAGGCGAGACAAAAATCAAAGGCAAAGGGTCTGCCCTaGTCCTTCCATGCACTCGGG +
Preference number: 2 (lower is better)
Translates to: HHARGHTLIIPQARQKSKAKGLP*SFHALG
Trigger: CCCGAGTGCATGGAAGGAGCAGGGCAGACCCTTTGC...CTTTGATTTTTGTCTCGCCTGCGGTATAATCAGAGTGTGGCCCCGGGCATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR GCA 90 bp AGAAAATCACAGGCCAGAGTTATGTCTGAGGTGGCAGAGCACCATGCCCGGGGCGACCCAGCTACCTCCTaGAGAGGACATAGGACTGAG +
Preference number: 2 (lower is better)
Translates to: RKSQARVMSEVAEHHARGDPATS*RGHRTE
Trigger: CTCAGTCCTATGTCCTCTGCAGGAGGTAGCTGGGTC...GCCCCGGGCATGGTGCTCTGCCACCTCAGACATAACTCTGGCCTGTGATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CCA 90 bp TGGGGTTTCTGGGAGAAAGCCAGCAGAGGCCAGAATGACAGAACTAAGCTGGGCTGGACTGGGTTTGCATaGACACAGGGAGCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: WGFWEKASRGQNDRTKLGWTGFA*TQGAQP
Trigger: AGGCTGGGCTCCCTGTGTCCATGCAAACCCAGTCCA...GCCCAGCTTAGTTCTGTCATTCTGGCCTCTGCTGGCTTTCTCCCAGAAACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR TCA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGGGCCCAGAGACTTCCTaGCTCTGGGGTCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVGPETS*LWGPLQ
Trigger: CTGCAGAGGACCCCAGAGTCAGGAAGTCTCTGGGCC...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR GCA 90 bp TCATCCTGGTTGTGTAGAGTCAGACCTTTGCCTGGATTCATGCGTAGACACCTGGCCCTGCTCCTTCCATaGACTCGGGGCTCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: SSWLCRVRPLPGFMRRHLALLLP*TRGSCQ
Trigger: CTGACAGGAGCCCCGAGTGCATGGAAGGAGCAGGGC...CAGGTGTCTACGCATGAATCCAGGCAAAGGTCTGACTCTACACAACCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CCA 90 bp CACCATGCCCGGGGCCACACTCTGATTATACCGCAGGCGAGACAAAAATCAAAGAAGGTGGGGTCACAGTaGGTCCTCAGCCTGTACCTG +
Preference number: 2 (lower is better)
Translates to: HHARGHTLIIPQARQKSKKVGSQ*VLSLYL
Trigger: CAGGTACAGGCTGAGGACCCACTGTGACCCCACCTT...CTTTGATTTTTGTCTCGCCTGCGGTATAATCAGAGTGTGGCCCCGGGCATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR GCA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGATGGGTGGTACTTCCATaGTGTGGGGATACAGATGGG +
Preference number: 2 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGWVVLP*CGDTDG
Trigger: CCCATCTGTATCCCCACAGCATGGAAGTACCACCCA...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 90 bp AATGTTCAAACCACCACTCCCCAGCAGGGCGGACTTTGTCACAATTaGAAACTCAAAAGCCTCACGGCAGGCAGGGAGGCAAAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: NVQTTTPQQGGLCHN*KLKSLTAGREAKGL
Trigger: CAGACCCTTTGCCTCCCTGCCTGCCGTGAGGCTTTTGAGTTTCAAATTGTGACAAAGTCCGCCCTGCTGGGGAGTGGTGGTTTGAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR GCA 90 bp GTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTGTGTGTCATTCCAGCTaGAGTTGTGGTCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: VFTLQWREWLPGRWCWVGVCHSS*SCGPVP
Trigger: GGGCACAGGACCACAACTGCAGCTGGAATGACACAC...ACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR TCA 90 bp CCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTGACTTGGCCGTAGGAGCAGGCTTCTATTGCCTGCCTTaGAAACAGAAAGCTAAAAGA +
Preference number: 2 (lower is better)
Translates to: PAHSVNLCWVPDLAVGAGFYCLP*KQKAKR
Trigger: TCTTTTAGCTTTCTGTTTTCAAGGCAGGCAATAGAA...GCCTGCTCCTACGGCCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp GTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTTGTCTGTCCTCTGAGTaGGGACAGCTAGAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: VFTLQWREWLPGRWCWVGCLSSE*GQLEEL
Trigger: CAACTCCTCTAGCTGTCCCCACTCAGAGGACAGACA...ACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp GGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGAATGATAGCAGGCTACAAGTCTaGAGTGGGGGTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: GGEGKGILTSVSRQKVNDSRLQV*SGGGGG
Trigger: GCCACCACCACCCCCACTCCAGACTTGTAGCCTGCT...ATCATTCACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGCTGCAGTGGAGAGAGTaGCTTCCTGGAAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVLQWRE*LPGRWC
Trigger: ACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAG...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp ATATTGCATGCCATGGGCTCCAGATTCTCAGGCCCCATTAGACTCTCGAAGGTTGGAGCTAGACTGGACTaGGTTTGCATGGACACAGGG +
Preference number: 2 (lower is better)
Translates to: ILHAMGSRFSGPIRLSKVGARLD*VCMDTG
Trigger: CCCTGTGTCCATGCAAACCCAGTCCAGTCTAGCTCC...AACCTTCGAGAGTCTAATGGGGCCTGAGAATCTGGAGCCCATGGCATGCAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CCA 90 bp CGGGGCCACACTCTGATTATACCGCAGGCGAGACAAAAATCAAAGCAAGCTCGTAAGGAGAGGCACACATaGGTGTTCTGTGGGAAACGG +
Preference number: 2 (lower is better)
Translates to: RGHTLIIPQARQKSKQARKERHT*VFCGKR
Trigger: CCGTTTCCCACAGAACACCCATGTGTGCCTCTCCTT...ACGAGCTTGCTTTGATTTTTGTCTCGCCTGCGGTATAATCAGAGTGTGGCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR TCA 90 bp CTTTTGTCTCTTTCATACATATTGCATGCCATGGGCTCCAGATTCTCAGGCCCCTATACATGGGGGAAATaGGGCCCAGAGTGGAGACAG +
Preference number: 2 (lower is better)
Translates to: LLSLSYILHAMGSRFSGPYTWGK*GPEWRQ
Trigger: CTGTCTCCACTCTGGGCCTCATTTCCCCCATGTATA...GGGGCCTGAGAATCTGGAGCCCATGGCATGCAATATGTATGAAAGAGACAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR GCA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGTGTGTTCTACTAATGTaGCTTTCTGGGGCCTGTAGT +
Preference number: 2 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRCVLLM*LSGACS
Trigger: ACTACAGGCCCCAGAAAGGCACATTAGTAGAACACA...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR CCA 90 bp CGGGGCCACACTCTGATTATACCGCAGGCGAGACAAAAATCAAAGCAAGCTCGTCGAGCAGACAGAGCCTaGAATATGGTAAAGATCTGC +
Preference number: 2 (lower is better)
Translates to: RGHTLIIPQARQKSKQARRADRA*NMVKIC
Trigger: GCAGATCTTTACCATATTCCAGGCTCTGTCTGCTCG...ACGAGCTTGCTTTGATTTTTGTCTCGCCTGCGGTATAATCAGAGTGTGGCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR GCA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGAATGGCTTCTATTGCCTaGCTTGAAAACAGAAAGCTA +
Preference number: 2 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGMASIA*LENRKL
Trigger: TAGCTTTCTGTTTTCAAGGCAGGCAATAGAAGCCAT...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR GCA 90 bp GGCCAGAATGACAGAACTAAGCTGGGCGTTGTGCAGTGTCCAGTTCATGCTCCTAATATGGTAAAGATCTaGTGTTTTCCTGCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: GQNDRTKLGVVQCPVHAPNMVKI*CFPASG
Trigger: GCCAGAGGCAGGAAAACAGCAGATCTTTACCATATT...AGGAGCATGAACTGGACACTGCACAACGCCCAGCTTAGTTCTGTCATTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CCA 90 bp GGAGTCCCACTTTCCAGCAAAGCTATCCATTATCTAACAACAAGGAGAGGCACAAGCCTGTACCTGGCTTaGGCAAAGCATCCTGACCTA +
Preference number: 2 (lower is better)
Translates to: GVPLSSKAIHYLTTRRGTSLYLA*AKHPDL
Trigger: TAGGTCAGGATGCTTTGCCCAAGCCAGGTACAGGCT...TGTGCCTCTCCTTGTTGTTAGATAATGGATAGCTTTGCTGGAAAGTGGGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CCA 90 bp AAAGCTATCCATTATCTAACAACAAGGAGAGGCACACATGGGTGTTCTGTGGGATCCTCAGCCTGTACCTaGCTTGGGCAAAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: KAIHYLTTRRGTHGCSVGSSACT*LGQSIL
Trigger: CAGGATGCTTTGCCCAAGCCAGGTACAGGCTGAGGA...TCCCACAGAACACCCATGTGTGCCTCTCCTTGTTGTTAGATAATGGATAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGCACCCCTCTTCTGGTTaGTTCTTACAAGGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: RVCLRPLLLYGSHFFLREHPSSG*FLQGFL
Trigger: GAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTG...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR GCA 90 bp CTTTTGTCTCTTTCATACATATTGCATGCCATGGGCTCCAGATTCTCAGGCCCCGCAGTGTCCAGTTCATaGTCCTCATTTATACATGGG +
Preference number: 2 (lower is better)
Translates to: LLSLSYILHAMGSRFSGPAVSSS*SSFIHG
Trigger: CCCATGTATAAATGAGGAGCATGAACTGGACACTGC...GGGGCCTGAGAATCTGGAGCCCATGGCATGCAATATGTATGAAAGAGACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR TCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGTTTCAAGGCAAAAGGTaGATGATGCCAGCTCACAGT +
Preference number: 2 (lower is better)
Translates to: RVCLRPLLLYGSHFFLREFQGKR*MMPAHS
Trigger: ACTGTGAGCTGGCATCATTCACCTTTTGCCTTGAAA...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR-3UTR TCA 90 bp AGAATGACAGAACTAAGCTGGGCGTTGTGCAGTGTCCAGTTCATGCTCCTCATTGACTTTGTCACAATTTaGAACTCAAAAGCCTCACGG +
Preference number: 2 (lower is better)
Translates to: RMTELSWALCSVQFMLLIDFVTI*NSKASR
Trigger: CCGTGAGGCTTTTGAGTTTCAAATTGTGACAAAGTC...AATGAGGAGCATGAACTGGACACTGCACAACGCCCAGCTTAGTTCTGTCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CAA 90 bp CCTGCATGGCCATCTGCAGTGATGGAGATGAGAACAGGGAGGATCTaGGGTCTATACGCTCCAAATGTTCAAATAGAAATAGTAACAAAA +
Preference number: 2 (lower is better)
Translates to: PAWPSAVMEMRTGRI*GLYAPNVQIEIVTK
Trigger: TTTTGTTACTATTTCTATTTGAACATTTGGAGCGTATAGACCCAAGATCCTCCCTGTTCTCATCTCCATCACTGCAGATGGCCATGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 72 bp CTGTGTGGCACCACAGGCCCGTGTCCAGGTGGGTCATaGGTCGGCTGTCCCAGGATCCCATGGGCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LCGTTGPCPGGS*VGCPRIPWASW
Trigger: CCAGCTGGCCCATGGGATCCTGGGACAGCCGACTCATGACCCACCTGGACACGGGCCTGTGGTGCCACACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp GGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGTaGGTCATGAGTCGGCTGTCCCAGGATCCCATGGGC +
Preference number: 3 (lower is better)
Translates to: GDSVWHHRPVSR*VMSRLSQDPMG
Trigger: GCCCATGGGATCCTGGGACAGCCGACTCATGACCCACCTGGACACGGGCCTGTGGTGCCACACAGAGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp GCCAGGGCTGAGCAGGCTACAAGTCTGGAGTGGGGGTaGTGGTGGCTGCAGGCTCACCCCAGAAATAGGCTG +
Preference number: 3 (lower is better)
Translates to: ARAEQATSLEWG*WWLQAHPRNRL
Trigger: CAGCCTATTTCTGGGGTGAGCCTGCAGCCACCACCACCCCCACTCCAGACTTGTAGCCTGCTCAGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 72 bp AGGCAGGGAGGCAAAGGGTCTGCCCTGCTCCTTCCATaGACTCGGGGCTCCTGTCAGGTAGAAGGACCCACA +
Preference number: 3 (lower is better)
Translates to: RQGGKGSALLLP*TRGSCQVEGPT
Trigger: TGTGGGTCCTTCTACCTGACAGGAGCCCCGAGTGCATGGAAGGAGCAGGGCAGACCCTTTGCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CAA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGACAGCTAGAGGAGTaGGCCTTTCCACGGGTCTCA +
Preference number: 3 (lower is better)
Translates to: DASESRVGTLCGTTGPCPGQLEE*AFPRVS
Trigger: TGAGACCCGTGGAAAGGCCAACTCCTCTAGCTGTCC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 72 bp GATGCCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTaGCTTGGCCGTAGGAGCAGGCAGCAGGCGACTCTA +
Preference number: 3 (lower is better)
Translates to: DASSQCQPVLGP*LGRRSRQQATL
