RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SORBS2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031626

Ensembl transcript IDs: ENSMUST00000067065.14, ENSMUST00000067107.15, ENSMUST00000124544.8, ENSMUST00000125295.8, ENSMUST00000126067.8, ENSMUST00000130011.8, ENSMUST00000130850.8, ENSMUST00000132139.9, ENSMUST00000134321.8, ENSMUST00000134675.8, ENSMUST00000135336.9, ENSMUST00000138049.9, ENSMUST00000139103.2, ENSMUST00000139869.8, ENSMUST00000140088.8, ENSMUST00000141039.8, ENSMUST00000143820.8, ENSMUST00000145458.9, ENSMUST00000149752.8, ENSMUST00000150102.8, ENSMUST00000153798.8, ENSMUST00000155858.8, ENSMUST00000171337.10, ENSMUST00000210946.2, ENSMUST00000211095.2, ENSMUST00000238803.2

Found 1289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTGCTTGAACTCTaGTCCCCCAAGCCCCGGAGTGGGCCCACTGCAGGTTCGCTCTTC +
Preference number: 1 (lower is better)
Translates to: DPGRSARPGLVLLEL*SPKPRSGPTAGSLF
Trigger: GAAGAGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR GCA 90 bp AGGTGGAACTTGATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTaGTTGAACTCTGATCCCCCAAGCCCCGGAGTGGGCCCACTGCAG +
Preference number: 1 (lower is better)
Translates to: RWNLILGGPPGQGWS*LNSDPPSPGVGPLQ
Trigger: CTGCAGTGGGCCCACTCCGGGGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAAGTTCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR TCA 90 bp CTGCTGGTGATTTGGTGGCTGGCGGCAGGTGGAGATGGTAATGGCTaGTTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATG +
Preference number: 1 (lower is better)
Translates to: LLVIWWLAAGGDGNG*LGTIRHGSKGPAGM
Trigger: CATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAATCAGCCATTACCATCTCCACCTGCCGCCAGCCACCAAATCACCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CCA 90 bp CCTAATGGCTGTGGGGATTCCAGACTCATCCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGATGACCGTGACCCTCTTCTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: PNGCGDSRLIHRADP*VMRGFDDRDPLLFL
Trigger: GAGGAAGAGAAGAGGGTCACGGTCATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTGGATGAGTCTGGAATCCCCACAGCCATTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR TCA 90 bp AGGCACTGGGGAGGGCACCTCCTTAAACGCATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGGTCTGTAGGTCTGAGTCTTCGCAGC +
Preference number: 1 (lower is better)
Translates to: RHWGGHLLKRIGAIV*VAFRKRSVGLSLRS
Trigger: GCTGCGAAGACTCAGACCTACAGACCTCTTTCGAAAAGCCACTCAGACAATGGCACCGATGCGTTTAAGGAGGTGCCCTCCCCAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR GCA 90 bp GTTACTCGTGGTCAAGGCCGTCCAACTCATTCTCAGGGCCGACTTTaGAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGACA +
Preference number: 1 (lower is better)
Translates to: VTRGQGRPTHSQGRL*SRCTSVMLTCELET
Trigger: TGTCTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGTTGGACGGCCTTGACCACGAGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
3UTR CCA 90 bp CAGGACGCTGTGGCTTATTGGAGCTTAGGGTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAGGAGGGTCTGGGTAGTCCTCAGCAC +
Preference number: 1 (lower is better)
Translates to: QDAVAYWSLGCKFCH*SSCGAEEGLGSPQH
Trigger: GTGCTGAGGACTACCCAGACCCTCCTCTGCCCCACAGCTACTCCAGTGACAGAATTTACACCCTAAGCTCCAATAAGCCACAGCGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 90 bp CGGCCATGCTTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGACCTCGTTGGACACACCGGAAGAAT +
Preference number: 1 (lower is better)
Translates to: RPCLQSCWVFPGFCL*RTDRWRPRWTHRKN
Trigger: ATTCTTCCGGTGTGTCCAACGAGGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCATGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 90 bp GTGGTAGTGCAGAAGTACACCAAGCAAACATTTGCCTCTGCTCAATaGGATCGAGCACGCGCTAGCTACGTGGCCATGTGGCATTTGGTG +
Preference number: 1 (lower is better)
Translates to: VVVQKYTKQTFASAQ*DRARASYVAMWHLV
Trigger: CACCAAATGCCACATGGCCACGTAGCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGTGTACTTCTGCACTACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR TCA 90 bp CAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTaGGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: QSSGQKAGNCIFMKA*ACVSLRLPASPRLP
Trigger: TGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR TCA 90 bp AAGAGGTTTACCCATAGCAGAATCTCTGCCCACGCCCATGGCTTCTaGCCTCTCGGTCCTCTGAGACTAGTCAAGAATACTCGTCTGGCA +
Preference number: 1 (lower is better)
Translates to: KRFTHSRISAHAHGF*PLGPLRLVKNTRLA
Trigger: TGCCAGACGAGTATTCTTGACTAGTCTCAGAGGACCGAGAGGTCAGAAGCCATGGGCGTGGGCAGAGATTCTGCTATGGGTAAACCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR TCA 90 bp TTCCCAACTAGCTCTCCGTTAGCAAACCCTCTCTCTCCTACAGTCTaGGACTTCAAGGCGCTTAGCTGGCCTCAAACATCCTTCCCAACT +
Preference number: 1 (lower is better)
Translates to: FPTSSPLANPLSPTV*DFKALSWPQTSFPT
Trigger: AGTTGGGAAGGATGTTTGAGGCCAGCTAAGCGCCTTGAAGTCTCAGACTGTAGGAGAGAGAGGGTTTGCTAACGGAGAGCTAGTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR TCA 90 bp TTCCTTCCAAGTTACCAGTTCCTCCCATTCATCTTTTCCTGTGGCTaGAGAGGTTTACCCATAGCAGAATCTCTGCCCACGCCCATGGCT +
Preference number: 1 (lower is better)
Translates to: FLPSYQFLPFIFSCG*RGLPIAESLPTPMA
Trigger: AGCCATGGGCGTGGGCAGAGATTCTGCTATGGGTAAACCTCTTCAGCCACAGGAAAAGATGAATGGGAGGAACTGGTAACTTGGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR GCA 90 bp AATAATCCTGTCGCCCTTTCGCAGGGAGAGTTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGCTATGGCTTCTCCAATCTCTCCGGG +
Preference number: 1 (lower is better)
Translates to: NNPVALSQGEFHICV*IEVVLGYGFSNLSG
Trigger: CCCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACTTCAATGCAGACACAAATGTGGAACTCTCCCTGCGAAAGGGCGACAGGATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 90 bp CAGGCTCATATTCAAAAATACTCCTTGGCTCCGATCGAAATTTCCTaGTGTCCACCTTTCTGTCTGGAGGGTCCCAGTCATGCTTTAGTG +
Preference number: 1 (lower is better)
Translates to: QAHIQKYSLAPIEIS*CPPFCLEGPSHALV
Trigger: CACTAAAGCATGACTGGGACCCTCCAGACAGAAAGGTGGACACCAGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAATATGAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR GCA 90 bp ACAAAGGGATGCTCTCAAAATACCTGGGTAAAAAGTCAGAAGACATaGAGTCATAAGGCCTTGAGATTCATGCACCATTATGTCCTCCCG +
Preference number: 1 (lower is better)
Translates to: TKGCSQNTWVKSQKT*SHKALRFMHHYVLP
Trigger: CGGGAGGACATAATGGTGCATGAATCTCAAGGCCTTATGACTGCATGTCTTCTGACTTTTTACCCAGGTATTTTGAGAGCATCCCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CCA 90 bp GCCTGGGTCTGTACATCGGGGACACGGACTCGGGATTTTTCTCACTaGCAAGATAGATTAGCAATTAAGCATTTCATGTATGAGTGTTAT +
Preference number: 1 (lower is better)
Translates to: AWVCTSGTRTRDFSH*QDRLAIKHFMYECY
Trigger: ATAACACTCATACATGAAATGCTTAATTGCTAATCTATCTTGCCAGTGAGAAAAATCCCGAGTCCGTGTCCCCGATGTACAGACCCAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR GCA 90 bp TGCTGCTTCCATCTCCTGATCTGTAAAGTGGGAAGTTTGTACATCTaGTTTATAGGGCTGTTGGGAAGACTCCACAAGATGAAAACATTG +
Preference number: 1 (lower is better)
Translates to: CCFHLLICKVGSLYI*FIGLLGRLHKMKTL
Trigger: CAATGTTTTCATCTTGTGGAGTCTTCCCAACAGCCCTATAAAGCAGATGTACAAACTTCCCACTTTACAGATCAGGAGATGGAAGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CCA 90 bp AATGGTGTGAAAAGGTATCCATTTATCAGCAAAGCTGCATGTGGCTaGCTGGCTGACTCCAAGCGTTTCGAATATAAAACTGGTTGTGAA +
Preference number: 1 (lower is better)
Translates to: NGVKRYPFISKAACG*LADSKRFEYKTGCE
Trigger: TTCACAACCAGTTTTATATTCGAAACGCTTGGAGTCAGCCAGCCAGCCACATGCAGCTTTGCTGATAAATGGATACCTTTTCACACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR CCA 90 bp GGGAAGACTCCACAAGATGAAAACATTGTTACTAACTATAGAGCCTaGCATAGAGTAGGTATTCCCATCTGCTGTTACTGCTGTCATTGT +
Preference number: 1 (lower is better)
Translates to: GKTPQDENIVTNYRA*HRVGIPICCYCCHC
Trigger: ACAATGACAGCAGTAACAGCAGATGGGAATACCTACTCTATGCCAGGCTCTATAGTTAGTAACAATGTTTTCATCTTGTGGAGTCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR TCA 90 bp ATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGCACGCAGTaGAACTTACTGACTGTATTACTTTCATCTCTCTGCCTAACTCAC +
Preference number: 1 (lower is better)
Translates to: IICPPTISNVSVCTQ*NLLTVLLSSLCLTH
Trigger: GTGAGTTAGGCAGAGAGATGAAAGTAATACAGTCAGTAAGTTTCACTGCGTGCACACTGACACGTTTGAGATTGTAGGAGGACATATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR CCA 90 bp TTTATGCAAATTCATTTGAAATACAAAGCTAAGTCTCTGGCTATGTaGAATGCAGGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTA +
Preference number: 1 (lower is better)
Translates to: FMQIHLKYKAKSLAM*NAGTVNPWNLSGLV
Trigger: TACCAAACCTGAAAGATTCCATGGATTTACGGTGCCTGCATTCCACATAGCCAGAGACTTAGCTTTGTATTTCAAATGAATTTGCATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR GCA 90 bp AACTTGATAGTAAAGTGGATTTCTCTAAGATGTTTCTTTACCTCCTaGCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTC +
Preference number: 1 (lower is better)
Translates to: NLIVKWISLRCFFTS*PQQCSSVTDIYVYF
Trigger: GAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCACTTTACTATCAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR CAA 90 bp TGGAACTTGATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTGCTaGAACTCTGATCCCCCAAGCCCCGGAGTGGGCCCACTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: WNLILGGPPGQGWSC*NSDPPSPGVGPLQV
Trigger: AACCTGCAGTGGGCCCACTCCGGGGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAAGTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CAA 90 bp GGACACAGCTCCTGGGCGGAGGGGAAGGGCTACGCAGGCCATCTGTaGAGGGTGACACTGAGAGAGGCTTCCGGCTGGGTTCCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: GHSSWAEGKGYAGHL*RVTLREASGWVPWE
Trigger: TTCCCAGGGAACCCAGCCGGAAGCCTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTAGCCCTTCCCCTCCGCCCAGGAGCTGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp AGGTGGAACTTGATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTGCTTGAACAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: RWNLILGGPPGQGWSCLNRPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...GTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAAGTTCCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR GCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTTGGCAGCAAGGGGCCTaGTGGGATGTTTCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGWQQGA*WDVSGG
Trigger: CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCA...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGRPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CAA 90 bp TGTCTGGAGGGTCCCAGTCATGCTTTAGTGTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTGGGGGAGGCACTGGGGAGGGCACCT +
Preference number: 2 (lower is better)
Translates to: CLEGPSHALVLKTDL*VVVGRVGEALGRAP
Trigger: AGGTGCCCTCCCCAGTGCCTCCCCCACACGTCCCACCACGACCAAGAGATCAGTCTTCAACACTAAAGCATGACTGGGACCCTCCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCCCCAAGGCTCCCAGTaGCAGGCAGACCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSPQGSQ*QADPPA
Trigger: AGCAGGAGGGTCTGCCTGCCACTGGGAGCCTTGGGG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp GTCACCGGCCATGCTTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATGGAAGAGAGGCTTCCGGCTaGGTTCCCTGGGAACAGGTG +
Preference number: 2 (lower is better)
Translates to: VTGHACRAAGSFQASVYGREASG*VPWEQV
Trigger: CACCTGTTCCCAGGGAACCCAGCCGGAAGCCTCTCT...TCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSRPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp AAGTTGTACTTGGCTATGGCTTCTCCAATCTCTCCGGGCTGGACTGGGGGTGGTTCCGGCTGGGTTCCCTaGGAACAGGTGTCGGAGTTG +
Preference number: 2 (lower is better)
Translates to: KLYLAMASPISPGWTGGGSGWVP*EQVSEL
Trigger: CAACTCCGACACCTGTTCCCAGGGAACCCAGCCGGA...ACCACCCCCAGTCCAGCCCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRRPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGTGGCGATTCAGTCATaGCACCAGACAGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGVAIQS*HQTVSW
Trigger: CCAGGAGACTGTCTGGTGTCATGACTGAATCGCCAC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CAA 90 bp TGGTGTCCACCTTTCTGTCTGGAGGGTCCCAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTCGTGGTGGGACGTGTGGGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: WCPPFCLEGPSHALV*KTDLLVVVGRVGEA
Trigger: TGCCTCCCCCACACGTCCCACCACGACCAAGAGATCAGTCTTCAACACTAAAGCATGACTGGGACCCTCCAGACAGAAAGGTGGACACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGTCACACTCGTCCCAGTaGACTTTCCAAACGCTCCTG +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGSHSSQ*TFQTLL
Trigger: CAGGAGCGTTTGGAAAGTTCACTGGGACGAGTGTGA...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp AGTGGGCCCACTGCAGGTTCGCTCTTCCTCCGTTTCCTAAAGTCACCGGCCATGATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: SGPTAGSLFLRFLKSPAMIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...CATGGCCGGTGACTTTAGGAAACGGAGGAAGAGCGAACCTGCAGTGGGCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTGGCAGCAAGGGGCCTaGTGGGATGTTTCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIWQQGA*WDVSGG
Trigger: CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATGGCAGCAAGGGGCCTaGTGGGATGTTTCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRWQQGA*WDVSGG
Trigger: CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 2 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFRPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACTGCTGGTGATTTGGTaGCTGGCGGCAGGTGGAGAT +
Preference number: 2 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRLLVIW*LAAGGD
Trigger: ATCTCCACCTGCCGCCAGCCACCAAATCACCAGCAG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCTGCTGGTGATTTGGTaGCTGGCGGCAGGTGGAGAT +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAILLVIW*LAAGGD
Trigger: ATCTCCACCTGCCGCCAGCCACCAAATCACCAGCAG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCCCCAAGGCTCCCAGTaGCAGGCAGACCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFPQGSQ*QADPPA
Trigger: AGCAGGAGGGTCTGCCTGCCACTGGGAGCCTTGGGG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp CCTAAAGTCACCGGCCATGCTTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: PKVTGHACRAAGSFQASVIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...GACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACTTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp AGTGGGCCCACTGCAGGTTCGCTCTTCCTCCGTTTCCTAAAGTCACCGGCCATGCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: SGPTAGSLFLRFLKSPAMPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...CATGGCCGGTGACTTTAGGAAACGGAGGAAGAGCGAACCTGCAGTGGGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGTGGCGATTCAGTCATaGCACCAGACAGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIVAIQS*HQTVSW
Trigger: CCAGGAGACTGTCTGGTGTCATGACTGAATCGCCAC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCTCGTGAAAAGAAAATaGACTGCCAAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGLVKRK*TAKLRV
Trigger: CACCCTCAGCTTGGCAGTTCATTTTCTTTTCACGAG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AAGTTGTACTTGGCTATGGCTTCTCCAATCTCTCCGGGCTGGACTGGGGGTGGTAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: KLYLAMASPISPGWTGGGRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...ACCACCCCCAGTCCAGCCCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR GCA 90 bp TTCCACATTTGTGTCTGCATTGAAGTTGTACTTGGCTATGGCTTCTCCAATCTCCCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 2 (lower is better)
Translates to: FHICVCIEVVLGYGFSNLPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...GAGATTGGAGAAGCCATAGCCAAGTACAACTTCAATGCAGACACAAATGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCAAAACAAAACCTTCTaGCTTCCTGAGGACGGTACA +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGQNKTF*LPEDGT
Trigger: TGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTTG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGACAAAGCTAAGTCTCTaGCTATGTGGAATGCAGGCA +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGTKLSL*LCGMQA
Trigger: TGCCTGCATTCCACATAGCCAGAGACTTAGCTTTGT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AAGTACACCAAGCAAACATTTGCCTCTGCTCAATGGGATCGAGCACGCGCTAGCAGATTCAGGTTTGCTTaGGGACCCTGTGGCCTAGCA +
Preference number: 2 (lower is better)
Translates to: KYTKQTFASAQWDRARASRFRFA*GPCGLA
Trigger: TGCTAGGCCACAGGGTCCCCAAGCAAACCTGAATCT...GCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CAA 90 bp GGACTGATAGATGGAGACCTCGTTGGACACACCGGAAGAATGATCTaGAACATAATCCAGAGCCTTTTTAGGAGGCCGGGTGGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GLIDGDLVGHTGRMI*NIIQSLFRRPGGRE
Trigger: CTCTCTCCCACCCGGCCTCCTAAAAAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGTGTGTCCAACGAGGTCTCCATCTATCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVRPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp AAGTACACCAAGCAAACATTTGCCTCTGCTCAATGGGATCGAGCACGCGCTAGCCCATGTGGCATTTGGTaGATGCTGCTTCCATCTCCT +
Preference number: 2 (lower is better)
Translates to: KYTKQTFASAQWDRARASPCGIW*MLLPSP
Trigger: AGGAGATGGAAGCAGCATTCACCAAATGCCACATGG...GCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGTGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCAGCAAGGGGCCTGCTaGGATGTTTCAGGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFQQGAC*DVSGGL
Trigger: TAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCTGCTGGTGATTTGGTaGCTGGCGGCAGGTGGAGAT +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFLLVIW*LAAGGD
Trigger: ATCTCCACCTGCCGCCAGCCACCAAATCACCAGCAG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACCCCAAGGCTCCCAGTaGCAGGCAGACCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKPQGSQ*QADPPA
Trigger: AGCAGGAGGGTCTGCCTGCCACTGGGAGCCTTGGGG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR CAA 90 bp TACAGACCCGGCTTGTGTACCATGTGGATTTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTGTCGACAGTCGTCCTAATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: YRPGLCTMWICLNIV*YQSFGLSTVVLMAV
Trigger: CACAGCCATTAGGACGACTGTCGACAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCAAATCCACATGGTACACAAGCCGGGTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGTGGCGATTCAGTCATaGCACCAGACAGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFVAIQS*HQTVSW
Trigger: CCAGGAGACTGTCTGGTGTCATGACTGAATCGCCAC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCTTTCCAAACGCTCCTaGTTTGTAATAACTGTGCAT +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGLSKRS*FVITVH
Trigger: ATGCACAGTTATTACAAATCAGGAGCGTTTGGAAAG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGTATAAGATCAAGCATTaGCCATGGGAGAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGYKIKH*PWEKSH
Trigger: ATGGCTTTTCTCCCATGGGCAATGCTTGATCTTATA...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCCCCAAGGCTCCCAGTaGCAGGCAGACCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: KIRLNTYIFLSANGVRILPQGSQ*QADPPA
Trigger: AGCAGGAGGGTCTGCCTGCCACTGGGAGCCTTGGGG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCAAAGCTGCATGTGGCTaGCTGGCTGACTCCAAGCGT +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFKAACG*LADSKR
Trigger: ACGCTTGGAGTCAGCCAGCCAGCCACATGCAGCTTT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAACTGAGGACCATGGTGTaGCTTCTGGAGGTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKLRTMV*LLEVSF
Trigger: AAAGGACACCTCCAGAAGCCACACCATGGTCCTCAG...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
3UTR-3UTR CCA 90 bp GAGTTCCAGCTCATCTTCGTTCGGTTCTCCCCCACCTTGAATGTTTTCATGAGACTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 2 (lower is better)
Translates to: EFQLIFVRFSPTLNVFMRLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...TCTCATGAAAACATTCAAGGTGGGGGAGAACCGAACGAAGATGAGCTGGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: TIMFILIPYTGISKFRAERPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCGATCATGTTCATTTTaGTTCCTTACACAGGCATTT +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGRSCSF*FLTQAF
Trigger: AAATGCCTGTGTAAGGAATCAAAATGAACATGATCG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp CCGTTTCCTAAAGTCACCGGCCATGCTTGCAGAGCTGCTGGGTCTTTCCAGGCTCGATCATGTTCATTTTaGTTCCTTACACAGGCATTT +
Preference number: 2 (lower is better)
Translates to: PFPKVTGHACRAAGSFQARSCSF*FLTQAF
Trigger: AAATGCCTGTGTAAGGAATCAAAATGAACATGATCG...AGCCTGGAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACTTTAGGAAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTCACACTCGTCCCAGTaGACTTTCCAAACGCTCCTG +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFSHSSQ*TFQTLL
Trigger: CAGGAGCGTTTGGAAAGTTCACTGGGACGAGTGTGA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCATGTGGCTGGCTGGCTaGCTCCAAGCGTTTCGAATA +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFMWLAG*LQAFRI
Trigger: TATTCGAAACGCTTGGAGTCAGCCAGCCAGCCACAT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp AGTCCATTAAAGTGGTATCAATCAGGAAGCTTGAGGCTTGGTAACCTGAGAGGGGATGAGATTCAGGTTTaGTTGGGGACCCTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: SPLKWYQSGSLRLGNLRGDEIQV*LGTLWP
Trigger: AGGCCACAGGGTCCCCAAGCAAACCTGAATCTCATC...CCCTCTCAGGTTACCAAGCCTCAAGCTTCCTGATTGATACCACTTTAATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCCCCAAGGCTCCCAGTaGCAGGCAGACCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIPQGSQ*QADPPA
Trigger: AGCAGGAGGGTCTGCCTGCCACTGGGAGCCTTGGGG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCCCCAAGGCTCCCAGTaGCAGGCAGACCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVPQGSQ*QADPPA
Trigger: AGCAGGAGGGTCTGCCTGCCACTGGGAGCCTTGGGG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAAAACAAAACCTTCTaGCTTCCTGAGGACGGTACA +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIQNKTF*LPEDGT
Trigger: TGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTTG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTGGAGATGGTAATGGCTaGTTGGGAACCATAAGGCAT +
Preference number: 2 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFGDGNG*LGTIRH
Trigger: ATGCCTTATGGTTCCCAATCAGCCATTACCATCTCC...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAGACCCTCCTGCTGGTaGTTTGGTGGCTGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIRPSCW*FGGWRQ
Trigger: CTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAILSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGAAGTACCAAAGAATTTaGTTCTTCTTGAAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGKYQRI*FFLKFP
Trigger: TGGGAACTTCAAGAAGAACCAAATTCTTTGGTACTT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCGATCATGTTCATTTTaGTTCCTTACACAGGCATTT +
Preference number: 2 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSRSCSF*FLTQAF
Trigger: AAATGCCTGTGTAAGGAATCAAAATGAACATGATCG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCTCGTGAAAAGAAAATaGACTGCCAAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFLVKRK*TAKLRV
Trigger: CACCCTCAGCTTGGCAGTTCATTTTCTTTTCACGAG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAAGCGCCTTTTCAACCATaGAGAACCAAGACTTTTGGT +
Preference number: 2 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKAPFQP*RTKTFG
Trigger: ACCAAAAGTCTTGGTTCTTCATGGTTGAAAAGGCGC...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
3UTR-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTGGCAGCAAGGGGCCTaGTGGGATGTTTCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNWQQGA*WDVSGG
Trigger: CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTTGGCAGCAAGGGGCCTaGTGGGATGTTTCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIWQQGA*WDVSGG
Trigger: CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCA...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTATAAGATCAAGCATTaGCCATGGGAGAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIYKIKH*PWEKSH
Trigger: ATGGCTTTTCTCCCATGGGCAATGCTTGATCTTATA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACAGCAAGGGGCCTGCTaGGATGTTTCAGGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKQQGAC*DVSGGL
Trigger: TAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTAGCAAACCCACTCTTTCTCCTACAGTCTGAGCCTTCAAGGTGCTTAGCTGGCGTGATTGGAAGATCTTaGAACATGCTGCAGAACAGA +
Preference number: 2 (lower is better)
Translates to: LANPLFLLQSEPSRCLAGVIGRS*NMLQNR
Trigger: TCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC...GCCAGCTAAGCACCTTGAAGGCTCAGACTGTAGGAGAAAGAGTGGGTTTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGCTTGTTGTTCACAATaGCAATGGTTACGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIACCSQ*QWLRFS
Trigger: ACTAAAACGTAACCATTGGCATTGTGAACAACAAGC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTGTTTCTTTACCTCCTaGCCCCAACAATGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFCFFTS*PQQCSS
Trigger: AGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACAGCAAGGGGCCTGCTaGGATGTTTCAGGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: TIMFILIPYTGISKFRAEQQGAC*DVSGGL
Trigger: TAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCTGCTGGTGATTTGGTaGCTGGCGGCAGGTGGAGAT +
Preference number: 2 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVLLVIW*LAAGGD
Trigger: ATCTCCACCTGCCGCCAGCCACCAAATCACCAGCAG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCAAAACAAAACCTTCTaGCTTCCTGAGGACGGTACA +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFQNKTF*LPEDGT
Trigger: TGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTTG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCATTCCTGTCTGCAAATaGAGTCAGGATTCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFIPVCK*SQDSGS
Trigger: AGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCACAAAGCTAAGTCTCTaGCTATGTGGAATGCAGGCA +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFTKLSL*LCGMQA
Trigger: TGCCTGCATTCCACATAGCCAGAGACTTAGCTTTGT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR CAA 90 bp CAAAATACCTGGGTAAAAAGTCAGAAGACATGCAGTCATAAGGCCTaGAGATTCATGCACCATTATGTCCTCCCGGTTAGCAAACCCACT +
Preference number: 2 (lower is better)
Translates to: QNTWVKSQKTCSHKA*RFMHHYVLPVSKPT
Trigger: AGTGGGTTTGCTAACCGGGAGGACATAATGGTGCATGAATCTCAAGGCCTTATGACTGCATGTCTTCTGACTTTTTACCCAGGTATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGTGGCGATTCAGTCATaGCACCAGACAGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVVAIQS*HQTVSW
Trigger: CCAGGAGACTGTCTGGTGTCATGACTGAATCGCCAC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGTGGCGATTCAGTCATaGCACCAGACAGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNVAIQS*HQTVSW
Trigger: CCAGGAGACTGTCTGGTGTCATGACTGAATCGCCAC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATCACACTCGTCCCAGTaGACTTTCCAAACGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLSHSSQ*TFQTLL
Trigger: CAGGAGCGTTTGGAAAGTTCACTGGGACGAGTGTGA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ACCGAAGAGAACAAAGGGATGCTCTCAAAATACCTGGGTAAAAAGTCAGAAGACGCTGCTTCCATCTCCTaGTCTGTAAAGTGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: TEENKGMLSKYLGKKSEDAASIS*SVKWEV
Trigger: AACTTCCCACTTTACAGATCAGGAGATGGAAGCAGC...GTCTTCTGACTTTTTACCCAGGTATTTTGAGAGCATCCCTTTGTTCTCTTCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCAGCAAGGGGCCTGCTaGGATGTTTCAGGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVQQGAC*DVSGGL
Trigger: TAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTAGCAAACCCACTCTTTCTCCTACAGTCTGAGCCTTCAAGGTGCTTAGCTGGCTTAAACAACTTGTTATaGGAAGTGTGCTGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: LANPLFLLQSEPSRCLAGLNNLL*EVCWGK
Trigger: TTTTCCCCAGCACACTTCCCATAACAAGTTGTTTAA...GCCAGCTAAGCACCTTGAAGGCTCAGACTGTAGGAGAAAGAGTGGGTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp CAGCTCATCTTCGTTCGGTTCTCCCCCACCTTGAATGTTTTCATGAGAGAACCCTTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 2 (lower is better)
Translates to: QLIFVRFSPTLNVFMREPFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...GGGTTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCGAACGAAGATGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGGAGATGGTAATGGCTaGTTGGGAACCATAAGGCAT +
Preference number: 2 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKGDGNG*LGTIRH
Trigger: ATGCCTTATGGTTCCCAATCAGCCATTACCATCTCC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCAGCAAGGGGCCTGCTaGGATGTTTCAGGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCQQGAC*DVSGGL
Trigger: TAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAACAAAGCTAAGTCTCTaGCTATGTGGAATGCAGGCA +
Preference number: 2 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVTKLSL*LCGMQA
Trigger: TGCCTGCATTCCACATAGCCAGAGACTTAGCTTTGT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AGCATGCTAACAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTCTTTTCCAGCCAGAGTaGGGGAGAGGCACTTTCAGA +
Preference number: 2 (lower is better)
Translates to: SMLTKCGHPRHLFCNKNVLFQPE*GRGTFR
Trigger: TCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAG...AACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTGTTAGCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
3UTR CAA 90 bp ATCAAGTTCGGACATACAGAGGAGCTGCAGAGTTTTAAAGAGGTCTaGAGGACACTGATCTCTGAGAAAGAAACAAGGGAAGCAAATAAG +
Preference number: 2 (lower is better)
Translates to: IKFGHTEELQSFKEV*RTLISEKETREANK
Trigger: CTTATTTGCTTCCCTTGTTTCTTTCTCAGAGATCAGTGTCCTCAAGACCTCTTTAAAACTCTGCAGCTCCTCTGTATGTCCGAACTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR TCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAGGAGATGGTAATGGCTaGTTGGGAACCATAAGGCAT +
Preference number: 2 (lower is better)
Translates to: TIMFILIPYTGISKFRAEGDGNG*LGTIRH
Trigger: ATGCCTTATGGTTCCCAATCAGCCATTACCATCTCC...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCGATCATGTTCATTTTaGTTCCTTACACAGGCATTT +
Preference number: 2 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFRSCSF*FLTQAF
