Pregenerated sensors for SOHLH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027794Ensembl transcript IDs: ENSMUST00000029369.5
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGAGCCGTaGGTGCTGGCCTGCCTGGTTGTAGAAGCTTACACCCACATGGGC | + |
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Preference number: 1 (lower is better) Translates to: QQKSMTEPITRLQEP*VLACLVVEAYTHMG Trigger: GCCCATGTGGGTGTAAGCTTCTACAACCAGGCAGGCCAGCACGCACGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR CCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTaGCTGCCATTCTACTCACAAGCCTGCAAACCCAGCGGAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: KDRNVWVQQGKQCPS*LPFYSQACKPSGKH Trigger: GTGCTTTCCGCTGGGTTTGCAGGCTTGTGAGTAGAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR TCA 90 bp | GCTGCGCTGCTTGCAGCTCACTGGCCAGGGAAATCCCAACATGGATaGAGATGCCTGAGAACACAAGGTTCTCACTGTCGTCAACAATCT | + |
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Preference number: 1 (lower is better) Translates to: AALLAAHWPGKSQHG*RCLRTQGSHCRQQS Trigger: AGATTGTTGACGACAGTGAGAACCTTGTGTTCTCAGGCATCTTCATCCATGTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR CCA 90 bp | TTAGGCTGCGCTGCTTGCAGCTCACTGGCCAGGGAAATCCCAACATaGATGAAGATGCCTGAGAACACAAGGTTCTCACTGTCGTCAACA | + |
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Preference number: 1 (lower is better) Translates to: LGCAACSSLAREIPT*MKMPENTRFSLSST Trigger: TGTTGACGACAGTGAGAACCTTGTGTTCTCAGGCATCTTCATCCATGTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR TCA 90 bp | GGCTCTTTCAAATGCCAATCTAGAAAAGATACCAACAGAAATCAATaGCAGAGCCAATCACCAGGCTGCAGGAGCCGTGCGTGCTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: GSFKCQSRKDTNRNQ*QSQSPGCRSRACWP Trigger: AGGCCAGCACGCACGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTTCTAGATTGGCATTTGAAAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR GCA 90 bp | TTTCAAGTATCTTTCTTTGTCCCTTCTTCCTCAACTGAACAACTGTaGCCGGCATGTGATCTAGAATATGAGCCCCACACATGGACCGTT | + |
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Preference number: 1 (lower is better) Translates to: FQVSFFVPSSSTEQL*PACDLEYEPHTWTV Trigger: AACGGTCCATGTGTGGGGCTCATATTCTAGATCACATGCCGGGCACAGTTGTTCAGTTGAGGAAGAAGGGACAAAGAAAGATACTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR CCA 90 bp | GAACACAAGGTTCTCACTGTCGTCAACAATCTTTCTAGGTACCTTTaGATGGTTCTAGCACATTTATCAGACAACGGGGGCAGCAGATTT | + |
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Preference number: 1 (lower is better) Translates to: EHKVLTVVNNLSRYL*MVLAHLSDNGGSRF Trigger: AAATCTGCTGCCCCCGTTGTCTGATAAATGTGCTAGAACCATCCAAAGGTACCTAGAAAGATTGTTGACGACAGTGAGAACCTTGTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR TCA 90 bp | GAGTTTAGCCCATTCTTACAACGTCACAAATGCATGTCTGCATCATaGAAGTTAATAAAGCTAACTTCAGGCAACCAAACCTACATATTT | + |
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Preference number: 1 (lower is better) Translates to: EFSPFLQRHKCMSAS*KLIKLTSGNQTYIF Trigger: AAATATGTAGGTTTGGTTGCCTGAAGTTAGCTTTATTAACTTTCATGATGCAGACATGCATTTGTGACGTTGTAAGAATGGGCTAAACTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTCACTTAGGCTGCGCTGCTTGCAGCTCACTGGCCAGGGAAATCCCAACCCCTTCTTCCTCAACTaGACAACTGTGCCCGGCATG | + |