Trigger: TAGAGTCGCCTGCTGCCTGCTCCTACGGCCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp CGGGTCTCAGAGGGTGTGTCATTCCAGCTGCAGTTGTaGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: RVSEGVSFQLQL*SCALSGGSRRR
Trigger: TCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATGACACACCCTCTGAGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp CTGGACTGGGTTTGCATGGACACAGGGAGCCCAGCCTaGAAATGTTCAAACCACCACTCCCCAGCAGGGCGG +
Preference number: 3 (lower is better)
Translates to: LDWVCMDTGSPA*KCSNHHSPAGR
Trigger: CCGCCCTGCTGGGGAGTGGTGGTTTGAACATTTCCAGGCTGGGCTCCCTGTGTCCATGCAAACCCAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp GCCTCTGGCACGTGGGTAAGCGGAGCTAGACTGGACTaGGTTTGCATGGACACAGGGAGCCCAGCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: ASGTWVSGARLD*VCMDTGSPAWK
Trigger: TTTCCAGGCTGGGCTCCCTGTGTCCATGCAAACCCAGTCCAGTCTAGCTCCGCTTACCCACGTGCCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp GAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTaGCCCAGAGACTTCCTGACTCTGGGGTCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: ESGFLEGGVGLV*PRDFLTLGSSA
Trigger: TGCAGAGGACCCCAGAGTCAGGAAGTCTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp CTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTaGGTTGGTCTGGCCCAGAGACTTCCTGACTCTGGG +
Preference number: 3 (lower is better)
Translates to: LQWREWLPGRWC*VGLAQRLPDSG
Trigger: CCCAGAGTCAGGAAGTCTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp GTGGGGTCACAGTGGGTCCTCAGCCTGTACCTGGCTTaGGCAAAGCATCCTGACCTAGCACCAGGCTTCATC +
Preference number: 3 (lower is better)
Translates to: VGSQWVLSLYLA*AKHPDLAPGFI
Trigger: GATGAAGCCTGGTGCTAGGTCAGGATGCTTTGCCCAAGCCAGGTACAGGCTGAGGACCCACTGTGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp CTACCCGGGCAGGTATTTACACTGCAGTGGAGAGAGTaGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: LPGQVFTLQWRE*LPGRWCWVGLA
Trigger: GGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 72 bp CCACCACTCCCCAGCAGGGCGGACTTTGTCACAATTTaGAACTCAAAAGCCTCACGGCAGGCAGGGAGGCAA +
Preference number: 3 (lower is better)
Translates to: PPLPSRADFVTI*NSKASRQAGRQ
Trigger: TTGCCTCCCTGCCTGCCGTGAGGCTTTTGAGTTTCAAATTGTGACAAAGTCCGCCCTGCTGGGGAGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp CAGTTTTCCGTGCAGCTTCCTAGACCCAGCAAAAGGTaGGGTCACAGTGGGTCCTCAGCCTGTACCTGGCTT +
Preference number: 3 (lower is better)
Translates to: QFSVQLPRPSKR*GHSGSSACTWL
Trigger: AAGCCAGGTACAGGCTGAGGACCCACTGTGACCCCACCTTTTGCTGGGTCTAGGAAGCTGCACGGAAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR TCA 72 bp CTGAGGTGGCAGAGCACCATGCCCGGGGCCACACTCTaGTTATACCGCAGGCGAGACAAAAATCAAAGCAAG +
Preference number: 3 (lower is better)
Translates to: LRWQSTMPGATL*LYRRRDKNQSK
Trigger: CTTGCTTTGATTTTTGTCTCGCCTGCGGTATAATCAGAGTGTGGCCCCGGGCATGGTGCTCTGCCACCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR TCA 72 bp GACTTAGAGGAGAAAATCACAGGCCAGAGTTATGTCTaGGGTGGCAGAGCACCATGCCCGGGGCCACACTCT +
Preference number: 3 (lower is better)
Translates to: DLEEKITGQSYV*GGRAPCPGPHS
Trigger: AGAGTGTGGCCCCGGGCATGGTGCTCTGCCACCTCAGACATAACTCTGGCCTGTGATTTTCTCCTCTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp TTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTaGTGTTGGGTTGGTCTGGCCCAGAGACTTCCTGAC +
Preference number: 3 (lower is better)
Translates to: FTLQWREWLPGR*CWVGLAQRLPD
Trigger: GTCAGGAAGTCTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp GCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTaGAAGGTGGTGTTGGGTTGGTCTGGCCCAGAGACT +
Preference number: 3 (lower is better)
Translates to: AGIYTAVERVAS*KVVLGWSGPET
Trigger: AGTCTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp ACCCAGCTACCTCCTGCAGAGGACATAGGACTGAGTTaGGATTTCTTCTCCAGGGAGTGTTCTCCGTGGGGT +
Preference number: 3 (lower is better)
Translates to: TQLPPAEDIGLS*DFFSRECSPWG
Trigger: ACCCCACGGAGAACACTCCCTGGAGAAGAAATCCCAACTCAGTCCTATGTCCTCTGCAGGAGGTAGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR TCA 72 bp CACATTTCTTCCTTAGGGAGAACTGATGGGTGCTGGTaGGTGTGCCAAACAGCAGCAGCAGCAGCAGCAGTG +
Preference number: 3 (lower is better)
Translates to: HISSLGRTDGCW*VCQTAAAAAAV
Trigger: CACTGCTGCTGCTGCTGCTGCTGTTTGGCACACTCACCAGCACCCATCAGTTCTCCCTAAGGAAGAAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 72 bp GCTCTGGATCCTCTAGTTCGTTTTCCCAGGAGATGCTaGCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAG +
Preference number: 3 (lower is better)
Translates to: ALDPLVRFPRRC*PPTPLLVGSYK
Trigger: CTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCAGCATCTCCTGGGAAAACGAACTAGAGGATCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 72 bp AAGGCTCTGGATCCTCTAGTTCGTTTTCCCAGGAGATaGTGCCCTCCCACCCCTCTTCTGGTTGGTTCTTAC +
Preference number: 3 (lower is better)
Translates to: KALDPLVRFPRR*CPPTPLLVGSY
Trigger: GTAAGAACCAACCAGAAGAGGGGTGGGAGGGCAGCATCTCCTGGGAAAACGAACTAGAGGATCCAGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 72 bp CAGCGAGCAGACAGAGCCTGGAATATGGTAAAGATCTaGTGTTTTCCTGCCTCTGGCACGTGGGTAAGCGGA +
Preference number: 3 (lower is better)
Translates to: QRADRAWNMVKI*CFPASGTWVSG
Trigger: TCCGCTTACCCACGTGCCAGAGGCAGGAAAACAGCAGATCTTTACCATATTCCAGGCTCTGTCTGCTCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR GCA 72 bp ACCAGGCTTCATCCTGGTTGTGTAGAGTCAGACCTTTaGCTGGATTCATGCGTAGACACCTGGAGCCCGACT +
Preference number: 3 (lower is better)
Translates to: TRLHPGCVESDL*LDSCVDTWSPT
Trigger: AGTCGGGCTCCAGGTGTCTACGCATGAATCCAGGCAAAGGTCTGACTCTACACAACCAGGATGAAGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp CTGAGTTGGGATTTCTTCTCCAGGGAGTGTTCTCCGTaGGGTTTCTGGGAGAAAGCCAGCAGAGGCCAGAAT +
Preference number: 3 (lower is better)
Translates to: LSWDFFSRECSP*GFWEKASRGQN
Trigger: ATTCTGGCCTCTGCTGGCTTTCTCCCAGAAACCCCACGGAGAACACTCCCTGGAGAAGAAATCCCAACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR TCA 72 bp CTAGGCCCAGCTCTGGGCATTCTGAAAGAGGGGTTCTaGGAGTGGGATTCTGATGGATCGAAGATGGCTTCT +
Preference number: 3 (lower is better)
Translates to: LGPALGILKEGF*EWDSDGSKMAS
Trigger: AGAAGCCATCTTCGATCCATCAGAATCCCACTCTCAGAACCCCTCTTTCAGAATGCCCAGAGCTGGGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR TCA 72 bp GTCCAGTTCATGCTCCTCATTTATACATGGGGGAAATaGGGCCCAGAGTGGAGACAGGCTTGCACAAGCAGG +
Preference number: 3 (lower is better)
Translates to: VQFMLLIYTWGK*GPEWRQACTSR
Trigger: CCTGCTTGTGCAAGCCTGTCTCCACTCTGGGCCTCATTTCCCCCATGTATAAATGAGGAGCATGAACTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR GCA 72 bp AACCCTGTAGCCCTGAGGGAAAATCAGAGAGATAGTTaGCCCTCTAGGCCCAGCTCTGGGCATTCTGAAAGA +
Preference number: 3 (lower is better)
Translates to: NPVALRENQRDS*PSRPSSGHSER
Trigger: TCTTTCAGAATGCCCAGAGCTGGGCCTAGAGGGGCAACTATCTCTCTGATTTTCCCTCAGGGCTACAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 72 bp GCCCGACTAGGAGGAAATGAAGACCCAGCTACCTCCTaGAGAGGACATAGGACTGAGTTGGGATTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: ARLGGNEDPATS*RGHRTELGFLL
Trigger: GAGAAGAAATCCCAACTCAGTCCTATGTCCTCTGCAGGAGGTAGCTGGGTCTTCATTTCCTCCTAGTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp CCTGAGCCCCAGAGAGTGGCAGAAAGTGAGAGATATTaGGGTACAGTTGAGACACTCCCACAGACCAGCTTT +
Preference number: 3 (lower is better)
Translates to: PEPQRVAESERY*GTVETLPQTSF
Trigger: AAAGCTGGTCTGTGGGAGTGTCTCAACTGTACCCCAATATCTCTCACTTTCTGCCACTCTCTGGGGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp ATGGTAAAGATCTGCTGTTTTCCTGCCTCTGGCACGTaGGTAAGCGGAGCTAGACTGGACTGGGTTTGCATG +
Preference number: 3 (lower is better)
Translates to: MVKICCFPASGT*VSGARLDWVCM
Trigger: CATGCAAACCCAGTCCAGTCTAGCTCCGCTTACCCACGTGCCAGAGGCAGGAAAACAGCAGATCTTTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CCA 72 bp GATTTCTTCTCCAGGGAGTGTTCTCCGTGGGGTTTCTaGGAGAAAGCCAGCAGAGGCCAGAATGACAGAACT +
Preference number: 3 (lower is better)
Translates to: DFFSRECSPWGF*EKASRGQNDRT
Trigger: AGTTCTGTCATTCTGGCCTCTGCTGGCTTTCTCCCAGAAACCCCACGGAGAACACTCCCTGGAGAAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CAA 90 bp GGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGAATGATGAAGGTGGTGTTGGGTaGGTCTGGCCCAGAGACTTC +
Preference number: 3 (lower is better)
Translates to: GGEGKGILTSVSRQKVNDEGGVG*VWPRDF
Trigger: GAAGTCTCTGGGCCAGACCAACCCAACACCACCTTC...ATCATTCACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CCA 72 bp AGAAAGCCAGCAGAGGCCAGAATGACAGAACTAAGCTaGGCGTTGTGCAGTGTCCAGTTCATGCTCCTCATT +
Preference number: 3 (lower is better)
Translates to: RKPAEARMTELS*ALCSVQFMLLI
Trigger: AATGAGGAGCATGAACTGGACACTGCACAACGCCCAGCTTAGTTCTGTCATTCTGGCCTCTGCTGGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CAA 90 bp TCATCCTGGTTGTGTAGAGTCAGACCTTTGCCTGGATTCATGCGTAGACACCTGGGACATAGGACTGAGTaGGGATTTCTTCTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: SSWLCRVRPLPGFMRRHLGHRTE*GFLLQG
Trigger: TCCCTGGAGAAGAAATCCCAACTCAGTCCTATGTCC...CAGGTGTCTACGCATGAATCCAGGCAAAGGTCTGACTCTACACAACCAGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR-3UTR CAA 90 bp CGGGGCCACACTCTGATTATACCGCAGGCGAGACAAAAATCAAAGCAAGCTCGTGGACTTTGTCACAATTaGAAACTCAAAAGCCTCACG +
Preference number: 3 (lower is better)
Translates to: RGHTLIIPQARQKSKQARGLCHN*KLKSLT
Trigger: CGTGAGGCTTTTGAGTTTCAAATTGTGACAAAGTCC...ACGAGCTTGCTTTGATTTTTGTCTCGCCTGCGGTATAATCAGAGTGTGGCCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR GCA 72 bp TGGGATTCTGATGGATCGAAGATGGCTTCTATTGCCTaGCTTGAAAACAGAAAGCTAAAAGAAAGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: WDSDGSKMASIA*LENRKLKERAP
Trigger: GGGGGCTCTTTCTTTTAGCTTTCTGTTTTCAAGGCAGGCAATAGAAGCCATCTTCGATCCATCAGAATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR GCA 72 bp TTTTATATAAAGGAAAAACAAAGAACTCATCACCTCTaGTATGCCCACATGTCAGGTAAGCTCAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: FYIKEKQRTHHL*YAHMSGKLRAW
Trigger: CCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTCTTTGTTTTTCCTTTATATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp AGTGGGGGTGGTGGTGGCTGCAGGCTCACCCCAGAAATAGGCTGGTCCAGCCCCGCCTGGAGGGGGCACTaGAGCTGCACTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGGGGGCRLTPEIGWSSPAWRGH*SCTGLC
Trigger: GCAGAGCCCAGTGCAGCTGCAGTGCCCCCTCCAGGC...GGGGCTGGACCAGCCTATTTCTGGGGTGAGCCTGCAGCCACCACCACCCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGTGGGTCATGCCTCGGATGCTCACCTaGAGGCCCCGGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VKGGDSVWHHRPVSRWVMPRMLT*RPRGAW
Trigger: CCAGGCACCCCGGGGCCTGCAGGTGAGCATCCGAGG...CATGACCCACCTGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp TGTGCCAAACAGCAGCAGCAGCAGCAGCAGTGGGTGTaGAGACACCCGGGCCTCGCTCCAGGCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CAKQQQQQQQWV*RHPGLAPGQPG