Trigger: AAATGCCTGTGTAAGGAATCAAAATGAACATGATCG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACTCGTGAAAAGAAAATaGACTGCCAAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLLVKRK*TAKLRV
Trigger: CACCCTCAGCTTGGCAGTTCATTTTCTTTTCACGAG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCTCGTGAAAAGAAAATaGACTGCCAAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: KIRLNTYIFLSANGVRILLVKRK*TAKLRV
Trigger: CACCCTCAGCTTGGCAGTTCATTTTCTTTTCACGAG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCTCGTGAAAAGAAAATaGACTGCCAAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTLVKRK*TAKLRV
Trigger: CACCCTCAGCTTGGCAGTTCATTTTCTTTTCACGAG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTTCACACTCGTCCCAGTaGACTTTCCAAACGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISSHSSQ*TFQTLL
Trigger: CAGGAGCGTTTGGAAAGTTCACTGGGACGAGTGTGA...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TTCCACATTTGTGTCTGCATTGAAGTTGTACTTGGCTATGGCTTCTCCAATCTCTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: FHICVCIEVVLGYGFSNLFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...GAGATTGGAGAAGCCATAGCCAAGTACAACTTCAATGCAGACACAAATGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGGAGATGGTAATGGCTaGTTGGGAACCATAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNGDGNG*LGTIRH
Trigger: ATGCCTTATGGTTCCCAATCAGCCATTACCATCTCC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCTCGTGAAAAGAAAATaGACTGCCAAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVLVKRK*TAKLRV
Trigger: CACCCTCAGCTTGGCAGTTCATTTTCTTTTCACGAG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAATTCCTGTCTGCAAATaGAGTCAGGATTCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLIPVCK*SQDSGS
Trigger: AGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGACAAAGCTAAGTCTCTaGCTATGTGGAATGCAGGCA +
Preference number: 2 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTTKLSL*LCGMQA
Trigger: TGCCTGCATTCCACATAGCCAGAGACTTAGCTTTGT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp CCCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCACAATGTCAAATAAATaGGATGAGATTCAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: PSFSVSLWQPYHATKSEFTMSNK*DEIQVC
Trigger: GCAAACCTGAATCTCATCCCATTTATTTGACATTGT...GAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp ACTCTCTCCTATCATTTGCTCTGGCTCCCAACAAAATGGTTCAGGAAGGATAAATTATGGGAAGTGTGCTaGGGAAAATTTCTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: TLSYHLLWLPTKWFRKDKLWEVC*GKFLLW
Trigger: CCAAAGAAGAAATTTTCCCCAGCACACTTCCCATAA...TTTATCCTTCCTGAACCATTTTGTTGGGAGCCAGAGCAAATGATAGGAGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp CAAACATCCTTCCCAACTAGATCTTTCCCAACTAGCTCTTTGGTTTGTTTGCGTATTCATCTTTTCCTGTaGCTGAAGAGGTTTACCCAT +
Preference number: 2 (lower is better)
Translates to: QTSFPTRSFPTSSLVCLRIHLFL*LKRFTH
Trigger: ATGGGTAAACCTCTTCAGCCACAGGAAAAGATGAAT...ACGCAAACAAACCAAAGAGCTAGTTGGGAAAGATCTAGTTGGGAAGGATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTTTCACCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNFHLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGGTGAAA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR TCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGGAGATGGTAATGGCTaGTTGGGAACCATAAGGCAT +
Preference number: 2 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQGDGNG*LGTIRH
Trigger: ATGCCTTATGGTTCCCAATCAGCCATTACCATCTCC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCTCGTGAAAAGAAAATaGACTGCCAAGCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQLVKRK*TAKLRV
Trigger: CACCCTCAGCTTGGCAGTTCATTTTCTTTTCACGAG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCAAAACAAAACCTTCTaGCTTCCTGAGGACGGTACA +
Preference number: 2 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIQNKTF*LPEDGT
Trigger: TGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTTG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCTTTCCAAACGCTCCTaGTTTGTAATAACTGTGCAT +
Preference number: 2 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTLSKRS*FVITVH
Trigger: ATGCACAGTTATTACAAATCAGGAGCGTTTGGAAAG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCTTTCCAAACGCTCCTaGTTTGTAATAACTGTGCAT +
Preference number: 2 (lower is better)
Translates to: KIRLNTYIFLSANGVRILLSKRS*FVITVH
Trigger: ATGCACAGTTATTACAAATCAGGAGCGTTTGGAAAG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGCTTGTTGTTCACAATaGCAATGGTTACGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKACCSQ*QWLRFS
Trigger: ACTAAAACGTAACCATTGGCATTGTGAACAACAAGC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATATAAGATCAAGCATTaGCCATGGGAGAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLYKIKH*PWEKSH
Trigger: ATGGCTTTTCTCCCATGGGCAATGCTTGATCTTATA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp ACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGTGTAGTGTTGTGAACCAAGACTTTTGGTaGAGAAAACACCAGTTCTGT +
Preference number: 2 (lower is better)
Translates to: TLDIYFVTRMLQTGCSVVNQDFW*RKHQFC
Trigger: ACAGAACTGGTGTTTTCTGCACCAAAAGTCTTGGTT...CACAACACTACACCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
3UTR-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCAAAACAAAACCTTCTaGCTTCCTGAGGACGGTACA +
Preference number: 2 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQQNKTF*LPEDGT
Trigger: TGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTTG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGGCACCGTAAATCCATaGAATCTTTCAGGTTTGGTA +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNGTVNP*NLSGLV
Trigger: TACCAAACCTGAAAGATTCCATGGATTTACGGTGCC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAATCAAGCATTGCCCATaGGAGAAAAGCCATAAAAAG +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLIKHCP*EKSHKK
Trigger: CTTTTTATGGCTTTTCTCCCATGGGCAATGCTTGAT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp ACCGAAGAGAACAAAGGGATGCTCTCAAAATACCTGGGTAAAAAGTCAGAAGACTATTCCATTGAATTTTaGTTCGGCAGTTTCACTTTC +
Preference number: 2 (lower is better)
Translates to: TEENKGMLSKYLGKKSEDYSIEF*FGSFTF
Trigger: GAAAGTGAAACTGCCGAACCAAAATTCAATGGAATA...GTCTTCTGACTTTTTACCCAGGTATTTTGAGAGCATCCCTTTGTTCTCTTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp CAAACATCCTTCCCAACTAGATCTTTCCCAACTAGCTCTTTGGTTTGTTTGCGTCAACCAAGTACATTATaGAGAGTACTAGTAGCTAAA +
Preference number: 2 (lower is better)
Translates to: QTSFPTRSFPTSSLVCLRQPSTL*RVLVAK
Trigger: TTTAGCTACTAGTACTCTCCATAATGTACTTGGTTG...ACGCAAACAAACCAAAGAGCTAGTTGGGAAAGATCTAGTTGGGAAGGATGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR TCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACGATCATGTTCATTTTaGTTCCTTACACAGGCATTT +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLRSCSF*FLTQAF
Trigger: AAATGCCTGTGTAAGGAATCAAAATGAACATGATCG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCTTTCCAAACGCTCCTaGTTTGTAATAACTGTGCAT +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNLSKRS*FVITVH
Trigger: ATGCACAGTTATTACAAATCAGGAGCGTTTGGAAAG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAGCTTGTTGTTCACAATaGCAATGGTTACGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLACCSQ*QWLRFS
Trigger: ACTAAAACGTAACCATTGGCATTGTGAACAACAAGC...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGGCTTGTTGTTCACAATaGCAATGGTTACGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: KIRLNTYIFLSANGVRILACCSQ*QWLRFS
Trigger: ACTAAAACGTAACCATTGGCATTGTGAACAACAAGC...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTATAAGATCAAGCATTaGCCATGGGAGAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNYKIKH*PWEKSH
Trigger: ATGGCTTTTCTCCCATGGGCAATGCTTGATCTTATA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp CTTTGTCTATCATTTTCAAAAATTAGAACCGAAGAGAACAAAGGGATGCTCTCAGACATACAGAGGAGCTaGAGAGTTTTAAAGAGGTCT +
Preference number: 2 (lower is better)
Translates to: LCLSFSKIRTEENKGMLSDIQRS*RVLKRS
Trigger: AGACCTCTTTAAAACTCTGCAGCTCCTCTGTATGTC...TGAGAGCATCCCTTTGTTCTCTTCGGTTCTAATTTTTGAAAATGATAGACAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTGGCACCGTAAATCCATaGAATCTTTCAGGTTTGGTA +
Preference number: 2 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISGTVNP*NLSGLV
Trigger: TACCAAACCTGAAAGATTCCATGGATTTACGGTGCC...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACATCAAGCATTGCCCATaGGAGAAAAGCCATAAAAAG +
Preference number: 2 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNIKHCP*EKSHKK
Trigger: CTTTTTATGGCTTTTCTCCCATGGGCAATGCTTGAT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCGCAACAGGTTTTATCTaGAATCAAGTTCGGACATAC +
Preference number: 2 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFATGFI*NQVRTY
Trigger: GTATGTCCGAACTTGATTCCAGATAAAACCTGTTGC...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
3UTR CAA 90 bp TTCCCAACTAGATCTTTCCCAACTAGCTCTTTGGTTTGTTTGCGTTaGTTTGTTTGTTTTGTTCCAATCCAAAGAGGTATAAATTCAGGA +
Preference number: 2 (lower is better)
Translates to: FPTRSFPTSSLVCLR*FVCFVPIQRGINSG
Trigger: TCCTGAATTTATACCTCTTTGGATTGGAACAAAACAAACAAACAAACGCAAACAAACCAAAGAGCTAGTTGGGAAAGATCTAGTTGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR TCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCTTTCCAAACGCTCCTaGTTTGTAATAACTGTGCAT +
Preference number: 2 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCLSKRS*FVITVH
Trigger: ATGCACAGTTATTACAAATCAGGAGCGTTTGGAAAG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGCTTGTTGTTCACAATaGCAATGGTTACGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVACCSQ*QWLRFS
Trigger: ACTAAAACGTAACCATTGGCATTGTGAACAACAAGC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAATATATATTCCTGTCTaGAAATGGAGTCAGGATTCT +
Preference number: 2 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLIYIPV*KWSQDS
Trigger: AGAATCCTGACTCCATTTGCAGACAGGAATATATAT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTATCAAGCATTGCCCATaGGAGAAAAGCCATAAAAAG +
Preference number: 2 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISIKHCP*EKSHKK
Trigger: CTTTTTATGGCTTTTCTCCCATGGGCAATGCTTGAT...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR CAA 90 bp CTGAAACAAGATACACAAGACATGGCTAAAAATAAACAACATTTCTaGACAATGTCAAATAAATGGGATGAGATTCAGGTTTGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: LKQDTQDMAKNKQHF*TMSNKWDEIQVCLG
Trigger: CCCCAAGCAAACCTGAATCTCATCCCATTTATTTGACATTGTCAAGAAATGTTGTTTATTTTTAGCCATGTCTTGTGTATCTTGTTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR TCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCGATCATGTTCATTTTaGTTCCTTACACAGGCATTT +
Preference number: 2 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCRSCSF*FLTQAF
Trigger: AAATGCCTGTGTAAGGAATCAAAATGAACATGATCG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTATATATATTCCTGTCTaGAAATGGAGTCAGGATTCT +
Preference number: 2 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVIYIPV*KWSQDS
Trigger: AGAATCCTGACTCCATTTGCAGACAGGAATATATAT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR GCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTATATATATTCCTGTCTaGAAATGGAGTCAGGATTCT +
Preference number: 2 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISIYIPV*KWSQDS
Trigger: AGAATCCTGACTCCATTTGCAGACAGGAATATATAT...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR TCA 72 bp TCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCCCCGGAGTGGGCCCAC +
Preference number: 3 (lower is better)
Translates to: SWEVRPARAGPA*TLIPQAPEWAH
Trigger: GTGGGCCCACTCCGGGGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR GCA 72 bp TTGATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTaGTTGAACTCTGATCCCCCAAGCCCCGGAGTGGGC +
Preference number: 3 (lower is better)
Translates to: LILGGPPGQGWS*LNSDPPSPGVG
Trigger: GCCCACTCCGGGGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp TGGAACTTGATCCTGGGAGGTCCGCCCGGCCAGGGCTaGTCCTGCTTGAACTCTGATCCCCCAAGCCCCGGA +
Preference number: 3 (lower is better)
Translates to: WNLILGGPPGQG*SCLNSDPPSPG
Trigger: TCCGGGGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAAGTTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCCTCCTGCTGGTGATTaGGTGGCTGGCGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSPPAGD*VAGGRW
Trigger: CCACCTGCCGCCAGCCACCAAATCACCAGCAGGAGG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CCA 72 bp CTTGGCTATGGCTTCTCCAATCTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGGCTGCGCTTTTTCCGG +
Preference number: 3 (lower is better)
Translates to: LGYGFSNLSGLD*GWWSCGLRFFR
Trigger: CCGGAAAAAGCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGGAGAAGCCATAGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp ATCTCTTGGTCGTGGTGGGACGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAACGCATCGGTGCCATT +
Preference number: 3 (lower is better)
Translates to: ISWSWWDVWGRH*GGHLLKRIGAI
Trigger: AATGGCACCGATGCGTTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACACGTCCCACCACGACCAAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp AGGTGGAACTTGATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTGCTTGAACTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 3 (lower is better)
Translates to: RWNLILGGPPGQGWSCLNLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...GTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAAGTTCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCCTCCTGCTGGTGATTaGGTGGCTGGCGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSPPAGD*VAGGRW
Trigger: CCACCTGCCGCCAGCCACCAAATCACCAGCAGGAGG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR GCA 72 bp GGGCAGAGGAGGGTCTGGGTAGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTCGACATAGGACACGGG +
Preference number: 3 (lower is better)
Translates to: GQRRVWVVLSTF*VPLDNLDIGHG
Trigger: CCCGTGTCCTATGTCGAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp CCCTCTTCTCTTCCTCGGAGGATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCATCCAGGGACTGGGCAT +
Preference number: 3 (lower is better)
Translates to: PSSLPRRIYRAG*SFPWCHPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCATCCCGCTCTATAGATCCTCCGAGGAAGAGAAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp TGTGGGGATTCCAGACTCATCCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGATGACCGTGACCCTCTT +
Preference number: 3 (lower is better)
Translates to: CGDSRLIHRADP*VMRGFDDRDPL
Trigger: AAGAGGGTCACGGTCATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTGGATGAGTCTGGAATCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp TTGTACTTGGCTATGGCTTCTCCAATCTCTCCGGGCTaGACTGGGGGTGGTGGTCTTGCGGGCTGCGCTTTT +
Preference number: 3 (lower is better)
Translates to: LYLAMASPISPG*TGGGGLAGCAF
Trigger: AAAAGCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGGAGAAGCCATAGCCAAGTACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR GCA 72 bp GGTCAAGGCCGTCCAACTCATTCTCAGGGCCGACTTTaGAGTCGCTGCACTAGTGTGATGCTGACGTGTGAG +
Preference number: 3 (lower is better)
Translates to: GQGRPTHSQGRL*SRCTSVMLTCE
Trigger: CTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGTTGGACGGCCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
3UTR TCA 72 bp AGAAGAGCTAATGAAAGACTTCGTAAAGGTGGAACTTaGTCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCT +
Preference number: 3 (lower is better)
Translates to: RRANERLRKGGT*SWEVRPARAGP
Trigger: AGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAAGTTCCACCTTTACGAAGTCTTTCATTAGCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCCTCCTGCTGGTGATTaGGTGGCTGGCGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFPPAGD*VAGGRW
Trigger: CCACCTGCCGCCAGCCACCAAATCACCAGCAGGAGG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR TCA 72 bp GACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCATaGCACCAGACAGTCTCCTGGAGAGTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: DGTPSREVAIQS*HQTVSWRVSLS
Trigger: AGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTCTGGAAGGTGTACCGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CCA 72 bp GGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTaGGTTAATGCAGATGTGTGGCTGAAATGTGGCATA +
Preference number: 3 (lower is better)
Translates to: GMAARGLLGCFR*VNADVWLKCGI
Trigger: TATGCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CCA 72 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTaGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGC +
Preference number: 3 (lower is better)
Translates to: IGNHKAWQQGAC*DVSGGLMQMCG
Trigger: GCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CCA 72 bp CAGAAGTACACCAAGCAAACATTTGCCTCTGCTCAATaGGATCGAGCACGCGCTAGCTACGTGGCCATGTGG +
Preference number: 3 (lower is better)
Translates to: QKYTKQTFASAQ*DRARASYVAMW
Trigger: CCACATGGCCACGTAGCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGTGTACTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR TCA 72 bp GGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTaGGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: GQKAGNCIFMKA*ACVSLRLPASP
Trigger: TGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR TCA 72 bp ACCCATAGCAGAATCTCTGCCCACGCCCATGGCTTCTaGCCTCTCGGTCCTCTGAGACTAGTCAAGAATACT +
Preference number: 3 (lower is better)
Translates to: THSRISAHAHGF*PLGPLRLVKNT
Trigger: AGTATTCTTGACTAGTCTCAGAGGACCGAGAGGTCAGAAGCCATGGGCGTGGGCAGAGATTCTGCTATGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR TCA 72 bp CTCCCGGTTAGCAAACCCACTCTTTCTCCTACAGTCTaGGCCTTCAAGGTGCTTAGCTGGCCTCAAACATCC +
Preference number: 3 (lower is better)
Translates to: LPVSKPTLSPTV*AFKVLSWPQTS
Trigger: GGATGTTTGAGGCCAGCTAAGCACCTTGAAGGCTCAGACTGTAGGAGAAAGAGTGGGTTTGCTAACCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR TCA 72 bp GGAGGGCACCTCCTTAAACGCATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGGTCTGTAGGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: GGHLLKRIGAIV*VAFRKRSVGLS
Trigger: ACTCAGACCTACAGACCTCTTTCGAAAAGCCACTCAGACAATGGCACCGATGCGTTTAAGGAGGTGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR GCA 72 bp CTGATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTaGTGGGATGTTTCAGGTGGGTTAATGCAGATGTGT +
Preference number: 3 (lower is better)
Translates to: LIGNHKAWQQGA*WDVSGGLMQMC
Trigger: ACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
3UTR CCA 72 bp TTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGACCTCGTTGGACACAC +
Preference number: 3 (lower is better)
Translates to: LQSCWVFPGFCL*RTDRWRPRWTH
Trigger: GTGTGTCCAACGAGGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp GTGGCTTATTGGAGCTTAGGGTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAGGAGGGTCTGGGTAGT +
Preference number: 3 (lower is better)
Translates to: VAYWSLGCKFCH*SSCGAEEGLGS
Trigger: ACTACCCAGACCCTCCTCTGCCCCACAGCTACTCCAGTGACAGAATTTACACCCTAAGCTCCAATAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp ACCAAGCAAACATTTGCCTCTGCTCAATGGGATCGAGCACGCGCTAGCTACGTGTGCTTTATAGGGCTGTaGGGAAGACTCCACAAGATG +
Preference number: 3 (lower is better)
Translates to: TKQTFASAQWDRARASYVCFIGL*GRLHKM
Trigger: CATCTTGTGGAGTCTTCCCAACAGCCCTATAAAGCA...CACGTAGCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CAA 90 bp GAGTTCCAGCTCATCTTCGTTCGGTTCTCCCCCACCTTGAATGTTTTCATGAGATCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 3 (lower is better)
Translates to: EFQLIFVRFSPTLNVFMRSCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...TCTCATGAAAACATTCAAGGTGGGGGAGAACCGAACGAAGATGAGCTGGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp GAGTTCCAGCTCATCTTCGTTCGGTTCTCCCCCACCTTGAATGTTTTCATGAGATACGCAGGCCATCTGTaGAGGGTGACACTGAGAGAG +
Preference number: 3 (lower is better)
Translates to: EFQLIFVRFSPTLNVFMRYAGHL*RVTLRE
Trigger: CTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTA...TCTCATGAAAACATTCAAGGTGGGGGAGAACCGAACGAAGATGAGCTGGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR TCA 72 bp TGCAGAACAGAGCCGCAAACACAGGGTTCCCTACTCTaGATCAATGTTACTCGTGGTCAAGGCCGTCCAACT +
Preference number: 3 (lower is better)
Translates to: CRTEPQTQGSLL*INVTRGQGRPT
Trigger: AGTTGGACGGCCTTGACCACGAGTAACATTGATTCAGAGTAGGGAACCCTGTGTTTGCGGCTCTGTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
3UTR-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCCTCCTGCTGGTGATTaGGTGGCTGGCGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTPPAGD*VAGGRW
Trigger: CCACCTGCCGCCAGCCACCAAATCACCAGCAGGAGG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCCTCCTGCTGGTGATTaGGTGGCTGGCGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVPPAGD*VAGGRW
Trigger: CCACCTGCCGCCAGCCACCAAATCACCAGCAGGAGG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR-3UTR CAA 90 bp AAGTACACCAAGCAAACATTTGCCTCTGCTCAATGGGATCGAGCACGCGCTAGCTATCAATCAGGAAGCTaGAGGCTTGGTAACCTGAGA +
Preference number: 3 (lower is better)
Translates to: KYTKQTFASAQWDRARASYQSGS*RLGNLR
Trigger: TCTCAGGTTACCAAGCCTCAAGCTTCCTGATTGATA...GCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGTGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR TCA 72 bp AGTTACCAGTTCCTCCCATTCATCTTTTCCTGTGGCTaGAGAGGTTTACCCATAGCAGAATCTCTGCCCACG +
Preference number: 3 (lower is better)
Translates to: SYQFLPFIFSCG*RGLPIAESLPT
Trigger: CGTGGGCAGAGATTCTGCTATGGGTAAACCTCTTCAGCCACAGGAAAAGATGAATGGGAGGAACTGGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CCA 72 bp GAAGGAAGGCAGTTGAACTATGTGATTGGAAGATCTTaGAACATGCTGCAGAACAGAGCCGCAAACACAGGG +
Preference number: 3 (lower is better)
Translates to: EGRQLNYVIGRS*NMLQNRAANTG
Trigger: CCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
3UTR-3UTR CAA 90 bp GAGTTCCAGCTCATCTTCGTTCGGTTCTCCCCCACCTTGAATGTTTTCATGAGAGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 3 (lower is better)
Translates to: EFQLIFVRFSPTLNVFMRALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...TCTCATGAAAACATTCAAGGTGGGGGAGAACCGAACGAAGATGAGCTGGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp TGTTTTCATGAGAGAACCCAGGACGCTGTGGCTTATTaGAGCTTAGGGTGTAAATTCTGTCACTGGAGTAGC +
Preference number: 3 (lower is better)
Translates to: CFHERTQDAVAY*SLGCKFCHWSS
Trigger: GCTACTCCAGTGACAGAATTTACACCCTAAGCTCCAATAAGCCACAGCGTCCTGGGTTCTCTCATGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 3 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp CAGCTCATCTTCGTTCGGTTCTCCCCCACCTTGAATGTTTTCATGAGAGAACCCACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 3 (lower is better)
Translates to: QLIFVRFSPTLNVFMREPTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...GGGTTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCGAACGAAGATGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR TCA 72 bp ACCGAGACAAAGGACAACTGTGGACCGGAAGAGCCGTaGCATTTCTCCTTGTCAATAGGAATGTTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: TETKDNCGPEEP*HFSLSIGMLSS
Trigger: TGAACTTAACATTCCTATTGACAAGGAGAAATGTCACGGCTCTTCCGGTCCACAGTTGTCCTTTGTCTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR GCA 72 bp TTGACAATGTCAAATAAATGGGATGAGATTCAGGTTTaGTTGGGGACCCTGTGGCCTAGCAAGCTGGCTTTT +
Preference number: 3 (lower is better)
Translates to: LTMSNKWDEIQV*LGTLWPSKLAF
Trigger: AAAAGCCAGCTTGCTAGGCCACAGGGTCCCCAAGCAAACCTGAATCTCATCCCATTTATTTGACATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR GCA 72 bp GTTACTAGTGGTTTAAAACAGAGAACCTTCCAAGCTTaGGCCCAAAGGCTCGTGAAAATATCAGCCACAACG +
Preference number: 3 (lower is better)
Translates to: VTSGLKQRTFQA*AQRLVKISATT
Trigger: CGTTGTGGCTGATATTTTCACGAGCCTTTGGGCGCAAGCTTGGAAGGTTCTCTGTTTTAAACCACTAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CCA 72 bp GGTATCCATTTATCAGCAAAGCTGCATGTGGCTGGCTaGCTGACTCCAAGCGTTTCGAATATAAAACTGGTT +
Preference number: 3 (lower is better)
Translates to: GIHLSAKLHVAG*LTPSVSNIKLV
Trigger: AACCAGTTTTATATTCGAAACGCTTGGAGTCAGCCAGCCAGCCACATGCAGCTTTGCTGATAAATGGATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR-3UTR CAA 90 bp AGCATGCTAACAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACTAGTGAGCAGAGCTaGGGCAGAGTGCTGAGGTGT +
Preference number: 3 (lower is better)
Translates to: SMLTKCGHPRHLFCNKNVTSEQS*GRVLRC
Trigger: ACACCTCAGCACTCTGCCCAAGCTCTGCTCACTAGT...AACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTGTTAGCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
3UTR TCA 72 bp CCTCCTACAATCTCAAACGTGTCAGTGTGCACGCAGTaGAACTTACTGACTGTATTACTTTCATCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: PPTISNVSVCTQ*NLLTVLLSSLC
Trigger: GCAGAGAGATGAAAGTAATACAGTCAGTAAGTTTCACTGCGTGCACACTGACACGTTTGAGATTGTAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR TCA 72 bp GCCATGTGGCATTTGGTGAATGCTGCTTCCATCTCCTaGTCTGTAAAGTGGGAAGTTTGTACATCTGCTTTA +
Preference number: 3 (lower is better)
Translates to: AMWHLVNAASIS*SVKWEVCTSAL
Trigger: TAAAGCAGATGTACAAACTTCCCACTTTACAGATCAGGAGATGGAAGCAGCATTCACCAAATGCCACATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR GCA 72 bp CATCTCCTGATCTGTAAAGTGGGAAGTTTGTACATCTaGTTTATAGGGCTGTTGGGAAGACTCCACAAGATG +
Preference number: 3 (lower is better)
Translates to: HLLICKVGSLYI*FIGLLGRLHKM
Trigger: CATCTTGTGGAGTCTTCCCAACAGCCCTATAAAGCAGATGTACAAACTTCCCACTTTACAGATCAGGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CCA 72 bp GAACCGAAGAGAACAAAGGGATGCTCTCAAAATACCTaGGTAAAAAGTCAGAAGACATGCAGTCATAAGGCC +
Preference number: 3 (lower is better)
Translates to: EPKRTKGCSQNT*VKSQKTCSHKA
Trigger: GGCCTTATGACTGCATGTCTTCTGACTTTTTACCCAGGTATTTTGAGAGCATCCCTTTGTTCTCTTCGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CAA 90 bp GCCTTGTCTGTTGGTTCCTGGGATTTTACCTTCGTACCAGTTTTGGTCAACTCTAATCATAGACAGCTTTaGCAGGCAATTTCACCTCTT +
Preference number: 3 (lower is better)
Translates to: ALSVGSWDFTFVPVLVNSNHRQL*QAISPL
Trigger: AAGAGGTGAAATTGCCTGCAAAAGCTGTCTATGATT...AGAGTTGACCAAAACTGGTACGAAGGTAAAATCCCAGGAACCAACAGACAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 3 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CCA 72 bp AAAAGGTATCCATTTATCAGCAAAGCTGCATGTGGCTaGCTGGCTGACTCCAAGCGTTTCGAATATAAAACT +
Preference number: 3 (lower is better)
Translates to: KRYPFISKAACG*LADSKRFEYKT
Trigger: AGTTTTATATTCGAAACGCTTGGAGTCAGCCAGCCAGCCACATGCAGCTTTGCTGATAAATGGATACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR CCA 72 bp ACTCTCTCCTATCATTTGCTCTGGCTCCCAACAAAATaGTTCAGGAAGGATAAAAATGTATGCCTGTGTTCT +
Preference number: 3 (lower is better)
Translates to: TLSYHLLWLPTK*FRKDKNVCLCS
Trigger: AGAACACAGGCATACATTTTTATCCTTCCTGAACCATTTTGTTGGGAGCCAGAGCAAATGATAGGAGAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CAA 90 bp CAAACATCCTTCCCAACTAGATCTTTCCCAACTAGCTCTTTGGTTTGTTTGCGTAACCAATTAAACAACTaGTTATGGGAAGTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: QTSFPTRSFPTSSLVCLRNQLNN*LWEVCW
Trigger: CCAGCACACTTCCCATAACAAGTTGTTTAATTGGTT...ACGCAAACAAACCAAAGAGCTAGTTGGGAAAGATCTAGTTGGGAAGGATGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR-3UTR CAA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCTGTGATTGGAAGATCTaGGAACATGCTGCAGAACAG +
Preference number: 3 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFCDWKI*EHAAEQ
Trigger: CTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACA...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
3UTR-3UTR CAA 90 bp CTTTGTCTATCATTTTCAAAAATTAGAACCGAAGAGAACAAAGGGATGCTCTCAACACCAAGCAAACATTaGCCTCTGCTCAATGGGATC +
Preference number: 3 (lower is better)
Translates to: LCLSFSKIRTEENKGMLSTPSKH*PLLNGI
Trigger: GATCCCATTGAGCAGAGGCAAATGTTTGCTTGGTGT...TGAGAGCATCCCTTTGTTCTCTTCGGTTCTAATTTTTGAAAATGATAGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CCA 72 bp TCTCTGGCTATGTGGAATGCAGGCACCGTAAATCCATaGAATCTTTCAGGTTTGGTATTATTTTGTAGATCT +
Preference number: 3 (lower is better)
Translates to: SLAMWNAGTVNP*NLSGLVLFCRS
Trigger: AGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCCTGCATTCCACATAGCCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR TCA 72 bp ATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTaGAGATACCACGAAGGGAGATCTGCTGAAAGAGTT +
Preference number: 3 (lower is better)
Translates to: MLSFRFTFTCDL*RYHEGRSAERV
Trigger: AACTCTTTCAGCAGATCTCCCTTCGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR GCA 72 bp GTAAAGTGGATTTCTCTAAGATGTTTCTTTACCTCCTaGCCCCAACAATGTTCCTCTGTAACTGACATTTAT +
Preference number: 3 (lower is better)
Translates to: VKWISLRCFFTS*PQQCSSVTDIY
Trigger: ATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCACTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR CCA 72 bp ATTCATTTGAAATACAAAGCTAAGTCTCTGGCTATGTaGAATGCAGGCACCGTAAATCCATGGAATCTTTCA +
Preference number: 3 (lower is better)
Translates to: IHLKYKAKSLAM*NAGTVNPWNLS
Trigger: TGAAAGATTCCATGGATTTACGGTGCCTGCATTCCACATAGCCAGAGACTTAGCTTTGTATTTCAAATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR CCA 72 bp GACTATAAAGAACAATACAATCTCAGTCCATTAAAGTaGTATCAATCAGGAAGCTTGAGGCTTGGTAACCTG +
Preference number: 3 (lower is better)
Translates to: DYKEQYNLSPLK*YQSGSLRLGNL
Trigger: CAGGTTACCAAGCCTCAAGCTTCCTGATTGATACCACTTTAATGGACTGAGATTGTATTGTTCTTTATAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR GCA 72 bp CAACTAGATCTTTCCCAACTAGCTCTTTGGTTTGTTTaGGTTTGTTTGTTTGTTTTGTTCCAATCCAAAGAG +
Preference number: 3 (lower is better)
Translates to: QLDLSQLALWFV*VCLFVLFQSKE
Trigger: CTCTTTGGATTGGAACAAAACAAACAAACAAACGCAAACAAACCAAAGAGCTAGTTGGGAAAGATCTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CCA 72 bp AATACACCACTAAGAGCTTGTTGTTCACAATGCCAATaGTTACGTTTTAGTACACAAAACAGCAATGCGAAT +
Preference number: 3 (lower is better)
Translates to: NTPLRACCSQCQ*LRFSTQNSNAN
Trigger: ATTCGCATTGCTGTTTTGTGTACTAAAACGTAACCATTGGCATTGTGAACAACAAGCTCTTAGTGGTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR CCA 72 bp AATCAGGCTCAACACATATATATTCCTGTCTGCAAATaGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATA +
Preference number: 3 (lower is better)
Translates to: NQAQHIYIPVCK*SQDSGSHRRKI
Trigger: TATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR CAA 72 bp ATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTGCTaGAACTCTGATCCCCCAAGCCCCGGAGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ILGGPPGQGWSC*NSDPPSPGVGP
Trigger: TGGGCCCACTCCGGGGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
3UTR CAA 72 bp TCCTGGGCGGAGGGGAAGGGCTACGCAGGCCATCTGTaGAGGGTGACACTGAGAGAGGCTTCCGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SWAEGKGYAGHL*RVTLREASGWV
Trigger: AACCCAGCCGGAAGCCTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTAGCCCTTCCCCTCCGCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTGGGACGCCCATGTCATaGGGCAGCTCTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGGTPMS*GSSLWS
Trigger: ACTCCAAAGAGAGCTGCCCCATGACATGGGCGTCCC...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SGGVLFTQHRQGSIGSEVGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...CACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTGGGCACCTCCTCGGTaGAAGACTGGCTCCATCCGT +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSWAPPR*KTGSIR
Trigger: ACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCCAATCTCTCCGGGCTaGACTGGGGGTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSPISPG*TGGGGL
Trigger: AAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTGCTACTCCAGATCTCTaGATTTTGCCGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGATPDL*ILPGHL
Trigger: CAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGC...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCCGCCCGGCCAGGGCTaGTCCTGCTTGAACTCTGAT +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGPPGQG*SCLNSD
Trigger: ATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCGGGGACACAGCTCCTaGGCGGAGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSRGHSS*AEGKGY
Trigger: GTAGCCCTTCCCCTCCGCCCAGGAGCTGTGTCCCCG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCGGGGACACAGCTCCTaGGCGGAGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGRGHSS*AEGKGY
Trigger: GTAGCCCTTCCCCTCCGCCCAGGAGCTGTGTCCCCG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR TCA 90 bp GTGTACGGGGCAAGGCTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCAAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VYGARLRTMVWLLEVSFSRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...TGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAGCCTTGCCCCGTACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR TCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTGGTACAGGGGACAATaGCTAGCACCATCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSWYRGQ*LAPSGG
Trigger: GCCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTCGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGRHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: QGRLCSRCTSVMLTCELEGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTGGGTGGAAAGGCTGGTaGATGGGGCTCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSGWKGW*MGLLLR
Trigger: TCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCC...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GTGTACGGGGCAAGGCTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCAGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VYGARLRTMVWLLEVSFSGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...TGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAGCCTTGCCCCGTACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QGRLCSRCTSVMLTCELEGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCAGGATGCTGTTGTCTaGCAAGCTTCCCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSQDAVV*QASPPL
Trigger: AAGCGGAGGGGAAGCTTGCCAGACAACAGCATCCTG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTAGTGGGTGGAAAGGCTaGTGCATGGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSSGWKG*CMGLLL
Trigger: CAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAILSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCCAATCTCTCCGGGCTaGACTGGGGGTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGPISPG*TGGGGL
Trigger: AAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGCKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGTCCGGCTGGGTTCCCTaGGAACAGGTGTCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGSGWVP*EQVSEL
Trigger: CAACTCCGACACCTGTTCCCAGGGAACCCAGCCGGA...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LRTMVWLLEVSFSLSTGRVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...CCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp TTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTTGTCTCTACCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: FHSAQAGVHRKRSALLSLPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...TAGAGACAAAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTATCTTGGAGGCTCAGTaGACTCCCATAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSILEAQ*TPIVLC
Trigger: GCACAGGACTATGGGAGTGCACTGAGCCTCCAAGAT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GTGTACGGGGCAAGGCTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: VYGARLRTMVWLLEVSFSHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...TGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAGCCTTGCCCCGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTTGGGGCAGCTCTCTTTaGAGTCTTCTTCACATAACA +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGWGSSL*SLLHIT
Trigger: TGTTATGTGAAGAAGACTCCAAAGAGAGCTGCCCCA...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGGGACGCCCATGTCATaGGGCAGCTCTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGGTPMS*GSSLWS
Trigger: ACTCCAAAGAGAGCTGCCCCATGACATGGGCGTCCC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTCCATTTCTTGCCTTCTaGGTCGGTCCATGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGPFLAF*VGPCFH
Trigger: ATGAAAACATGGACCGACCCAGAAGGCAAGAAATGG...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTCCTTTCAGGAATCTGTaGCAGCAGTTCACTGATAAG +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGPFRNL*QQFTDK
Trigger: CTTATCAGTGAACTGCTGCCACAGATTCCTGAAAGG...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCAATCTCTCCGGGCTaGACTGGGGGTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SGGVLFTQHRQGSIGSEVPISPG*TGGGGL
Trigger: AAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGG...CACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTCAATTTCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGQFLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGAAATTG...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTGAGAGCATGAAGAGATaGATTCCTTTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGESMKR*IPFRNL
Trigger: CAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTC...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CCAACTCATTCTCAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGACATGGCGGCACGTTTaGGAGCACACCCACCGCTAT +
Preference number: 4 (lower is better)
Translates to: PTHSQGRLCSRCTSVMLTTWRHV*EHTHRY
Trigger: ATAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGT...CGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTGCTACTCCAGATCTCTaGATTTTGCCGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSATPDL*ILPGHL
Trigger: CAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGC...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTCACTGATAAGCCTGTaGAGGATGCTGTTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSSLISL*RMLLSG
Trigger: GCCAGACAACAGCATCCTGCACAGGCTTATCAGTGA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTACTCCCATAGTCCTGTaGGTGGTAGTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSTPIVL*VVVAGC
Trigger: ACAACCAGCAACTACCACGCACAGGACTATGGGAGT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: LRTMVWLLEVSFSLSTGRVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...CCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACCAACATAGAAGTCAAGGGATGCATCTGCCTGGGTCTGTACATCGGGGACACGGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: TNIEVKGCICLGLYIGDTVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...CGTGTCCCCGATGTACAGACCCAGGCAGATGCATCCCTTGACTTCTATGTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCAGGATGCTGTTGTCTaGCAAGCTTCCCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGQDAVV*QASPPL
Trigger: AAGCGGAGGGGAAGCTTGCCAGACAACAGCATCCTG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAACTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKLSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCCAATCTCTCCGGGCTaGACTGGGGGTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGPISPG*TGGGGL
Trigger: AAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCTCCGGCTGGGTTCCCTaGGAACAGGTGTCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGSGWVP*EQVSEL
Trigger: CAACTCCGACACCTGTTCCCAGGGAACCCAGCCGGA...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTAGAGAGGCTTCCGGCTaGGTTCCCTGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSREASG*VPWEQV
Trigger: CACCTGTTCCCAGGGAACCCAGCCGGAAGCCTCTCT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCAGAGAGGCTTCCGGCTaGGTTCCCTGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGREASG*VPWEQV
Trigger: CACCTGTTCCCAGGGAACCCAGCCGGAAGCCTCTCT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR TCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCAGAGGGGGTGCCATTaGGCCCCGAGTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGQRGCH*APSNCK
Trigger: TTTGCAGTTACTCGGGGCTCAATGGCACCCCCTCTG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCGAGCAAATGACCTCTaGATTCATCAAGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSRANDL*IHQVLA
Trigger: CGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTATTTCACCGAGCAAATaGCCTCTGAATTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGISPSK*PLNSSS
Trigger: ACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAAT...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTTCTAAAACCTTTTGCTaGAAGAGAGGAATATGTGGC +
Preference number: 4 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGSKTFC*KRGICG
Trigger: GCCACATATTCCTCTCTTGCAGCAAAAGGTTTTAGA...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QGRLCSRCTSVMLTCELERDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTTTTGCCGGGCCATTTaGCAGCCATTCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSFCRAI*QPFLKV
Trigger: CACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTGCAGCAGCCCCCTGTaGTGTTGCTCCTTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSCSSPL*CCSFSY
Trigger: GTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LRTMVWLLEVSFSLSTGRLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...CCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PWCGFWRCPFHSAQAGVHCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...ATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGGGACGCCCATGTCATaGGGCAGCTCTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGGTPMS*GSSLWS
Trigger: ACTCCAAAGAGAGCTGCCCCATGACATGGGCGTCCC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATGGGCACCTCCTCGGTaGAAGACTGGCTCCATCCGT +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRWAPPR*KTGSIR
Trigger: ACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSCKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTGGTACAGGGGACAATaGCTAGCACCATCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSWYRGQ*LAPSGG
Trigger: GCCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTGGTACAGGGGACAATaGCTAGCACCATCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSWYRGQ*LAPSGG
Trigger: GCCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: QGRLCSRCTSVMLTCELEGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCATCATCCCCACCTTGTaGTCTCGAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGIIPTL*SRGRGR
Trigger: CCTTCCTCTCCCTCGAGAGCACAAGGTGGGGATGAT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAACTCATTCTCAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PTHSQGRLCSRCTSVMLTLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...CGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCAGGATGCTGTTGTCTaGCAAGCTTCCCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGQDAVV*QASPPL
Trigger: AAGCGGAGGGGAAGCTTGCCAGACAACAGCATCCTG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCCTTTCAGGAATCTGTaGCAGCAGTTCACTGATAAG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSPFRNL*QQFTDK
Trigger: CTTATCAGTGAACTGCTGCCACAGATTCCTGAAAGG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCAGTGGGTGGAAAGGCTaGTGCATGGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGSGWKG*CMGLLL
Trigger: CAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTACCATCTGGAGGCAGTaGGTGGAAAGGCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSTIWRQ*VERLVH
Trigger: ATGCACCAGCCTTTCCACCCACTGCCTCCAGATGGT...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTACCATCTGGAGGCAGTaGGTGGAAAGGCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSTIWRQ*VERLVH
Trigger: ATGCACCAGCCTTTCCACCCACTGCCTCCAGATGGT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTTAGAATGTTCGGTTTaGCCTGGTCAGATGGTAAGG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSLECSV*PGQMVR
Trigger: CCTTACCATCTGACCAGGCCAAACCGAACATTCTAA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp CCAACTCATTCTCAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PTHSQGRLCSRCTSVMLTIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...CGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR TCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATGGTACAGGGGACAATaGCTAGCACCATCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRWYRGQ*LAPSGG
Trigger: GCCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCAGATCTCTGCATTTTaGCGGGCCATTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGQISAF*RAICQP
Trigger: TGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAGGGTGGAAAGGCTGGTaGATGGGGCTCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRGWKGW*MGLLLR
Trigger: TCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCC...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGGGTGGAAAGGCTGGTaGATGGGGCTCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIGWKGW*MGLLLR
Trigger: TCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCATCTTGGAGGCTCAGTaGACTCCCATAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGILEAQ*TPIVLC
Trigger: GCACAGGACTATGGGAGTGCACTGAGCCTCCAAGAT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGTTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: QGRLCSRCTSVMLTCELEFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp TTAGCAAACCCACTCTTTCTCCTACAGTCTGAGCCTTCAAGGTGCTTAGCTGGCGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LANPLFLLQSEPSRCLAGGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...GCCAGCTAAGCACCTTGAAGGCTCAGACTGTAGGAGAAAGAGTGGGTTTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CCA 90 bp GGCGAGTTGTACAGACCCGGCTTGTGTACCATGTGGATTTGCTTGAACATTGTCGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GELYRPGLCTMWICLNIVGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...GACAATGTTCAAGCAAATCCACATGGTACACAAGCCGGGTCTGTACAACTCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAACTCATTCTCAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PTHSQGRLCSRCTSVMLTIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...CGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GTGTACGGGGCAAGGCTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCAGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VYGARLRTMVWLLEVSFSVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...TGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAGCCTTGCCCCGTACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTGGTTTTAGGGTCTaGGAAGCTGTCGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSLGFRV*EAVAVV
Trigger: GACGACTGCGACAGCTTCCCAGACCCTAAAACCAAG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTACTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVLSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSLSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAGAGAGGCTTCCGGCTaGGTTCCCTGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFREASG*VPWEQV
Trigger: CACCTGTTCCCAGGGAACCCAGCCGGAAGCCTCTCT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACAATGGGTTCGCTGGTaGACACCAGTCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRQWVRW*TPVCQG
Trigger: TCCCTGACAGACTGGTGTCCACCAGCGAACCCATTG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGGGTCTCGGTTGAAGTaGAACTTGAGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGGSRLK*NLSGEK
Trigger: CTTCTCCCCACTCAAGTTCCACTTCAACCGAGACCC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ACCAAGCAAACATTTGCCTCTGCTCAATGGGATCGAGCACGCGCTAGCTACGTGATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TKQTFASAQWDRARASYVIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...CACGTAGCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR TCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCTCCTTTTGAGAGCATaGAGAGATGAATTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSLLLRA*RDEFLS
Trigger: TGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCCTCCTCTTCCTCCTTaGTGTGCAGTTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIPPLPP*CAVVVS
Trigger: TGACACCACAACTGCACATCAAGGAGGAAGAGGAGG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp ACCAAGCAAACATTTGCCTCTGCTCAATGGGATCGAGCACGCGCTAGCTACGTGAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: TKQTFASAQWDRARASYVRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...CACGTAGCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR GCA 90 bp TCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: SGGVLFTQHRQGSIGSEVLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...CACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAISRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTGCTACTCCAGATCTCTaGATTTTGCCGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSATPDL*ILPGHL
Trigger: CAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGC...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTTGCAGCAGCCCCCTGTaGTGTTGCTCCTTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFCSSPL*CCSFSY
Trigger: GTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCA...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTACTCCCATAGTCCTGTaGGTGGTAGTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSTPIVL*VVVAGC
Trigger: ACAACCAGCAACTACCACGCACAGGACTATGGGAGT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGATGAGATTGGGAAAATaGCCACTCTGCCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKMRLGK*PLCRGV
Trigger: AACACCACGGCAGAGTGGGCATTTTCCCAATCTCAT...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAAGGACACGGGGAAGATaGCTTGTCTGTTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRRTRGR*LVCWFL
Trigger: CAGGAACCAACAGACAAGGCATCTTCCCCGTGTCCT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCAGGCACCCACATTGGTaGATGCAGAGGCCACAAATT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGRHPHW*MQRPQI
Trigger: AATTTGTGGCCTCTGCATGCACCAATGTGGGTGCCT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp CTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGCAAGAGAGGAATATGTaGCATCTCCGTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LRTMVWLLEVSFSLSTGRQERNM*HLRSVS
Trigger: AGACACTGAACGGAGATGCCACATATTCCTCTCTTG...CCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp CCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATTTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: PWCGFWRCPFHSAQAGVHFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...ATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAAGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp ACTCATTCTCAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: THSQGRLCSRCTSVMLTCRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...ACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAAACACAGGGTTCGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: VIGRSWNMLQNRAANTGFVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...GAACCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRAVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SGGVLFTQHRQGSIGSEVPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...CACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCCGCCCGGCCAGGGCTaGTCCTGCTTGAACTCTGAT +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLPPGQG*SCLNSD
Trigger: ATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCTTGGTTTTAGGGTCTaGGAAGCTGTCGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAILGFRV*EAVAVV
Trigger: GACGACTGCGACAGCTTCCCAGACCCTAAAACCAAG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTATGGGCACCACGTCCCTaGGCACCTCCTCGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVWAPRP*APPRWK
Trigger: CTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCA...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGACACAACCCCATCTTaGTCACTGTCGGAAAACTCC +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGDTTPS*SLSENS
Trigger: GGAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKLSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGAGAGCATGAAGAGATaGATTCCTTTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGESMKR*IPFRNL
Trigger: CAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGCATGGGGCTCCTTTTaGGAGCATGAAGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSAWGSF*EHEEMN
Trigger: ATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGRHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTGGGGTCATACCACGTaGCATCTTGTTCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSWGHTT*HLVLEI
Trigger: GATCTCAAGAACAAGATGTCACGTGGTATGACCCCA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCACATGGCGGCACGTTTaGGAGCACACCCACCGCTAT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFTWRHV*EHTHRY
Trigger: ATAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCACATGGCGGCACGTTTaGGAGCACACCCACCGCTAT +
Preference number: 4 (lower is better)
Translates to: PHSQSLCGNLIMQRNLSSTWRHV*EHTHRY
Trigger: ATAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGT...GGAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp ACCAAGCAAACATTTGCCTCTGCTCAATGGGATCGAGCACGCGCTAGCTACGTGCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: TKQTFASAQWDRARASYVLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...CACGTAGCTAGCGCGTGCTCGATCCCATTGAGCAGAGGCAAATGTTTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR GCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTAGCAAACCCACTCTTTCTCCTACAGTCTGAGCCTTCAAGGTGCTTAGCTGGCTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LANPLFLLQSEPSRCLAGSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...GCCAGCTAAGCACCTTGAAGGCTCAGACTGTAGGAGAAAGAGTGGGTTTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR GCA 90 bp CCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PHSQSLCGNLIMQRNLSSWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...GGAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTGCAGCAGCCCCCTGTaGTGTTGCTCCTTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFCSSPL*CCSFSY
Trigger: GTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTGGGTGGAAAGGCTGGTaGATGGGGCTCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFGWKGW*MGLLLR
Trigger: TCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCC...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTACTCCCATAGTCCTGTaGGTGGTAGTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAITPIVL*VVVAGC
Trigger: ACAACCAGCAACTACCACGCACAGGACTATGGGAGT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRAGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAAACACAGGGTTCCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VIGRSWNMLQNRAANTGFLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...GAACCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: KAVELCDWKILEHAAEQSVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGACACAACCCCATCTTaGTCACTGTCGGAAAACTCC +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIDTTPS*SLSENS
Trigger: GGAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTTTCACCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSFHLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGGTGAAA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGGGCTGGACTGGGGGTaGTGGTCTTGCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIGLDWG*WSCGLR
Trigger: GCGCAGCCCGCAAGACCACCACCCCCAGTCCAGCCC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLLSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTLSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GTGTACGGGGCAAGGCTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCAAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: VYGARLRTMVWLLEVSFSRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...TGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAGCCTTGCCCCGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSCKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTCAATTTCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFQFLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGAAATTG...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
3UTR CAA 72 bp GAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTaGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ESRKLHIYEGVS*RFSKAPSLPKA
Trigger: AGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR TCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCAGAGCTTCAACTACTaGGGCTTTGCATTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGQSFNY*GFAFCL
Trigger: AAGGCAAAATGCAAAGCCTCAGTAGTTGAAGCTCTG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCAGAGCTTCAACTACTaGGGCTTTGCATTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSQSFNY*GFAFCL
Trigger: AAGGCAAAATGCAAAGCCTCAGTAGTTGAAGCTCTG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCTCCTTTTGAGAGCATaGAGAGATGAATTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGLLLRA*RDEFLS
Trigger: TGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTGGGAAAGAGGCACTGTaGGGCATTCTCCCACAATCA +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFGKEAL*GILPQS
Trigger: TGATTGTGGGAGAATGCCTCACAGTGCCTCTTTCCC...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGTCTAAAACCTTTTGCTaGAAGAGAGGAATATGTGGC +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGSKTFC*KRGICG
Trigger: GCCACATATTCCTCTCTTGCAGCAAAAGGTTTTAGA...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATTCTAAAACCTTTTGCTaGAAGAGAGGAATATGTGGC +
Preference number: 4 (lower is better)
Translates to: PWCGFWRCPFHSAQAGVHSKTFC*KRGICG
Trigger: GCCACATATTCCTCTCTTGCAGCAAAAGGTTTTAGA...ATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: KAVELCDWKILEHAAEQSGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATTTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: PWCGFWRCPFHSAQAGVHFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...ATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAGGACACGGGGAAGATaGCTTGTCTGTTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFRTRGR*LVCWFL
Trigger: CAGGAACCAACAGACAAGGCATCTTCCCCGTGTCCT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTATCATAGACAGCTTTTaGAGGCAATTTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSIIDSF*RQFLFF
Trigger: GAAAAAGAGAAATTGCCTGCAAAAGCTGTCTATGAT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAAACACAGGGTTCAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VIGRSWNMLQNRAANTGFRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...GAACCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRAVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: KAVELCDWKILEHAAEQSHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGTTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: QGRLCSRCTSVMLTCELEFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AGCATGCTAACAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: SMLTKCGHPRHLFCNKNVPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...AACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTGTTAGCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACCGCCCGGCCAGGGCTaGTCCTGCTTGAACTCTGAT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKPPGQG*SCLNSD
Trigger: ATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCCATTTCTTGCCTTCTaGGTCGGTCCATGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSPFLAF*VGPCFH
Trigger: ATGAAAACATGGACCGACCCAGAAGGCAAGAAATGG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCAGGATGCTGTTGTCTaGCAAGCTTCCCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFQDAVV*QASPPL
Trigger: AAGCGGAGGGGAAGCTTGCCAGACAACAGCATCCTG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIILSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTTGTCTCTATGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FHSAQAGVHRKRSALLSLCKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...TAGAGACAAAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCGGGGACACAGCTCCTaGGCGGAGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIRGHSS*AEGKGY
Trigger: GTAGCCCTTCCCCTCCGCCCAGGAGCTGTGTCCCCG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATGCGACCCGTCCGGGTaGGAGAGAGATCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLCDPSG*ERDLGH