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Preference number: 2 (lower is better) Translates to: CGSLRLRCLQLTGQGNPNPFFLN*TTVPGM Trigger: CATGCCGGGCACAGTTGTTCAGTTGAGGAAGAAGGG...GTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGCCTAAGTGACCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCTACTCACAAGCCTATGGATGAAGATGCCTaGGAACACAAGGTTCTCACT | + |
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Preference number: 2 (lower is better) Translates to: GFSKESNAPPGCHSTHKPMDEDA*EHKVLT Trigger: AGTGAGAACCTTGTGTTCTCAGGCATCTTCATCCAT...AGGCTTGTGAGTAGAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCTACTCACAAGCCTGCAAAACCAACAGAAATCAATaGCAGAGCCAATCACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QQGKQCPSWLPFYSQACKTNRNQ*QSQSPG Trigger: GCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGT...TTTGCAGGCTTGTGAGTAGAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR TCA 90 bp | GACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCAAATCCCAACATGGATaGAGATGCCTGAGAACACAA | + |
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Preference number: 2 (lower is better) Translates to: DRNVWVQQGKQCPSWLPFKSQHG*RCLRTQ Trigger: TTGTGTTCTCAGGCATCTTCATCCATGTTGGGATTT...GAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTAGGTACCTTTGGATGGTTCTAGCACATTTATCAGACAACGGGGGCAGCTACGACCCAGACTGTTaGAGGGAGAAGTGCACATTA | + |
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Preference number: 2 (lower is better) Translates to: LSRYLWMVLAHLSDNGGSYDPDC*REKCTL Trigger: TAATGTGCACTTCTCCCTCCAACAGTCTGGGTCGTA...GCTGCCCCCGTTGTCTGATAAATGTGCTAGAACCATCCAAAGGTACCTAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR CAA 90 bp | CACATTTATCAGACAACGGGGGCAGCAGATTTCAAGTATCTTTCTTaGTCCCTTCTTCCTCAACTGAACAACTGTGCCCGGCATGTGATC | + |
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Preference number: 2 (lower is better) Translates to: HIYQTTGAADFKYLS*SLLPQLNNCARHVI Trigger: GATCACATGCCGGGCACAGTTGTTCAGTTGAGGAAGAAGGGACAAAGAAAGATACTTGAAATCTGCTGCCCCCGTTGTCTGATAAATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCACTTTCTAGGTACCTTTaGATGGTTCTAGCACATTTA | + |
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Preference number: 2 (lower is better) Translates to: KDRNVWVQQGKQCPSWLPLSRYL*MVLAHL Trigger: TAAATGTGCTAGAACCATCCAAAGGTACCTAGAAAG...TGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR CAA 90 bp | GTGAAATATAAAACAGCCATCCTTCTCTCCCCTTGTTTCCAACAGTaGCTCAAACACCCTGTTAAGGCAAGGACAGAAATGTGTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: VKYKTAILLSPCFQQ*LKHPVKARTEMCGF Trigger: GAACCCACACATTTCTGTCCTTGCCTTAACAGGGTGTTTGAGCAACTGTTGGAAACAAGGGGAGAGAAGGATGGCTGTTTTATATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR GCA 90 bp | AAAAGATACCAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGAGCCGTGTTGGAGGGAGAAGTaGACATTAATTGAGTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: KRYQQKSMTEPITRLQEPCWREK*TLIEFS Trigger: GCTAAACTCAATTAATGTGCACTTCTCCCTCCAACA...CGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR GCA 72 bp | TCAATGACAGAGCCAATCACCAGGCTGCAGGAGCCGTaGGTGCTGGCCTGCCTGGTTGTAGAAGCTTACACC | + |
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Preference number: 3 (lower is better) Translates to: SMTEPITRLQEP*VLACLVVEAYT Trigger: GGTGTAAGCTTCTACAACCAGGCAGGCCAGCACGCACGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR GCA 72 bp | CAATGCCCCTCCTGGCTGCCATTCTACTCACAAGCCTaGAAACCCAGCGGAAAGCACAGCAATCTACCCACA | + |