Trigger: CCCAGGCTGGCCTGGAGCGAGGCCCGGGTGTCTCAACACCCACTGCTGCTGCTGCTGCTGCTGTTTGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp AGTGGGGGTGGTGGTGGCTGCAGGCTCACCCCAGAAATAGGCTGGTCCAGCCCCCACCCTGGAGGTCAGTaGGGTCCCAGGAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SGGGGGCRLTPEIGWSSPHPGGQ*GPRSCS
Trigger: ACTACAGCTCCTGGGACCTCACTGACCTCCAGGGTG...GGGGCTGGACCAGCCTATTTCTGGGGTGAGCCTGCAGCCACCACCACCCCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCCCAGAGCTGCCTCTCCTCGGATaGTCACCTGCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: AVERVASWKVVLGWSGPELPLLG*SPAGPG
Trigger: CCCGGGGCCTGCAGGTGAGCATCCGAGGAGAGGCAG...CTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGGGGACCCGCGGTCAATaGGGCCGGAGAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: DCDASESRVGTLCGTTGPGTRGQ*GRRRVL
Trigger: TAGCACCCTTCTCCGGCCCCATTGACCGCGGGTCCC...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGTGGGTCATGCCTCCACTGAGGTCCTaGGCTTCCACGTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: VKGGDSVWHHRPVSRWVMPPLRS*ASTWTK
Trigger: CTTGGTCCACGTGGAAGCTCAGGACCTCAGTGGAGG...CATGACCCACCTGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp AGTGGGGGTGGTGGTGGCTGCAGGCTCACCCCAGAAATAGGCTGGTCCAGCCCCTGCACTGGGCTCTGCTaGAGGTCCACACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: SGGGGGCRLTPEIGWSSPCTGLC*RSTPPS
Trigger: TGAAGGTGGTGTGGACCTGCAGCAGAGCCCAGTGCA...GGGGCTGGACCAGCCTATTTCTGGGGTGAGCCTGCAGCCACCACCACCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGCCACCACTGCCACCTaGCCTCTGAGGACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPATTAT*PLRTCV
Trigger: GACACAGGTCCTCAGAGGCCAGGTGGCAGTGGTGGC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGAGTCCTGAAGCACTaGGTTCCCGCAGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPGVLKH*VPAGSL
Trigger: CAAGCTGCCTGCGGGAACTCAGTGCTTCAGGACTCC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCCCAGAGCCACCCCTGAGTGGTTaGCCTGCATGGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AVERVASWKVVLGWSGPEPPLSG*PAWCSG
Trigger: CCCAGAGCACCATGCAGGGCAACCACTCAGGGGTGG...CTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGTGGGTCATGCATGTCGGTGCTGGGTaGCCTCAGGTAATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VKGGDSVWHHRPVSRWVMHVGAG*PQVIPV
Trigger: GACTGGGATTACCTGAGGCCACCCAGCACCGACATG...CATGACCCACCTGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp AGTGGGGGTGGTGGTGGCTGCAGGCTCACCCCAGAAATAGGCTGGTCCAGCCCCCATTCATGTCGGTGCTaGGTGGCCTCAGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SGGGGGCRLTPEIGWSSPHSCRC*VASGNP
Trigger: GGGATTACCTGAGGCCACCCAGCACCGACATGAATG...GGGGCTGGACCAGCCTATTTCTGGGGTGAGCCTGCAGCCACCACCACCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp CCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGCAGTaGTGGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRVSEGVSFQLQ*WSCALSGGSRR
Trigger: CCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATGACACACCCTCTGAGACCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGGTGTGTACCGTGCCTaGCACATAGGGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPGVYRA*HIGVVC
Trigger: GCAGACAACCCCTATGTGTCAGGCACGGTACACACC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCCCGCCGGAAGTCAACCTTaGCCAGCTCCCAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HCSGESGFLEGGVGLVWPAGSQP*PAPSQS
Trigger: GCTCTGACTGGGAGCTGGTCAAGGTTGACTTCCGGC...GGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGGGACTCCGAGGAAGATaGGCGCTCAAACCCGTAGTC +
Preference number: 4 (lower is better)
Translates to: DCDASESRVGTLCGTTGPGLRGR*ALKPVV
Trigger: GACTACGGGTTTGAGCGCTCATCTTCCTCGGAGTCC...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp CACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCCCACCATCGCCTGGTTGTaGGTCGCGTCTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HCSGESGFLEGGVGLVWPTIAWL*VASPLS
Trigger: GCTCAAGGGAGACGCGACGCACAACCAGGCGATGGT...GGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp CACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCCCCGGCTTGCCTCGAGCTaGGCACATTCTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: HCSGESGFLEGGVGLVWPRLASS*AHSPAP
Trigger: TGGTGCTGGAGAATGTGCGCAGCTCGAGGCAAGCCG...GGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTCTTCCTCAAAGACCTaGCTCCAGGTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: DCDASESRVGTLCGTTGPSSSKT*LQVCPQ
Trigger: CTGCGGGCACACCTGGAGGCAGGTCTTTGAGGAAGA...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAACAGCCCAGAACACGTaGTCCTTGGTCACCCGTTCC +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPTAQNT*SLVTRS
Trigger: GGAACGGGTGACCAAGGACCACGTGTTCTGGGCTGT...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCGCTCCTCTGGGATGCTaGTCTCCTTGGAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSAPLGC*SPWRAV
Trigger: GACTGCTCTCCAAGGAGACCAGCATCCCAGAGGAGC...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp CATTCCAGCTGCAGTTGTGGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGAGCACATAGGGGTTGTCTaGCCACCGCAAGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSSCSCGPVPSPEEAGGEHIGVV*PPQVQV
Trigger: CACCTGCACTTGCGGTGGGCAGACAACCCCTATGTG...CTCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GGAGATGCTGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAAGGGGGCACTGCAGCTaGACTGGGCTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GDAALPPLFWLVLTRVPQRGHCS*TGLCCR
Trigger: CCTGCAGCAGAGCCCAGTGCAGCTGCAGTGCCCCCT...TTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCAGCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp CACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCCCGCAGCTCCTCTGGGATaGTGGTCTCCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HCSGESGFLEGGVGLVWPAAPLG*WSPWRA
Trigger: TGCTCTCCAAGGAGACCAGCATCCCAGAGGAGCTGC...GGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGGCAGAGCACTTGTTaGCAGTGGACTCCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DCDASESRVGTLCGTTGPWQSTC*QWTPRK
Trigger: CTTCCTCGGAGTCCACTGCCAACAAGTGCTCTGCCA...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp CATTCCAGCTGCAGTTGTGGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGAGGGCTCCTCTTCCTTGTaGGCCTTGGCAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HSSCSCGPVPSPEEAGGEGSSSL*ALAEAE
Trigger: TTCTGCCTCTGCCAAGGCCCACAAGGAAGAGGAGCC...CTCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGAGGAGACAAAGGGTTaGACCAGAAGTTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPEETKG*TRSWQS
Trigger: GCTCTGCCAACTTCTGGTTCAACCCTTTGTCTCCTC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp CATTCCAGCTGCAGTTGTGGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGAGAGCCTCATCATGGCCTaGCATGTTCTCAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: HSSCSCGPVPSPEEAGGESLIMA*HVLSPD
Trigger: GTCAGGGCTGAGAACATGGCAGGCCATGATGAGGCT...CTCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGCAGTGTACCATCGCCTaGTTGTGCGTCGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLQCTIA*LCVASP
Trigger: GGGAGACGCGACGCACAACCAGGCGATGGTACACTG...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGCAATGACACCACCGTaGTCCAGGTACAACACATGG +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPAMTPP*SRYNTW
Trigger: CCATGTGTTGTACCTGGACCACGGTGGTGTCATTGC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp CCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTGACTTGGCCGTAGGAGCAGGCAGGGGAGAGTTGACCTaGACAAAGAGCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PAHSVNLCWVPDLAVGAGRGELT*TKSTAS
Trigger: TGAGGCTGTGCTCTTTGTCCAGGTCAACTCTCCCCT...GCCTGCTCCTACGGCCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAGTGAGGTTCACCTCCTaGTTGACGCCAATGACAGGA +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPVRFTS*LTPMTG
Trigger: TCCTGTCATTGGCGTCAACCAGGAGGTGAACCTCAC...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCCATACAAGTCGGCTATaGTGGGCAGCCCTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSHTSRL*WAALAL
Trigger: TAAAGCCAGGGCTGCCCACCATAGCCGACTTGTATG...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCACTTCCTTGTGGGCCTTaGCAGAGGCAGAAGCACATA +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPLPCGP*QRQKHI
Trigger: TATGTGCTTCTGCCTCTGCCAAGGCCCACAAGGAAG...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTGACTTGGCCGTAGGAGCAGGCTATGTGTGGCTGGGCTaGGCAGTTGTAGATCAGACA +
Preference number: 4 (lower is better)
Translates to: PAHSVNLCWVPDLAVGAGYVWLG*AVVDQT
Trigger: TGTCTGATCTACAACTGCTCAGCCCAGCCACACATA...GCCTGCTCCTACGGCCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGGCTCGCCTGTCAGAGTaGGGTTCACGTACATGGCCT +
Preference number: 4 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLARLSE*GSRTWP
Trigger: AGGCCATGTACGTGAACCTCACTCTGACAGGCGAGC...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTACGAGCCTGGAGTCCTaGAGCACTGAGTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVTSLES*STEFPQ
Trigger: CTGCGGGAACTCAGTGCTTCAGGACTCCAGGCTCGT...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCAATGAAGCTGATTCTATaGGAGTTCAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPMKLIL*EFSACC
Trigger: GCAGCAGGCGCTGAACTCTCATAGAATCAGCTTCAT...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp TGGGGTTTCTGGGAGAAAGCCAGCAGAGGCCAGAATGACAGAACTAAGCTGGGCACCATCGCCTGGTTGTaGGTCGCGTCTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WGFWEKASRGQNDRTKLGTIAWL*VASPLS
Trigger: GCTCAAGGGAGACGCGACGCACAACCAGGCGATGGT...GCCCAGCTTAGTTCTGTCATTCTGGCCTCTGCTGGCTTTCTCCCAGAAACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR CCA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGACAGCGTCTCATCCCCTaGCTCGCTCAGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGQRLIP*LAQQPI
Trigger: GATGGGTTGCTGAGCGAGCCAGGGGATGAGACGCTG...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGAAGGACCACCCCTGAGTaGTTGCCCTGCATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGRTTPE*LPCMVL
Trigger: GAGCACCATGCAGGGCAACCACTCAGGGGTGGTCCT...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp TACATGGGGGAAATGAGGCCCAGAGTGGAGACAGGCTaGCACAAGCAGGCAGCGAGCAGACAGAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YMGEMRPRVETG*HKQAASRQSLE
Trigger: TTCCAGGCTCTGTCTGCTCGCTGCCTGCTTGTGCAAGCCTGTCTCCACTCTGGGCCTCATTTCCCCCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR TCA 90 bp GCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCTGGCCCAGAGTTGTCAGGATCAAGATaGCGCTGCTGTTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AVERVASWKVVLGWSGPELSGSR*RCCSLL