Trigger: GTGCCCCAGATCTCTCTCCCACCCGGACGGGTCGCA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGACAGGCATGTTCACTaGAAGCCAACTTATTGGAGC +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIDRHVH*KPTYWS
Trigger: GCTCCAATAAGTTGGCTTCCAGTGAACATGCCTGTC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
3UTR CAA 72 bp GATGGAGACCTCGTTGGACACACCGGAAGAATGATCTaGAACATAATCCAGAGCCTTTTTAGGAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: DGDLVGHTGRMI*NIIQSLFRRPG
Trigger: ACCCGGCCTCCTAAAAAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGTGTGTCCAACGAGGTCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
CDS-3UTR TCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTATCATCGCAGCTACGTaGTTTGATTTTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIIIAAT*FDFGGN
Trigger: GTTTCCCCCAAAATCAAATCACGTAGCTGCGATGAT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAATCATCGCAGCTACGTaGTTTGATTTTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRIIAAT*FDFGGN
Trigger: GTTTCCCCCAAAATCAAATCACGTAGCTGCGATGAT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATCAAGTCCTTGCGGTTaGTGCGATGCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRSSPCG*CDAFSC
Trigger: ACAAGAAAATGCATCGCATCAACCGCAAGGACTTGA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp CTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGCTTCTAAAACCTTTTaGTGCAAGAGAGGAATATGT +
Preference number: 4 (lower is better)
Translates to: LRTMVWLLEVSFSLSTGRASKTF*CKRGIC
Trigger: ACATATTCCTCTCTTGCAGCAAAAGGTTTTAGAAGC...CCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGCTTCTAAAACCTTTTaGTGCAAGAGAGGAATATGT +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGASKTF*CKRGIC
Trigger: ACATATTCCTCTCTTGCAGCAAAAGGTTTTAGAAGC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AVELCDWKILEHAAEQSRRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...GCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp GTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAAACACAGGGTTCCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: VIGRSWNMLQNRAANTGFLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...GAACCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp CAAACATCCTTCCCAACTAGATCTTTCCCAACTAGCTCTTTGGTTTGTTTGCGTTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QTSFPTRSFPTSSLVCLRWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...ACGCAAACAAACCAAAGAGCTAGTTGGGAAAGATCTAGTTGGGAAGGATGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCCGGAGTGGGCCCACTaGAGGTTCGCTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVPEWAH*RFALPP
Trigger: CGGAGGAAGAGCGAACCTGCAGTGGGCCCACTCCGG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGATCATCCCCACCTTGTaGTCTCGAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLIIPTL*SRGRGR
Trigger: CCTTCCTCTCCCTCGAGAGCACAAGGTGGGGATGAT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGTTGCGGTTGATGCGATaGATTTTCTTGTACATTTTG +
Preference number: 4 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGLRLMR*IFLYIL
Trigger: CAAAATGTACAAGAAAATGCATCGCATCAACCGCAA...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAAGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 4 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp CCCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PSFSVSLWQPYHATKSEFLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...GAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AVELCDWKILEHAAEQSRIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...GCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAAATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp ACTCTCTCCTATCATTTGCTCTGGCTCCCAACAAAATGGTTCAGGAAGGATAAACACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: TLSYHLLWLPTKWFRKDKHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...TTTATCCTTCCTGAACCATTTTGTTGGGAGCCAGAGCAAATGATAGGAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CCA 90 bp GTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAAACACAGGGTTCGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VIGRSWNMLQNRAANTGFVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...GAACCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCCCCAAGCCCCGGAGTaGGCCCACTGCAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCPQAPE*AHCRFA
Trigger: AGCGAACCTGCAGTGGGCCCACTCCGGGGCTTGGGG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACCGCCCGGCCAGGGCTaGTCCTGCTTGAACTCTGAT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEPPGQG*SCLNSD
Trigger: ATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGTGTAGTGTTGTGCCGCCCGGCCAGGGCTaGTCCTGCTTGAACTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLDIYFVTRMLQTGCSVVPPGQG*SCLNSD
Trigger: ATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGG...CACAACACTACACCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAATGGGCACCTCCTCGGTaGAAGACTGGCTCCATCCGT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKWAPPR*KTGSIR
Trigger: ACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCA...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTTGGGCACCACGTCCCTaGGCACCTCCTCGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVWAPRP*APPRWK
Trigger: CTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCA...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCTCTCCGGGCTGGACTaGGGGTGGTGGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISLSGLD*GWWSCG
Trigger: CCCGCAAGACCACCACCCCCAGTCCAGCCCGGAGAG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSLSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCTTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGLSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCGGGGACACAGCTCCTaGGCGGAGGGGAAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRGHSS*AEGKGY
Trigger: GTAGCCCTTCCCCTCCGCCCAGGAGCTGTGTCCCCG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACAATTTCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRQFLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGAAATTG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
3UTR CAA 72 bp GGCTTGTGTACCATGTGGATTTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTGTCGACAGTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: GLCTMWICLNIV*YQSFGLSTVVL
Trigger: TAGGACGACTGTCGACAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCAAATCCACATGGTACACAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
3UTR CAA 72 bp GAGAGTTCCACATTTGTGTCTGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATCTCTCCGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: ESSTFVSALKLY*AMASPISPGWT
Trigger: AGTCCAGCCCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACTTCAATGCAGACACAAATGTGGAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
CDS-3UTR TCA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRAIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR TCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAERAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCTCCTTTTGAGAGCATaGAGAGATGAATTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGLLLRA*RDEFLS
Trigger: TGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFRHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIEFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAACATGGCGGCACGTTTaGGAGCACACCCACCGCTAT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKTWRHV*EHTHRY
Trigger: ATAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGT...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KAVELCDWKILEHAAEQSSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCAACTACTGAGGCTTTaGATTTTGCCTTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSQLLRL*ILPFQS
Trigger: AGACTGAAAAGGCAAAATGCAAAGCCTCAGTAGTTG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCAACTACTGAGGCTTTaGATTTTGCCTTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSQLLRL*ILPFQS
Trigger: AGACTGAAAAGGCAAAATGCAAAGCCTCAGTAGTTG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CTGAGGACCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGATCATAGACAGCTTTTaGAGGCAATTTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LRTMVWLLEVSFSLSTGRIIDSF*RQFLFF
Trigger: GAAAAAGAGAAATTGCCTGCAAAAGCTGTCTATGAT...CCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGGTCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTCCGTTCAGTGTCTCTaGATTCCGATCATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAISVQCL*IPIIVR
Trigger: TCTTACAATGATCGGAATCCAGAGACACTGAACGGA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAAACACAGGGTTCTTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: VIGRSWNMLQNRAANTGFFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...GAACCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp CCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PHSQSLCGNLIMQRNLSSRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...GGAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: KAVELCDWKILEHAAEQSLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGGGACGCCCATGTCATaGGGCAGCTCTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKGTPMS*GSSLWS
Trigger: ACTCCAAAGAGAGCTGCCCCATGACATGGGCGTCCC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGGGCACCACGTCCCTaGGCACCTCCTCGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQWAPRP*APPRWK
Trigger: CTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTGGGCACCACGTCCCTaGGCACCTCCTCGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCWAPRP*APPRWK
Trigger: CTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAACCATCTGGAGGCAGTaGGTGGAAAGGCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVTIWRQ*VERLVH
Trigger: ATGCACCAGCCTTTCCACCCACTGCCTCCAGATGGT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATCCGGCTGGGTTCCCTaGGAACAGGTGTCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLSGWVP*EQVSEL
Trigger: CAACTCCGACACCTGTTCCCAGGGAACCCAGCCGGA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGTCCGGCTGGGTTCCCTaGGAACAGGTGTCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTSGWVP*EQVSEL
Trigger: CAACTCCGACACCTGTTCCCAGGGAACCCAGCCGGA...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGCGACCCGTCCGGGTaGGAGAGAGATCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQCDPSG*ERDLGH
Trigger: GTGCCCCAGATCTCTCTCCCACCCGGACGGGTCGCA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCAGAGGGGGTGCCATTaGGCCCCGAGTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTQRGCH*APSNCK
Trigger: TTTGCAGTTACTCGGGGCTCAATGGCACCCCCTCTG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCGAGCAAATGACCTCTaGATTCATCAAGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFRANDL*IHQVLA
Trigger: CGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGCATGGGGCTCCTTTTaGGAGCATGAAGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFAWGSF*EHEEMN
Trigger: ATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AGTCCATTAAAGTGGTATCAATCAGGAAGCTTGAGGCTTGGTAACCTGAGAGGGGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: SPLKWYQSGSLRLGNLRGGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...CCCTCTCAGGTTACCAAGCCTCAAGCTTCCTGATTGATACCACTTTAATGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR GCA 90 bp CCCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: PSFSVSLWQPYHATKSEFGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...GAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACAACTACTGAGGCTTTaGATTTTGCCTTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRQLLRL*ILPFQS
Trigger: AGACTGAAAAGGCAAAATGCAAAGCCTCAGTAGTTG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGGTGGTCTTGCGGGCTaGGCTTTTTCCGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIGGLAG*AFSGGV
Trigger: AACACCCCCGGAAAAAGCGCAGCCCGCAAGACCACC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGATCTTGGTAGGGTCTaGAAAACCTCTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGDLGRV*KTSFLF
Trigger: AAAAAGAAAAGAGGTTTTGCAGACCCTACCAAGATC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ACTCTCTCCTATCATTTGCTCTGGCTCCCAACAAAATGGTTCAGGAAGGATAAACTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: TLSYHLLWLPTKWFRKDKLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...TTTATCCTTCCTGAACCATTTTGTTGGGAGCCAGAGCAAATGATAGGAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CCA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRACRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp CCCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: PSFSVSLWQPYHATKSEFCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...GAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp ATGTTACAAACGGGGTGTAGTGTTGTGCCTCAATCCTCTCATTGTTGGCACACTTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: MLQTGCSVVPQSSHCWHTCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...AGTGTGCCAACAATGAGAGGATTGAGGCACAACACTACACCCCGTTTGTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCTTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCCGCCCGGCCAGGGCTaGTCCTGCTTGAACTCTGAT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQPPGQG*SCLNSD
Trigger: ATCAGAGTTCAAGCAGGACCAGCCCTGGCCGGGCGG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGGACGCCCATGTCATaGGGCAGCTCTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILGTPMS*GSSLWS
Trigger: ACTCCAAAGAGAGCTGCCCCATGACATGGGCGTCCC...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTGGGCACCTCCTCGGTaGAAGACTGGCTCCATCCGT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNWAPPR*KTGSIR
Trigger: ACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACTGGTGACCTCGATGTaGATGGGCACCAGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKLVTSM*MGTRVL
Trigger: TAACACCCTGGTGCCCATCCACATCGAGGTCACCAG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTTTCACCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFFHLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGGTGAAA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGTGTAGTGTTGTGATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: TLDIYFVTRMLQTGCSVVMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...CACAACACTACACCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCCAATCTCTCCGGGCTaGACTGGGGGTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNPISPG*TGGGGL
Trigger: AAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAGGGCAGAGGAGGGTCTaGGTAGTCCTCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLGQRRV*VVLSTF
Trigger: AAAGGTGCTGAGGACTACCCAGACCCTCCTCTGCCC...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFCKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAGAGAGGCTTCCGGCTaGGTTCCCTGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIREASG*VPWEQV
Trigger: CACCTGTTCCCAGGGAACCCAGCCGGAAGCCTCTCT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
3UTR CAA 72 bp ACAATGTCAAATAAATGGGATGAGATTCAGGTTTGCTaGGGGACCCTGTGGCCTAGCAAGCTGGCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TMSNKWDEIQVC*GTLWPSKLAFG
Trigger: TCCAAAAGCCAGCTTGCTAGGCCACAGGGTCCCCAAGCAAACCTGAATCTCATCCCATTTATTTGACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR TCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGAGGGCTGGTCCTGCTTaGACTCTGATCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRRAGPA*TLIPQA
Trigger: GGCTTGGGGGATCAGAGTTCAAGCAGGACCAGCCCT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCAGAGGGGGTGCCATTaGGCCCCGAGTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNQRGCH*APSNCK
Trigger: TTTGCAGTTACTCGGGGCTCAATGGCACCCCCTCTG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGGCATGGGGCTCCTTTTaGGAGCATGAAGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLAWGSF*EHEEMN
Trigger: ATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGC...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLRHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAATCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAATCATCCCCACCTTGTaGTCTCGAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLIIPTL*SRGRGR
Trigger: CCTTCCTCTCCCTCGAGAGCACAAGGTGGGGATGAT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGGTTGTCTGTAAGCGTTaGAGCACTCTAACTCACCAG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLVVCKR*STLTHQ
Trigger: CTGGTGAGTTAGAGTGCTGCAACGCTTACAGACAAC...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGCGGTTGATGCGATaGATTTTCTTGTACATTTTG +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRLRLMR*IFLYIL
Trigger: CAAAATGTACAAGAAAATGCATCGCATCAACCGCAA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTTGCGGTTGATGCGATaGATTTTCTTGTACATTTTG +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAILRLMR*IFLYIL
Trigger: CAAAATGTACAAGAAAATGCATCGCATCAACCGCAA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTGCAGCAGCCCCCTGTaGTGTTGCTCCTTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNCSSPL*CCSFSY
Trigger: GTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGATGAGATTGGGAAAATaGCCACTCTGCCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLMRLGK*PLCRGV
Trigger: AACACCACGGCAGAGTGGGCATTTTCCCAATCTCAT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QNAVTLDIYFVTRMLQTGLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...CCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KAVELCDWKILEHAAEQSVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGTGTGGGGGAGGCACTaGGGAGGGCACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCVWGRH*GGHLLK
Trigger: TTTAAGGAGGTGCCCTCCCCAGTGCCTCCCCCACAC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACTGGTGACCTCGATGTaGATGGGCACCAGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAELVTSM*MGTRVL
Trigger: TAACACCCTGGTGCCCATCCACATCGAGGTCACCAG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCCAATCTCTCCGGGCTaGACTGGGGGTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISPISPG*TGGGGL
Trigger: AAGACCACCACCCCCAGTCCAGCCCGGAGAGATTGG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAATTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 4 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKLSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLCKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGGCAAGGCACCCACATTaGTGCATGCAGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILARHPH*CMQRPQ
Trigger: TTGTGGCCTCTGCATGCACCAATGTGGGTGCCTTGC...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
3UTR CAA 72 bp TGGGTAAAAAGTCAGAAGACATGCAGTCATAAGGCCTaGAGATTCATGCACCATTATGTCCTCCCGGTTAGC +
Preference number: 4 (lower is better)
Translates to: WVKSQKTCSHKA*RFMHHYVLPVS
Trigger: GCTAACCGGGAGGACATAATGGTGCATGAATCTCAAGGCCTTATGACTGCATGTCTTCTGACTTTTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR TCA 90 bp CAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: QNAVTLDIYFVTRMLQTGIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...CCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR TCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCAGAGGGGGTGCCATTaGGCCCCGAGTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRQRGCH*APSNCK
Trigger: TTTGCAGTTACTCGGGGCTCAATGGCACCCCCTCTG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCAGAGGGGGTGCCATTaGGCCCCGAGTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISQRGCH*APSNCK
Trigger: TTTGCAGTTACTCGGGGCTCAATGGCACCCCCTCTG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGGGAAAGAGGCACTGTaGGGCATTCTCCCACAATCA +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTGKEAL*GILPQS
Trigger: TGATTGTGGGAGAATGCCTCACAGTGCCTCTTTCCC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFEFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGTGGTTTTGGCTGCATTaGTGTCTTCCTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTWFWLH*CLPWGS
Trigger: GGAGCCCCAAGGAAGACATCAATGCAGCCAAAACCA...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGACATGGCGGCACGTTTaGGAGCACACCCACCGCTAT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQTWRHV*EHTHRY
Trigger: ATAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRGWEGV*RRGEWP
Trigger: AGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCC...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QNAVTLDIYFVTRMLQTGRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...CCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAESRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTGGAGCTTCCCATGGTaGCATCCAGGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCWSFPW*HPGTGH
Trigger: ATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTGTCACCGGCCATGCTTaGAGAGCTGCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISVTGHA*RAAGSF
Trigger: GAAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGAC...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACAGATCTCTGCATTTTaGCGGGCCATTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLQISAF*RAICQP
Trigger: TGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTTGCAGCAGCCCCCTGTaGTGTTGCTCCTTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISCSSPL*CCSFSY
Trigger: GTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCA...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGGGTGGAAAGGCTGGTaGATGGGGCTCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNGWKGW*MGLLLR
Trigger: TCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGATCTTGGAGGCTCAGTaGACTCCCATAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTILEAQ*TPIVLC
Trigger: GCACAGGACTATGGGAGTGCACTGAGCCTCCAAGAT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGATCTTGGAGGCTCAGTaGACTCCCATAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILILEAQ*TPIVLC
Trigger: GCACAGGACTATGGGAGTGCACTGAGCCTCCAAGAT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGAGGACACGGGGAAGATaGCTTGTCTGTTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILRTRGR*LVCWFL
Trigger: CAGGAACCAACAGACAAGGCATCTTCCCCGTGTCCT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp ACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGTGTAGTGTTGTGAGGACACGGGGAAGATaGCTTGTCTGTTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLDIYFVTRMLQTGCSVVRTRGR*LVCWFL
Trigger: CAGGAACCAACAGACAAGGCATCTTCCCCGTGTCCT...CACAACACTACACCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCTGATAGTAACTCACTaGACTCACGGCGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTLIVTH*THGATR
Trigger: TCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTGGAGTTCAGCGAGGCTaGGAGGGAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISGVQRG*EGVCRR
Trigger: CCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCC...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: QNAVTLDIYFVTRMLQTGRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...CCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCACAGGGCCGATCCCTaGGTAATGCGGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRHRADP*VMRGFD
Trigger: ATCAAAGCCCCGCATTACCCAGGGATCGGCCCTGTG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAELVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCTGGTGACCTCGATGTaGATGGGCACCAGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVLVTSM*MGTRVL
Trigger: TAACACCCTGGTGCCCATCCACATCGAGGTCACCAG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGACACAACCCCATCTTaGTCACTGTCGGAAAACTCC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKDTTPS*SLSENS
Trigger: GGAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCAGGATGCTGTTGTCTaGCAAGCTTCCCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVQDAVV*QASPPL
Trigger: AAGCGGAGGGGAAGCTTGCCAGACAACAGCATCCTG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACAGTGGGTGGAAAGGCTaGTGCATGGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNSGWKG*CMGLLL
Trigger: CAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAGTGGGTGGAAAGGCTaGTGCATGGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIISGWKG*CMGLLL
Trigger: CAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGATGCCCACTCTGCCGTaGTGTTCCCCCTCATACCAG +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQMPTLP*CSPSYQ
Trigger: CTGGTATGAGGGGGAACACCACGGCAGAGTGGGCAT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAAAGTACCAAAGAATTTaGTTCTTCTTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRKYQRI*FFLKFP
Trigger: TGGGAACTTCAAGAAGAACCAAATTCTTTGGTACTT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAAGTACCAAAGAATTTaGTTCTTCTTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIKYQRI*FFLKFP
Trigger: TGGGAACTTCAAGAAGAACCAAATTCTTTGGTACTT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTTGGAGGACTGATAGATaGAGACCCGGGTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVWRTDR*RPGWER
Trigger: TCTCTCCCACCCGGGTCTCCATCTATCAGTCCTCCA...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130011.8
3UTR CAA 72 bp GGACATACAGAGGAGCTGCAGAGTTTTAAAGAGGTCTaGAGGACACTGATCTCTGAGAAAGAAACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GHTEELQSFKEV*RTLISEKETRE
Trigger: TTCCCTTGTTTCTTTCTCAGAGATCAGTGTCCTCAAGACCTCTTTAAAACTCTGCAGCTCCTCTGTATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR TCA 90 bp CCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCAGGTTTGGAGAACTTTaGACTCTCTTCACAGATGTT +
Preference number: 4 (lower is better)
Translates to: PHSQSLCGNLIMQRNLSSRFGEL*TLFTDV
Trigger: AACATCTGTGAAGAGAGTTCAAAGTTCTCCAAACCT...GGAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCAGGTTTGGAGAACTTTaGACTCTCTTCACAGATGTT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFRFGEL*TLFTDV
Trigger: AACATCTGTGAAGAGAGTTCAAAGTTCTCCAAACCT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp CCCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCAGGTTTGGAGAACTTTaGACTCTCTTCACAGATGTT +
Preference number: 4 (lower is better)
Translates to: PSFSVSLWQPYHATKSEFRFGEL*TLFTDV
Trigger: AACATCTGTGAAGAGAGTTCAAAGTTCTCCAAACCT...GAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR TCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTTCAGAGGATGTGAATaGAAAGTGGTCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFFRGCE*KVVKVT
Trigger: AGTGACTTTGACCACTTTTCATTCACATCCTCTGAA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGGAGAGCATGAAGAGATaGATTCCTTTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLESMKR*IPFRNL
Trigger: CAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTC...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGGTACAGGGGACAATaGCTAGCACCATCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQWYRGQ*LAPSGG
Trigger: GCCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGGGAAAGAGGCACTGTaGGGCATTCTCCCACAATCA +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVGKEAL*GILPQS
Trigger: TGATTGTGGGAGAATGCCTCACAGTGCCTCTTTCCC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGGGAAAGAGGCACTGTaGGGCATTCTCCCACAATCA +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIGKEAL*GILPQS
Trigger: TGATTGTGGGAGAATGCCTCACAGTGCCTCTTTCCC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAGTGACATCTTGTTCTTaGGATCCTGGCAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVVTSCS*DPGSHF
Trigger: AAAATGGCTGCCAGGATCTCAAGAACAAGATGTCAC...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp CAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: QNAVTLDIYFVTRMLQTGGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...CCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AGCATGCTAACAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SMLTKCGHPRHLFCNKNVSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...AACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTGTTAGCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGATCATCCCCACCTTGTaGTCTCGAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRIIPTL*SRGRGR
Trigger: CCTTCCTCTCCCTCGAGAGCACAAGGTGGGGATGAT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTATCATCCCCACCTTGTaGTCTCGAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCIIPTL*SRGRGR
Trigger: CCTTCCTCTCCCTCGAGAGCACAAGGTGGGGATGAT...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCAGATCTCTGCATTTTaGCGGGCCATTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNQISAF*RAICQP
Trigger: TGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCAGATCTCTGCATTTTaGCGGGCCATTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVQISAF*RAICQP
Trigger: TGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCCAACTACTGAGGCTTTaGATTTTGCCTTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFQLLRL*ILPFQS
Trigger: AGACTGAAAAGGCAAAATGCAAAGCCTCAGTAGTTG...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACAGGACACGGGGAAGATaGCTTGTCTGTTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNRTRGR*LVCWFL
Trigger: CAGGAACCAACAGACAAGGCATCTTCCCCGTGTCCT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAACCCACATTGGTGCATaGAGAGGCCACAAATTTATC +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVTHIGA*RGHKFI
Trigger: GATAAATTTGTGGCCTCTGCATGCACCAATGTGGGT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGTCCGTTCAGTGTCTCTaGATTCCGATCATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLSVQCL*IPIIVR
Trigger: TCTTACAATGATCGGAATCCAGAGACACTGAACGGA...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTACAAGAGAGGAATATGTaGCATCTCCGTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVQERNM*HLRSVS