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Preference number: 3 (lower is better) Translates to: QCPSWLPFYSQA*KPSGKHSNLPT Trigger: TGTGGGTAGATTGCTGTGCTTTCCGCTGGGTTTGCAGGCTTGTGAGTAGAATGGCAGCCAGGAGGGGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR GCA 72 bp | ATTAATGTGTGTGTGGGTCACTTAGGCTGCGCTGCTTaGAGCTCACTGGCCAGGGAAATCCCAACATGGATG | + |
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Preference number: 3 (lower is better) Translates to: INVCVGHLGCAA*SSLAREIPTWM Trigger: CATCCATGTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGCCTAAGTGACCCACACACACATTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR-3UTR CAA 90 bp | GGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTATACGACCCAGACTGTaGGAGGGAGAAGTGCACATT | + |
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Preference number: 3 (lower is better) Translates to: GQKCVGSARKAMPLLAAIIRPRL*EGEVHI Trigger: AATGTGCACTTCTCCCTCCAACAGTCTGGGTCGTAT...AATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR GCA 72 bp | TCTTTCTTTGTCCCTTCTTCCTCAACTGAACAACTGTaGCCGGCATGTGATCTAGAATATGAGCCCCACACA | + |
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Preference number: 3 (lower is better) Translates to: SFFVPSSSTEQL*PACDLEYEPHT Trigger: TGTGTGGGGCTCATATTCTAGATCACATGCCGGGCACAGTTGTTCAGTTGAGGAAGAAGGGACAAAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR GCA 72 bp | AAACAGCCATCCTTCTCTCCCCTTGTTTCCAACAGTTaGTCAAACACCCTGTTAAGGCAAGGACAGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: KQPSFSPLVSNS*SNTLLRQGQKC Trigger: ACATTTCTGTCCTTGCCTTAACAGGGTGTTTGAGCAACTGTTGGAAACAAGGGGAGAGAAGGATGGCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| 3UTR CCA 72 bp | GTTCTCACTGTCGTCAACAATCTTTCTAGGTACCTTTaGATGGTTCTAGCACATTTATCAGACAACGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: VLTVVNNLSRYL*MVLAHLSDNGG Trigger: GCCCCCGTTGTCTGATAAATGTGCTAGAACCATCCAAAGGTACCTAGAAAGATTGTTGACGACAGTGAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR TCA 90 bp | TGTGGGTCACTTAGGCTGCGCTGCTTGCAGCTCACTGGCCAGGGAAATCCCAACCGCTCTTCCTCCCCTTaGCGTATGGCAGGAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: CGSLRLRCLQLTGQGNPNRSSSP*RMAGAC Trigger: GCACGCTCCTGCCATACGTCAAGGGGAGGAAGAGCG...GTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGCCTAAGTGACCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR TCA 90 bp | AATGACAGAGCCAATCACCAGGCTGCAGGAGCCGTGCGTGCTGGCCTGCCTGGTAATCTCTTGCACAGGTaGGAAAGCGCTGGTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: NDRANHQAAGAVRAGLPGNLLHR*ESAGQH Trigger: ATGCTGACCAGCGCTTTCTCACCTGTGCAAGAGATT...ACCAGGCAGGCCAGCACGCACGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | GGTCACTTAGGCTGCGCTGCTTGCAGCTCACTGGCCAGGGAAATCCCAACATGGGCCCTCCGAGTTCACTaGGGGACGTCTGAAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: GHLGCAACSSLAREIPTWALRVH*GTSEST Trigger: TGTACTTTCAGACGTCCCGCAGTGAACTCGGAGGGC...CCATGTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGCCTAAGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCACGTATGGCAGGAGCGTaGGCAGCTGCTCACAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KDRNVWVQQGKQCPSWLPRMAGA*AAAHSK Trigger: CTTGCTGTGAGCAGCTGCGCACGCTCCTGCCATACG...TGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | GGTCACTTAGGCTGCGCTGCTTGCAGCTCACTGGCCAGGGAAATCCCAACATGGATTTGTCCTGGCAGCTaGCTCATGGGGAGAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: GHLGCAACSSLAREIPTWICPGS*LMGRDS Trigger: ACTGTCTCTCCCCATGAGGCAGCTGCCAGGACAAAT...CCATGTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGCCTAAGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | GGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCTACTCACAAGCCTGGAATCCACGAAAGATaGTGGCTGAGGCAGCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: GFSKESNAPPGCHSTHKPGIHER*WLRQRE Trigger: CTCGCGCTGCCTCAGCCAGCATCTTTCGTGGATTCC...AGGCTTGTGAGTAGAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | CAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCTACTCACAAGCCTGCAAATGGCTGACCTCTCACTaGTCCCTCCAAAGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QQGKQCPSWLPFYSQACKWLTSH*SLQSSS Trigger: GGAGGAGCTTTGGAGGGAGCAGTGAGAGGTCAGCCA...TTTGCAGGCTTGTGAGTAGAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCAGCAGTTGGGACTGGTTaGGCGTGCTGGGCAAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: KDRNVWVQQGKQCPSWLPAVGTG*ACWAKH Trigger: ATGCTTTGCCCAGCACGCCCAACCAGTCCCAACTGC...TGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | GACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCACTGTCGTGAGGCTGTaGAGATGGCAGAGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DRNVWVQQGKQCPSWLPFTVVRL*RWQSRW Trigger: CCACCTGCTCTGCCATCTCCACAGCCTCACGACAGT...GAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | GGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTTCAGAGATCGGGCTGTaGTGGGGACGCGAGTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: GQKCVGSARKAMPLLAAISEIGL*WGRESY Trigger: ATAAGACTCGCGTCCCCAGCACAGCCCGATCTCTGA...AATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | GGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCTCCTGCAGCAGTCATaGAATACACGTTCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GQKCVGSARKAMPLLAAILLQQS*NTRSGP Trigger: GGGGCCTGAACGTGTATTCCATGACTGCTGCAGGAG...AATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCACTGGCAGCTGCCTCATaGGGAGAGACAGTTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KDRNVWVQQGKQCPSWLPLAAAS*GETVPE Trigger: TTCTGGAACTGTCTCTCCCCATGAGGCAGCTGCCAG...TGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTAGGTACCTTTGGATGGTTCTAGCACATTTATCAGACAACGGGGGCAGCCTGGCTGCAAGCTCATaGCCCGGAGTGCACAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSRYLWMVLAHLSDNGGSLAASS*PGVHRQ Trigger: CTGCCTGTGCACTCCGGGCCATGAGCTTGCAGCCAG...GCTGCCCCCGTTGTCTGATAAATGTGCTAGAACCATCCAAAGGTACCTAGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR TCA 90 bp | TGTGGGTCACTTAGGCTGCGCTGCTTGCAGCTCACTGGCCAGGGAAATCCCAACCAGCTTTTCTTTGGTTaGGTGAAGAAAAGACGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CGSLRLRCLQLTGQGNPNQLFFG*VKKRRL Trigger: CAGGCGTCTTTTCTTCACTCAACCAAAGAAAAGCTG...GTTGGGATTTCCCTGGCCAGTGAGCTGCAAGCAGCGCAGCCTAAGTGACCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCAAACTTGGCAGCCTCCTaGTCCTCTGCAGTTAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: KDRNVWVQQGKQCPSWLPNLAAS*SSAVRV Trigger: CACTCTAACTGCAGAGGAGCAGGAGGCTGCCAAGTT...TGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | AATGACAGAGCCAATCACCAGGCTGCAGGAGCCGTGCGTGCTGGCCTGCCTGGTTGGGTGGCAAATAAGTaGAAATGTTCTGATTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NDRANHQAAGAVRAGLPGWVANK*KCSDLS Trigger: GGACAAATCAGAACATTTCCACTTATTTGCCACCCA...ACCAGGCAGGCCAGCACGCACGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCAGTGCTGGGCAAAGCATaGCATTGCAGTGCTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KDRNVWVQQGKQCPSWLPVLGKA*HCSAEE Trigger: TTCCTCAGCACTGCAATGCCATGCTTTGCCCAGCAC...TGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTAGGTACCTTTGGATGGTTCTAGCACATTTATCAGACAACGGGGGCAGCCTCGGAAACAGAGCCTaGCTGACCTCTCACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSRYLWMVLAHLSDNGGSLGNRA*LTSHCS Trigger: GGAGCAGTGAGAGGTCAGCCAGGCTCTGTTTCCGAG...GCTGCCCCCGTTGTCTGATAAATGTGCTAGAACCATCCAAAGGTACCTAGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | AAAAGATACCAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGAGCCGAGATGGCAGAGCAGGTaGCTGAGAGGCCTGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: KRYQQKSMTEPITRLQEPRWQSR*LRGLVI Trigger: GATCACCAGGCCTCTCAGCCACCTGCTCTGCCATCT...CGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | CTAGAAAAGATACCAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGAAGATTTACTCTGCCCTaGCCAGGCCTCCGGCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: LEKIPTEINDRANHQAAGRFTLP*PGLRPS Trigger: GCTAGGCCGGAGGCCTGGGCAGGGCAGAGTAAATCT...TCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | GGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCTACTCACAAGCCTGTGTATTTGACAGAGTaGAAGGAATTCAGAGATCGG | + |
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Preference number: 4 (lower is better) Translates to: GFSKESNAPPGCHSTHKPVYLTE*KEFRDR Trigger: CCGATCTCTGAATTCCTTCCACTCTGTCAAATACAC...AGGCTTGTGAGTAGAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | AAAAGATACCAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGAGCCGTGTTCTGATTTGTCCTaGCAGCTGCCTCATGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: KRYQQKSMTEPITRLQEPCSDLS*QLPHGE Trigger: CTCCCCATGAGGCAGCTGCCAGGACAAATCAGAACA...CGGCTCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR TCA 90 bp | GACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTCTTTTCTTTGGTTGAGTaGAGAAAAGACGCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRNVWVQQGKQCPSWLPFFSLVE*RKDACL Trigger: CAAACAGGCGTCTTTTCTTCACTCAACCAAAGAAAA...GAATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | GGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCATTGTCTCAGCTTTTCTTTaGTTGAGTGAAGAAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: GQKCVGSARKAMPLLAAIVSAFL*LSEEKT Trigger: CGTCTTTTCTTCACTCAACCAAAGAAAAGCTGAGAC...AATGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CCA 90 bp | CTAGAAAAGATACCAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGAAAGCGCTGGTCAGCATaGCATCTTCCCTCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LEKIPTEINDRANHQAAGKRWSA*HLPSVM Trigger: CATCACAGAGGGAAGATGCCATGCTGACCAGCGCTT...TCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS-3UTR TCA 90 bp | AAGGACAGAAATGTGTGGGTTCAGCAAGGAAAGCAATGCCCCTCCTGGCTGCCACCATATCCGTATTTGTaGAATACGTTTTCCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KDRNVWVQQGKQCPSWLPPYPYL*NTFSSS Trigger: ACTACTGGAAAACGTATTTCACAAATACGGATATGG...TGGCAGCCAGGAGGGGCATTGCTTTCCTTGCTGAACCCACACATTTCTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | CTGGTTGTAGAAGCTTACACCCACATGGGCCTTCTTTGTAGTATGGTTTTCACACTCCAAAGCTCCTCCTaGAGCAGTCATGGAATACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVVEAYTHMGLLCSMVFTLQSSS*SSHGIH Trigger: GTGTATTCCATGACTGCTGCAGGAGGAGCTTTGGAG...TGTGAAAACCATACTACAAAGAAGGCCCATGTGGGTGTAAGCTTCTACAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| 3UTR CAA 72 bp | AAAACAGCCATCCTTCTCTCCCCTTGTTTCCAACAGTaGCTCAAACACCCTGTTAAGGCAAGGACAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KTAILLSPCFQQ*LKHPVKARTEM Trigger: CATTTCTGTCCTTGCCTTAACAGGGTGTTTGAGCAACTGTTGGAAACAAGGGGAGAGAAGGATGGCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTAGGTACCTTTGGATGGTTCTAGCACATTTATCAGACAACGGGGGCAGCTTCCAGAAGTGTATTTaGCAGAGTGGAAGGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRYLWMVLAHLSDNGGSFQKCI*QSGRNS Trigger: TGAATTCCTTCCACTCTGTCAAATACACTTCTGGAA...GCTGCCCCCGTTGTCTGATAAATGTGCTAGAACCATCCAAAGGTACCTAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS-3UTR CCA 90 bp | TTCACAGTAACGTCACAATTACTTTTTGGTAGAATTAATGTGTGTGTGGGTCACCTTCCCTCTGTGATGTaGCTGAGAATGGAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FTVTSQLLFGRINVCVGHLPSVM*LRMEGT Trigger: TGTTCCTTCCATTCTCAGCCACATCACAGAGGGAAG...GTGACCCACACACACATTAATTCTACCAAAAAGTAATTGTGACGTTACTGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS-3UTR GCA 90 bp | TTCACAGTAACGTCACAATTACTTTTTGGTAGAATTAATGTGTGTGTGGGTCACCTAGGAAAGAATTTCTaGATAGAGCCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTVTSQLLFGRINVCVGHLGKNF*IEPARK Trigger: CTTCCTGGCTGGCTCTATGCAGAAATTCTTTCCTAG...GTGACCCACACACACATTAATTCTACCAAAAAGTAATTGTGACGTTACTGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR GCA 90 bp | TTCACAGTAACGTCACAATTACTTTTTGGTAGAATTAATGTGTGTGTGGGTCACGAAAAGACGCCTGTTTaGTTTTGTCTAGACTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: FTVTSQLLFGRINVCVGHEKTPV*FCLDST Trigger: TGTCGAGTCTAGACAAAAGCAAACAGGCGTCTTTTC...GTGACCCACACACACATTAATTCTACCAAAAAGTAATTGTGACGTTACTGTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS-3UTR TCA 90 bp | CATGTCTGCATCATGAAAGTTAATAAAGCTAACTTCAGGCAACCAAACCTACATGTCAGCTCCATATTCTaGAACATAGCCTTTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HVCIMKVNKANFRQPNLHVSSIF*NIAFKS Trigger: AGACTTAAAGGCTATGTTTCAGAATATGGAGCTGAC...ATGTAGGTTTGGTTGCCTGAAGTTAGCTTTATTAACTTTCATGATGCAGACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 90 bp | CGAAAGATGCTGGCTGAGGCAGCGCGAGAACTGGCTGCAAGCTCATaGCCCGGAGTGCACAGGCAGTTGGGACTGGTTGGGCGTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKMLAEAARELAASS*PGVHRQLGLVGRAG Trigger: CCCAGCACGCCCAACCAGTCCCAACTGCCTGTGCACTCCGGGCCATGAGCTTGCAGCCAGTTCTCGCGCTGCCTCAGCCAGCATCTTTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 90 bp | AGGCCTGGTGATCCGAAGCTGACGCCGCACGGAATCCACGAAAGATaGTGGCTGAGGCAGCGCGAGAACTGGCTGCAAGCTCATGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPGDPKLTPHGIHER*WLRQRENWLQAHGP Trigger: CGGGCCATGAGCTTGCAGCCAGTTCTCGCGCTGCCTCAGCCAGCATCTTTCGTGGATTCCGTGCGGCGTCAGCTTCGGATCACCAGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS CCA 90 bp | GCTGACCTCTCACTGCTCCCTCCAAAGCTCCTCCTGCAGCAGTCATaGAATACACGTTCAGGCCCCGATCAGCCAGGAGCTGAATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ADLSLLPPKLLLQQS*NTRSGPDQPGAESL Trigger: AAGAGATTCAGCTCCTGGCTGATCGGGGCCTGAACGTGTATTCCATGACTGCTGCAGGAGGAGCTTTGGAGGGAGCAGTGAGAGGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS TCA 90 bp | AGACTCCCGGACCTGCTTCACATAATCAACTGTGGCCTCGATAACTaGTGCCACATCGCTCTTCCTCCCCTTGACGTATGGCAGGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLPDLLHIINCGLDN*CHIALPPLDVWQER Trigger: ACGCTCCTGCCATACGTCAAGGGGAGGAAGAGCGATGTGGCATCAGTTATCGAGGCCACAGTTGATTATGTGAAGCAGGTCCGGGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 90 bp | CCCGATCAGCCAGGAGCTGAATCTCTTGCACAGGTGAGAAAGCGCTaGTCAGCATGGCATCTTCCCTCTGTGATGTGGCTGAGAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PDQPGAESLAQVRKR*SAWHLPSVMWLRME Trigger: TTCCATTCTCAGCCACATCACAGAGGGAAGATGCCATGCTGACCAGCGCTTTCTCACCTGTGCAAGAGATTCAGCTCCTGGCTGATCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 90 bp | ATCCTCAATAGAGCTCTCGGAAACAGAGCCTGGCTGACCTCTCACTaGTCCCTCCAAAGCTCCTCCTGCAGCAGTCATGGAATACACGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILNRALGNRAWLTSH*SLQSSSCSSHGIHV Trigger: AACGTGTATTCCATGACTGCTGCAGGAGGAGCTTTGGAGGGAGCAGTGAGAGGTCAGCCAGGCTCTGTTTCCGAGAGCTCTATTGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 90 bp | CCAGGAGCTGAATCTCTTGCACAGGTGAGAAAGCGCTGGTCAGCATaGCATCTTCCCTCTGTGATGTGGCTGAGAATGGAAGGAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGAESLAQVRKRWSA*HLPSVMWLRMEGTA Trigger: AGCTGTTCCTTCCATTCTCAGCCACATCACAGAGGGAAGATGCCATGCTGACCAGCGCTTTCTCACCTGTGCAAGAGATTCAGCTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 90 bp | CCTTCTATTGTTCTGAATGGCTTCTGTAACCTGGGCCATAATGGCTaGAGAGAGAGACTCCCGGACCTGCTTCACATAATCAACTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSIVLNGFCNLGHNG*RERLPDLLHIINCG Trigger: GCCACAGTTGATTATGTGAAGCAGGTCCGGGAGTCTCTCTCTCCAGCCATTATGGCCCAGGTTACAGAAGCCATTCAGAACAATAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS-3UTR CAA 90 bp | CTAGAAAAGATACCAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGACAGCCAGGAAGTATCTaGTGGCATCTCCAACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEKIPTEINDRANHQAAGQPGSI*WHLQPA Trigger: TGCTGGTTGGAGATGCCACAAGATACTTCCTGGCTG...TCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CAA 90 bp | CTAGAAAAGATACCAACAGAAATCAATGACAGAGCCAATCACCAGGCTGCAGGAGCGACCTTCTTCACATaGCTGATGGTCAGGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LEKIPTEINDRANHQAAGATFFT*LMVRVI Trigger: GATCACCCTGACCATCAGCAATGTGAAGAAGGTCGC...TCCTGCAGCCTGGTGATTGGCTCTGTCATTGATTTCTGTTGGTATCTTTTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS-3UTR CAA 90 bp | TTCACAGTAACGTCACAATTACTTTTTGGTAGAATTAATGTGTGTGTGGGTCACGGAGTGCACAGGCAGTaGGGACTGGTTGGGCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTVTSQLLFGRINVCVGHGVHRQ*GLVGRA Trigger: AGCACGCCCAACCAGTCCCAACTGCCTGTGCACTCC...GTGACCCACACACACATTAATTCTACCAAAAAGTAATTGTGACGTTACTGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS TCA 90 bp | AACAGCTCGATGGGCATCTGTCTCTTAGAAAACCTTCTATTGTTCTaGATGGCTTCTGTAACCTGGGCCATAATGGCTGGAGAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSSMGICLLENLLLF*MASVTWAIMAGERD Trigger: GTCTCTCTCTCCAGCCATTATGGCCCAGGTTACAGAAGCCATTCAGAACAATAGAAGGTTTTCTAAGAGACAGATGCCCATCGAGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 90 bp | TGTGTGTTTTTCTTCTTGCCAGATCTAATTAACTTGGCAGCCTCCTaGTCCTCTGCAGTTAGAGTGGAAGTCACCTTCAAGAAAATTATG | + |
|