Trigger: CAGGAGAGAACAGCAGCGTCATCTTGATCCTGACAA...CTCTGGGCCAGACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTGACTTGGCCGTAGGAGCAGGCCCTTGTTGTAGGTTATaGCTGTGGTCACCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PAHSVNLCWVPDLAVGAGPCCRL*LWSPCH
Trigger: ATGGCAAGGTGACCACAGTCATAACCTACAACAAGG...GCCTGCTCCTACGGCCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGACACTGAGGTGCTGGTaGAGTTGTGTGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLTLRCW*SCVCST
Trigger: CGTGGAGCACACACAACTTCACCAGCACCTCAGTGT...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCCTTGTAGAGGATGAATaGTCCTACTGCAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSLVEDE*SYCKEP
Trigger: GGGCTCTTTGCAGTAGGAGCATTCATCCTCTACAAG...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGCCGGCGGCTGGCAGTTaGTGGGCTTCCCATTCATGT +
Preference number: 4 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRPAAGS*WASHSC
Trigger: ACATGAATGGGAAGCCCACCAACTGCCAGCCGCCGG...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp AAAACCCAAATAGCTAGGGTAAGCCTGCCCGTGTCCTaGAGAGTGAGAGCGTGCTCGAGGAAGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: KTQIARVSLPVS*RVRACSRKAPQ
Trigger: CTGGGGTGCCTTCCTCGAGCACGCTCTCACTCTCAAGGACACGGGCAGGCTTACCCTAGCTATTTGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp ACCACCACTCCCCAGCAGGGCGGACTTTGTCACAATTaGAAACTCAAAAGCCTCACGGCAGGCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TTTPQQGGLCHN*KLKSLTAGREA
Trigger: TGCCTCCCTGCCTGCCGTGAGGCTTTTGAGTTTCAAATTGTGACAAAGTCCGCCCTGCTGGGGAGTGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR TCA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGACCGATAGCCTCCACTaGGGTCCTGAGCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRTDSLH*GPELPR
Trigger: ACGTGGAAGCTCAGGACCTCAGTGGAGGCTATCGGT...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTCCCATCCACGAACACTaGGGTGCTGGTGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVPIHEH*GAGEVV
Trigger: CACAACTTCACCAGCACCTCAGTGTTCGTGGATGGG...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGGTCTCTTGTCACTTGTaGGGCTCCTCTTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLVSCHL*GSSSLW
Trigger: CCACAAGGAAGAGGAGCCTCACAAGTGACAAGAGAC...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGCTGCCACCTGGCCTCTaGGGACCTGTGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVLPPGL*GPVSVS
Trigger: GGACACAGACACAGGTCCTCAGAGGCCAGGTGGCAG...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGGCATCTCACGAGAGTTaGTGCTCAGGACCACCCCTG +
Preference number: 4 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRASHES*CSGPPL
Trigger: CAGGGGTGGTCCTGAGCATCAACTCTCGTGAGATGC...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGAACTTTCCAGAACCTTaGCCATGTCTGCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: DCDASESRVGTLCGTTGPNFPEP*PCLHGS
Trigger: ACTACCATGCAGACATGGGCAAGGTTCTGGAAAGTT...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp TTGCACAAGCAGGCAGCGAGCAGACAGAGCCTGGAATATGGTAAAGATCTGCTGCAGTGTACCATCGCCTaGTTGTGCGTCGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LHKQAASRQSLEYGKDLLQCTIA*LCVASP
Trigger: GGGAGACGCGACGCACAACCAGGCGATGGTACACTG...CAGCAGATCTTTACCATATTCCAGGCTCTGTCTGCTCGCTGCCTGCTTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR CCA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGAGAACACGTGGTCCTTaGTCACCCGTTCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLRTRGP*SPVPAE
Trigger: TTCTGCAGGAACGGGTGACCAAGGACCACGTGTTCT...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTCACAAGCAGCTCCTCTaGGATGCTGGTCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVHKQLL*DAGLLG
Trigger: TCCAAGGAGACCAGCATCCCAGAGGAGCTGCTTGTG...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGAGTGGTTGCCCTGCATaGTGCTCTGGGCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRSGCPA*CSGHPH
Trigger: GTGAGGATGCCCAGAGCACCATGCAGGGCAACCACT...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp CACCAGGCTTCATCCTGGTTGTGTAGAGTCAGACCTTaGCCTGGATTCATGCGTAGACACCTGGAGCCCGAC +
Preference number: 4 (lower is better)
Translates to: HQASSWLCRVRP*PGFMRRHLEPD
Trigger: GTCGGGCTCCAGGTGTCTACGCATGAATCCAGGCAAAGGTCTGACTCTACACAACCAGGATGAAGCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR TCA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGGAGCGGAAGCTGATGTaGCCAAAGACCGTCATGACC +
Preference number: 4 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRERKLM*PKTVMT
Trigger: GGTCATGACGGTCTTTGGTCACATCAGCTTCCGCTC...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGAAGTCAGAGCGGAAGCTaGTGTGACCAAAGACCGTCA +
Preference number: 4 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGSQSGS*CDQRPS
Trigger: TGACGGTCTTTGGTCACATCAGCTTCCGCTCTGACT...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGCGGACACTCGGTAGATaGCAGGACTCTCATAGTGAT +
Preference number: 4 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLRTLGR*QDSHSD
Trigger: ATCACTATGAGAGTCCTGGCATCTACCGAGTGTCCG...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTACAGCTTGCTGTCCTTaGTGTAGGCCAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVTACCP*CRPAPC
Trigger: ACAAGGTGCTGGCCTACACCAAGGACAGCAAGCTGT...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GGAGATGCTGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAAGCACTTGTTGGCAGTaGACTCCGAGGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GDAALPPLFWLVLTRVPQSTCWQ*TPRKMS
Trigger: GCTCATCTTCCTCGGAGTCCACTGCCAACAAGTGCT...TTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCAGCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp CATTCCAGCTGCAGTTGTGGTCCTGTGCCCTCTCCGGAGGAAGCAGGAGGAGAGGTACACTGTCCTGCCTaGACGTTTCCTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: HSSCSCGPVPSPEEAGGEVHCPA*TFPFEL
Trigger: AAGTTCAAAAGGAAACGTCCAGGCAGGACAGTGTAC...CTCTCCTCCTGCTTCCTCCGGAGAGGGCACAGGACCACAACTGCAGCTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp TTCCCAGGAGATGCTGCCCTCCCACCCCTCTTCTGGTaGGTTCTTACAAGGGTTCCTCAAACCATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: FPGDAALPPLFW*VLTRVPQTIGH
Trigger: ATGCCCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCAGCATCTCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCACTTGGTTCGGTTTGTTaGTGTTGCCTTCAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: DASESRVGTLCGTTGPCPLGSVC*CCLQKD
Trigger: ATCTTTTTGAAGGCAACATCAACAAACCGAACCAAG...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGATACTCCACCAGCTGTaGGCCCAGGTTACCTGCACC +
Preference number: 4 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVILHQL*AQVTCT
Trigger: GGTGCAGGTAACCTGGGCTCACAGCTGGTGGAGTAT...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGGCTCAGGACCACCCCTaGGTGGTTGCCCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: RVCLRPLLLYGSHFFLREAQDHP*VVALHG
Trigger: ACCATGCAGGGCAACCACTCAGGGGTGGTCCTGAGC...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGAGGTACAACACATGGTaGTCTTCCTCAAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLRYNTW*SSSKTC
Trigger: GCAGGTCTTTGAGGAAGAGCACCATGTGTTGTACCT...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTCACGTGGACCAAGTTTaGGTCGTCATCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: VFTLQWREWLPGRWCWVGHVDQV*VVIHPR
Trigger: TCTGGGGTGGATGACGACCCAAACTTGGTCCACGTG...ACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTTTCTCATTGTGCATCTaGGCGTACACTGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVFSLCI*AYTVLP
Trigger: AGGCAGGACAGTGTACGCCCAGATGCACAATGAGAA...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGCGCCCTCATCAGTGCTaGGGAAGAGGCTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RVCLRPLLLYGSHFFLRERPHQC*GRGSVP
Trigger: GGGAACAGAGCCTCTTCCTCAGCACTGATGAGGGCG...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGCTGCAAAGAGCCCAATaGCAAAGAGGACCACCACGG +
Preference number: 4 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVLQRAQ*QRGPPR
Trigger: CCGTGGTGGTCCTCTTTGTCATTGGGCTCTTTGCAG...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp AGAAAATCACAGGCCAGAGTTATGTCTGAGGTGGCAGAGCACCATGCCCGGGGCAACCTTGCCCATGTCTaGATGGTAGTACTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RKSQARVMSEVAEHHARGNLAHV*MVVLCQ
Trigger: CTGACAAAGTACTACCATGCAGACATGGGCAAGGTT...GCCCCGGGCATGGTGCTCTGCCACCTCAGACATAACTCTGGCCTGTGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR GCA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTTTGGTCACCCGTTCCTaGAGAAGTGTCCACTTCTTT +
Preference number: 4 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVLVTRS*RSVHFF
Trigger: AAAGAAGTGGACACTTCTGCAGGAACGGGTGACCAA...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGGCGGCTGGCAGTTGGTaGGCTTCCCATTCATGTCGG +
Preference number: 4 (lower is better)
Translates to: RVCLRPLLLYGSHFFLREAAGSW*ASHSCR
Trigger: CCGACATGAATGGGAAGCCCACCAACTGCCAGCCGC...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGGCCACAAACACCTGCTaGTCATCCGTGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVATNTC*SSVLMI
Trigger: GATCATCAGCACGGATGAGCAGCAGGTGTTTGTGGC...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGAACCTTGCCCATGTCTaGATGGTAGTACTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRNLAHV*MVVLCQ
Trigger: CTGACAAAGTACTACCATGCAGACATGGGCAAGGTT...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp GTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTATGACACATACAGCTTaGTGTCCTTGGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VFTLQWREWLPGRWCWVGMTHTA*CPWCRP
Trigger: TGGCCTACACCAAGGACAGCAAGCTGTATGTGTCAT...ACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
3UTR CAA 72 bp AAATGTTCAAACCACCACTCCCCAGCAGGGCGGACTTaGTCACAATTTGAAACTCAAAAGCCTCACGGCAGG +
Preference number: 4 (lower is better)
Translates to: KCSNHHSPAGRT*SQFETQKPHGR
Trigger: CCTGCCGTGAGGCTTTTGAGTTTCAAATTGTGACAAAGTCCGCCCTGCTGGGGAGTGGTGGTTTGAACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
3UTR CAA 72 bp CCAGCAGAGGCCAGAATGACAGAACTAAGCTGGGCGTaGTGCAGTGTCCAGTTCATGCTCCTCATTTATACA +
Preference number: 4 (lower is better)
Translates to: PAEARMTELSWA*CSVQFMLLIYT
Trigger: TGTATAAATGAGGAGCATGAACTGGACACTGCACAACGCCCAGCTTAGTTCTGTCATTCTGGCCTCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR GCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGTCCCATTCATGTCGGTaGTGGGTGGCCTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: RVCLRPLLLYGSHFFLRESHSCR*WVASGN
Trigger: ATTACCTGAGGCCACCCAGCACCGACATGAATGGGA...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp AAGATCTGCTGTTTTCCTGCCTCTGGCACGTGGGTAAGCGGAGCTAGACTGGACCTTCCTTTTGTTAGCTaGGCAGATATAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KICCFPASGTWVSGARLDLPFVS*ADIEVV