Trigger: AGACACTGAACGGAGATGCCACATATTCCTCTCTTG...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAATGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGGTGCCATCCAGGGACTaGGCATGCTGGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRVPSRD*ACWEYV
Trigger: GACATATTCCCAGCATGCCCAGTCCCTGGATGGCAC...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTTTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAATTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCTGGTGACCTCGATGTaGATGGGCACCAGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISLVTSM*MGTRVL
Trigger: TAACACCCTGGTGCCCATCCACATCGAGGTCACCAG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGAGTGGGTGGAAAGGCTaGTGCATGGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQSGWKG*CMGLLL
Trigger: CAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGACCATCTGGAGGCAGTaGGTGGAAAGGCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQTIWRQ*VERLVH
Trigger: ATGCACCAGCCTTTCCACCCACTGCCTCCAGATGGT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGACCATCTGGAGGCAGTaGGTGGAAAGGCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRTIWRQ*VERLVH
Trigger: ATGCACCAGCCTTTCCACCCACTGCCTCCAGATGGT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAATGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKCKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAATCAAGTCCTTGCGGTTaGTGCGATGCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKSSPCG*CDAFSC
Trigger: ACAAGAAAATGCATCGCATCAACCGCAAGGACTTGA...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACGAGCAAATGACCTCTaGATTCATCAAGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLRANDL*IHQVLA
Trigger: CGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGGGAAAGAGGCACTGTaGGGCATTCTCCCACAATCA +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCGKEAL*GILPQS
Trigger: TGATTGTGGGAGAATGCCTCACAGTGCCTCTTTCCC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTRHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAERHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTACGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNRDLPC*MIMLEF
Trigger: GAACTCCAGCATTATCATGCAGCACGGCAGGTCTCT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTCCAGGGACTGGGCATaGTGGGAATATGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRSRDWA*WEYVSA
Trigger: TGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGTTTTGCCGGGCCATTTaGCAGCCATTCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTFCRAI*QPFLKV
Trigger: CACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAA...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATTTTGCCGGGCCATTTaGCAGCCATTCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLFCRAI*QPFLKV
Trigger: CACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGCTACTCCAGATCTCTaGATTTTGCCGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVATPDL*ILPGHL
Trigger: CAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTTCACTGATAAGCCTGTaGAGGATGCTGTTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVSLISL*RMLLSG
Trigger: GCCAGACAACAGCATCCTGCACAGGCTTATCAGTGA...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTTCACTGATAAGCCTGTaGAGGATGCTGTTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIISLISL*RMLLSG
Trigger: GCCAGACAACAGCATCCTGCACAGGCTTATCAGTGA...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTACTCCCATAGTCCTGTaGGTGGTAGTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIITPIVL*VVVAGC
Trigger: ACAACCAGCAACTACCACGCACAGGACTATGGGAGT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGATGAGATTGGGAAAATaGCCACTCTGCCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILMRLGK*PLCRGV
Trigger: AACACCACGGCAGAGTGGGCATTTTCCCAATCTCAT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGAGGACACGGGGAAGATaGCTTGTCTGTTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRTRGR*LVCWFL
Trigger: CAGGAACCAACAGACAAGGCATCTTCCCCGTGTCCT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGAGGACACGGGGAAGATaGCTTGTCTGTTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRRTRGR*LVCWFL
Trigger: CAGGAACCAACAGACAAGGCATCTTCCCCGTGTCCT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTATCATAGACAGCTTTTaGAGGCAATTTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFIIDSF*RQFLFF
Trigger: GAAAAAGAGAAATTGCCTGCAAAAGCTGTCTATGAT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAATTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCTTTCCCAACTAGCTCTTTGGTTTGTTTGCGTTTGTTTGTTTGTTTTGTTCCAATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SFPTSSLVCLRLFVCFVPIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...TGGAACAAAACAAACAAACAAACGCAAACAAACCAAAGAGCTAGTTGGGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CTTTGTCTATCATTTTCAAAAATTAGAACCGAAGAGAACAAAGGGATGCTCTCACTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LCLSFSKIRTEENKGMLSLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...TGAGAGCATCCCTTTGTTCTCTTCGGTTCTAATTTTTGAAAATGATAGACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCTTGTACCAGTCCTTTaGCCTGTCGACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCLVPVL*PVDSRP
Trigger: AGGACGACTGTCGACAGGCCAAAGGACTGGTACAAG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTTGCTTGCAGAGCTGCTaGGTCTTTCCAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISCLQSC*VFPGFC
Trigger: ACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCA...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCTTGGTTTTAGGGTCTaGGAAGCTGTCGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISLGFRV*EAVAVV
Trigger: GACGACTGCGACAGCTTCCCAGACCCTAAAACCAAG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCTTGGTTTTAGGGTCTaGGAAGCTGTCGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCLGFRV*EAVAVV
Trigger: GACGACTGCGACAGCTTCCCAGACCCTAAAACCAAG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCTTGGTTTTAGGGTCTaGGAAGCTGTCGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRLGFRV*EAVAVV
Trigger: GACGACTGCGACAGCTTCCCAGACCCTAAAACCAAG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAECKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAAGTACCAAAGAATTTaGTTCTTCTTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFKYQRI*FFLKFP
Trigger: TGGGAACTTCAAGAAGAACCAAATTCTTTGGTACTT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACAATTTCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKQFLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGAAATTG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
3UTR CAA 72 bp TCTGTTGGTTCCTGGGATTTTACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAGAATAATCCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: SVGSWDFTFVPV*VNSFKKNNPVA
Trigger: GGCGACAGGATTATTCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGTAAAATCCCAGGAACCAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
CDS-3UTR TCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGATCGGTGCCATTGTCTaGGTGGCTTTTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRIGAIV*VAFRKR
Trigger: CCTCTTTCGAAAAGCCACTCAGACAATGGCACCGAT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCGAGCAAATGACCTCTaGATTCATCAAGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIRANDL*IHQVLA
Trigger: CGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAATTTCACCGAGCAAATaGCCTCTGAATTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVISPSK*PLNSSS
Trigger: ACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAAT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR TCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAAGCTTTCAGAGGATGTaGATGAAAAGTGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVSFQRM*MKSGQS
Trigger: ACTTTGACCACTTTTCATTCACATCCTCTGAAAGCT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR TCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACAGAGCTTCAACTACTaGGGCTTTGCATTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLQSFNY*GFAFCL
Trigger: AAGGCAAAATGCAAAGCCTCAGTAGTTGAAGCTCTG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACAGAGCTTCAACTACTaGGGCTTTGCATTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEQSFNY*GFAFCL
Trigger: AAGGCAAAATGCAAAGCCTCAGTAGTTGAAGCTCTG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp CAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: QNAVTLDIYFVTRMLQTGVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...CCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNRHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCGACATCACTTTCTCTaGGTTCCAGCTCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVRHHFL*VPAHLR
Trigger: ACGAAGATGAGCTGGAACTCAGAGAAAGTGATGTCG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKEFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGTTGTCTGTAAGCGTTaGAGCACTCTAACTCACCAG +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNVVCKR*STLTHQ
Trigger: CTGGTGAGTTAGAGTGCTGCAACGCTTACAGACAAC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGGCTACTCCAGATCTCTaGATTTTGCCGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRATPDL*ILPGHL
Trigger: CAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGC...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTCACTGATAAGCCTGTaGAGGATGCTGTTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCSLISL*RMLLSG
Trigger: GCCAGACAACAGCATCCTGCACAGGCTTATCAGTGA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTCACTGATAAGCCTGTaGAGGATGCTGTTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRSLISL*RMLLSG
Trigger: GCCAGACAACAGCATCCTGCACAGGCTTATCAGTGA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGTCCTCAGCACCTTTTaGGTTCCTCTTGACAACCTC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCVLSTF*VPLDNL
Trigger: GAGGTTGTCAAGAGGAACGCAAAAGGTGCTGAGGAC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp CAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACAAACGGGGTCCGTTCAGTGTCTCTaGATTCCGATCATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QNAVTLDIYFVTRMLQTGSVQCL*IPIIVR
Trigger: TCTTACAATGATCGGAATCCAGAGACACTGAACGGA...CCCCGTTTGTAACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACAAGAGAGGAATATGTaGCATCTCCGTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEQERNM*HLRSVS
Trigger: AGACACTGAACGGAGATGCCACATATTCCTCTCTTG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIICRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRDWAC*EYVSAE
Trigger: TTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGATCTATAGAGCGGGATaGAGCTTCCCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRIYRAG*SFPWCH
Trigger: ATGGCACCATGGGAAGCTCCATCCCGCTCTATAGAT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CTCGTCTGGCATTATAGTTACCCTGCACCCAGCTTTCTGGTAAAGAAAGTAACATTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: LVWHYSYPAPSFLVKKVTFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...TGTTACTTTCTTTACCAGAAAGCTGGGTGCAGGGTAACTATAATGCCAGACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGTGGGGCAGCTCTCTTTaGAGTCTTCTTCACATAACA +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILWGSSL*SLLHIT
Trigger: TGTTATGTGAAGAAGACTCCAAAGAGAGCTGCCCCA...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATGGGGCAGCTCTCTTTaGAGTCTTCTTCACATAACA +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLWGSSL*SLLHIT
Trigger: TGTTATGTGAAGAAGACTCCAAAGAGAGCTGCCCCA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGACACAACCCCATCTTaGTCACTGTCGGAAAACTCC +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQDTTPS*SLSENS
Trigger: GGAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCCTTTCAGGAATCTGTaGCAGCAGTTCACTGATAAG +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTPFRNL*QQFTDK
Trigger: CTTATCAGTGAACTGCTGCCACAGATTCCTGAAAGG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AGCATGCTAACAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SMLTKCGHPRHLFCNKNVSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...AACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTGTTAGCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIICKFCH*SSCGAE
Trigger: CTCTGCCCCACAGCTACTCCAGTGACAGAATTTACA...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACAATTTCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEQFLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGAAATTG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGATGGCTCTTTCCTCTaGGCCAGGCATAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQDGSFL*ARHSIV
Trigger: TACAATGCTATGCCTGGCCCAGAGGAAAGAGCCATC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTATCATCGCAGCTACGTaGTTTGATTTTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIIIAAT*FDFGGN
Trigger: GTTTCCCCCAAAATCAAATCACGTAGCTGCGATGAT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTCAAGTCCTTGCGGTTaGTGCGATGCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNSSPCG*CDAFSC
Trigger: ACAAGAAAATGCATCGCATCAACCGCAAGGACTTGA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCGAGCAAATGACCTCTaGATTCATCAAGTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISRANDL*IHQVLA
Trigger: CGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR TCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAAGCTTTCAGAGGATGTaGATGAAAAGTGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKSFQRM*MKSGQS
Trigger: ACTTTGACCACTTTTCATTCACATCCTCTGAAAGCT...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCAGAGCTTCAACTACTaGGGCTTTGCATTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIQSFNY*GFAFCL
Trigger: AAGGCAAAATGCAAAGCCTCAGTAGTTGAAGCTCTG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAGAGAGCATGAAGAGATaGATTCCTTTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLESMKR*IPFRNL
Trigger: CAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTC...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAGAGAGCATGAAGAGATaGATTCCTTTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEESMKR*IPFRNL
Trigger: CAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTC...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTGCATGGGGCTCCTTTTaGGAGCATGAAGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISAWGSF*EHEEMN
Trigger: ATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGC...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR TCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTEFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGGTGATCTTTTGTCTTaGAGGTTTGGCCGAACGCTT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCGDLLS*RFGRTL
Trigger: AAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCLGICL*RIKRPA
Trigger: GGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGTTGTCTGTAAGCGTTaGAGCACTCTAACTCACCAG +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQVVCKR*STLTHQ
Trigger: CTGGTGAGTTAGAGTGCTGCAACGCTTACAGACAAC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGTTGTCTGTAAGCGTTaGAGCACTCTAACTCACCAG +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCVVCKR*STLTHQ
Trigger: CTGGTGAGTTAGAGTGCTGCAACGCTTACAGACAAC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTTTTGCCGGGCCATTTaGCAGCCATTCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRFCRAI*QPFLKV
Trigger: CACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGATGAGATTGGGAAAATaGCCACTCTGCCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRMRLGK*PLCRGV
Trigger: AACACCACGGCAGAGTGGGCATTTTCCCAATCTCAT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGATGAGATTGGGAAAATaGCCACTCTGCCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQMRLGK*PLCRGV
Trigger: AACACCACGGCAGAGTGGGCATTTTCCCAATCTCAT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTATGAGATTGGGAAAATaGCCACTCTGCCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISMRLGK*PLCRGV
Trigger: AACACCACGGCAGAGTGGGCATTTTCCCAATCTCAT...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTATGAGATTGGGAAAATaGCCACTCTGCCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCMRLGK*PLCRGV
Trigger: AACACCACGGCAGAGTGGGCATTTTCCCAATCTCAT...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGTCCGTTCAGTGTCTCTaGATTCCGATCATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILSVQCL*IPIIVR
Trigger: TCTTACAATGATCGGAATCCAGAGACACTGAACGGA...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCTTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCCRRGE*PLIVTH
Trigger: GTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGTGCCATTGTCTGAGTaGCTTTTCGAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQVPLSE*LFERGL
Trigger: CAGACCTCTTTCGAAAAGCCACTCAGACAATGGCAC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRPGFCL*RTDRWR
Trigger: TCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTTGGGGCAGCTCTCTTTaGAGTCTTCTTCACATAACA +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVWGSSL*SLLHIT
Trigger: TGTTATGTGAAGAAGACTCCAAAGAGAGCTGCCCCA...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCCTTTCAGGAATCTGTaGCAGCAGTTCACTGATAAG +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIPFRNL*QQFTDK
Trigger: CTTATCAGTGAACTGCTGCCACAGATTCCTGAAAGG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTTTCACCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCFHLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGGTGAAA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGAGTTGTACTTGGCTATaGCTTCTCCAATCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRSCTWL*LLQSLR
Trigger: CCGGAGAGATTGGAGAAGCCATAGCCAAGTACAACT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGTTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTLSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCAATTTCTCTTTTTCTaGAGTTCCCCTTCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNQFLFF*SSPSFP
Trigger: CGGGAACGAAGGGGAACTCCAGAAAAAGAGAAATTG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATTGTTCTTGAGATCCTaGCAGCCATTTTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAELFLRS*QPFLVC
Trigger: GCATACCAAAAATGGCTGCCAGGATCTCAAGAACAA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGAGGTTTGGAGAACTTTaGACTCTCTTCACAGATGTT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTRFGEL*TLFTDV
Trigger: AACATCTGTGAAGAGAGTTCAAAGTTCTCCAAACCT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTATCATCGCAGCTACGTaGTTTGATTTTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISIIAAT*FDFGGN
Trigger: GTTTCCCCCAAAATCAAATCACGTAGCTGCGATGAT...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR TCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTCAAGTCCTTGCGGTTaGTGCGATGCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRSSPCG*CDAFSC
Trigger: ACAAGAAAATGCATCGCATCAACCGCAAGGACTTGA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATTCAGAGGATGTGAATaGAAAGTGGTCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEFRGCE*KVVKVT
Trigger: AGTGACTTTGACCACTTTTCATTCACATCCTCTGAA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGAGCTTTCAGAGGATGTaGATGAAAAGTGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILSFQRM*MKSGQS
Trigger: ACTTTGACCACTTTTCATTCACATCCTCTGAAAGCT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCTCCTTTTGAGAGCATaGAGAGATGAATTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILLLLRA*RDEFLS
Trigger: TGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVEFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNEFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIEFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGCTTCTAAAACCTTTTaGTGCAAGAGAGGAATATGT +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKASKTF*CKRGIC
Trigger: ACATATTCCTCTCTTGCAGCAAAAGGTTTTAGAAGC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGTTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGTTACTGGTTTTGGCTaGATTGATGTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQVTGFG*IDVFLG
Trigger: CCCAAGGAAGACATCAATGCAGCCAAAACCAGTAAC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCAAGAGAGGAATATGTaGCATCTCCGTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCQERNM*HLRSVS
Trigger: AGACACTGAACGGAGATGCCACATATTCCTCTCTTG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTTTGTCTTGCAGGTTTaGCCGAACGCTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCFVLQV*PNASKT
Trigger: GGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTGGGGCAGCTCTCTTTaGAGTCTTCTTCACATAACA +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCWGSSL*SLLHIT
Trigger: TGTTATGTGAAGAAGACTCCAAAGAGAGCTGCCCCA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCCATTTCTTGCCTTCTaGGTCGGTCCATGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQPFLAF*VGPCFH
Trigger: ATGAAAACATGGACCGACCCAGAAGGCAAGAAATGG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCCATTTCTTGCCTTCTaGGTCGGTCCATGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRPFLAF*VGPCFH
Trigger: ATGAAAACATGGACCGACCCAGAAGGCAAGAAATGG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCCATTTCTTGCCTTCTaGGTCGGTCCATGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISPFLAF*VGPCFH
Trigger: ATGAAAACATGGACCGACCCAGAAGGCAAGAAATGG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCCTTTCAGGAATCTGTaGCAGCAGTTCACTGATAAG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRPFRNL*QQFTDK
Trigger: CTTATCAGTGAACTGCTGCCACAGATTCCTGAAAGG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp AGCATGCTAACAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTCCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SMLTKCGHPRHLFCNKNVPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...AACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTGTTAGCATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAAAGTACCAAAGAATTTaGTTCTTCTTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVKYQRI*FFLKFP
Trigger: TGGGAACTTCAAGAAGAACCAAATTCTTTGGTACTT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
3UTR CAA 72 bp AAAGTGGGAAGTTTGTACATCTGCTTTATAGGGCTGTaGGGAAGACTCCACAAGATGAAAACATTGTTACTA +
Preference number: 4 (lower is better)
Translates to: KVGSLYICFIGL*GRLHKMKTLLL
Trigger: TAGTAACAATGTTTTCATCTTGTGGAGTCTTCCCAACAGCCCTATAAAGCAGATGTACAAACTTCCCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
3UTR CAA 72 bp TTGGTCAAAATTATATCATTGACTCTCTCCTATCATTaGCTCTGGCTCCCAACAAAATGGTTCAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LVKIISLTLSYH*LWLPTKWFRKD
Trigger: ATCCTTCCTGAACCATTTTGTTGGGAGCCAGAGCAAATGATAGGAGAGAGTCAATGATATAATTTTGACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTATTTCACCGAGCAAATaGCCTCTGAATTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVISPSK*PLNSSS
Trigger: ACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAAT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACATTTCACCGAGCAAATaGCCTCTGAATTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNISPSK*PLNSSS
Trigger: ACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAAT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTATTTCACCGAGCAAATaGCCTCTGAATTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIISPSK*PLNSSS
Trigger: ACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAAT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTTTCAGAGGATGTGAATaGAAAGTGGTCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVFRGCE*KVVKVT
Trigger: AGTGACTTTGACCACTTTTCATTCACATCCTCTGAA...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAGCTTTCAGAGGATGTaGATGAAAAGTGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIISFQRM*MKSGQS
Trigger: ACTTTGACCACTTTTCATTCACATCCTCTGAAAGCT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGGTCTCCTTTCTTAAATaGCAGCTCCTTAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRVSFLK*QLLRCL
Trigger: CAGACATCTAAGGAGCTGTCATTTAAGAAAGGAGAC...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTTTGGTCAATTTTCCTaGGGATGTAGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQFGQFS*GCRQCL
Trigger: GAGACACTGTCTACATCCTCAGGAAAATTGACCAAA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCGTCACACTTTTCCATaGCATCAACGACATCACTTT +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCRHTFP*HQRHHF
Trigger: AAAGTGATGTCGTTGATGTCATGGAAAAGTGTGACG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGGAATTTGGTTCTTCTTaGAGTTCCCACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNREFGSS*SSHKPS
Trigger: GGATGGTTTGTGGGAACTTCAAGAAGAACCAAATTC...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTTCTAAAACCTTTTGCTaGAAGAGAGGAATATGTGGC +
Preference number: 4 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVSKTFC*KRGICG
Trigger: GCCACATATTCCTCTCTTGCAGCAAAAGGTTTTAGA...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATTGCGGTTGATGCGATaGATTTTCTTGTACATTTTG +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAELRLMR*IFLYIL
Trigger: CAAAATGTACAAGAAAATGCATCGCATCAACCGCAA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCAACTACTGAGGCTTTaGATTTTGCCTTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIQLLRL*ILPFQS
Trigger: AGACTGAAAAGGCAAAATGCAAAGCCTCAGTAGTTG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAATCATAGACAGCTTTTaGAGGCAATTTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKIIDSF*RQFLFF
Trigger: GAAAAAGAGAAATTGCCTGCAAAAGCTGTCTATGAT...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTCCGTTCAGTGTCTCTaGATTCCGATCATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQSVQCL*IPIIVR
Trigger: TCTTACAATGATCGGAATCCAGAGACACTGAACGGA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGTTCAAAAATACTCCTTaGCTCCGATCGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTFKNTP*LRSKFP
Trigger: AGGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAA...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCCCTCATACCAGTTTTaGTCAATTTTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRPSYQF*SIFLRM
Trigger: CATCCTCAGGAAAATTGACCAAAACTGGTATGAGGG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TIMFILIPYTGISKFRAEPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRLSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTTGTCTGTTGGTTCCTaGGATTTTACCTTCGTACCA +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQLSVGS*DFTFVP
Trigger: TGGTACGAAGGTAAAATCCCAGGAACCAACAGACAA...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTAGATGCCTTGTCTGTTaGTTCCTGGGATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISRCLVC*FLGFYL
Trigger: AAGGTAAAATCCCAGGAACCAACAGACAAGGCATCT...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACACTTCAGGGATGACTTaGTTTAGAATGTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNTSGMT*FRMFGL
Trigger: CAAACCGAACATTCTAAACCAAGTCATCCCTGAAGT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR TCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGAGGTTTGGAGAACTTTaGACTCTCTTCACAGATGTT +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRFGEL*TLFTDV
Trigger: AACATCTGTGAAGAGAGTTCAAAGTTCTCCAAACCT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTTCAGAGGATGTGAATaGAAAGTGGTCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRFRGCE*KVVKVT
Trigger: AGTGACTTTGACCACTTTTCATTCACATCCTCTGAA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR TCA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCTCCTTTTGAGAGCATaGAGAGATGAATTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQLLLRA*RDEFLS
Trigger: TGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTCTAAAACCTTTTGCTaGAAGAGAGGAATATGTGGC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCSKTFC*KRGICG
Trigger: GCCACATATTCCTCTCTTGCAGCAAAAGGTTTTAGA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACGCTTCTAAAACCTTTTaGTGCAAGAGAGGAATATGT +
Preference number: 4 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNASKTF*CKRGIC
Trigger: ACATATTCCTCTCTTGCAGCAAAAGGTTTTAGAAGC...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTTCCACATTTGTGTCTaGATTGAAGTTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRFHICV*IEVVLG
Trigger: GCCAAGTACAACTTCAATGCAGACACAAATGTGGAA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGATCATAGACAGCTTTTaGAGGCAATTTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTIIDSF*RQFLFF
Trigger: GAAAAAGAGAAATTGCCTGCAAAAGCTGTCTATGAT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGATCATAGACAGCTTTTaGAGGCAATTTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KIRLNTYIFLSANGVRILIIDSF*RQFLFF
Trigger: GAAAAAGAGAAATTGCCTGCAAAAGCTGTCTATGAT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR GCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATCAAATCTACCAACTTaGTTTGAGTATCCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLSNLPT*FEYPLC
Trigger: ACACAAAGGATACTCAAAGCAAGTTGGTAGATTTGA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTCCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAAAGTACCAAAGAATTTaGTTCTTCTTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLKYQRI*FFLKFP
Trigger: TGGGAACTTCAAGAAGAACCAAATTCTTTGGTACTT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR GCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTGCTTCTAAAACCTTTTaGTGCAAGAGAGGAATATGT +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISASKTF*CKRGIC
Trigger: ACATATTCCTCTCTTGCAGCAAAAGGTTTTAGAAGC...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR GCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTTGCGGTTGATGCGATaGATTTTCTTGTACATTTTG +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRLRLMR*IFLYIL
Trigger: CAAAATGTACAAGAAAATGCATCGCATCAACCGCAA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CCA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCCTTCGTACCAGTTTTaGTCAACTCTTTTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRPSYQF*STLLRR