Trigger: GACAACTTCTATATCTGCCCAGCTAACAAAAGGAAG...GTCCAGTCTAGCTCCGCTTACCCACGTGCCAGAGGCAGGAAAACAGCAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR CCA 90 bp GGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGAATGATTGGGCAGGGCATACTTaGGCAGCTTCATCAGGACAA +
Preference number: 4 (lower is better)
Translates to: GGEGKGILTSVSRQKVNDWAGHT*AASSGQ
Trigger: TTGTCCTGATGAAGCTGCCCAAGTATGCCCTGCCCA...ATCATTCACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGAATGATCACCTTCACACACATTaGACACCACCTTCCGGTACC +
Preference number: 4 (lower is better)
Translates to: GGEGKGILTSVSRQKVNDHLHTH*TPPSGT
Trigger: GGTACCGGAAGGTGGTGTCCAATGTGTGTGAAGGTG...ATCATTCACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR GCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGTGTTCCTTCTCATTGTaGATCTGGGCGTACACTGTC +
Preference number: 4 (lower is better)
Translates to: RVCLRPLLLYGSHFFLRECSFSL*IWAYTV
Trigger: GACAGTGTACGCCCAGATGCACAATGAGAAGGAACA...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CCA 90 bp GGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGAATGATTTGCCATCCACTTTCTaGTTTGCCAAGAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: GGEGKGILTSVSRQKVNDLPSTF*FAKKTP
Trigger: GGGAGTCTTCTTGGCAAACCAGAAAGTGGATGGCAA...ATCATTCACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR TCA 90 bp GCAGATGTGACATTCACTTTTGTCTCTTTCATACATATTGCATGCCATGGGCTCTTGTCAGGATCAAGATaGCGCTGCTGTTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ADVTFTFVSFIHIACHGLLSGSR*RCCSLL
Trigger: CAGGAGAGAACAGCAGCGTCATCTTGATCCTGACAA...GAGCCCATGGCATGCAATATGTATGAAAGAGACAAAAGTGAATGTCACATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR CCA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGCTTCCTTTTGTTAGCTaGGCAGATATAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: RVCLRPLLLYGSHFFLRELPFVS*ADIEVV
Trigger: GACAACTTCTATATCTGCCCAGCTAACAAAAGGAAG...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 90 bp CGCGCGAAGCCGAAGCCGCACCGGCCACCGGCACCGCCCGAGCCCTaGGCCCCTTGCCCGGAGCTGGGGCGCCATCGGTGCTGGGACCCG +
Preference number: 5 (lower is better)
Translates to: RAKPKPHRPPAPPEP*APCPELGRHRCWDP
Trigger: CGGGTCCCAGCACCGATGGCGCCCCAGCTCCGGGCAAGGGGCGCAGGGCTCGGGCGGTGCCGGTGGCCGGTGCGGCTTCGGCTTCGCGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS GCA 90 bp CCGAAGCCGCACCGGCCACCGGCACCGCCCGAGCCCTGCGCCCCTTaGCCGGAGCTGGGGCGCCATCGGTGCTGGGACCCGAAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: PKPHRPPAPPEPCAP*PELGRHRCWDPKQN
Trigger: GTTCTGCTTCGGGTCCCAGCACCGATGGCGCCCCAGCTCCGGGCAAGGGGCGCAGGGCTCGGGCGGTGCCGGTGGCCGGTGCGGCTTCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS TCA 90 bp AGCAGCAGCGGCCACGAACGTGGCCAGCACGGCGGCAGCAGAGCCTaGAAGCTCCGGTCCGGCGCAGTAGGGCCAGGACGCTTCGGGGCG +
Preference number: 5 (lower is better)
Translates to: SSSGHERGQHGGSRA*KLRSGAVGPGRFGA
Trigger: CGCCCCGAAGCGTCCTGGCCCTACTGCGCCGGACCGGAGCTTTCAGGCTCTGCTGCCGCCGTGCTGGCCACGTTCGTGGCCGCTGCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS GCA 90 bp CGCGTCTCCCTTGAGCACGAACGACGTGCTGATGAGCGAGACCTGTaGGCGCGAAGCCGAAGCCGCACCGGCCACCGGCACCGCCCGAGC +
Preference number: 5 (lower is better)
Translates to: RVSLEHERRADERDL*ARSRSRTGHRHRPS
Trigger: GCTCGGGCGGTGCCGGTGGCCGGTGCGGCTTCGGCTTCGCGCGCACAGGTCTCGCTCATCAGCACGTCGTTCGTGCTCAAGGGAGACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS GCA 90 bp CTGTCGCACCACAAACAGCACATCTTCTCTAGGCCGCACGGCCACTaGCTCTCCTCGGATGCTCACCTGCAGGCCCCGGGGTGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSHHKQHIFSRPHGH*LSSDAHLQAPGCLE
Trigger: CTCCAGGCACCCCGGGGCCTGCAGGTGAGCATCCGAGGAGAGGCAGTGGCCGTGCGGCCTAGAGAAGATGTGCTGTTTGTGGTGCGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCATGCGTCGCGTCTCCCTaGAGCACGAACGACGTGCTG +
Preference number: 5 (lower is better)
Translates to: DASESRVGTLCGTTGPCPCVASP*STNDVL
Trigger: CAGCACGTCGTTCGTGCTCAAGGGAGACGCGACGCA...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTCCGGCGGCTGGCAGTaGGTGGGCTTCCCATTCATG +
Preference number: 5 (lower is better)
Translates to: DCDASESRVGTLCGTTGPSGGWQ*VGFPFM
Trigger: CATGAATGGGAAGCCCACCAACTGCCAGCCGCCGGA...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp ACCGCAAGTGCAGGTGCAGGTAACAGTCCGGCGGCTGGCAGTTGGTaGGCTTCCCATTCATGTCGGTGCTGGGTGGCCTCAGGTAATCCC +
Preference number: 5 (lower is better)
Translates to: TASAGAGNSPAAGSW*ASHSCRCWVASGNP
Trigger: GGGATTACCTGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGCCGCCGGACTGTTACCTGCACCTGCACTTGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GCTAGGCAGCCCCTCCAGACCAGACCTTCCCACCTCCTCCATGTTCTAGCACTCTGCGTCGCGTCTCCCTaGAGCACGAACGACGTGCTG +
Preference number: 5 (lower is better)
Translates to: ARQPLQTRPSHLLHVLALCVASP*STNDVL
Trigger: CAGCACGTCGTTCGTGCTCAAGGGAGACGCGACGCA...GAGTGCTAGAACATGGAGGAGGTGGGAAGGTCTGGTCTGGAGGGGCTGCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR CAA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCTGTACCATCGCCTGGTaGTGCGTCGCGTCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSCTIAW*CVASPL
Trigger: CAAGGGAGACGCGACGCACAACCAGGCGATGGTACA...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp CTGGAACTGATCGAGCACACGGACGAGCCTGGAGTCCTGAAGCACTaGGTTCCCGCAGGCAGCTTGCACTGTCACACGCACATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: LELIEHTDEPGVLKH*VPAGSLHCHTHIPS
Trigger: GCTGGGGATGTGCGTGTGACAGTGCAAGCTGCCTGCGGGAACTCAGTGCTTCAGGACTCCAGGCTCGTCCGTGTGCTCGATCAGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 90 bp AACAGTCCGGCGGCTGGCAGTTGGTGGGCTTCCCATTCATGTCGGTaGTGGGTGGCCTCAGGTAATCCCAGTCACGGCCCTTGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: NSPAAGSWWASHSCR*WVASGNPSHGPCCR
Trigger: CCTACAACAAGGGCCGTGACTGGGATTACCTGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGCCGCCGGACTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCCAGAACACGTGGTCCTaGGTCACCCGTTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSQNTWS*VTRSCR
Trigger: TCTGCAGGAACGGGTGACCAAGGACCACGTGTTCTG...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCGGGATGGAGGTGTCCTaGATGGCGGCAATGACACCA +
Preference number: 5 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSGMEVS*MAAMTP
Trigger: TGGTGTCATTGCCGCCATCAAGGACACCTCCATCCC...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp AGTGGGGGTGGTGGTGGCTGCAGGCTCACCCCAGAAATAGGCTGGTCCAGCCCCTCATCCACGCTGAACTaGAGGATCTTCAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: SGGGGGCRLTPEIGWSSPSSTLN*RIFRGM
Trigger: CATCCCCCTGAAGATCCTCAAGTTCAGCGTGGATGA...GGGGCTGGACCAGCCTATTTCTGGGGTGAGCCTGCAGCCACCACCACCCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGGAGGTGCTGGTGAAGTaGTGTGTGCTCCACGTGTGG +
Preference number: 5 (lower is better)
Translates to: DCDASESRVGTLCGTTGPEVLVK*CVLHVW
Trigger: CCACACGTGGAGCACACACAACTTCACCAGCACCTC...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp CAGCGTCTCATCCCCTGGCTCGCTCAGCAACCCATCCACGAACACTaGGGTGCTGGTGAAGTTGTGTGTGCTCCACGTGTGGCCCTCATC +
Preference number: 5 (lower is better)
Translates to: QRLIPWLAQQPIHEH*GAGEVVCAPRVALI
Trigger: GATGAGGGCCACACGTGGAGCACACACAACTTCACCAGCACCTCAGTGTTCGTGGATGGGTTGCTGAGCGAGCCAGGGGATGAGACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp CGGCGGCTGGCAGTTGGTGGGCTTCCCATTCATGTCGGTGCTGGGTaGCCTCAGGTAATCCCAGTCACGGCCCTTGTTGTAGGTTATGAC +
Preference number: 5 (lower is better)
Translates to: RRLAVGGLPIHVGAG*PQVIPVTALVVGYD
Trigger: GTCATAACCTACAACAAGGGCCGTGACTGGGATTACCTGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGCCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp AGTCCGGCGGCTGGCAGTTGGTGGGCTTCCCATTCATGTCGGTGCTaGGTGGCCTCAGGTAATCCCAGTCACGGCCCTTGTTGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: SPAAGSWWASHSCRC*VASGNPSHGPCCRL
Trigger: TAACCTACAACAAGGGCCGTGACTGGGATTACCTGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGCCGCCGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp GAGAGTTCAGCGCCTGCTGCACGGCTGCCAGTCTCTTGTCACTTGTaGGGCTCCTCTTCCTTGTGGGCCTTGGCAGAGGCAGAAGCACAT +
Preference number: 5 (lower is better)
Translates to: ESSAPAARLPVSCHL*GSSSLWALAEAEAH
Trigger: ATGTGCTTCTGCCTCTGCCAAGGCCCACAAGGAAGAGGAGCCTCACAAGTGACAAGAGACTGGCAGCCGTGCAGCAGGCGCTGAACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp TTGGGTCGTCATCCACCCCAGACACAGCCCAGAACACGTGGTCCTTaGTCACCCGTTCCTGCAGAAGTGTCCACTTCTTTCCCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: LGRHPPQTQPRTRGP*SPVPAEVSTSFPGP
Trigger: CGGACCTGGGAAAGAAGTGGACACTTCTGCAGGAACGGGTGACCAAGGACCACGTGTTCTGGGCTGTGTCTGGGGTGGATGACGACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS-3UTR CAA 90 bp CCAGCTCACAGTGTCAACCTGTGCTGGGTCCCTGACTTGGCCGTAGGAGCAGGCCCGGTAACTTCTCTGTaGGCCCATGATGCAGTGATC +
Preference number: 5 (lower is better)
Translates to: PAHSVNLCWVPDLAVGAGPVTSL*AHDAVI
Trigger: GATCACTGCATCATGGGCCAACAGAGAAGTTACCGG...GCCTGCTCCTACGGCCAAGTCAGGGACCCAGCACAGGTTGACACTGTGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GACTGTGATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGAGGTTCACCTCCTGGTaGACGCCAATGACAGGAACT +
Preference number: 5 (lower is better)
Translates to: DCDASESRVGTLCGTTGPRFTSW*TPMTGT
Trigger: AGTTCCTGTCATTGGCGTCAACCAGGAGGTGAACCT...CGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 90 bp CAGGGGAGAGTTGACCTGGACAAAGAGCACAGCCTCATCATGGCCTaGCATGTTCTCAGCCCTGACGGACACTCGGTAGATGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: QGRVDLDKEHSLIMA*HVLSPDGHSVDART
Trigger: AGTCCTGGCATCTACCGAGTGTCCGTCAGGGCTGAGAACATGGCAGGCCATGATGAGGCTGTGCTCTTTGTCCAGGTCAACTCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp GGGTGGAAGAGGAGCATCTCCACAAGGAAGGGGACAGGATACTTCTaGAACGTGGCGCCCTCATCAGTGCTGAGGAAGAGGCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GWKRSISTRKGTGYF*NVAPSSVLRKRLCS
Trigger: GGAACAGAGCCTCTTCCTCAGCACTGATGAGGGCGCCACGTTCCAGAAGTATCCTGTCCCCTTCCTTGTGGAGATGCTCCTCTTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS CCA 90 bp TGGCAGAGGCAGAAGCACATACAAGTCGGCTATGGTGGGCAGCCCTaGCTTTACCACAGTCACAAGCAGCTCCTCTGGGATGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: WQRQKHIQVGYGGQP*LYHSHKQLLWDAGL
Trigger: GAGACCAGCATCCCAGAGGAGCTGCTTGTGACTGTGGTAAAGCCAGGGCTGCCCACCATAGCCGACTTGTATGTGCTTCTGCCTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp TTGTGGGCCTTGGCAGAGGCAGAAGCACATACAAGTCGGCTATGGTaGGCAGCCCTGGCTTTACCACAGTCACAAGCAGCTCCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LWALAEAEAHTSRLW*AALALPQSQAAPLG