Trigger: TCTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CCA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAAGTACCAAAGAATTTaGTTCTTCTTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIKYQRI*FFLKFP
Trigger: TGGGAACTTCAAGAAGAACCAAATTCTTTGGTACTT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
3UTR CAA 72 bp AGATCTTTCCCAACTAGCTCTTTGGTTTGTTTGCGTTaGTTTGTTTGTTTTGTTCCAATCCAAAGAGGTATA +
Preference number: 4 (lower is better)
Translates to: RSFPTSSLVCLR*FVCFVPIQRGI
Trigger: TATACCTCTTTGGATTGGAACAAAACAAACAAACAAACGCAAACAAACCAAAGAGCTAGTTGGGAAAGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS CCA 90 bp ATGCGAGTGGGCACCACGTCCCTGGGCACCTCCTCGGTGGAAGACTaGCTCCATCCGTGCAGCAGCCCCCTGTGCTGTTGCTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: MRVGTTSLGTSSVED*LHPCSSPLCCCSFS
Trigger: CGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCACTCGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp TATGTCAGCTGGATTTATGCGACCCGTCCGGGTGGGAGAGAGATCTaGGGCACTCGGACGGGGTGCGGGGACACAGCTCCTGGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: YVSWIYATRPGGREI*GTRTGCGDTAPGRR
Trigger: CCTCCGCCCAGGAGCTGTGTCCCCGCACCCCGTCCGAGTGCCCCAGATCTCTCTCCCACCCGGACGGGTCGCATAAATCCAGCTGACATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000155858.8
CDS CCA 90 bp GTCTATGGAGGACTGATAGATGGAGACCCGGGTGGGAGAGAGATCTaGGGCACTCGGACGGGGTGCGGGGACACAGCTCCTGGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: VYGGLIDGDPGGREI*GTRTGCGDTAPGRR
Trigger: CCTCCGCCCAGGAGCTGTGTCCCCGCACCCCGTCCGAGTGCCCCAGATCTCTCTCCCACCCGGGTCTCCATCTATCAGTCCTCCATAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130011.8
CDS GCA 90 bp ACCACGTCCCTGGGCACCTCCTCGGTGGAAGACTGGCTCCATCCGTaGAGCAGCCCCCTGTGCTGTTGCTCCTTCTCGTACTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: TTSLGTSSVEDWLHP*SSPLCCCSFSYCRI
Trigger: GATCCTGCAGTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAGGGACGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp ATTCCGAAATGCGAGTGGGCACCACGTCCCTGGGCACCTCCTCGGTaGAAGACTGGCTCCATCCGTGCAGCAGCCCCCTGTGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: IPKCEWAPRPWAPPR*KTGSIRAAAPCAVA
Trigger: AGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCACTCGCATTTCGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTGACATGGCGGCACGTTaGCGAGCACACCCACCGCTA +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSDMAAR*RAHPPL
Trigger: TAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGTC...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTGAAAGTGATGGCCCTTaGCGAGTCCCCGGGGACGTC +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSESDGP*RVPGDV
Trigger: GACGTCCCCGGGGACTCGCAAAGGGCCATCACTTTC...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTGCCAGGATCCATTTCTaGCCTTCTGGGTCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGARIHF*PSGSVH
Trigger: ATGGACCGACCCAGAAGGCAAGAAATGGATCCTGGC...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AGGTGGAACTTGATCCTGGGAGGTCCGCCCGGCCAGGGCTGGTCCTGCTTGAACACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: RWNLILGGPPGQGWSCLNTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...GTTCAAGCAGGACCAGCCCTGGCCGGGCGGACCTCCCAGGATCAAGTTCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211095.2
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTGGACACAACCCCATCTaGGTCACTGTCGGAAAACTC +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGGHNPI*VTVGKL
Trigger: GAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTCC...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 90 bp ACCTCCTCGGTGGAAGACTGGCTCCATCCGTGCAGCAGCCCCCTGTaGTGTTGCTCCTTCTCGTACTGCAGGATCCTGGATTTCACCGAG +
Preference number: 5 (lower is better)
Translates to: TSSVEDWLHPCSSPL*CCSFSYCRILDFTE
Trigger: CTCGGTGAAATCCAGGATCCTGCAGTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp AGCTGCTGGGTCTTTCCAGGCTTCTGTCTATGGAGGACTGATAGATaGAGACCCGGGTGGGAGAGAGATCTGGGGCACTCGGACGGGGTG +
Preference number: 5 (lower is better)
Translates to: SCWVFPGFCLWRTDR*RPGWERDLGHSDGV
Trigger: CACCCCGTCCGAGTGCCCCAGATCTCTCTCCCACCCGGGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130011.8
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS CCA 90 bp GAATCAGCTTTTCAAATTCCGAAATGCGAGTGGGCACCACGTCCCTaGGCACCTCCTCGGTGGAAGACTGGCTCCATCCGTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ESAFQIPKCEWAPRP*APPRWKTGSIRAAA
Trigger: GGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCACTCGCATTTCGGAATTTGAAAAGCTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp AATGGGTTCGCTGGTGGACACCAGTCTGTCAGGGATAGCCACCCTTaGGCAGTTCCCTGGATGGCTCTTTCCTCTGGGCCAGGCATAGCA +
Preference number: 5 (lower is better)
Translates to: NGFAGGHQSVRDSHP*AVPWMALSSGPGIA
Trigger: TGCTATGCCTGGCCCAGAGGAAAGAGCCATCCAGGGAACTGCCCAAGGGTGGCTATCCCTGACAGACTGGTGTCCACCAGCGAACCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTCACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS GCA 90 bp TCGGTGGAAGACTGGCTCCATCCGTGCAGCAGCCCCCTGTGCTGTTaGTCCTTCTCGTACTGCAGGATCCTGGATTTCACCGAGCAAATG +
Preference number: 5 (lower is better)
Translates to: SVEDWLHPCSSPLCC*SFSYCRILDFTEQM
Trigger: CATTTGCTCGGTGAAATCCAGGATCCTGCAGTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp GCTGGAGTTCAGCGAGGCTGGGAGGGAGTATGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCACTGGACTCACGGCGCCACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AGVQRGWEGVCRRGE*PLIVTHWTHGATRV
Trigger: AACTCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS CCA 90 bp AGCGGGATGGAGCTTCCCATGGTGCCATCCAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAATCAAGAGACCTGCCGTGCTGCATG +
Preference number: 5 (lower is better)
Translates to: SGMELPMVPSRDWAC*EYVSAESRDLPCCM
Trigger: CATGCAGCACGGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGATGGCACCATGGGAAGCTCCATCCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ACTCATTCTCAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGACATGGCGGCACGTTaGCGAGCACACCCACCGCTA +
Preference number: 5 (lower is better)
Translates to: THSQGRLCSRCTSVMLTCDMAAR*RAHPPL
Trigger: TAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGTC...ACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: QGRLCSRCTSVMLTCELETAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: QGRLCSRCTSVMLTCELESCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCGCCGGGCATCGGCCTTaGCAGGAGCTGATGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGAGHRP*QELMRC
Trigger: ACACCTCATCAGCTCCTGCAAAGGCCGATGCCCGGC...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTCCCCTCATACCAGTTTaGGTCAATTTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGPLIPV*VNFPED
Trigger: ATCCTCAGGAAAATTGACCAAAACTGGTATGAGGGG...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS GCA 90 bp AGGGGACTCGTGATCTTGGAGGCTCAGTGCACTCCCATAGTCCTGTaGGTGGTAGTTGCTGGTTGTGTCCACGTCAGGGAAAGAGGCACT +
Preference number: 5 (lower is better)
Translates to: RGLVILEAQCTPIVL*VVVAGCVHVRERGT
Trigger: AGTGCCTCTTTCCCTGACGTGGACACAACCAGCAACTACCACGCACAGGACTATGGGAGTGCACTGAGCCTCCAAGATCACGAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp CTTGGAGGCTCAGTGCACTCCCATAGTCCTGTGCGTGGTAGTTGCTaGTTGTGTCCACGTCAGGGAAAGAGGCACTGTGAGGCATTCTCC +
Preference number: 5 (lower is better)
Translates to: LGGSVHSHSPVRGSC*LCPRQGKRHCEAFS
Trigger: GGAGAATGCCTCACAGTGCCTCTTTCCCTGACGTGGACACAACCAGCAACTACCACGCACAGGACTATGGGAGTGCACTGAGCCTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGSHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAGAAAGTGATGGCCCTTaGCGAGTCCCCGGGGACGTC +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRESDGP*RVPGDV
Trigger: GACGTCCCCGGGGACTCGCAAAGGGCCATCACTTTC...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAGCCGGGCATCGGCCTTaGCAGGAGCTGATGAGGTGT +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRAGHRP*QELMRC
Trigger: ACACCTCATCAGCTCCTGCAAAGGCCGATGCCCGGC...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTACCGGAAGAATGATCTaGAACATAATCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGTGRMI*NIIQSL
Trigger: AAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGT...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS GCA 90 bp GTCTCTTCAGTGCTACTCCAGATCTCTGCATTTTGCCGGGCCATTTaGCAGCCATTCTTGAAAGTGATGGCCCTTTGCGAGTCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: VSSVLLQISAFCRAI*QPFLKVMALCESPG
Trigger: CCCCGGGGACTCGCAAAGGGCCATCACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCACTGAAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS GCA 90 bp AAACAGTCTGGGTCCTCCTCCTCCTCCTCCTCTTCCTCCTTGATGTaGAGTTGTGGTGTCACCTCTGTACTGCTGGGGTCATACCACGTG +
Preference number: 5 (lower is better)
Translates to: KQSGSSSSSSSSSLM*SCGVTSVLLGSYHV
Trigger: CACGTGGTATGACCCCAGCAGTACAGAGGTGACACCACAACTGCACATCAAGGAGGAAGAGGAGGAGGAGGAGGAGGACCCAGACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CCA 90 bp CGGCCATGCTTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGACGGGTCTTTCGTGCTGCAGAATGG +
Preference number: 5 (lower is better)
Translates to: RPCLQSCWVFPGFCL*RTDRWRRVFRAAEW
Trigger: CCATTCTGCAGCACGAAAGACCCGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCATGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000153798.8
CDS CCA 90 bp CGGCCATGCTTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGACCGGGTGTCCAAACTCCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: RPCLQSCWVFPGFCL*RTDRWRPGVQTPVL
Trigger: CAGAACTGGAGTTTGGACACCCGGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAAGCATGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155858.8
CDS-3UTR CAA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKSCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGAGGGGCGGACACATTTaGCTATCATCCCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGRGGHI*LSSPPC
Trigger: ACAAGGTGGGGATGATAGCAAAATGTGTCCGCCCCT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTATTTTGCCGGGCCATTaGCCAGCCATTCTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSILPGH*PAILES
Trigger: ACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAAT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTCCAGATCTCTGCATTTaGCCGGGCCATTTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSPDLCI*PGHLPA
Trigger: GGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGG...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGGACACAACCCCATCTaGGTCACTGTCGGAAAACTC +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGGHNPI*VTVGKL
Trigger: GAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTCC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTCTGAGGCTTTGCATTTaGCCTTTTCAGTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGLRLCI*PFQSVF
Trigger: AAAAACAGACTGAAAAGGCAAAATGCAAAGCCTCAG...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SGGVLFTQHRQGSIGSEVHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...CACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp GCTCCCAGTGGCAGGCAGACCCTCCTGCTGGTGATTTGGTGGCTGGCGGCAGGTAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: APSGRQTLLLVIWWLAAGRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...ACCTGCCGCCAGCCACCAAATCACCAGCAGGAGGGTCTGCCTGCCACTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS GCA 90 bp ACCCCATCTTGGTCACTGTCGGAAAACTCCATGTGTGTTCTAGGTTaGTCGTCGCTGGTGACCTCGATGTGGATGGGCACCAGGGTGTTA +
Preference number: 5 (lower is better)
Translates to: TPSWSLSENSMCVLG*SSLVTSMWMGTRVL
Trigger: TAACACCCTGGTGCCCATCCACATCGAGGTCACCAGCGACGAGCAACCTAGAACACACATGGAGTTTTCCGACAGTGACCAAGATGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp AGCTGCTGGGTCTTTCCAGGCTTCTGTCTATGGAGGACTGATAGATaGAGACGGGTCTTTCGTGCTGCAGAATGGACGACTTCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SCWVFPGFCLWRTDR*RRVFRAAEWTTSQA
Trigger: AGCCTGGGAAGTCGTCCATTCTGCAGCACGAAAGACCCGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000153798.8
CDS CCA 90 bp TGCTGTTCCCGCACACTTCCTGGATGTAGGGGGACGCCCATGTCATaGGGCAGCTCTCTTTGGAGTCTTCTTCACATAACAGAGAACCCA +
Preference number: 5 (lower is better)
Translates to: CCSRTLPGCRGTPMS*GSSLWSLLHITENP
Trigger: TGGGTTCTCTGTTATGTGAAGAAGACTCCAAAGAGAGCTGCCCCATGACATGGGCGTCCCCCTACATCCAGGAAGTGTGCGGGAACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ACTCATTCTCAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: THSQGRLCSRCTSVMLTCTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...ACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTGAGAATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSSCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCCAGATCTCTGCATTTaGCCGGGCCATTTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIPDLCI*PGHLPA
Trigger: GGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTATCAAGTCCTTGCGGTaGATGCGATGCATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSIKSLR*MRCIFL
Trigger: CAAGAAAATGCATCGCATCAACCGCAAGGACTTGAT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTGCCAGGATCCATTTCTaGCCTTCTGGGTCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSARIHF*PSGSVH
Trigger: ATGGACCGACCCAGAAGGCAAGAAATGGATCCTGGC...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACTGTGCAGGATGCTGTaGTCTGGCAAGCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRLCRML*SGKLPL
Trigger: GAGGGGAAGCTTGCCAGACAACAGCATCCTGCACAG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCCACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTACGCAGGCCATCTGTaGAGGGTGACACTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSYAGHL*RVTLRE
Trigger: CTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS GCA 90 bp GTGCTGCATGATAATGCTGGAGTTCAGCGAGGCTGGGAGGGAGTATaGAGAAGGGGAGAATGGCCTCTGATAGTAACTCACTGGACTCAC +
Preference number: 5 (lower is better)
Translates to: VLHDNAGVQRGWEGV*RRGEWPLIVTHWTH
Trigger: GTGAGTCCAGTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCCTCGCTGAACTCCAGCATTATCATGCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS CCA 90 bp GAGGGAGTATGCAGAAGGGGAGAATGGCCTCTGATAGTAACTCACTaGACTCACGGCGCCACCAGAGTTGCCATTGATAGTGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: EGVCRRGEWPLIVTH*THGATRVAIDSDLA
Trigger: AGCCAGATCACTATCAATGGCAACTCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCATACTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS CCA 90 bp CACTGGAAGCCAACTTATTGGAGCTTAGGGTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAGGAGGGTCTGGGTAGTCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: HWKPTYWSLGCKFCH*SSCGAEEGLGSPQH
Trigger: GTGCTGAGGACTACCCAGACCCTCCTCTGCCCCACAGCTACTCCAGTGACAGAATTTACACCCTAAGCTCCAATAAGTTGGCTTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGACATGGCGGCACGTTaGCGAGCACACCCACCGCTA +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFDMAAR*RAHPPL
Trigger: TAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGTC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAITAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRSCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAISCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp CCATGGTGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: PWCGFWRCPFHSAQAGVHCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...ATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACACCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTTGGGCTGACCTGTGTTaGAGCCTAGATCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSWADLC*SLDLLF
Trigger: GAACAGCAGATCTAGGCTCAAACACAGGTCAGCCCA...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTGGGCTGACCTGTGTTaGAGCCTAGATCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSWADLC*SLDLLF
Trigger: GAACAGCAGATCTAGGCTCAAACACAGGTCAGCCCA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGCCGGGCATCGGCCTTaGCAGGAGCTGATGAGGTGT +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFAGHRP*QELMRC
Trigger: ACACCTCATCAGCTCCTGCAAAGGCCGATGCCCGGC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTACCGGAAGAATGATCTaGAACATAATCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSTGRMI*NIIQSL
Trigger: AAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGCATTGATGTCTTCCTaGGGGCTCCTAGGATGTGAG +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSALMSS*GLLGCE
Trigger: CTCACATCCTAGGAGCCCCAAGGAAGACATCAATGC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS TCA 90 bp GGCAGTGGGTGGAAAGGCTGGTGCATGGGGCTCCTTTTGAGAGCATaGAGAGATGAATTCCTTTCAGGAATCTGTGGCAGCAGTTCACTG +
Preference number: 5 (lower is better)
Translates to: GSGWKGWCMGLLLRA*RDEFLSGICGSSSL
Trigger: CAGTGAACTGCTGCCACAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS TCA 90 bp CATCTGGAGGCAGTGGGTGGAAAGGCTGGTGCATGGGGCTCCTTTTaGGAGCATGAAGAGATGAATTCCTTTCAGGAATCTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HLEAVGGKAGAWGSF*EHEEMNSFQESVAA
Trigger: TGCTGCCACAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACTGCCTCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 90 bp TTGGGGGAAACGGTCTCTTCAGTGCTACTCCAGATCTCTGCATTTTaGCGGGCCATTTGCCAGCCATTCTTGAAAGTGATGGCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LGETVSSVLLQISAF*RAICQPFLKVMALC
Trigger: GCAAAGGGCCATCACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCACTGAAGAGACCGTTTCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS GCA 90 bp GAATTCCTTTCAGGAATCTGTGGCAGCAGTTCACTGATAAGCCTGTaGAGGATGCTGTTGTCTGGCAAGCTTCCCCTCCGCTTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: EFLSGICGSSSLISL*RMLLSGKLPLRFSA
Trigger: AGCCGAAAAGCGGAGGGGAAGCTTGCCAGACAACAGCATCCTGCACAGGCTTATCAGTGAACTGCTGCCACAGATTCCTGAAAGGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCGACATGGCGGCACGTTaGCGAGCACACCCACCGCTA +
Preference number: 5 (lower is better)
Translates to: KAVELCDWKILEHAAEQSDMAAR*RAHPPL
Trigger: TAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGTC...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp CAGGGCCGACTTTGCAGTCGCTGCACTAGTGTGATGCTGACGTGTGAGCTGGAGAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: QGRLCSRCTSVMLTCELESHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...CTCCAGCTCACACGTCAGCATCACACTAGTGCAGCGACTGCAAAGTCGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAAGGGGCGGACACATTTaGCTATCATCCCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRRGGHI*LSSPPC
Trigger: ACAAGGTGGGGATGATAGCAAAATGTGTCCGCCCCT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCTCGCAGCTACGTGATTaGATTTTGGGGGAAACGGTC +
Preference number: 5 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGSQLRD*ILGETV
Trigger: GACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGA...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTTGGGCTGACCTGTGTTaGAGCCTAGATCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIWADLC*SLDLLF
Trigger: GAACAGCAGATCTAGGCTCAAACACAGGTCAGCCCA...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGGAATTCATCAAGTCCTaGCGGTTGATGCGATGCATT +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGEFIKS*RLMRCI
Trigger: AATGCATCGCATCAACCGCAAGGACTTGATGAATTC...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGCCCCTCATACCAGTTTaGGTCAATTTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGPLIPV*VNFPED
Trigger: ATCCTCAGGAAAATTGACCAAAACTGGTATGAGGGG...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAAGGCGTGAGCTTGCGTTTCTCTAAGGCTCCCAGCCTCCCCAAGGCTCCCAGTAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: EGVSLRFSKAPSLPKAPSRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...ACTGGGAGCCTTGGGGAGGCTGGGAGCCTTAGAGAAACGCAAGCTCACGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCGGTTGAAGTGGAACTaGAGTGGGGAGAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIRLKWN*SGEKVT
Trigger: TGTCACCTTCTCCCCACTCAAGTTCCACTTCAACCG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGAGACTCTGTGTTGGTaGTCTGGGTCTCGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIETLCW*SGSRLK
Trigger: CTTCAACCGAGACCCAGACAACCAACACAGAGTCTC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS TCA 90 bp GGCGCCACCAGAGTTGCCATTGATAGTGATCTGGCTCTGGGTCGGTaGTCTTTTGTCTTGCAGGTTTGGCCGAACGCTTCTAAAACCTTT +
Preference number: 5 (lower is better)
Translates to: GATRVAIDSDLALGR*SFVLQVWPNASKTF
Trigger: AAAGGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACCGACCCAGAGCCAGATCACTATCAATGGCAACTCTGGTGGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139103.2
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000149752.8
ENSMUST00000150102.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000210946.2
CDS GCA 90 bp ATTTATACCAGGGTTCATTTTCTAAATCTATGTCAGCTGGATTTATaGGACCCGTCCGGGTGGGAGAGAGATCTGGGGCACTCGGACGGG +
Preference number: 5 (lower is better)
Translates to: IYTRVHFLNLCQLDL*DPSGWERDLGHSDG
Trigger: CCCGTCCGAGTGCCCCAGATCTCTCTCCCACCCGGACGGGTCGCATAAATCCAGCTGACATAGATTTAGAAAATGAACCCTGGTATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000155858.8
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCATTTTGCCGGGCCATTaGCCAGCCATTCTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGILPGH*PAILES
Trigger: ACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAAT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTGCCAGGATCCATTTCTaGCCTTCTGGGTCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFARIHF*PSGSVH
Trigger: ATGGACCGACCCAGAAGGCAAGAAATGGATCCTGGC...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCCCCTCATACCAGTTTaGGTCAATTTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKPLIPV*VNFPED
Trigger: ATCCTCAGGAAAATTGACCAAAACTGGTATGAGGGG...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp TGTGGCTTCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: CGFWRCPFHSAQAGVHRKKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...CTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGAAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTAGGTTCTCCCCCACCTaGAATGTTTTCATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFRFSPT*NVFMRE
Trigger: TTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCT...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS TCA 90 bp AGCTGTCGCAGTCGTCATTCAGGAGATCATCGCAGCTACGTGATTTaGTTTTGGGGGAAACGGTCTCTTCAGTGCTACTCCAGATCTCTG +
Preference number: 5 (lower is better)
Translates to: SCRSRHSGDHRSYVI*FWGKRSLQCYSRSL
Trigger: CAGAGATCTGGAGTAGCACTGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGATGATCTCCTGAATGACGACTGCGACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS TCA 90 bp TGGGAAGCTGTCGCAGTCGTCATTCAGGAGATCATCGCAGCTACGTaGTTTGATTTTGGGGGAAACGGTCTCTTCAGTGCTACTCCAGAT +
Preference number: 5 (lower is better)
Translates to: WEAVAVVIQEIIAAT*FDFGGNGLFSATPD
Trigger: ATCTGGAGTAGCACTGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGATGATCTCCTGAATGACGACTGCGACAGCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS TCA 90 bp TTTGGTATGCAAGCCCCTCATAGCTGTCCTCATCTTCCTCTCCAATaGCAGGAAGAATTACAGGCAAGGCACCCACATTGGTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: FGMQAPHSCPHLPLQ*QEELQARHPHWCMQ
Trigger: CTGCATGCACCAATGTGGGTGCCTTGCCTGTAATTCTTCCTGTCATTGGAGAGGAAGATGAGGACAGCTATGAGGGGCTTGCATACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS GCA 90 bp CCACGTGACATCTTGTTCTTGAGATCCTGGCAGCCATTTTTGGTATaGAAGCCCCTCATAGCTGTCCTCATCTTCCTCTCCAATGACAGG +
Preference number: 5 (lower is better)
Translates to: PRDILFLRSWQPFLV*KPLIAVLIFLSNDR
Trigger: CCTGTCATTGGAGAGGAAGATGAGGACAGCTATGAGGGGCTTGCATACCAAAAATGGCTGCCAGGATCTCAAGAACAAGATGTCACGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTGCAGCCAATAGGTTaGGAGAACTTTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSLQPIG*ENFELS
Trigger: AGAGAGTTCAAAGTTCTCCAAACCTATTGGCTGCAG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp CCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: PHSQSLCGNLIMQRNLSSTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...GGAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRASCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGCCCTTTAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GVLFTQHRQGSIGSEVPFSHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...AAAGGGCACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAGGGGCGGACACATTTaGCTATCATCCCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFRGGHI*LSSPPC
Trigger: ACAAGGTGGGGATGATAGCAAAATGTGTCCGCCCCT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGATGCGATGCATTTTCTaGTACATTTTGAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGMRCIF*YILRKP
Trigger: AGGCTTCCTCAAAATGTACAAGAAAATGCATCGCAT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCTGTGCAGGATGCTGTaGTCTGGCAAGCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLLCRML*SGKLPL
Trigger: GAGGGGAAGCTTGCCAGACAACAGCATCCTGCACAG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCCCCTCATACCAGTTTaGGTCAATTTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSPLIPV*VNFPED
Trigger: ATCCTCAGGAAAATTGACCAAAACTGGTATGAGGGG...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGACGGTTCTCCCCCACCTaGAATGTTTTCATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRRFSPT*NVFMRE
Trigger: TTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCG...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCTGGTTTTGGCTGCATaGATGTCTTCCTTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFLVLAA*MSSLGL
Trigger: GAGCCCCAAGGAAGACATCAATGCAGCCAAAACCAG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS TCA 90 bp GTGGAAAGGCTGGTGCATGGGGCTCCTTTTGAGAGCATGAAGAGATaGATTCCTTTCAGGAATCTGTGGCAGCAGTTCACTGATAAGCCT +
Preference number: 5 (lower is better)
Translates to: VERLVHGAPFESMKR*IPFRNLWQQFTDKP
Trigger: AGGCTTATCAGTGAACTGCTGCCACAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGCACCAGCCTTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 90 bp GAGAGAGGGAGAGGAGAGGGCTCCTCCTTAACTTCAGGGATGACTTaGTTTAGAATGTTCGGTTTGGCCTGGTCAGATGGTAAGGTTAAA +
Preference number: 5 (lower is better)
Translates to: ERGRGEGSSLTSGMT*FRMFGLAWSDGKVK
Trigger: TTTAACCTTACCATCTGACCAGGCCAAACCGAACATTCTAAACCAAGTCATCCCTGAAGTTAAGGAGGAGCCCTCTCCTCTCCCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CAA 90 bp CTACAGTCTGAGCCTTCAAGGTGCTTAGCTGGCCTCAAACATCCTTCCCAACTATGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: LQSEPSRCLAGLKHPSQLCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...TAGTTGGGAAGGATGTTTGAGGCCAGCTAAGCACCTTGAAGGCTCAGACTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CAA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRALKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp CCCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: PSFSVSLWQPYHATKSEFLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...GAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSSHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCAGGGGCGGACACATTTaGCTATCATCCCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFRGGHI*LSSPPC
Trigger: ACAAGGTGGGGATGATAGCAAAATGTGTCCGCCCCT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAGAAAGTGATGGCCCTTaGCGAGTCCCCGGGGACGTC +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLESDGP*RVPGDV
Trigger: GACGTCCCCGGGGACTCGCAAAGGGCCATCACTTTC...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTTCGCAGCTACGTGATTaGATTTTGGGGGAAACGGTC +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFSQLRD*ILGETV
Trigger: GACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGA...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: SGGVLFTQHRQGSIGSEVTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...CACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp TCTGGAGGTGTCCTTTTCACTCAGCACAGGCAGGGGTCCATAGGAAGCGAAGTGACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: SGGVLFTQHRQGSIGSEVTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...CACTTCGCTTCCTATGGACCCCTGCCTGTGCTGAGTGAAAAGGACACCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATTGGGAACCATAAGGCATGGCAGCAAGGGGCCTGCTGGGATGTTTCAGGTGGGAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: IGNHKAWQQGACWDVSGGKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...CCCACCTGAAACATCCCAGCAGGCCCCTTGCTGCCATGCCTTATGGTTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAGGGCTTCAAGGATCTaGGTAGGGTCTGCAAAACCT +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFRASRI*VGSAKP
Trigger: AGGTTTTGCAGACCCTACCAAGATCCTTGAAGCCCT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CCA 90 bp ACTTGCTTTGAGTATCCTTTGTGTGATCCTGAAGAGACTCTGTGTTaGTTGTCTGGGTCTCGGTTGAAGTGGAACTTGAGTGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TCFEYPLCDPEETLC*LSGSRLKWNLSGEK
Trigger: CTTCTCCCCACTCAAGTTCCACTTCAACCGAGACCCAGACAACCAACACAGAGTCTCTTCAGGATCACACAAAGGATACTCAAAGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGACATGGCGGCACGTTaGCGAGCACACCCACCGCTA +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVDMAAR*RAHPPL
Trigger: TAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGTC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CAA 90 bp ACCGAAGAGAACAAAGGGATGCTCTCAAAATACCTGGGTAAAAAGTCAGAAGACTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: TEENKGMLSKYLGKKSEDSCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...GTCTTCTGACTTTTTACCCAGGTATTTTGAGAGCATCCCTTTGTTCTCTTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAISHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGAAAGTGATGGCCCTTaGCGAGTCCCCGGGGACGTC +
Preference number: 5 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIESDGP*RVPGDV
Trigger: GACGTCCCCGGGGACTCGCAAAGGGCCATCACTTTC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAACCAGATCTCTGCATTTaGCCGGGCCATTTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKPDLCI*PGHLPA
Trigger: GGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGG...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGTGGGCTGACCTGTGTTaGAGCCTAGATCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLWADLC*SLDLLF
Trigger: GAACAGCAGATCTAGGCTCAAACACAGGTCAGCCCA...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGGGACACAACCCCATCTaGGTCACTGTCGGAAAACTC +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLGHNPI*VTVGKL
Trigger: GAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTCC...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GAGAGGTGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: ERWRFSHDTRQSPGESLSTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...AGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCCTGCTGGGATGTTTCAGGTGGGTTAATGCAGATGTGTGGCTGAAATGTGGCACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: GLLGCFRWVNADVWLKCGTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...GCCACATTTCAGCCACACATCTGCATTAACCCACCTGAAACATCCCAGCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCGGTTCTCCCCCACCTaGAATGTTTTCATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFRFSPT*NVFMRE
Trigger: TTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS TCA 90 bp GTGGTGGTGATGGCTCGATCCGTAGAAGCTTTCAGAGGATGTGAATaGAAAGTGGTCAAAGTCACTTTCACTACAAAAGGACGACCCTTC +
Preference number: 5 (lower is better)
Translates to: VVVMARSVEAFRGCE*KVVKVTFTTKGRPF
Trigger: GAAGGGTCGTCCTTTTGTAGTGAAAGTGACTTTGACCACTTTTCATTCACATCCTCTGAAAGCTTCTACGGATCGAGCCATCACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCTGCAGCCAATAGGTTaGGAGAACTTTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFLQPIG*ENFELS
Trigger: AGAGAGTTCAAAGTTCTCCAAACCTATTGGCTGCAG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp CCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: PHSQSLCGNLIMQRNLSSCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...GGAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: TIMFILIPYTGISKFRAESHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCCAGATCTCTGCATTTaGCCGGGCCATTTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILPDLCI*PGHLPA
Trigger: GGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTATTTTCTTGTACATTTaGAGGAAGCCTGGGGCATTA +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIIFLYI*RKPGAL
Trigger: TAATGCCCCAGGCTTCCTCAAAATGTACAAGAAAAT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAATGCGATGCATTTTCTaGTACATTTTGAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRMRCIF*YILRKP
Trigger: AGGCTTCCTCAAAATGTACAAGAAAATGCATCGCAT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCTTTTCGGCTTTTATTaGGTCGCAAATGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAILFGFY*VANVFQ
Trigger: CTGAAAGACATTTGCGACCAAATAAAAGCCGAAAAG...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCTGTGCAGGATGCTGTaGTCTGGCAAGCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILLCRML*SGKLPL
Trigger: GAGGGGAAGCTTGCCAGACAACAGCATCCTGCACAG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACTGTGCAGGATGCTGTaGTCTGGCAAGCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLLCRML*SGKLPL
Trigger: GAGGGGAAGCTTGCCAGACAACAGCATCCTGCACAG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAATCATAGACAGCTTTaGCAGGCAATTTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAINHRQL*QAISPL
Trigger: AAGAGGTGAAATTGCCTGCAAAAGCTGTCTATGATT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAAACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGAAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: KTKPSGFLRTVHLPERWRRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...TCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTCAGTAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: KPSGFLRTVHLPERWRFSKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...ACTGAATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS TCA 90 bp CTTCTCGTACTGCAGGATCCTGGATTTCACCGAGCAAATGACCTCTaGATTCATCAAGTCCTTGCGGTTGATGCGATGCATTTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: LLVLQDPGFHRANDL*IHQVLAVDAMHFLV
Trigger: TACAAGAAAATGCATCGCATCAACCGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAATCCAGGATCCTGCAGTACGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp CCCTCATTCTCAGTCTCTCTGTGGCAACCTTATCATGCAACGAAATCTGAGTTCCTGCAGCCAATAGGTTaGGAGAACTTTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: PSFSVSLWQPYHATKSEFLQPIG*ENFELS
Trigger: AGAGAGTTCAAAGTTCTCCAAACCTATTGGCTGCAG...GAACTCAGATTTCGTTGCATGATAAGGTTGCCACAGAGAGACTGAGAATGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: TIMFILIPYTGISKFRAESCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTSCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAATTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCGCAAACACAGGGTTCATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: VIGRSWNMLQNRAANTGFIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...GAACCCTGTGTTTGCGGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGATTTTGCCGGGCCATTaGCCAGCCATTCTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLILPGH*PAILES
Trigger: ACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAAT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTATCGCAGCTACGTGATTaGATTTTGGGGGAAACGGTC +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVSQLRD*ILGETV
Trigger: GACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGA...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGAATTCATCAAGTCCTaGCGGTTGATGCGATGCATT +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFEFIKS*RLMRCI
Trigger: AATGCATCGCATCAACCGCAAGGACTTGATGAATTC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAGGACACAACCCCATCTaGGTCACTGTCGGAAAACTC +
Preference number: 5 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKGHNPI*VTVGKL
Trigger: GAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTCC...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTCTGTGCAGGATGCTGTaGTCTGGCAAGCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVLCRML*SGKLPL
Trigger: GAGGGGAAGCTTGCCAGACAACAGCATCCTGCACAG...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACACGGGGAAGATGCCTaGTCTGTTGGTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: TIMFILIPYTGISKFRAEHGEDA*SVGSWD
Trigger: ATCCCAGGAACCAACAGACAAGGCATCTTCCCCGTG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGGTTCTCCCCCACCTaGAATGTTTTCATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLRFSPT*NVFMRE
Trigger: TTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AACAAAACCTTCTGGCTTCCTGAGGACGGTACACCTTCCAGAGAGGTGGCGATTAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: NKTFWLPEDGTPSREVAIKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...AATCGCCACCTCTCTGGAAGGTGTACCGTCCTCAGGAAGCCAGAAGGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATACGCAGGCCATCTGTaGAGGGTGACACTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLYAGHL*RVTLRE
Trigger: CTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGGCAAGGCACCCACATaGGTGCATGCAGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCGKAPT*VHAEAT
Trigger: TGTGGCCTCTGCATGCACCAATGTGGGTGCCTTGCC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAGGCTCGTTACTGGTTTaGGCTGCATTGATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVGSLLV*AALMSS
Trigger: GGAAGACATCAATGCAGCCAAAACCAGTAACGAGCC...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCTGCAGCCAATAGGTTaGGAGAACTTTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: KAVELCDWKILEHAAEQSLQPIG*ENFELS
Trigger: AGAGAGTTCAAAGTTCTCCAAACCTATTGGCTGCAG...GCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS-3UTR CAA 90 bp AGCATGCTAACAAAATGCGGTCACCCTAGACATCTATTTTGTAACAAGAATGTTACGGCGCCACCAGAGTaGCCATTGATAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: SMLTKCGHPRHLFCNKNVTAPPE*PLIVIW
Trigger: CCAGATCACTATCAATGGCAACTCTGGTGGCGCCGT...AACATTCTTGTTACAAAATAGATGTCTAGGGTGACCGCATTTTGTTAGCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAATTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: TIMFILIPYTGISKFRAELKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GACTTCAGAAGAACACTTTTCCAGCCAGAGTGGGGGAGAGGCACTTTCAGAAAAATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: DFRRTLFQPEWGRGTFRKIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...TTTTCTGAAAGTGCCTCTCCCCCACTCTGGCTGGAAAAGTGTTCTTCTGAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000153798.8
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTAGTCACCGGCCATGCTaGCAGAGCTGCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCSHRPC*QSCWVF
Trigger: AAAGACCCAGCAGCTCTGCAAGCATGGCCGGTGACT...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCTACGTGATTTGATTTaGGGGGAAACGGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLLRDLI*GETVSS
Trigger: TGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGATCAAGTCCTTGCGGTaGATGCGATGCATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLIKSLR*MRCIFL
Trigger: CAAGAAAATGCATCGCATCAACCGCAAGGACTTGAT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGCCAGGATCCATTTCTaGCCTTCTGGGTCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVARIHF*PSGSVH
Trigger: ATGGACCGACCCAGAAGGCAAGAAATGGATCCTGGC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTCTTTTCGGCTTTTATTaGGTCGCAAATGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFLFGFY*VANVFQ
Trigger: CTGAAAGACATTTGCGACCAAATAAAAGCCGAAAAG...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCCCCTCATACCAGTTTaGGTCAATTTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLPLIPV*VNFPED
Trigger: ATCCTCAGGAAAATTGACCAAAACTGGTATGAGGGG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAATACCACGTGACATCTaGTTCTTGAGATCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVIPRDI*FLRSWQ
Trigger: CTGCCAGGATCTCAAGAACAAGATGTCACGTGGTAT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTCTTGTACCAGTCCTTaGGCCTGTCGACAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCSCTSP*ACRQSS
Trigger: GGACGACTGTCGACAGGCCAAAGGACTGGTACAAGA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCTTGAAGACTGATCTCTaGGTCGTGGTGGGACGTGTG +
Preference number: 5 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFLKTDL*VVVGRV
Trigger: CACACGTCCCACCACGACCAAGAGATCAGTCTTCAA...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp AGGCAGTTGAACTATGTGATTGGAAGATCTTGGAACATGCTGCAGAACAGAGCCATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: RQLNYVIGRSWNMLQNRAIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...GGCTCTGTTCTGCAGCATGTTCCAAGATCTTCCAATCACATAGTTCAACTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTAGGGGCGGACACATTTaGCTATCATCCCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVRGGHI*LSSPPC
Trigger: ACAAGGTGGGGATGATAGCAAAATGTGTCCGCCCCT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCATTTTCTTGTACATTTaGAGGAAGCCTGGGGCATTA +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFIFLYI*RKPGAL
Trigger: TAATGCCCCAGGCTTCCTCAAAATGTACAAGAAAAT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGGCCAGGATCCATTTCTaGCCTTCTGGGTCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQARIHF*PSGSVH
Trigger: ATGGACCGACCCAGAAGGCAAGAAATGGATCCTGGC...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGCGATTCAGTCATGACACCAGACAGTCTCCTGGAGAGTCTCTCTCTCTTTTTAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: WRFSHDTRQSPGESLSLFKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...AAAAAGAGAGAGAGACTCTCCAGGAGACTGTCTGGTGTCATGACTGAATCGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGTACGCAGGCCATCTGTaGAGGGTGACACTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRYAGHL*RVTLRE
Trigger: CTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTA...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTACGCAGGCCATCTGTaGAGGGTGACACTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCYAGHL*RVTLRE
Trigger: CTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTCCTCCTCTTCCTCCTaGATGTGCAGTTGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNSSSSS*MCSCGV
Trigger: GACACCACAACTGCACATCAAGGAGGAAGAGGAGGA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTATGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTTCGCAGCTACGTGATTaGATTTTGGGGGAAACGGTC +
Preference number: 5 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIISQLRD*ILGETV
Trigger: GACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGA...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTTGGGCTGACCTGTGTTaGAGCCTAGATCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCWADLC*SLDLLF
Trigger: GAACAGCAGATCTAGGCTCAAACACAGGTCAGCCCA...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTGGACACAACCCCATCTaGGTCACTGTCGGAAAACTC +
Preference number: 5 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISGHNPI*VTVGKL
Trigger: GAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTCC...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCTTTTCGGCTTTTATTaGGTCGCAAATGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLLFGFY*VANVFQ
Trigger: CTGAAAGACATTTGCGACCAAATAAAAGCCGAAAAG...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCAAAGTTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: SKFRAESRKLHIYEGVSLTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...CAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAACTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCGGTTCTCCCCCACCTaGAATGTTTTCATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILRFSPT*NVFMRE
Trigger: TTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACGGTTCTCCCCCACCTaGAATGTTTTCATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLRFSPT*NVFMRE
Trigger: TTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TTCAGGGCAGAAAGCAGGAAACTGCATATTTATGAAGGCGTGAGCTTGCGTTTCAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: FRAESRKLHIYEGVSLRFKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...GAAACGCAAGCTCACGCCTTCATAAATATGCAGTTTCCTGCTTTCTGCCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAACCGGAAGAATGATCTaGAACATAATCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVTGRMI*NIIQSL
Trigger: AAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTAGACAGCAAGGTGATTaGACTGGTACAGAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVRQQGD*TGTEAG
Trigger: TCCAGCCTCTGTACCAGTCAAATCACCTTGCTGTCT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAACTGCAGCCAATAGGTTaGGAGAACTTTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: TIMFILIPYTGISKFRAELQPIG*ENFELS
Trigger: AGAGAGTTCAAAGTTCTCCAAACCTATTGGCTGCAG...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGCTGCAGCCAATAGGTTaGGAGAACTTTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILLQPIG*ENFELS
Trigger: AGAGAGTTCAAAGTTCTCCAAACCTATTGGCTGCAG...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFCLNIV*YQSFGL
Trigger: CAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCA...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp TGCTCTCAAAATACCTGGGTAAAAAGTCAGAAGACATGCAGTCATAAGGCCTTGATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: CSQNTWVKSQKTCSHKALIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...CAAGGCCTTATGACTGCATGTCTTCTGACTTTTTACCCAGGTATTTTGAGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000124544.8
CDS-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCTACGTGATTTGATTTaGGGGGAAACGGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTLRDLI*GETVSS
Trigger: TGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAATCAAGTCCTTGCGGTaGATGCGATGCATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLIKSLR*MRCIFL
Trigger: CAAGAAAATGCATCGCATCAACCGCAAGGACTTGAT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGGATTTCTCTAAGATGTTTCTTTACCTCCTGCCCCCAACAATGTTCCTCTGTAATCTACCAACTTGCTTaGAGTATCCTTTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: WISLRCFFTSCPQQCSSVIYQLA*SILCVI
Trigger: GATCACACAAAGGATACTCAAAGCAAGTTGGTAGAT...TACAGAGGAACATTGTTGGGGGCAGGAGGTAAAGAAACATCTTAGAGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTSHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTTGCTAAAGCCAGCCTTAACACTTAGGATGCTCCTGAAGTACTCTATAAAAATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: SLLKPALTLRMLLKYSIKIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...TTTTATAGAGTACTTCAGGAGCATCCTAAGTGTTAAGGCTGGCTTTAGCAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTATTTTGCCGGGCCATTaGCCAGCCATTCTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCILPGH*PAILES
Trigger: ACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAAT...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACATCAAGTCCTTGCGGTaGATGCGATGCATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNIKSLR*MRCIFL
Trigger: CAAGAAAATGCATCGCATCAACCGCAAGGACTTGAT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTGAATTCATCAAGTCCTaGCGGTTGATGCGATGCATT +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVEFIKS*RLMRCI
Trigger: AATGCATCGCATCAACCGCAAGGACTTGATGAATTC...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACCCCCTCATACCAGTTTaGGTCAATTTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNPLIPV*VNFPED
Trigger: ATCCTCAGGAAAATTGACCAAAACTGGTATGAGGGG...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTGCATTGAAGTTGTACTaGGCTATGGCTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIALKLY*AMASPI
Trigger: GATTGGAGAAGCCATAGCCAAGTACAACTTCAATGC...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGCGGTTCTCCCCCACCTaGAATGTTTTCATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRFSPT*NVFMRE
Trigger: TTCTCTCATGAAAACATTCAAGGTGGGGGAGAACCG...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ACGATCATGTTCATTTTGATTCCTTACACAGGCATTTCAAAGTTCAGGGCAGAAACCGGAAGAATGATCTaGAACATAATCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: TIMFILIPYTGISKFRAETGRMI*NIIQSL
Trigger: AAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGT...TTCTGCCCTGAACTTTGAAATGCCTGTGTAAGGAATCAAAATGAACATGATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIISHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AGACAGACAACTTACAAAATGGGTTATAATCTAGATCTGGGATCAGCAATGTTCAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RQTTYKMGYNLDLGSAMFSHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...GAACATTGCTGATCCCAGATCTAGATTATAACCCATTTTGTAAGTTGTCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000124544.8
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVSHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTCTACGTGATTTGATTTaGGGGGAAACGGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISLRDLI*GETVSS
Trigger: TGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAG...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000135336.9
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCTACGTGATTTGATTTaGGGGGAAACGGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCLRDLI*GETVSS
Trigger: TGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGATTTTCTTGTACATTTaGAGGAAGCCTGGGGCATTA +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILIFLYI*RKPGAL
Trigger: TAATGCCCCAGGCTTCCTCAAAATGTACAAGAAAAT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTGAATTCATCAAGTCCTaGCGGTTGATGCGATGCATT +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCEFIKS*RLMRCI
Trigger: AATGCATCGCATCAACCGCAAGGACTTGATGAATTC...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTACTGAGGCTTTGCATTTaGCCTTTTCAGTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLLRLCI*PFQSVF
Trigger: AAAAACAGACTGAAAAGGCAAAATGCAAAGCCTCAG...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGCTTTTCGGCTTTTATTaGGTCGCAAATGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTLFGFY*VANVFQ
Trigger: CTGAAAGACATTTGCGACCAAATAAAAGCCGAAAAG...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCCCCTCATACCAGTTTaGGTCAATTTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCPLIPV*VNFPED
Trigger: ATCCTCAGGAAAATTGACCAAAACTGGTATGAGGGG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TGTGGATGCTATCTTTCAGATTCACATTTACTTGTGATCTGTGAAGATACCACGACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: CGCYLSDSHLLVICEDTTTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...CGTGGTATCTTCACAGATCACAAGTAAATGTGAATCTGAAAGATAGCATCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGAAGATGCCTTGTCTGTaGGTTCCTGGGATTTTACCT +
Preference number: 5 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQKMPCL*VPGILP
Trigger: AGGTAAAATCCCAGGAACCAACAGACAAGGCATCTT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TCCTGCCCCCAACAATGTTCCTCTGTAACTGACATTTATGTGTATTTCAGATTAAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: SCPQQCSSVTDIYVYFRLRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...TAATCTGAAATACACATAAATGTCAGTTACAGAGGAACATTGTTGGGGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGAATTCAATCAAGAAGTaGTCGAGGAAAGATGACGGT +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILNSIKK*SRKDDG
Trigger: ACCGTCATCTTTCCTCGACAACTTCTTGATTGAATT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTAGTCATGCTTTAGTGTaGAAGACTGATCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCSHALV*KTDLLV
Trigger: GACCAAGAGATCAGTCTTCAACACTAAAGCATGACT...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTATTCAAAAATACTCCTaGGCTCCGATCGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVIQKYS*APIEIS
Trigger: GGAAATTTCGATCGGAGCCAAGGAGTATTTTTGAAT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACATTTTCTTGTACATTTaGAGGAAGCCTGGGGCATTA +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNIFLYI*RKPGAL
Trigger: TAATGCCCCAGGCTTCCTCAAAATGTACAAGAAAAT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTATGCGATGCATTTTCTaGTACATTTTGAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIMRCIF*YILRKP
Trigger: AGGCTTCCTCAAAATGTACAAGAAAATGCATCGCAT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp GGCACCGTAAATCCATGGAATCTTTCAGGTTTGGTATTATTTTGTAGATCTGTTAATCATAGACAGCTTTaGCAGGCAATTTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: GTVNPWNLSGLVLFCRSVNHRQL*QAISPL
Trigger: AAGAGGTGAAATTGCCTGCAAAAGCTGTCTATGATT...AACAGATCTACAAAATAATACCAAACCTGAAAGATTCCATGGATTTACGGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACAATCATAGACAGCTTTaGCAGGCAATTTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNNHRQL*QAISPL
Trigger: AAGAGGTGAAATTGCCTGCAAAAGCTGTCTATGATT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000139869.8
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TTGTCATATAGTGTAAACCAGAGCACTAGGCAAACTCGTGAAAAGAAAATGAACACCTTCGTACCAGTTTaGGTCAACTCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: LSYSVNQSTRQTREKKMNTFVPV*VNSFKK
Trigger: CTTCTTAAAAGAGTTGACCAAAACTGGTACGAAGGT...GTTCATTTTCTTTTCACGAGTTTGCCTAGTGCTCTGGTTTACACTATATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp AAAATCAGGCTCAACACATATATATTCCTGTCTGCAAATGGAGTCAGGATTCTGAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: KIRLNTYIFLSANGVRILKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...CAGAATCCTGACTCCATTTGCAGACAGGAATATATATGTGTTGAGCCTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGATGCGATGCATTTTCTaGTACATTTTGAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQMRCIF*YILRKP
Trigger: AGGCTTCCTCAAAATGTACAAGAAAATGCATCGCAT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTCTGAGGCTTTGCATTTaGCCTTTTCAGTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCLRLCI*PFQSVF
Trigger: AAAAACAGACTGAAAAGGCAAAATGCAAAGCCTCAG...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGCTTTTCGGCTTTTATTaGGTCGCAAATGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRLFGFY*VANVFQ
Trigger: CTGAAAGACATTTGCGACCAAATAAAAGCCGAAAAG...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGACATTTGTGTCTGCATaGAAGTTGTACTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRTFVSA*KLYLAM
Trigger: CATAGCCAAGTACAACTTCAATGCAGACACAAATGT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
CDS-3UTR CAA 90 bp ATTACTTTCATCTCTCTGCCTAACTCACTAACACTGCTTTTAAGTTTTAACAGGAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: ITFISLPNSLTLLLSFNRRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...CCTGTTAAAACTTAAAAGCAGTGTTAGTGAGTTAGGCAGAGAGATGAAAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATGTACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: MYNIAYELYVLLQSQTCQRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...CTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp CCAAGCGTTTCGAATATAAAACTGGTTGTGAACTTGATAGTAAAGTGGATTTCTAGAATTTGGTTCTTCTaGAAGTTCCCACAAACCATC +
Preference number: 5 (lower is better)
Translates to: PSVSNIKLVVNLIVKWISRIWFF*KFPQTI
Trigger: GATGGTTTGTGGGAACTTCAAGAAGAACCAAATTCT...AGAAATCCACTTTACTATCAAGTTCACAACCAGTTTTATATTCGAAACGCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp ATTCCTGTCTGCAAATGGAGTCAGGATTCTGGGTCTCATAGAAGAAAAATAATTAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: IPVCKWSQDSGSHRRKIIKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...AATTATTTTTCTTCTATGAGACCCAGAATCCTGACTCCATTTGCAGACAGGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS-3UTR CAA 90 bp TACAACATAGCATATGAATTATATGTCCTCCTACAATCTCAAACGTGTCAGTGTAAAGTACCAAAGAATTaGGTTCTTCTTGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: YNIAYELYVLLQSQTCQCKVPKN*VLLEVP
Trigger: GGGAACTTCAAGAAGAACCAAATTCTTTGGTACTTT...ACACTGACACGTTTGAGATTGTAGGAGGACATATAATTCATATGCTATGTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000135336.9
ENSMUST00000139869.8
ENSMUST00000171337.10
ENSMUST00000238803.2
CDS CCA 72 bp GGCACCACGTCCCTGGGCACCTCCTCGGTGGAAGACTaGCTCCATCCGTGCAGCAGCCCCCTGTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: GTTSLGTSSVED*LHPCSSPLCCC
Trigger: GCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp TGCGAGTGGGCACCACGTCCCTGGGCACCTCCTCGGTaGAAGACTGGCTCCATCCGTGCAGCAGCCCCCTGT +
Preference number: 6 (lower is better)
Translates to: CEWAPRPWAPPR*KTGSIRAAAPC
Trigger: ACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCACTCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 72 bp CTGGGCACCTCCTCGGTGGAAGACTGGCTCCATCCGTaGAGCAGCCCCCTGTGCTGTTGCTCCTTCTCGTAC +
Preference number: 6 (lower is better)
Translates to: LGTSSVEDWLHP*SSPLCCCSFSY
Trigger: GTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp AATCTATGTCAGCTGGATTTATGCGACCCGTCCGGGTaGGAGAGAGATCTGGGGCACTCGGACGGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: NLCQLDLCDPSG*ERDLGHSDGVR
Trigger: CCGCACCCCGTCCGAGTGCCCCAGATCTCTCTCCCACCCGGACGGGTCGCATAAATCCAGCTGACATAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000155858.8
CDS GCA 72 bp GACTGGCTCCATCCGTGCAGCAGCCCCCTGTGCTGTTaGTCCTTCTCGTACTGCAGGATCCTGGATTTCACC +
Preference number: 6 (lower is better)
Translates to: DWLHPCSSPLCC*SFSYCRILDFT
Trigger: GGTGAAATCCAGGATCCTGCAGTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 72 bp GTGGAAGACTGGCTCCATCCGTGCAGCAGCCCCCTGTaGTGTTGCTCCTTCTCGTACTGCAGGATCCTGGAT +
Preference number: 6 (lower is better)
Translates to: VEDWLHPCSSPL*CCSFSYCRILD
Trigger: ATCCAGGATCCTGCAGTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp CAGCGAGGCTGGGAGGGAGTATGCAGAAGGGGAGAATaGCCTCTGATAGTAACTCACTGGACTCACGGCGCC +
Preference number: 6 (lower is better)
Translates to: QRGWEGVCRRGE*PLIVTHWTHGA
Trigger: GGCGCCGTGAGTCCAGTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCATACTCCCTCCCAGCCTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS CAA 90 bp CTCGGTGGAAGACTGGCTCCATCCGTGCAGCAGCCCCCTGTGCTGTaGCTCCTTCTCGTACTGCAGGATCCTGGATTTCACCGAGCAAAT +
Preference number: 6 (lower is better)
Translates to: LGGRLAPSVQQPPVL*LLLVLQDPGFHRAN
Trigger: ATTTGCTCGGTGAAATCCAGGATCCTGCAGTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCTTCCACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 90 bp GGAGGCTCAGTGCACTCCCATAGTCCTGTGCGTGGTAGTTGCTGGTaGTGTCCACGTCAGGGAAAGAGGCACTGTGAGGCATTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: GGSVHSHSPVRGSCW*CPRQGKRHCEAFSH
Trigger: GTGGGAGAATGCCTCACAGTGCCTCTTTCCCTGACGTGGACACAACCAGCAACTACCACGCACAGGACTATGGGAGTGCACTGAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 72 bp GGGTCCTCCTCCTCCTCCTCCTCTTCCTCCTTGATGTaGAGTTGTGGTGTCACCTCTGTACTGCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: GSSSSSSSSSLM*SCGVTSVLLGS
Trigger: TGACCCCAGCAGTACAGAGGTGACACCACAACTGCACATCAAGGAGGAAGAGGAGGAGGAGGAGGAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CCA 72 bp TTTCAAATTCCGAAATGCGAGTGGGCACCACGTCCCTaGGCACCTCCTCGGTGGAAGACTGGCTCCATCCGT +
Preference number: 6 (lower is better)
Translates to: FQIPKCEWAPRP*APPRWKTGSIR
Trigger: ACGGATGGAGCCAGTCTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCACTCGCATTTCGGAATTTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp CAGTCTGTCAGGGATAGCCACCCTTGGGCAGTTCCCTaGATGGCTCTTTCCTCTGGGCCAGGCATAGCATTG +
Preference number: 6 (lower is better)
Translates to: QSVRDSHPWAVP*MALSSGPGIAL
Trigger: CAATGCTATGCCTGGCCCAGAGGAAAGAGCCATCCAGGGAACTGCCCAAGGGTGGCTATCCCTGACAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 72 bp AGACTGGCTCCATCCGTGCAGCAGCCCCCTGTGCTGTaGCTCCTTCTCGTACTGCAGGATCCTGGATTTCAC +
Preference number: 6 (lower is better)
Translates to: RLAPSVQQPPVL*LLLVLQDPGFH
Trigger: GTGAAATCCAGGATCCTGCAGTACGAGAAGGAGCAACAGCACAGGGGGCTGCTGCACGGATGGAGCCAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp GAGCTTCCCATGGTGCCATCCAGGGACTGGGCATGCTaGGAATATGTCTCTGCAGAATCAAGAGACCTGCCG +
Preference number: 6 (lower is better)