Trigger: TCCCAGAGGAGCTGCTTGTGACTGTGGTAAAGCCAGGGCTGCCCACCATAGCCGACTTGTATGTGCTTCTGCCTCTGCCAAGGCCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp TCCTTGTGGGCCTTGGCAGAGGCAGAAGCACATACAAGTCGGCTATaGTGGGCAGCCCTGGCTTTACCACAGTCACAAGCAGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SLWALAEAEAHTSRL*WAALALPQSQAAPL
Trigger: CAGAGGAGCTGCTTGTGACTGTGGTAAAGCCAGGGCTGCCCACCATAGCCGACTTGTATGTGCTTCTGCCTCTGCCAAGGCCCACAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp TGGGGTTTCTGGGAGAAAGCCAGCAGAGGCCAGAATGACAGAACTAAGCTGGGCTGTACCATCGCCTGGTaGTGCGTCGCGTCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: WGFWEKASRGQNDRTKLGCTIAW*CVASPL
Trigger: CAAGGGAGACGCGACGCACAACCAGGCGATGGTACA...GCCCAGCTTAGTTCTGTCATTCTGGCCTCTGCTGGCTTTCTCCCAGAAACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070720.8
CDS-3UTR CAA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTCCACGTGGACCAAGTTaGGGTCGTCATCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVPRGPS*GRHPPQ
Trigger: CTGGGGTGGATGACGACCCAAACTTGGTCCACGTGG...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GATGCCTCAGAGTCAAGGGTGGGGACTCTGTGTGGCACCACAGGCCCGTGTCCATGTGACTCACGGGACTaGTCATCTCCTGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: DASESRVGTLCGTTGPCPCDSRD*SSPVPS
Trigger: AGAAGGAACAGGAGATGACAAGTCCCGTGAGTCACA...TGGACACGGGCCTGTGGTGCCACACAGAGTCCCCACCCTTGACTCTGAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp GCGCACATTCTCCAGCACCAGGGAATAGCGAACCCCACGCAGGTCTaGCTGGTACAGGTTGTAGGTGTCTACCTGGTTCCACTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: AHILQHQGIANPTQV*LVQVVGVYLVPLLY
Trigger: GTACAGGAGTGGAACCAGGTAGACACCTACAACCTGTACCAGTCAGACCTGCGTGGGGTTCGCTATTCCCTGGTGCTGGAGAATGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp CAGGTAGCTATGCATCTCACGAGAGTTGATGCTCAGGACCACCCCTaGGTGGTTGCCCTGCATGGTGCTCTGGGCATCCTCACTGTGACT +
Preference number: 5 (lower is better)
Translates to: QVAMHLTRVDAQDHP*VVALHGALGILTVT
Trigger: AGTCACAGTGAGGATGCCCAGAGCACCATGCAGGGCAACCACTCAGGGGTGGTCCTGAGCATCAACTCTCGTGAGATGCATAGCTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 90 bp ACCCCAGACACAGCCCAGAACACGTGGTCCTTGGTCACCCGTTCCTaGAGAAGTGTCCACTTCTTTCCCAGGTCCGATGACACATACAGC +
Preference number: 5 (lower is better)
Translates to: TPDTAQNTWSLVTRS*RSVHFFPRSDDTYS
Trigger: GCTGTATGTGTCATCGGACCTGGGAAAGAAGTGGACACTTCTGCAGGAACGGGTGACCAAGGACCACGTGTTCTGGGCTGTGTCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS CCA 90 bp TCCACGAACACTGAGGTGCTGGTGAAGTTGTGTGTGCTCCACGTGTaGCCCTCATCCACGCTGAACTTGAGGATCTTCAGGGGGATGGAG +
Preference number: 5 (lower is better)
Translates to: STNTEVLVKLCVLHV*PSSTLNLRIFRGME
Trigger: CTCCATCCCCCTGAAGATCCTCAAGTTCAGCGTGGATGAGGGCCACACGTGGAGCACACACAACTTCACCAGCACCTCAGTGTTCGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGTTGGGCAGGGCATACTaGGGCAGCTTCATCAGGACA +
Preference number: 5 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLLGRAY*GSFIRT
Trigger: TGTCCTGATGAAGCTGCCCAAGTATGCCCTGCCCAA...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp CAGCTAGAGGAGTTGGCCTTTCCACGGGTCTCAGAGGGTGTGTCATTCCAGCTGAAGTTGGCAGAGCACTaGTTGGCAGTGGACTCCGAG +
Preference number: 5 (lower is better)
Translates to: QLEELAFPRVSEGVSFQLKLAEH*LAVDSE
Trigger: CTCGGAGTCCACTGCCAACAAGTGCTCTGCCAACTT...CAGCTGGAATGACACACCCTCTGAGACCCGTGGAAAGGCCAACTCCTCTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGAGCCTGCAGGGGAGAGTaGACCTGGACAAAGAGCACA +
Preference number: 5 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGACRGE*TWTKST
Trigger: TGTGCTCTTTGTCCAGGTCAACTCTCCCCTGCAGGC...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp GGTCACCCGTTCCTGCAGAAGTGTCCACTTCTTTCCCAGGTCCGATaGCACATACAGCTTGCTGTCCTTGGTGTAGGCCAGCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: GHPFLQKCPLLSQVR*HIQLAVLGVGQHLV
Trigger: GACAAGGTGCTGGCCTACACCAAGGACAGCAAGCTGTATGTGTCATCGGACCTGGGAAAGAAGTGGACACTTCTGCAGGAACGGGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS TCA 90 bp ACCCCTGAGTGGTTGCCCTGCATGGTGCTCTGGGCATCCTCACTGTaGCTCACGGGACTTGTCATCTCCTGTTCCTTCTCATTGTGCATC +
Preference number: 5 (lower is better)
Translates to: TPEWLPCMVLWASSL*LTGLVISCSFSLCI
Trigger: GATGCACAATGAGAAGGAACAGGAGATGACAAGTCCCGTGAGTCACAGTGAGGATGCCCAGAGCACCATGCAGGGCAACCACTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GGAGATGCTGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAATGATCTGTAGGTCCTaGGGCAGGGCATACTTGGGC +
Preference number: 5 (lower is better)
Translates to: GDAALPPLFWLVLTRVPQMICRS*GRAYLG
Trigger: GCCCAAGTATGCCCTGCCCAAGGACCTACAGATCAT...TTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCAGCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGATTGGCAGAGCACTTGTaGGCAGTGGACTCCGAGGAA +
Preference number: 5 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGLAEHL*AVDSEE
Trigger: TTCCTCGGAGTCCACTGCCAACAAGTGCTCTGCCAA...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGATGCATCTCACGAGAGTaGATGCTCAGGACCACCCCT +
Preference number: 5 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGCISRE*MLRTTP
Trigger: AGGGGTGGTCCTGAGCATCAACTCTCGTGAGATGCA...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp GCTCTTCCTCAAAGACCTGCCTCCAGGTGTGCCCGCAGTCAGATGTaGTGTACATCTCCTCTTTATACTCCACCAGCTGTGAGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALPQRPASRCARSQM*CTSPLYTPPAVSPG
Trigger: ACCTGGGCTCACAGCTGGTGGAGTATAAAGAGGAGATGTACATCACATCTGACTGCGGGCACACCTGGAGGCAGGTCTTTGAGGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp GGACAAAGAGCACAGCCTCATCATGGCCTGCCATGTTCTCAGCCCTaGCGGACACTCGGTAGATGCCAGGACTCTCATAGTGATGTCGAA +
Preference number: 5 (lower is better)
Translates to: GQRAQPHHGLPCSQP*RTLGRCQDSHSDVE
Trigger: TTCGACATCACTATGAGAGTCCTGGCATCTACCGAGTGTCCGTCAGGGCTGAGAACATGGCAGGCCATGATGAGGCTGTGCTCTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp TCCACCAGGATACGAAGCCCTCCTCGAAGGATGAAGCTGATTCTATaGGAGTTCAGCGCCTGCTGCACGGCTGCCAGTCTCTTGTCACTT +
Preference number: 5 (lower is better)
Translates to: STRIRSPPRRMKLIL*EFSACCTAASLLSL
Trigger: AAGTGACAAGAGACTGGCAGCCGTGCAGCAGGCGCTGAACTCTCATAGAATCAGCTTCATCCTTCGAGGAGGGCTTCGTATCCTGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 90 bp TTGGTTCGGTTTGTTGATGTTGCCTTCAAAAAGATGTACTCATCCTaGACGGTCAGGGACCCGCGGTCAATGGGGCCGGAGAAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: LVRFVDVAFKKMYSS*TVRDPRSMGPEKGA
Trigger: AGCACCCTTCTCCGGCCCCATTGACCGCGGGTCCCTGACCGTGCAGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 90 bp AAGGATGAAGCTGATTCTATGAGAGTTCAGCGCCTGCTGCACGGCTaGCAGTCTCTTGTCACTTGTGAGGCTCCTCTTCCTTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KDEADSMRVQRLLHG*QSLVTCEAPLPCGP
Trigger: AGGCCCACAAGGAAGAGGAGCCTCACAAGTGACAAGAGACTGGCAGCCGTGCAGCAGGCGCTGAACTCTCATAGAATCAGCTTCATCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGTCGGAGTCCCGGCACTaGCACACACGTGACGTGAGT +
Preference number: 5 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVSESRH*HTRDVS
Trigger: ACTCACGTCACGTGTGTGCAAGTGCCGGGACTCCGA...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GAACTCATCACCTCTGCTATGCCCACATGTCAGGTAAGCTCAGGGCCTGGTGGATTCACGTACATGGCCTaGAAGCCATCCCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: ELITSAMPTCQVSSGPGGFTYMA*KPSPRS
Trigger: GGATCTTGGGGATGGCTTCAAGGCCATGTACGTGAA...TCCACCAGGCCCTGAGCTTACCTGACATGTGGGCATAGCAGAGGTGATGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp CTGAGCAGTTGTAGATCAGACACGTGTAGTACCGATAGCCTCCACTaGGGTCCTGAGCTTCCACGTGGACCAAGTTTGGGTCGTCATCCA +
Preference number: 5 (lower is better)
Translates to: LSSCRSDTCSTDSLH*GPELPRGPSLGRHP
Trigger: TGGATGACGACCCAAACTTGGTCCACGTGGAAGCTCAGGACCTCAGTGGAGGCTATCGGTACTACACGTGTCTGATCTACAACTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS-3UTR CAA 90 bp GTGCTCGAGGAAGGCACCCCAGGCACTGGTGAGCTAAAGTGGCGGGCTATGTCCAGTACTTGGTTCGGTTaGTTGATGTTGCCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: VLEEGTPGTGELKWRAMSSTWFG*LMLPSK
Trigger: TTTTGAAGGCAACATCAACAAACCGAACCAAGTACT...GGACATAGCCCGCCACTTTAGCTCACCAGTGCCTGGGGTGCCTTCCTCGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp CTCATCAGTGCTGAGGAAGAGGCTCTGTTCCCGGTCACCGAGGGATaGGCTCACCAGGATGATCTTCCTTTTGTTAGCTGGGCAGATATA +
Preference number: 5 (lower is better)
Translates to: LISAEEEALFPVTEG*AHQDDLPFVSWADI
Trigger: TATATCTGCCCAGCTAACAAAAGGAAGATCATCCTGGTGAGCTCATCCCTCGGTGACCGGGAACAGAGCCTCTTCCTCAGCACTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS TCA 90 bp TGTAAGTCTGACCCAAGACACAGTCTTCAGGAGGAGACAAAGGGTTaGACCAGAAGTTGGCAGAGCACTTGTTGGCAGTGGACTCCGAGG +
Preference number: 5 (lower is better)
Translates to: CKSDPRHSLQEETKG*TRSWQSTCWQWTPR
Trigger: CCTCGGAGTCCACTGCCAACAAGTGCTCTGCCAACTTCTGGTTCAACCCTTTGTCTCCTCCTGAAGACTGTGTCTTGGGTCAGACTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp GTGAGGTTCACGTACATGGCCTTGAAGCCATCCCCAAGATCCACCTaGTATTTAGTGGTCAGGACATCACCCTGTTCCTGTCGCACCACA +
Preference number: 5 (lower is better)
Translates to: VRFTYMALKPSPRST*YLVVRTSPCSCRTT
Trigger: TGTGGTGCGACAGGAACAGGGTGATGTCCTGACCACTAAATATCAGGTGGATCTTGGGGATGGCTTCAAGGCCATGTACGTGAACCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTGGGTTGAACCAGAAGTaGGCAGAGCACTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: VFTLQWREWLPGRWCWVGGLNQK*AEHLLA
Trigger: TGCCAACAAGTGCTCTGCCAACTTCTGGTTCAACCC...ACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GGAAGAGGAGGGGAAGGGAAGGGAATACTGACTTCAGTTTCAAGGCAAAAGGTGTCTTCCTTGTGGGCCTaGGCAGAGGCAGAAGCACAT +
Preference number: 5 (lower is better)
Translates to: GRGGEGKGILTSVSRQKVSSLWA*AEAEAH
Trigger: ATGTGCTTCTGCCTCTGCCAAGGCCCACAAGGAAGA...CACCTTTTGCCTTGAAACTGAAGTCAGTATTCCCTTCCCTTCCCCTCCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 90 bp CACTGTCCTGCCTGGACGTTTCCTTTTGAACTTGTAGAGGATGAATaGTCCTACTGCAAAGAGCCCAATGACAAAGAGGACCACCACGGC +
Preference number: 5 (lower is better)
Translates to: HCPAWTFPFELVEDE*SYCKEPNDKEDHHG
Trigger: GCCGTGGTGGTCCTCTTTGTCATTGGGCTCTTTGCAGTAGGAGCATTCATCCTCTACAAGTTCAAAAGGAAACGTCCAGGCAGGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGCATCCACTTTCTGGTTaGCCAAGAAGACTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRHPLSG*PRRLPS
Trigger: TGAAGGGAGTCTTCTTGGCAAACCAGAAAGTGGATG...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp GTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTGGGTTGGTTTTGTTGTCACCGAGTaGTCCAAGGAAAGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VFTLQWREWLPGRWCWVGFVVTE*SKESRG
Trigger: GCCTCTGCTTTCCTTGGACAACTCGGTGACAACAAA...ACCAACCCAACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp AGGGTCTGTCTGAGACCTCTTCTTCTATATGGGTCACATTTCTTCCTTAGGGAGCCACCTTCACACACATaGGACACCACCTTCCGGTAC +
Preference number: 5 (lower is better)
Translates to: RVCLRPLLLYGSHFFLREPPSHT*DTTFRY
Trigger: GTACCGGAAGGTGGTGTCCAATGTGTGTGAAGGTGG...CTCCCTAAGGAAGAAATGTGACCCATATAGAAGAAGAGGTCTCAGACAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp CCGGGCAGGTATTTACACTGCAGTGGAGAGAGTGGCTTCCTGGAAGGTGGTGTTACTTGGTTCGGTTTGTaGATGTTGCCTTCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: PGRYLHCSGESGFLEGGVTWFGL*MLPSKR
Trigger: TCTTTTTGAAGGCAACATCAACAAACCGAACCAAGT...AACACCACCTTCCAGGAAGCCACTCTCTCCACTGCAGTGTAAATACCTGCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS-3UTR CAA 90 bp TGCCCTCCCACCCCTCTTCTGGTTGGTTCTTACAAGGGTTCCTCAAACCATAGGTTCGGTTTGTTGATGTaGCCTTCAAAAAGATGTACT +
Preference number: 5 (lower is better)
Translates to: CPPTPLLVGSYKGSSNHRFGLLM*PSKRCT
Trigger: AGTACATCTTTTTGAAGGCAACATCAACAAACCGAA...CCTATGGTTTGAGGAACCCTTGTAAGAACCAACCAGAAGAGGGGTGGGAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 90 bp AAAGTCACTTCGGCGATAGGAGACATAGTACTTGGTTCGGTTTGTTaGTGTTGCCTTCAAAAAGATGTACTCATCCTGCACGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: KVTSAIGDIVLGSVC*CCLQKDVLILHGQG
Trigger: TCCCTGACCGTGCAGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATCGCCGAAGTGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 90 bp GCTTCATCAGGACAAAGTCACTTCGGCGATAGGAGACATAGTACTTaGTTCGGTTTGTTGATGTTGCCTTCAAAAAGATGTACTCATCCT +
Preference number: 5 (lower is better)
Translates to: ASSGQSHFGDRRHST*FGLLMLPSKRCTHP
Trigger: AGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATCGCCGAAGTGACTTTGTCCTGATGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp GCCGAAGCCGCACCGGCCACCGGCACCGCCCGAGCCCTGCGCCCCTaGCCCGGAGCTGGGGCGCCATCGGTGCTGGGACCCGAAGCAGAA +
Preference number: 6 (lower is better)
Translates to: AEAAPATGTARALRP*PGAGAPSVLGPEAE
Trigger: TTCTGCTTCGGGTCCCAGCACCGATGGCGCCCCAGCTCCGGGCAAGGGGCGCAGGGCTCGGGCGGTGCCGGTGGCCGGTGCGGCTTCGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS GCA 72 bp CCCTGCGCCCCTTGCCCGGAGCTGGGGCGCCATCGGTaGTGGGACCCGAAGCAGAACCCGGACCGAGACCCG +
Preference number: 6 (lower is better)
Translates to: PCAPCPELGRHR*WDPKQNPDRDP
Trigger: CGGGTCTCGGTCCGGGTTCTGCTTCGGGTCCCAGCACCGATGGCGCCCCAGCTCCGGGCAAGGGGCGCAGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS GCA 72 bp CTTGAGCACGAACGACGTGCTGATGAGCGAGACCTGTaGGCGCGAAGCCGAAGCCGCACCGGCCACCGGCAC +
Preference number: 6 (lower is better)
Translates to: LEHERRADERDL*ARSRSRTGHRH
Trigger: GTGCCGGTGGCCGGTGCGGCTTCGGCTTCGCGCGCACAGGTCTCGCTCATCAGCACGTCGTTCGTGCTCAAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS GCA 72 bp CACAAACAGCACATCTTCTCTAGGCCGCACGGCCACTaGCTCTCCTCGGATGCTCACCTGCAGGCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: HKQHIFSRPHGH*LSSDAHLQAPG
Trigger: CCCCGGGGCCTGCAGGTGAGCATCCGAGGAGAGGCAGTGGCCGTGCGGCCTAGAGAAGATGTGCTGTTTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp GCGGCTGGCAGTTGGTGGGCTTCCCATTCATGTCGGTaGTGGGTGGCCTCAGGTAATCCCAGTCACGGCCCT +
Preference number: 6 (lower is better)
Translates to: AAGSWWASHSCR*WVASGNPSHGP
Trigger: AGGGCCGTGACTGGGATTACCTGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp GGTGCCTGGAGGGGGCACTGCAGCTGCACTGGGCTCTaGTGCAGGTCCACACCACCTTCACACACATTGGAC +
Preference number: 6 (lower is better)
Translates to: GAWRGHCSCTGL*CRSTPPSHTLD
Trigger: GTCCAATGTGTGTGAAGGTGGTGTGGACCTGCAGCAGAGCCCAGTGCAGCTGCAGTGCCCCCTCCAGGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp GCAGGTGCAGGTAACAGTCCGGCGGCTGGCAGTTGGTaGGCTTCCCATTCATGTCGGTGCTGGGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: AGAGNSPAAGSW*ASHSCRCWVAS
Trigger: TGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGCCGCCGGACTGTTACCTGCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp AGTGCAGGTGCAGGTAACAGTCCGGCGGCTGGCAGTTaGTGGGCTTCCCATTCATGTCGGTGCTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SAGAGNSPAAGS*WASHSCRCWVA
Trigger: GGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGCCGCCGGACTGTTACCTGCACCTGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp TCTCCTGTCCAGTGTACCATCGCCTGGTTGTGCGTCGCGTCTCCCTaGAGCACGAACGACGTGCTGATGAGCGAGACCTGTGCGCGCGAA +
Preference number: 6 (lower is better)
Translates to: SPVQCTIAWLCVASP*STNDVLMSETCARE
Trigger: TTCGCGCGCACAGGTCTCGCTCATCAGCACGTCGTTCGTGCTCAAGGGAGACGCGACGCACAACCAGGCGATGGTACACTGGACAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS TCA 72 bp ATCGAGCACACGGACGAGCCTGGAGTCCTGAAGCACTaGGTTCCCGCAGGCAGCTTGCACTGTCACACGCAC +
Preference number: 6 (lower is better)
Translates to: IEHTDEPGVLKH*VPAGSLHCHTH
Trigger: GTGCGTGTGACAGTGCAAGCTGCCTGCGGGAACTCAGTGCTTCAGGACTCCAGGCTCGTCCGTGTGCTCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp GCTGGCAGTTGGTGGGCTTCCCATTCATGTCGGTGCTaGGTGGCCTCAGGTAATCCCAGTCACGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: AGSWWASHSCRC*VASGNPSHGPC
Trigger: ACAAGGGCCGTGACTGGGATTACCTGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp CCTCTGGGATGCTGGTCTCCTTGGAGAGCAGTCGGGTaGCCACCAGTCCCACATCTTCCCTCCATTCAGGAG +
Preference number: 6 (lower is better)
Translates to: PLGCWSPWRAVG*PPVPHLPSIQE
Trigger: CTCCTGAATGGAGGGAAGATGTGGGACTGGTGGTCACCCGACTGCTCTCCAAGGAGACCAGCATCCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp CTGTTCTCTCCTGTCCAGTGTACCATCGCCTGGTTGTaGGTCGCGTCTCCCTTGAGCACGAACGACGTGCTG +
Preference number: 6 (lower is better)
Translates to: LFSPVQCTIAWL*VASPLSTNDVL
Trigger: CAGCACGTCGTTCGTGCTCAAGGGAGACGCGACGCACAACCAGGCGATGGTACACTGGACAGGAGAGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS CAA 72 bp CAGTGTACCATCGCCTGGTTGTGCGTCGCGTCTCCCTaGAGCACGAACGACGTGCTGATGAGCGAGACCTGT +
Preference number: 6 (lower is better)
Translates to: QCTIAWLCVASP*STNDVLMSETC
Trigger: ACAGGTCTCGCTCATCAGCACGTCGTTCGTGCTCAAGGGAGACGCGACGCACAACCAGGCGATGGTACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS CAA 72 bp CTGCTGTTCTCTCCTGTCCAGTGTACCATCGCCTGGTaGTGCGTCGCGTCTCCCTTGAGCACGAACGACGTG +
Preference number: 6 (lower is better)
Translates to: LLFSPVQCTIAW*CVASPLSTNDV
Trigger: CACGTCGTTCGTGCTCAAGGGAGACGCGACGCACAACCAGGCGATGGTACACTGGACAGGAGAGAACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000070720.8
CDS CAA 90 bp CACCCCTCTGACCTCAAGGATGTCGATGACCACGTTCTCCTCGGCTaGCCTCGAGCTGCGCACATTCTCCAGCACCAGGGAATAGCGAAC +
Preference number: 6 (lower is better)
Translates to: HPSDLKDVDDHVLLG*PRAAHILQHQGIAN
Trigger: GTTCGCTATTCCCTGGTGCTGGAGAATGTGCGCAGCTCGAGGCAAGCCGAGGAGAACGTGGTCATCGACATCCTTGAGGTCAGAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp GGCTCGCTCAGCAACCCATCCACGAACACTGAGGTGCTGGTGAAGTaGTGTGTGCTCCACGTGTGGCCCTCATCCACGCTGAACTTGAGG +
Preference number: 6 (lower is better)
Translates to: GSLSNPSTNTEVLVK*CVLHVWPSSTLNLR
Trigger: CCTCAAGTTCAGCGTGGATGAGGGCCACACGTGGAGCACACACAACTTCACCAGCACCTCAGTGTTCGTGGATGGGTTGCTGAGCGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp AGTCGGGTGACCACCAGTCCCACATCTTCCCTCCATTCAGGAGTGTaGGGGTTAAAGGTGTCCAGCTCCCTGGAGAACCGCAGAGGCACC +
Preference number: 6 (lower is better)
Translates to: SRVTTSPTSSLHSGV*GLKVSSSLENRRGT
Trigger: GGTGCCTCTGCGGTTCTCCAGGGAGCTGGACACCTTTAACCCCAACACTCCTGAATGGAGGGAAGATGTGGGACTGGTGGTCACCCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp TTTGGGTCGTCATCCACCCCAGACACAGCCCAGAACACGTGGTCCTaGGTCACCCGTTCCTGCAGAAGTGTCCACTTCTTTCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: FGSSSTPDTAQNTWS*VTRSCRSVHFFPRS
Trigger: GGACCTGGGAAAGAAGTGGACACTTCTGCAGGAACGGGTGACCAAGGACCACGTGTTCTGGGCTGTGTCTGGGGTGGATGACGACCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS TCA 72 bp CGCTCAGCAACCCATCCACGAACACTGAGGTGCTGGTaGAGTTGTGTGTGCTCCACGTGTGGCCCTCATCCA +
Preference number: 6 (lower is better)
Translates to: RSATHPRTLRCW*SCVCSTCGPHP
Trigger: TGGATGAGGGCCACACGTGGAGCACACACAACTTCACCAGCACCTCAGTGTTCGTGGATGGGTTGCTGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp ATCCCCTGGCTCGCTCAGCAACCCATCCACGAACACTaGGGTGCTGGTGAAGTTGTGTGTGCTCCACGTGTG +
Preference number: 6 (lower is better)
Translates to: IPWLAQQPIHEH*GAGEVVCAPRV
Trigger: CACACGTGGAGCACACACAACTTCACCAGCACCTCAGTGTTCGTGGATGGGTTGCTGAGCGAGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp ATGCATCTCACGAGAGTTGATGCTCAGGACCACCCCTaGGTGGTTGCCCTGCATGGTGCTCTGGGCATCCTC +
Preference number: 6 (lower is better)
Translates to: MHLTRVDAQDHP*VVALHGALGIL
Trigger: GAGGATGCCCAGAGCACCATGCAGGGCAACCACTCAGGGGTGGTCCTGAGCATCAACTCTCGTGAGATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp ACCTCAAGGATGTCGATGACCACGTTCTCCTCGGCTTaGCTCGAGCTGCGCACATTCTCCAGCACCAGGGAA +
Preference number: 6 (lower is better)
Translates to: TSRMSMTTFSSA*LELRTFSSTRE
Trigger: TTCCCTGGTGCTGGAGAATGTGCGCAGCTCGAGGCAAGCCGAGGAGAACGTGGTCATCGACATCCTTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp GCAGTTGGTGGGCTTCCCATTCATGTCGGTGCTGGGTaGCCTCAGGTAATCCCAGTCACGGCCCTTGTTGTA +
Preference number: 6 (lower is better)
Translates to: AVGGLPIHVGAG*PQVIPVTALVV
Trigger: TACAACAAGGGCCGTGACTGGGATTACCTGAGGCCACCCAGCACCGACATGAATGGGAAGCCCACCAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp ATCTCACGAGAGTTGATGCTCAGGACCACCCCTGAGTaGTTGCCCTGCATGGTGCTCTGGGCATCCTCACTG +
Preference number: 6 (lower is better)
Translates to: ISRELMLRTTPE*LPCMVLWASSL
Trigger: CAGTGAGGATGCCCAGAGCACCATGCAGGGCAACCACTCAGGGGTGGTCCTGAGCATCAACTCTCGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp AGCAACCCATCCACGAACACTGAGGTGCTGGTGAAGTaGTGTGTGCTCCACGTGTGGCCCTCATCCACGCTG +
Preference number: 6 (lower is better)
Translates to: SNPSTNTEVLVK*CVLHVWPSSTL
Trigger: CAGCGTGGATGAGGGCCACACGTGGAGCACACACAACTTCACCAGCACCTCAGTGTTCGTGGATGGGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp GTCACACGCACATCCCCAGCGTCCGTAAACTTTGTTGTCACCGAGTaGTCCAAGGAAAGCAGAGGCTGCAAGCTGTGGCCGATCCACCAG +
Preference number: 6 (lower is better)
Translates to: VTRTSPASVNFVVTE*SKESRGCKLWPIHQ
Trigger: CTGGTGGATCGGCCACAGCTTGCAGCCTCTGCTTTCCTTGGACAACTCGGTGACAACAAAGTTTACGGACGCTGGGGATGTGCGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp CTCCAGCACCAGGGAATAGCGAACCCCACGCAGGTCTaGCTGGTACAGGTTGTAGGTGTCTACCTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: LQHQGIANPTQV*LVQVVGVYLVP
Trigger: TGGAACCAGGTAGACACCTACAACCTGTACCAGTCAGACCTGCGTGGGGTTCGCTATTCCCTGGTGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp ACCTTGACCAGCTCCCAGTCAGAGCGGAAGCTGATGTaGCCAAAGACCGTCATGACCAGCGTCTCATCCCCT +
Preference number: 6 (lower is better)
Translates to: TLTSSQSERKLM*PKTVMTSVSSP