Translates to: ELPMVPSRDWAC*EYVSAESRDLP
Trigger: CGGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGATGGCACCATGGGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS CCA 72 bp TGTGTTCTAGGTTGCTCGTCGCTGGTGACCTCGATGTaGATGGGCACCAGGGTGTTAGACTTGCAGCTTCGC +
Preference number: 6 (lower is better)
Translates to: CVLGCSSLVTSM*MGTRVLDLQLR
Trigger: GCGAAGCTGCAAGTCTAACACCCTGGTGCCCATCCACATCGAGGTCACCAGCGACGAGCAACCTAGAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp GTCTTTCCAGGCTTCTGTCTATGGAGGACTGATAGATaGAGACCCGGGTGGGAGAGAGATCTGGGGCACTCG +
Preference number: 6 (lower is better)
Translates to: VFPGFCLWRTDR*RPGWERDLGHS
Trigger: CGAGTGCCCCAGATCTCTCTCCCACCCGGGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130011.8
CDS CAA 90 bp GGTCTCTTCAGTGCTACTCCAGATCTCTGCATTTTGCCGGGCCATTaGCCAGCCATTCTTGAAAGTGATGGCCCTTTGCGAGTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: GLFSATPDLCILPGH*PAILESDGPLRVPG
Trigger: CCCGGGGACTCGCAAAGGGCCATCACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCACTGAAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS GCA 72 bp TGGTCACTGTCGGAAAACTCCATGTGTGTTCTAGGTTaGTCGTCGCTGGTGACCTCGATGTGGATGGGCACC +
Preference number: 6 (lower is better)
Translates to: WSLSENSMCVLG*SSLVTSMWMGT
Trigger: GGTGCCCATCCACATCGAGGTCACCAGCGACGAGCAACCTAGAACACACATGGAGTTTTCCGACAGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 72 bp GTGATCTTGGAGGCTCAGTGCACTCCCATAGTCCTGTaGGTGGTAGTTGCTGGTTGTGTCCACGTCAGGGAA +
Preference number: 6 (lower is better)
Translates to: VILEAQCTPIVL*VVVAGCVHVRE
Trigger: TTCCCTGACGTGGACACAACCAGCAACTACCACGCACAGGACTATGGGAGTGCACTGAGCCTCCAAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp TTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGACCCGGGTGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: LQSCWVFPGFCL*RTDRWRPGWER
Trigger: TCTCTCCCACCCGGGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130011.8
CDS CAA 72 bp TTGAGGAAGCCTGGGGCATTATGGGCTGACCTGTGTTaGAGCCTAGATCTGCTGTTCCCGCACACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: LRKPGALWADLC*SLDLLFPHTSW
Trigger: CCAGGAAGTGTGCGGGAACAGCAGATCTAGGCTCAAACACAGGTCAGCCCATAATGCCCCAGGCTTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CAA 72 bp CCCTGGATGGCTCTTTCCTCTGGGCCAGGCATAGCATaGTACATGGGAAGACAGGCATGTTCACTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: PWMALSSGPGIA*YMGRQACSLEA
Trigger: GGCTTCCAGTGAACATGCCTGTCTTCCCATGTACAATGCTATGCCTGGCCCAGAGGAAAGAGCCATCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp AACCCCATCTTGGTCACTGTCGGAAAACTCCATGTGTGTTCTAGGTaGCTCGTCGCTGGTGACCTCGATGTGGATGGGCACCAGGGTGTT +
Preference number: 6 (lower is better)
Translates to: NPILVTVGKLHVCSR*LVAGDLDVDGHQGV
Trigger: AACACCCTGGTGCCCATCCACATCGAGGTCACCAGCGACGAGCAACCTAGAACACACATGGAGTTTTCCGACAGTGACCAAGATGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 90 bp CCCTTCGACGTGAACGTAGTCGCTGTGGTCGGACACAACCCCATCTaGGTCACTGTCGGAAAACTCCATGTGTGTTCTAGGTTGCTCGTC +
Preference number: 6 (lower is better)
Translates to: PFDVNVVAVVGHNPI*VTVGKLHVCSRLLV
Trigger: GACGAGCAACCTAGAACACACATGGAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTCCGACCACAGCGACTACGTTCACGTCGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS TCA 72 bp TTGAGTGGGGAGAAGGTGACAGACAGCAAGGTGATTTaGCTGGTACAGAGGCTGGAGGCAGTGAGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: LSGEKVTDSKVI*LVQRLEAVREG
Trigger: TCCCTCTCTCACTGCCTCCAGCCTCTGTACCAGTCAAATCACCTTGCTGTCTGTCACCTTCTCCCCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS GCA 72 bp GTAACTTCTAGGGGACTCGTGATCTTGGAGGCTCAGTaGACTCCCATAGTCCTGTGCGTGGTAGTTGCTGGT +
Preference number: 6 (lower is better)
Translates to: VTSRGLVILEAQ*TPIVLCVVVAG
Trigger: ACCAGCAACTACCACGCACAGGACTATGGGAGTGCACTGAGCCTCCAAGATCACGAGTCCCCTAGAAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp GCGCCACCAGAGTTGCCATTGATAGTGATCTGGCTCTaGGTCGGTGATCTTTTGTCTTGCAGGTTTGGCCGA +
Preference number: 6 (lower is better)
Translates to: APPELPLIVIWL*VGDLLSCRFGR
Trigger: TCGGCCAAACCTGCAAGACAAAAGATCACCGACCCAGAGCCAGATCACTATCAATGGCAACTCTGGTGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139103.2
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000149752.8
ENSMUST00000150102.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000210946.2
CDS CCA 72 bp CGCACACTTCCTGGATGTAGGGGGACGCCCATGTCATaGGGCAGCTCTCTTTGGAGTCTTCTTCACATAACA +
Preference number: 6 (lower is better)
Translates to: RTLPGCRGTPMS*GSSLWSLLHIT
Trigger: TGTTATGTGAAGAAGACTCCAAAGAGAGCTGCCCCATGACATGGGCGTCCCCCTACATCCAGGAAGTGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CCA 72 bp ACTTCTGAATCAGCTTTTCAAATTCCGAAATGCGAGTaGGCACCACGTCCCTGGGCACCTCCTCGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: TSESAFQIPKCE*APRPWAPPRWK
Trigger: CTTCCACCGAGGAGGTGCCCAGGGACGTGGTGCCCACTCGCATTTCGGAATTTGAAAAGCTGATTCAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 72 bp GGCCATTTGCCAGCCATTCTTGAAAGTGATGGCCCTTaGCGAGTCCCCGGGGACGTCCAAATGTTGTCTGTA +
Preference number: 6 (lower is better)
Translates to: GHLPAILESDGP*RVPGDVQMLSV
Trigger: TACAGACAACATTTGGACGTCCCCGGGGACTCGCAAAGGGCCATCACTTTCAAGAATGGCTGGCAAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CAA 72 bp TTGGTCACTGTCGGAAAACTCCATGTGTGTTCTAGGTaGCTCGTCGCTGGTGACCTCGATGTGGATGGGCAC +
Preference number: 6 (lower is better)
Translates to: LVTVGKLHVCSR*LVAGDLDVDGH
Trigger: GTGCCCATCCACATCGAGGTCACCAGCGACGAGCAACCTAGAACACACATGGAGTTTTCCGACAGTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 72 bp GGCAGCAGTTCACTGATAAGCCTGTGCAGGATGCTGTaGTCTGGCAAGCTTCCCCTCCGCTTTTCGGCTTTT +
Preference number: 6 (lower is better)
Translates to: GSSSLISLCRML*SGKLPLRFSAF
Trigger: AAAAGCCGAAAAGCGGAGGGGAAGCTTGCCAGACAACAGCATCCTGCACAGGCTTATCAGTGAACTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 90 bp CACGTCAGGGAAAGAGGCACTGTGAGGCATTCTCCCACAATCATTTaGGTACAGGGGACAATGACTAGCACCATCTGGAGGCAGTGGGTG +
Preference number: 6 (lower is better)
Translates to: HVRERGTVRHSPTII*VQGTMTSTIWRQWV
Trigger: CACCCACTGCCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCAAAATGATTGTGGGAGAATGCCTCACAGTGCCTCTTTCCCTGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS TCA 72 bp GGCATTCTCCCACAATCATTTTGGTACAGGGGACAATaGCTAGCACCATCTGGAGGCAGTGGGTGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: GILPQSFWYRGQ*LAPSGGSGWKG
Trigger: GCCTTTCCACCCACTGCCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCAAAATGATTGTGGGAGAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 72 bp GAATATGTCTCTGCAGAATCAAGAGACCTGCCGTGCTaGATGATAATGCTGGAGTTCAGCGAGGCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: EYVSAESRDLPC*MIMLEFSEAGR
Trigger: CCTCCCAGCCTCGCTGAACTCCAGCATTATCATGCAGCACGGCAGGTCTCTTGATTCTGCAGAGACATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS GCA 72 bp GCCATCCAGGGACTGGGCATGCTGGGAATATGTCTCTaGAGAATCAAGAGACCTGCCGTGCTGCATGATAAT +
Preference number: 6 (lower is better)
Translates to: AIQGLGMLGICL*RIKRPAVLHDN
Trigger: ATTATCATGCAGCACGGCAGGTCTCTTGATTCTGCAGAGACATATTCCCAGCATGCCCAGTCCCTGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS GCA 72 bp GTGCTACTCCAGATCTCTGCATTTTGCCGGGCCATTTaGCAGCCATTCTTGAAAGTGATGGCCCTTTGCGAG +
Preference number: 6 (lower is better)
Translates to: VLLQISAFCRAI*QPFLKVMALCE
Trigger: CTCGCAAAGGGCCATCACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS GCA 72 bp GGGGGAAACGGTCTCTTCAGTGCTACTCCAGATCTCTaGATTTTGCCGGGCCATTTGCCAGCCATTCTTGAA +
Preference number: 6 (lower is better)
Translates to: GGNGLFSATPDL*ILPGHLPAILE
Trigger: TTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCACTGAAGAGACCGTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CCA 72 bp CTCACGGCGCCACCAGAGTTGCCATTGATAGTGATCTaGCTCTGGGTCGGTGATCTTTTGTCTTGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: LTAPPELPLIVI*LWVGDLLSCRF
Trigger: AAACCTGCAAGACAAAAGATCACCGACCCAGAGCCAGATCACTATCAATGGCAACTCTGGTGGCGCCGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139103.2
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000150102.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000210946.2
CDS CCA 72 bp TGCAGAAGGGGAGAATGGCCTCTGATAGTAACTCACTaGACTCACGGCGCCACCAGAGTTGCCATTGATAGT +
Preference number: 6 (lower is better)
Translates to: CRRGEWPLIVTH*THGATRVAIDS
Trigger: ACTATCAATGGCAACTCTGGTGGCGCCGTGAGTCCAGTGAGTTACTATCAGAGGCCATTCTCCCCTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000150102.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000211095.2
CDS CCA 72 bp TTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGACGGGTCTTTCGTGCT +
Preference number: 6 (lower is better)
Translates to: LQSCWVFPGFCL*RTDRWRRVFRA
Trigger: AGCACGAAAGACCCGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000153798.8
CDS CCA 72 bp TTGCAGAGCTGCTGGGTCTTTCCAGGCTTCTGTCTATaGAGGACTGATAGATGGAGACCGGGTGTCCAAACT +
Preference number: 6 (lower is better)
Translates to: LQSCWVFPGFCL*RTDRWRPGVQT
Trigger: AGTTTGGACACCCGGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGACCCAGCAGCTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155858.8
CDS CAA 72 bp GTGAACGTAGTCGCTGTGGTCGGACACAACCCCATCTaGGTCACTGTCGGAAAACTCCATGTGTGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: VNVVAVVGHNPI*VTVGKLHVCSR
Trigger: CCTAGAACACACATGGAGTTTTCCGACAGTGACCAAGATGGGGTTGTGTCCGACCACAGCGACTACGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 72 bp CCTGAAGAGACTCTGTGTTGGTTGTCTGGGTCTCGGTaGAAGTGGAACTTGAGTGGGGAGAAGGTGACAGAC +
Preference number: 6 (lower is better)
Translates to: PEETLCWLSGSR*KWNLSGEKVTD
Trigger: GTCTGTCACCTTCTCCCCACTCAAGTTCCACTTCAACCGAGACCCAGACAACCAACACAGAGTCTCTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp TGGGCAGTTCCCTGGATGGCTCTTTCCTCTGGGCCAGGCATAGCATaGTACATGGGAAGACAGGCATGTTCACTGGAAGCCAACTTATTG +
Preference number: 6 (lower is better)
Translates to: WAVPWMALSSGPGIA*YMGRQACSLEANLL
Trigger: CAATAAGTTGGCTTCCAGTGAACATGCCTGTCTTCCCATGTACAATGCTATGCCTGGCCCAGAGGAAAGAGCCATCCAGGGAACTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp TTTGGGGGAAACGGTCTCTTCAGTGCTACTCCAGATCTCTGCATTTaGCCGGGCCATTTGCCAGCCATTCTTGAAAGTGATGGCCCTTTG +
Preference number: 6 (lower is better)
Translates to: FGGNGLFSATPDLCI*PGHLPAILESDGPL
Trigger: CAAAGGGCCATCACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCACTGAAGAGACCGTTTCCCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS TCA 72 bp CTTGTACATTTTGAGGAAGCCTGGGGCATTATGGGCTaGCCTGTGTTTGAGCCTAGATCTGCTGTTCCCGCA +
Preference number: 6 (lower is better)
Translates to: LVHFEEAWGIMG*PVFEPRSAVPA
Trigger: TGCGGGAACAGCAGATCTAGGCTCAAACACAGGTCAGCCCATAATGCCCCAGGCTTCCTCAAAATGTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS TCA 72 bp GTACTGCTGGGGTCATACCACGTGACATCTTGTTCTTaGGATCCTGGCAGCCATTTTTGGTATGCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: VLLGSYHVTSCS*DPGSHFWYASP
Trigger: GGGGCTTGCATACCAAAAATGGCTGCCAGGATCTCAAGAACAAGATGTCACGTGGTATGACCCCAGCAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS GCA 72 bp AGGGTTCATTTTCTAAATCTATGTCAGCTGGATTTATaGGACCCGTCCGGGTGGGAGAGAGATCTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: RVHFLNLCQLDL*DPSGWERDLGH
Trigger: GTGCCCCAGATCTCTCTCCCACCCGGACGGGTCGCATAAATCCAGCTGACATAGATTTAGAAAATGAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
ENSMUST00000155858.8
CDS CCA 72 bp GTCTTTCCAGGCTTCTGTCTATGGAGGACTGATAGATaGAGACGGGTCTTTCGTGCTGCAGAATGGACGACT +
Preference number: 6 (lower is better)
Translates to: VFPGFCLWRTDR*RRVFRAAEWTT
Trigger: AGTCGTCCATTCTGCAGCACGAAAGACCCGTCTCCATCTATCAGTCCTCCATAGACAGAAGCCTGGAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000153798.8
CDS CCA 72 bp CCAACTTATTGGAGCTTAGGGTGTAAATTCTGTCACTaGAGTAGCTGTGGGGCAGAGGAGGGTCTGGGTAGT +
Preference number: 6 (lower is better)
Translates to: PTYWSLGCKFCH*SSCGAEEGLGS
Trigger: ACTACCCAGACCCTCCTCTGCCCCACAGCTACTCCAGTGACAGAATTTACACCCTAAGCTCCAATAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 72 bp CTGTGTTGGTTGTCTGGGTCTCGGTTGAAGTGGAACTaGAGTGGGGAGAAGGTGACAGACAGCAAGGTGATT +
Preference number: 6 (lower is better)
Translates to: LCWLSGSRLKWN*SGEKVTDSKVI
Trigger: AATCACCTTGCTGTCTGTCACCTTCTCCCCACTCAAGTTCCACTTCAACCGAGACCCAGACAACCAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 72 bp GGCTCGTTACTGGTTTTGGCTGCATTGATGTCTTCCTaGGGGCTCCTAGGATGTGAGGGAATGCCTAGTGAA +
Preference number: 6 (lower is better)
Translates to: GSLLVLAALMSS*GLLGCEGMPSE
Trigger: TTCACTAGGCATTCCCTCACATCCTAGGAGCCCCAAGGAAGACATCAATGCAGCCAAAACCAGTAACGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp TCCTCATCCGGCTTGTGTACCATGTGGATTTGCTTGAACATTGTCTaGTACCAGTCCTTTGGCCTGTCGACAGTCGTCCTAATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SSSGLCTMWICLNIV*YQSFGLSTVVLMAV
Trigger: CACAGCCATTAGGACGACTGTCGACAGGCCAAAGGACTGGTACAAGACAATGTTCAAGCAAATCCACATGGTACACAAGCCGGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000125295.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS TCA 72 bp AGAGTTGCCATTGATAGTGATCTGGCTCTGGGTCGGTaGTCTTTTGTCTTGCAGGTTTGGCCGAACGCTTCT +
Preference number: 6 (lower is better)
Translates to: RVAIDSDLALGR*SFVLQVWPNAS
Trigger: AGAAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACCGACCCAGAGCCAGATCACTATCAATGGCAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139103.2
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000149752.8
ENSMUST00000150102.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000210946.2
CDS TCA 72 bp GTCGCAGTCGTCATTCAGGAGATCATCGCAGCTACGTaGTTTGATTTTGGGGGAAACGGTCTCTTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: VAVVIQEIIAAT*FDFGGNGLFSA
Trigger: AGCACTGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGATGATCTCCTGAATGACGACTGCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS TCA 72 bp GCAGTGGGTGGAAAGGCTGGTGCATGGGGCTCCTTTTaGGAGCATGAAGAGATGAATTCCTTTCAGGAATCT +
Preference number: 6 (lower is better)
Translates to: AVGGKAGAWGSF*EHEEMNSFQES
Trigger: AGATTCCTGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGCACCAGCCTTTCCACCCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS TCA 72 bp GTGGTGTCACCTCTGTACTGCTGGGGTCATACCACGTaGCATCTTGTTCTTGAGATCCTGGCAGCCATTTTT +
Preference number: 6 (lower is better)
Translates to: VVSPLYCWGHTT*HLVLEILAAIF
Trigger: AAAAATGGCTGCCAGGATCTCAAGAACAAGATGTCACGTGGTATGACCCCAGCAGTACAGAGGTGACACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS GCA 72 bp ACGGTCTCTTCAGTGCTACTCCAGATCTCTGCATTTTaGCGGGCCATTTGCCAGCCATTCTTGAAAGTGATG +
Preference number: 6 (lower is better)
Translates to: TVSSVLLQISAF*RAICQPFLKVM
Trigger: CATCACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCACTGAAGAGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CCA 72 bp AGAGGAGAGGGCTCCTCCTTAACTTCAGGGATGACTTaGTTTAGAATGTTCGGTTTGGCCTGGTCAGATGGT +
Preference number: 6 (lower is better)
Translates to: RGEGSSLTSGMT*FRMFGLAWSDG
Trigger: ACCATCTGACCAGGCCAAACCGAACATTCTAAACCAAGTCATCCCTGAAGTTAAGGAGGAGCCCTCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 72 bp GAAAGAGGCACTGTGAGGCATTCTCCCACAATCATTTaGGTACAGGGGACAATGACTAGCACCATCTGGAGG +
Preference number: 6 (lower is better)
Translates to: ERGTVRHSPTII*VQGTMTSTIWR
Trigger: CCTCCAGATGGTGCTAGTCATTGTCCCCTGTACCAAAATGATTGTGGGAGAATGCCTCACAGTGCCTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 72 bp GATGGAGACCTCGTTGGACACACCGGAAGAATGATCTaGAACATAATCCAGAGCCTTTTTAGGAGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: DGDLVGHTGRMI*NIIQSLFRRRV
Trigger: CACCCGCCTCCTAAAAAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGTGTGTCCAACGAGGTCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
CDS CAA 72 bp ATTCAATCAAGAAGTTGTCGAGGAAAGATGACGGTGTaGGAGCCAATGGGTTCGCTGGTGGACACCAGTCTG +
Preference number: 6 (lower is better)
Translates to: IQSRSCRGKMTV*EPMGSLVDTSL
Trigger: CAGACTGGTGTCCACCAGCGAACCCATTGGCTCCAACACCGTCATCTTTCCTCGACAACTTCTTGATTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp CCAGAGTTGCCATTGATAGTGATCTGGCTCTGGGTCGGTGATCTTTaGTCTTGCAGGTTTGGCCGAACGCTTCTAAAACCTTTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: PELPLIVIWLWVGDL*SCRFGRTLLKPFAA
Trigger: TGCAGCAAAAGGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACCGACCCAGAGCCAGATCACTATCAATGGCAACTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS CAA 90 bp AAGCTGTCGCAGTCGTCATTCAGGAGATCATCGCAGCTACGTGATTaGATTTTGGGGGAAACGGTCTCTTCAGTGCTACTCCAGATCTCT +
Preference number: 6 (lower is better)
Translates to: KLSQSSFRRSSQLRD*ILGETVSSVLLQIS
Trigger: AGAGATCTGGAGTAGCACTGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGATGATCTCCTGAATGACGACTGCGACAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CAA 90 bp GGACTGATAGATGGAGACCTCGTTGGACACACCGGAAGAATGATCTaGAACATAATCCAGAGCCTTTTTAGGAGGCGGGTGTCCAAACTC +
Preference number: 6 (lower is better)
Translates to: GLIDGDLVGHTGRMI*NIIQSLFRRRVSKL
Trigger: GAGTTTGGACACCCGCCTCCTAAAAAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGTGTGTCCAACGAGGTCTCCATCTATCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000067065.14
ENSMUST00000125295.8
CDS CAA 90 bp GGACTGATAGATGGAGACCTCGTTGGACACACCGGAAGAATGATCTaGAACATAATCCAGAGCCTTTTTAGGAGGGGGTCTTTCGTGCTG +
Preference number: 6 (lower is better)
Translates to: GLIDGDLVGHTGRMI*NIIQSLFRRGSFVL
Trigger: CAGCACGAAAGACCCCCTCCTAAAAAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGTGTGTCCAACGAGGTCTCCATCTATCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000140088.8
ENSMUST00000171337.10
CDS CAA 90 bp TGCTTTGAGTATCCTTTGTGTGATCCTGAAGAGACTCTGTGTTGGTaGTCTGGGTCTCGGTTGAAGTGGAACTTGAGTGGGGAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: CFEYPLCDPEETLCW*SGSRLKWNLSGEKV
Trigger: CACCTTCTCCCCACTCAAGTTCCACTTCAACCGAGACCCAGACAACCAACACAGAGTCTCTTCAGGATCACACAAAGGATACTCAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp TCTTCCTCTCCAATGACAGGAAGAATTACAGGCAAGGCACCCACATaGGTGCATGCAGAGGCCACAAATTTATCACCTAGGGCTTCAAGG +
Preference number: 6 (lower is better)
Translates to: SSSPMTGRITGKAPT*VHAEATNLSPRASR
Trigger: CCTTGAAGCCCTAGGTGATAAATTTGTGGCCTCTGCATGCACCAATGTGGGTGCCTTGCCTGTAATTCTTCCTGTCATTGGAGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS TCA 72 bp CTGCAGGATCCTGGATTTCACCGAGCAAATGACCTCTaGATTCATCAAGTCCTTGCGGTTGATGCGATGCAT +
Preference number: 6 (lower is better)
Translates to: LQDPGFHRANDL*IHQVLAVDAMH
Trigger: ATGCATCGCATCAACCGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAATCCAGGATCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS TCA 72 bp CTGGTGCATGGGGCTCCTTTTGAGAGCATGAAGAGATaGATTCCTTTCAGGAATCTGTGGCAGCAGTTCACT +
Preference number: 6 (lower is better)
Translates to: LVHGAPFESMKR*IPFRNLWQQFT
Trigger: AGTGAACTGCTGCCACAGATTCCTGAAAGGAATTCATCTCTTCATGCTCTCAAAAGGAGCCCCATGCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS GCA 72 bp GTCTTGCAGGTTTGGCCGAACGCTTCTAAAACCTTTTaGTGCAAGAGAGGAATATGTGGCATCTCCGTTCAG +
Preference number: 6 (lower is better)
Translates to: VLQVWPNASKTF*CKRGICGISVQ
Trigger: CTGAACGGAGATGCCACATATTCCTCTCTTGCAGCAAAAGGTTTTAGAAGCGTTCGGCCAAACCTGCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS GCA 72 bp AGAGGTCTTGAGGACACTGATCTGGGTCTTTCGTGCTaGAGAATGGACGACTTCCCAGGCTCATATTCAAAA +
Preference number: 6 (lower is better)
Translates to: RGLEDTDLGLSC*RMDDFPGSYSK
Trigger: TTTTGAATATGAGCCTGGGAAGTCGTCCATTCTGCAGCACGAAAGACCCAGATCAGTGTCCTCAAGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134675.8
ENSMUST00000141039.8
CDS CAA 72 bp CCATTGATAGTGATCTGGCTCTGGGTCGGTGATCTTTaGTCTTGCAGGTTTGGCCGAACGCTTCTAAAACCT +
Preference number: 6 (lower is better)
Translates to: PLIVIWLWVGDL*SCRFGRTLLKP
Trigger: AGGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACCGACCCAGAGCCAGATCACTATCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000067107.15
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139103.2
ENSMUST00000139869.8
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000149752.8
ENSMUST00000150102.8
ENSMUST00000153798.8
ENSMUST00000171337.10
ENSMUST00000210946.2
CDS CAA 72 bp AACGGTCTCTTCAGTGCTACTCCAGATCTCTGCATTTaGCCGGGCCATTTGCCAGCCATTCTTGAAAGTGAT +
Preference number: 6 (lower is better)
Translates to: NGLFSATPDLCI*PGHLPAILESD
Trigger: ATCACTTTCAAGAATGGCTGGCAAATGGCCCGGCAAAATGCAGAGATCTGGAGTAGCACTGAAGAGACCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CAA 72 bp TCCTTGCGGTTGATGCGATGCATTTTCTTGTACATTTaGAGGAAGCCTGGGGCATTATGGGCTGACCTGTGT +
Preference number: 6 (lower is better)
Translates to: SLRLMRCIFLYI*RKPGALWADLC
Trigger: ACACAGGTCAGCCCATAATGCCCCAGGCTTCCTCAAAATGTACAAGAAAATGCATCGCATCAACCGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 72 bp GATGGAGACCTCGTTGGACACACCGGAAGAATGATCTaGAACATAATCCAGAGCCTTTTTAGGAGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: DGDLVGHTGRMI*NIIQSLFRRGS
Trigger: AGACCCCCTCCTAAAAAGGCTCTGGATTATGTTCAAGATCATTCTTCCGGTGTGTCCAACGAGGTCTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000140088.8
ENSMUST00000171337.10
CDS CAA 72 bp CCAATGACAGGAAGAATTACAGGCAAGGCACCCACATaGGTGCATGCAGAGGCCACAAATTTATCACCTAGG +
Preference number: 6 (lower is better)
Translates to: PMTGRITGKAPT*VHAEATNLSPR
Trigger: CCTAGGTGATAAATTTGTGGCCTCTGCATGCACCAATGTGGGTGCCTTGCCTGTAATTCTTCCTGTCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp TCGCAGTCGTCATTCAGGAGATCATCGCAGCTACGTGATTTGATTTaGGGGGAAACGGTCTCTTCAGTGCTACTCCAGATCTCTGCATTT +
Preference number: 6 (lower is better)
Translates to: SQSSFRRSSQLRDLI*GETVSSVLLQISAF
Trigger: AAATGCAGAGATCTGGAGTAGCACTGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGATGATCTCCTGAATGACGACTGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CAA 90 bp CCAGAGTTGCCATTGATAGTGATCTGGCTCTGGGTCGGTGATCTTTaGTCTTGCAGGTTTGGCCGAACGCTTCTAAAACCTTTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: PELPLIVIWLWVGDL*SCRFGRTLLKPFAE
Trigger: TTCAGCAAAAGGTTTTAGAAGCGTTCGGCCAAACCTGCAAGACAAAAGATCACCGACCCAGAGCCAGATCACTATCAATGGCAACTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000124544.8
ENSMUST00000130011.8
ENSMUST00000132139.9
ENSMUST00000134675.8
ENSMUST00000139103.2
ENSMUST00000141039.8
ENSMUST00000143820.8
ENSMUST00000149752.8
ENSMUST00000150102.8
ENSMUST00000210946.2
CDS CAA 90 bp ACTTCTCTAATTCAATCAAGAAGTTGTCGAGGAAAGATGACGGTGTaGGAGCCAATGGGTTCGCTGGTGGACACCAGTCTGTCAGGGATA +
Preference number: 6 (lower is better)
Translates to: TSLIQSRSCRGKMTV*EPMGSLVDTSLSGI
Trigger: TATCCCTGACAGACTGGTGTCCACCAGCGAACCCATTGGCTCCAACACCGTCATCTTTCCTCGACAACTTCTTGATTGAATTAGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp GTCATACCACGTGACATCTTGTTCTTGAGATCCTGGCAGCCATTTTaGGTATGCAAGCCCCTCATAGCTGTCCTCATCTTCCTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: VIPRDILFLRSWQPF*VCKPLIAVLIFLSN
Trigger: ATTGGAGAGGAAGATGAGGACAGCTATGAGGGGCTTGCATACCAAAAATGGCTGCCAGGATCTCAAGAACAAGATGTCACGTGGTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp TCTTTGGAGTCTTCTTCACATAACAGAGAACCCATACTCTCTGACTaGGTTTTAGGGTCTGGGAAGCTGTCGCAGTCGTCATTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: SLESSSHNREPILSD*VLGSGKLSQSSFRR
Trigger: TCTCCTGAATGACGACTGCGACAGCTTCCCAGACCCTAAAACCAAGTCAGAGAGTATGGGTTCTCTGTTATGTGAAGAAGACTCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CAA 90 bp TTCATCAAGTCCTTGCGGTTGATGCGATGCATTTTCTTGTACATTTaGAGGAAGCCTGGGGCATTATGGGCTGACCTGTGTTTGAGCCTA +
Preference number: 6 (lower is better)
Translates to: FIKSLRLMRCIFLYI*RKPGALWADLCLSL
Trigger: TAGGCTCAAACACAGGTCAGCCCATAATGCCCCAGGCTTCCTCAAAATGTACAAGAAAATGCATCGCATCAACCGCAAGGACTTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS TCA 72 bp TTGCAGGTTTGGCCGAACGCTTCTAAAACCTTTTGCTaGATCTGGAGACTGAGACTCACGCCCTGTATTCAT +
Preference number: 6 (lower is better)
Translates to: LQVWPNASKTFC*IWRLRLTPCIH
Trigger: ATGAATACAGGGCGTGAGTCTCAGTCTCCAGATTCAGCAAAAGGTTTTAGAAGCGTTCGGCCAAACCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000124544.8
ENSMUST00000126067.8
ENSMUST00000130011.8
ENSMUST00000130850.8
ENSMUST00000139103.2
ENSMUST00000143820.8
ENSMUST00000210946.2
CDS GCA 72 bp TTGCAGGTTTGGCCGAACGCTTCTAAAACCTTTTGCTaGAAGAGAGGAATATGTGGCATCTCCGTTCAGTGT +
Preference number: 6 (lower is better)
Translates to: LQVWPNASKTFC*KRGICGISVQC
Trigger: ACACTGAACGGAGATGCCACATATTCCTCTCTTGCAGCAAAAGGTTTTAGAAGCGTTCGGCCAAACCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067107.15
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000139869.8
ENSMUST00000153798.8
ENSMUST00000171337.10
CDS GCA 72 bp AGAAATGCAAGCTTAGACAGGCCAGGATCCATTTCTTaGCTTCTGGGTCGGTCCATGTTTTCATGCTTAGCT +
Preference number: 6 (lower is better)
Translates to: RNASLDRPGSIS*LLGRSMFSCLA
Trigger: AGCTAAGCATGAAAACATGGACCGACCCAGAAGGCAAGAAATGGATCCTGGCCTGTCTAAGCTTGCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CCA 72 bp TGGGAAGACAGGCATGTTCACTGGAAGCCAACTTATTaGAGCTTAGGGTGTAAATTCTGTCACTGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: WEDRHVHWKPTY*SLGCKFCHWSS
Trigger: GCTACTCCAGTGACAGAATTTACACCCTAAGCTCCAATAAGTTGGCTTCCAGTGAACATGCCTGTCTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CCA 72 bp ACCTTGAATGTTTTCATGAGAGAACCCAGGACGCTGTaGCTCGTTACTGGTTTTGGCTGCATTGATGTCTTC +
Preference number: 6 (lower is better)
Translates to: TLNVFMREPRTL*LVTGFGCIDVF
Trigger: GAAGACATCAATGCAGCCAAAACCAGTAACGAGCCACAGCGTCCTGGGTTCTCTCATGAAAACATTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 72 bp TCATTCAGGAGATCATCGCAGCTACGTGATTTGATTTaGGGGGAAACGGTCTCTTCAGTGCTACTCCAGATC +
Preference number: 6 (lower is better)
Translates to: SFRRSSQLRDLI*GETVSSVLLQI
Trigger: GATCTGGAGTAGCACTGAAGAGACCGTTTCCCCCAAAATCAAATCACGTAGCTGCGATGATCTCCTGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS CAA 72 bp TCTTCTTCACATAACAGAGAACCCATACTCTCTGACTaGGTTTTAGGGTCTGGGAAGCTGTCGCAGTCGTCA +
Preference number: 6 (lower is better)
Translates to: SSSHNREPILSD*VLGSGKLSQSS
Trigger: TGACGACTGCGACAGCTTCCCAGACCCTAAAACCAAGTCAGAGAGTATGGGTTCTCTGTTATGTGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000171337.10
CDS TCA 72 bp GACTCACGCCCTGCAGCCAATAGGTTTGGAGAACTTTaGACTCTCTTCACAGATGTTAACGTAACAGACATG +
Preference number: 6 (lower is better)
Translates to: DSRPAANRFGEL*TLFTDVNVTDM
Trigger: CATGTCTGTTACGTTAACATCTGTGAAGAGAGTTCAAAGTTCTCCAAACCTATTGGCTGCAGGGCGTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000067107.15
ENSMUST00000132139.9
ENSMUST00000134321.8
ENSMUST00000134675.8
ENSMUST00000135336.9
ENSMUST00000138049.9
ENSMUST00000141039.8
ENSMUST00000145458.9
ENSMUST00000149752.8
ENSMUST00000150102.8
ENSMUST00000171337.10
CDS TCA 72 bp TGTCTCTGGATTCCGATCATTGTAAGATCTCCAAGCTaGATCTGGAGACTGAGACTCACGCCCTGTATTCAT +
Preference number: 6 (lower is better)
Translates to: CLWIPIIVRSPS*IWRLRLTPCIH
Trigger: ATGAATACAGGGCGTGAGTCTCAGTCTCCAGATTCAGCTTGGAGATCTTACAATGATCGGAATCCAGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000139869.8
ENSMUST00000153798.8
CDS CAA 90 bp ATCCTGGATTTCACCGAGCAAATGACCTCTGAATTCATCAAGTCCTaGCGGTTGATGCGATGCATTTTCTTGTACATTTTGAGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: ILDFTEQMTSEFIKS*RLMRCIFLYILRKP
Trigger: AGGCTTCCTCAAAATGTACAAGAAAATGCATCGCATCAACCGCAAGGACTTGATGAATTCAGAGGTCATTTGCTCGGTGAAATCCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 90 bp GGCTCCTCCTTAACTTCAGGGATGACTTGGTTTAGAATGTTCGGTTaGGCCTGGTCAGATGGTAAGGTTAAAGCACTAAACTTCTCTAAT +
Preference number: 6 (lower is better)
Translates to: GSSLTSGMTWFRMFG*AWSDGKVKALNFSN
Trigger: ATTAGAGAAGTTTAGTGCTTTAACCTTACCATCTGACCAGGCCAAACCGAACATTCTAAACCAAGTCATCCCTGAAGTTAAGGAGGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CCA 72 bp TCAGGGATGACTTGGTTTAGAATGTTCGGTTTGGCCTaGTCAGATGGTAAGGTTAAAGCACTAAACTTCTCT +
Preference number: 6 (lower is better)
Translates to: SGMTWFRMFGLA*SDGKVKALNFS
Trigger: AGAGAAGTTTAGTGCTTTAACCTTACCATCTGACCAGGCCAAACCGAACATTCTAAACCAAGTCATCCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS TCA 72 bp ATGGCTCGATCCGTAGAAGCTTTCAGAGGATGTGAATaGAAAGTGGTCAAAGTCACTTTCACTACAAAAGGA +
Preference number: 6 (lower is better)
Translates to: MARSVEAFRGCE*KVVKVTFTTKG
Trigger: TCCTTTTGTAGTGAAAGTGACTTTGACCACTTTTCATTCACATCCTCTGAAAGCTTCTACGGATCGAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067065.14
ENSMUST00000067107.15
ENSMUST00000125295.8
ENSMUST00000135336.9
ENSMUST00000171337.10
CDS CAA 72 bp GTTAAAGCACTAAACTTCTCTAATTCAATCAAGAAGTaGTCGAGGAAAGATGACGGTGTTGGAGCCAATGGG +
Preference number: 6 (lower is better)
Translates to: VKALNFSNSIKK*SRKDDGVGANG
Trigger: CCCATTGGCTCCAACACCGTCATCTTTCCTCGACAACTTCTTGATTGAATTAGAGAAGTTTAGTGCTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 72 bp TTAACTTCAGGGATGACTTGGTTTAGAATGTTCGGTTaGGCCTGGTCAGATGGTAAGGTTAAAGCACTAAAC +
Preference number: 6 (lower is better)
Translates to: LTSGMTWFRMFG*AWSDGKVKALN
Trigger: GTTTAGTGCTTTAACCTTACCATCTGACCAGGCCAAACCGAACATTCTAAACCAAGTCATCCCTGAAGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 90 bp CTCTTTTCTTTTTATTCAAATCTACCAACTTGCTTTGAGTATCCTTaGTGTGATCCTGAAGAGACTCTGTGTTGGTTGTCTGGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: LFSFYSNLPTCFEYP*CDPEETLCWLSGSR
Trigger: CCGAGACCCAGACAACCAACACAGAGTCTCTTCAGGATCACACAAAGGATACTCAAAGCAAGTTGGTAGATTTGAATAAAAAGAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2
CDS CAA 72 bp TTTTATTCAAATCTACCAACTTGCTTTGAGTATCCTTaGTGTGATCCTGAAGAGACTCTGTGTTGGTTGTCT +
Preference number: 6 (lower is better)
Translates to: FYSNLPTCFEYP*CDPEETLCWLS
Trigger: AGACAACCAACACAGAGTCTCTTCAGGATCACACAAAGGATACTCAAAGCAAGTTGGTAGATTTGAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238803.2