Trigger: AGGGGATGAGACGCTGGTCATGACGGTCTTTGGTCACATCAGCTTCCGCTCTGACTGGGAGCTGGTCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp GGCAGAGCACTTGTTGGCAGTGGACTCCGAGGAAGATaGGCGCTCAAACCCGTAGTCACAGAGGAAGTCGGA +
Preference number: 6 (lower is better)
Translates to: GRALVGSGLRGR*ALKPVVTEEVG
Trigger: TCCGACTTCCTCTGTGACTACGGGTTTGAGCGCTCATCTTCCTCGGAGTCCACTGCCAACAAGTGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp GCACAGCCTCATCATGGCCTGCCATGTTCTCAGCCCTaGCGGACACTCGGTAGATGCCAGGACTCTCATAGT +
Preference number: 6 (lower is better)
Translates to: AQPHHGLPCSQP*RTLGRCQDSHS
Trigger: ACTATGAGAGTCCTGGCATCTACCGAGTGTCCGTCAGGGCTGAGAACATGGCAGGCCATGATGAGGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp ACCTGGTTCCACTCCTGTACGGCCACAAACACCTGCTaGTCATCCGTGCTGATGATCTGTAGGTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: TWFHSCTATNTC*SSVLMICRSLG
Trigger: GCCCAAGGACCTACAGATCATCAGCACGGATGAGCAGCAGGTGTTTGTGGCCGTACAGGAGTGGAACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp TTCCCAGGTCCGATGACACATACAGCTTGCTGTCCTTaGTGTAGGCCAGCACCTTGTCCTCCTCCTTCGGGT +
Preference number: 6 (lower is better)
Translates to: FPGPMTHTACCP*CRPAPCPPPSG
Trigger: ACCCGAAGGAGGAGGACAAGGTGCTGGCCTACACCAAGGACAGCAAGCTGTATGTGTCATCGGACCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS CCA 72 bp GCCTTGGCAGAGGCAGAAGCACATACAAGTCGGCTATaGTGGGCAGCCCTGGCTTTACCACAGTCACAAGCA +
Preference number: 6 (lower is better)
Translates to: ALAEAEAHTSRL*WAALALPQSQA
Trigger: TGCTTGTGACTGTGGTAAAGCCAGGGCTGCCCACCATAGCCGACTTGTATGTGCTTCTGCCTCTGCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp CTGAACTTGAGGATCTTCAGGGGGATGGAGGTGTCCTaGATGGCGGCAATGACACCACCGTGGTCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: LNLRIFRGMEVS*MAAMTPPWSRY
Trigger: GTACCTGGACCACGGTGGTGTCATTGCCGCCATCAAGGACACCTCCATCCCCCTGAAGATCCTCAAGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp ACCACCAGTCCCACATCTTCCCTCCATTCAGGAGTGTaGGGGTTAAAGGTGTCCAGCTCCCTGGAGAACCGC +
Preference number: 6 (lower is better)
Translates to: TTSPTSSLHSGV*GLKVSSSLENR
Trigger: GCGGTTCTCCAGGGAGCTGGACACCTTTAACCCCAACACTCCTGAATGGAGGGAAGATGTGGGACTGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp TCATCCACGCTGAACTTGAGGATCTTCAGGGGGATGGAGGTGTCCTaGATGGCGGCAATGACACCACCGTGGTCCAGGTACAACACATGG +
Preference number: 6 (lower is better)
Translates to: SSTLNLRIFRGMEVS*MAAMTPPWSRYNTW
Trigger: CCATGTGTTGTACCTGGACCACGGTGGTGTCATTGCCGCCATCAAGGACACCTCCATCCCCCTGAAGATCCTCAAGTTCAGCGTGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp GCTGAGGAAGAGGCTCTGTTCCCGGTCACCGAGGGATaGGCTCACCAGGATGATCTTCCTTTTGTTAGCTGG +
Preference number: 6 (lower is better)
Translates to: AEEEALFPVTEG*AHQDDLPFVSW
Trigger: CCAGCTAACAAAAGGAAGATCATCCTGGTGAGCTCATCCCTCGGTGACCGGGAACAGAGCCTCTTCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS TCA 72 bp ATACGAAGCCCTCCTCGAAGGATGAAGCTGATTCTATaGGAGTTCAGCGCCTGCTGCACGGCTGCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: IRSPPRRMKLIL*EFSACCTAASL
Trigger: GAGACTGGCAGCCGTGCAGCAGGCGCTGAACTCTCATAGAATCAGCTTCATCCTTCGAGGAGGGCTTCGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp GTTGACCTGGACAAAGAGCACAGCCTCATCATGGCCTaGCATGTTCTCAGCCCTGACGGACACTCGGTAGAT +
Preference number: 6 (lower is better)
Translates to: VDLDKEHSLIMA*HVLSPDGHSVD
Trigger: ATCTACCGAGTGTCCGTCAGGGCTGAGAACATGGCAGGCCATGATGAGGCTGTGCTCTTTGTCCAGGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp ACTGAGGTGCTGGTGAAGTTGTGTGTGCTCCACGTGTaGCCCTCATCCACGCTGAACTTGAGGATCTTCAGG +
Preference number: 6 (lower is better)
Translates to: TEVLVKLCVLHV*PSSTLNLRIFR
Trigger: CCTGAAGATCCTCAAGTTCAGCGTGGATGAGGGCCACACGTGGAGCACACACAACTTCACCAGCACCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp CAGAAGCACATACAAGTCGGCTATGGTGGGCAGCCCTaGCTTTACCACAGTCACAAGCAGCTCCTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: QKHIQVGYGGQP*LYHSHKQLLWD
Trigger: ATCCCAGAGGAGCTGCTTGTGACTGTGGTAAAGCCAGGGCTGCCCACCATAGCCGACTTGTATGTGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp TTGGCAGAGGCAGAAGCACATACAAGTCGGCTATGGTaGGCAGCCCTGGCTTTACCACAGTCACAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: LAEAEAHTSRLW*AALALPQSQAA
Trigger: AGCTGCTTGTGACTGTGGTAAAGCCAGGGCTGCCCACCATAGCCGACTTGTATGTGCTTCTGCCTCTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp TCATCCACCCCAGACACAGCCCAGAACACGTGGTCCTaGGTCACCCGTTCCTGCAGAAGTGTCCACTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSTPDTAQNTWS*VTRSCRSVHFF
Trigger: AAAGAAGTGGACACTTCTGCAGGAACGGGTGACCAAGGACCACGTGTTCTGGGCTGTGTCTGGGGTGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS CAA 72 bp ACATCCCCAGCGTCCGTAAACTTTGTTGTCACCGAGTaGTCCAAGGAAAGCAGAGGCTGCAAGCTGTGGCCG +
Preference number: 6 (lower is better)
Translates to: TSPASVNFVVTE*SKESRGCKLWP
Trigger: CGGCCACAGCTTGCAGCCTCTGCTTTCCTTGGACAACTCGGTGACAACAAAGTTTACGGACGCTGGGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp TCCACTTCTTTCCCAGGTCCGATGACACATACAGCTTaGTGTCCTTGGTGTAGGCCAGCACCTTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: STSFPGPMTHTA*CPWCRPAPCPP
Trigger: AGGAGGACAAGGTGCTGGCCTACACCAAGGACAGCAAGCTGTATGTGTCATCGGACCTGGGAAAGAAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS GCA 72 bp TTTGTTGATGTTGCCTTCAAAAAGATGTACTCATCCTaGACGGTCAGGGACCCGCGGTCAATGGGGCCGGAG +
Preference number: 6 (lower is better)
Translates to: FVDVAFKKMYSS*TVRDPRSMGPE
Trigger: CTCCGGCCCCATTGACCGCGGGTCCCTGACCGTGCAGGATGAGTACATCTTTTTGAAGGCAACATCAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp TCTACCTGGTTCCACTCCTGTACGGCCACAAACACCTaGTGCTCATCCGTGCTGATGATCTGTAGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: STWFHSCTATNT*CSSVLMICRSL
Trigger: CAAGGACCTACAGATCATCAGCACGGATGAGCAGCAGGTGTTTGTGGCCGTACAGGAGTGGAACCAGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS GCA 72 bp CTCACGGGACTTGTCATCTCCTGTTCCTTCTCATTGTaGATCTGGGCGTACACTGTCCTGCCTGGACGTTTC +
Preference number: 6 (lower is better)
Translates to: LTGLVISCSFSL*IWAYTVLPGRF
Trigger: GAAACGTCCAGGCAGGACAGTGTACGCCCAGATGCACAATGAGAAGGAACAGGAGATGACAAGTCCCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp GGAGACAAAGGGTTGAACCAGAAGTTGGCAGAGCACTaGTTGGCAGTGGACTCCGAGGAAGATGAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: GDKGLNQKLAEH*LAVDSEEDERS
Trigger: TGAGCGCTCATCTTCCTCGGAGTCCACTGCCAACAAGTGCTCTGCCAACTTCTGGTTCAACCCTTTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp TTCCTGCAGAAGTGTCCACTTCTTTCCCAGGTCCGATaGCACATACAGCTTGCTGTCCTTGGTGTAGGCCAG +
Preference number: 6 (lower is better)
Translates to: FLQKCPLLSQVR*HIQLAVLGVGQ
Trigger: CTGGCCTACACCAAGGACAGCAAGCTGTATGTGTCATCGGACCTGGGAAAGAAGTGGACACTTCTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS TCA 72 bp TGTAGATCAGACACGTGTAGTACCGATAGCCTCCACTaGGGTCCTGAGCTTCCACGTGGACCAAGTTTGGGT +
Preference number: 6 (lower is better)
Translates to: CRSDTCSTDSLH*GPELPRGPSLG
Trigger: ACCCAAACTTGGTCCACGTGGAAGCTCAGGACCTCAGTGGAGGCTATCGGTACTACACGTGTCTGATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037370.14
ENSMUST00000135324.8
CDS TCA 72 bp CAAAGACCTGCCTCCAGGTGTGCCCGCAGTCAGATGTaGTGTACATCTCCTCTTTATACTCCACCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: QRPASRCARSQM*CTSPLYTPPAV
Trigger: CACAGCTGGTGGAGTATAAAGAGGAGATGTACATCACATCTGACTGCGGGCACACCTGGAGGCAGGTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp GACCCAAGACACAGTCTTCAGGAGGAGACAAAGGGTTaGACCAGAAGTTGGCAGAGCACTTGTTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: DPRHSLQEETKG*TRSWQSTCWQW
Trigger: CCACTGCCAACAAGTGCTCTGCCAACTTCTGGTTCAACCCTTTGTCTCCTCCTGAAGACTGTGTCTTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp GACAAAGGGTTGAACCAGAAGTTGGCAGAGCACTTGTaGGCAGTGGACTCCGAGGAAGATGAGCGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: DKGLNQKLAEHL*AVDSEEDERSN
Trigger: GTTTGAGCGCTCATCTTCCTCGGAGTCCACTGCCAACAAGTGCTCTGCCAACTTCTGGTTCAACCCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp TGTGATGTACATCTCCTCTTTATACTCCACCAGCTGTaGGCCCAGGTTACCTGCACCCATGATGAGACCAGG +
Preference number: 6 (lower is better)
Translates to: CDVHLLFILHQL*AQVTCTHDETR
Trigger: CCTGGTCTCATCATGGGTGCAGGTAACCTGGGCTCACAGCTGGTGGAGTATAAAGAGGAGATGTACATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp GGACTTGTCATCTCCTGTTCCTTCTCATTGTGCATCTaGGCGTACACTGTCCTGCCTGGACGTTTCCTTTTG +
Preference number: 6 (lower is better)
Translates to: GLVISCSFSLCI*AYTVLPGRFLL
Trigger: CAAAAGGAAACGTCCAGGCAGGACAGTGTACGCCCAGATGCACAATGAGAAGGAACAGGAGATGACAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp CACTTCGGCGATAGGAGACATAGTACTTGGTTCGGTTTGTTGATGTaGCCTTCAAAAAGATGTACTCATCCTGCACGGTCAGGGACCCGC +
Preference number: 6 (lower is better)
Translates to: HFGDRRHSTWFGLLM*PSKRCTHPARSGTR
Trigger: GCGGGTCCCTGACCGTGCAGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATCGCCGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS TCA 72 bp ACGTACATGGCCTTGAAGCCATCCCCAAGATCCACCTaGTATTTAGTGGTCAGGACATCACCCTGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: TYMALKPSPRST*YLVVRTSPCSC
Trigger: ACAGGAACAGGGTGATGTCCTGACCACTAAATATCAGGTGGATCTTGGGGATGGCTTCAAGGCCATGTACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 90 bp CAAAGTCACTTCGGCGATAGGAGACATAGTACTTGGTTCGGTTTGTaGATGTTGCCTTCAAAAAGATGTACTCATCCTGCACGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: QSHFGDRRHSTWFGL*MLPSKRCTHPARSG
Trigger: CCCTGACCGTGCAGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATCGCCGAAGTGACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CCA 72 bp GGACAAAGTCACTTCGGCGATAGGAGACATAGTACTTaGTTCGGTTTGTTGATGTTGCCTTCAAAAAGATGT +
Preference number: 6 (lower is better)
Translates to: GQSHFGDRRHST*FGLLMLPSKRC
Trigger: ACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATCGCCGAAGTGACTTTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp GATAGGAGACATAGTACTTGGTTCGGTTTGTTGATGTaGCCTTCAAAAAGATGTACTCATCCTGCACGGTCA +
Preference number: 6 (lower is better)
Translates to: DRRHSTWFGLLM*PSKRCTHPARS
Trigger: TGACCGTGCAGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp TTCGGCGATAGGAGACATAGTACTTGGTTCGGTTTGTaGATGTTGCCTTCAAAAAGATGTACTCATCCTGCA +
Preference number: 6 (lower is better)
Translates to: FGDRRHSTWFGL*MLPSKRCTHPA
Trigger: TGCAGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATCGCCGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14
CDS CAA 72 bp CACTTCGGCGATAGGAGACATAGTACTTGGTTCGGTTaGTTGATGTTGCCTTCAAAAAGATGTACTCATCCT +
Preference number: 6 (lower is better)
Translates to: HFGDRRHSTWFG*LMLPSKRCTHP
Trigger: AGGATGAGTACATCTTTTTGAAGGCAACATCAACAAACCGAACCAAGTACTATGTCTCCTATCGCCGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037370.14