Preference number: 5 (lower is better) Translates to: CVFFFLPDLINLAAS*SSAVRVEVTFKKIM Trigger: CATAATTTTCTTGAAGGTGACTTCCACTCTAACTGCAGAGGAGCAGGAGGCTGCCAAGTTAATTAGATCTGGCAAGAAGAAAAACACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS-3UTR CAA 90 bp | TTCACAGTAACGTCACAATTACTTTTTGGTAGAATTAATGTGTGTGTGGGTCACCCAGATCTAATTAACTaGGCAGCCTCCTGCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FTVTSQLLFGRINVCVGHPDLIN*AASCSS Trigger: AGAGGAGCAGGAGGCTGCCAAGTTAATTAGATCTGG...GTGACCCACACACACATTAATTCTACCAAAAAGTAATTGTGACGTTACTGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | CTGGCTGAGGCAGCGCGAGAACTGGCTGCAAGCTCATaGCCCGGAGTGCACAGGCAGTTGGGACTGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAEAARELAASS*PGVHRQLGLVG Trigger: CCCAACCAGTCCCAACTGCCTGTGCACTCCGGGCCATGAGCTTGCAGCCAGTTCTCGCGCTGCCTCAGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CAA 72 bp | CTGGCTGCAAGCTCATGGCCCGGAGTGCACAGGCAGTaGGGACTGGTTGGGCGTGCTGGGCAAAGCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAASSWPGVHRQ*GLVGRAGQSMA Trigger: TGCCATGCTTTGCCCAGCACGCCCAACCAGTCCCAACTGCCTGTGCACTCCGGGCCATGAGCTTGCAGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | CTCATGGCCCGGAGTGCACAGGCAGTTGGGACTGGTTaGGCGTGCTGGGCAAAGCATGGCATTGCAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LMARSAQAVGTG*ACWAKHGIAVL Trigger: CAGCACTGCAATGCCATGCTTTGCCCAGCACGCCCAACCAGTCCCAACTGCCTGTGCACTCCGGGCCATGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | TGGCTGCAAGCTCATGGCCCGGAGTGCACAGGCAGTTaGGACTGGTTGGGCGTGCTGGGCAAAGCATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: WLQAHGPECTGS*DWLGVLGKAWH Trigger: ATGCCATGCTTTGCCCAGCACGCCCAACCAGTCCCAACTGCCTGTGCACTCCGGGCCATGAGCTTGCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CAA 72 bp | GCTCATGGCCCGGAGTGCACAGGCAGTTGGGACTGGTaGGGCGTGCTGGGCAAAGCATGGCATTGCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHGPECTGSWDW*GVLGKAWHCSA Trigger: AGCACTGCAATGCCATGCTTTGCCCAGCACGCCCAACCAGTCCCAACTGCCTGTGCACTCCGGGCCATGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 72 bp | GATCCGAAGCTGACGCCGCACGGAATCCACGAAAGATaGTGGCTGAGGCAGCGCGAGAACTGGCTGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DPKLTPHGIHER*WLRQRENWLQA Trigger: AGCTTGCAGCCAGTTCTCGCGCTGCCTCAGCCAGCATCTTTCGTGGATTCCGTGCGGCGTCAGCTTCGGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | CAAGCTCATGGCCCGGAGTGCACAGGCAGTTGGGACTaGTTGGGCGTGCTGGGCAAAGCATGGCATTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QAHGPECTGSWD*LGVLGKAWHCS Trigger: ACTGCAATGCCATGCTTTGCCCAGCACGCCCAACCAGTCCCAACTGCCTGTGCACTCCGGGCCATGAGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | ATCCACGAAAGATGCTGGCTGAGGCAGCGCGAGAACTaGCTGCAAGCTCATGGCCCGGAGTGCACAGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: IHERCWLRQREN*LQAHGPECTGS Trigger: ACTGCCTGTGCACTCCGGGCCATGAGCTTGCAGCCAGTTCTCGCGCTGCCTCAGCCAGCATCTTTCGTGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | CCGAAGCTGACGCCGCACGGAATCCACGAAAGATGCTaGCTGAGGCAGCGCGAGAACTGGCTGCAAGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PKLTPHGIHERC*LRQRENWLQAH Trigger: ATGAGCTTGCAGCCAGTTCTCGCGCTGCCTCAGCCAGCATCTTTCGTGGATTCCGTGCGGCGTCAGCTTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 72 bp | GTGGCATCTCCAACCAGCAAAAGATTTACTCTGCCCTaGCCAGGCCTCCGGCCTAGCTCCCCAGTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: VASPTSKRFTLP*PGLRPSSPVLI Trigger: GATCAGCACTGGGGAGCTAGGCCGGAGGCCTGGGCAGGGCAGAGTAAATCTTTTGCTGGTTGGAGATGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CAA 72 bp | GCCTCGATAACTGATGCCACATCGCTCTTCCTCCCCTaGACGTATGGCAGGAGCGTGCGCAGCTGCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ASITDATSLFLP*TYGRSVRSCSQ Trigger: CTGTGAGCAGCTGCGCACGCTCCTGCCATACGTCAAGGGGAGGAAGAGCGATGTGGCATCAGTTATCGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 72 bp | ATCTTGTGGCATCTCCAACCAGCAAAAGATTTACTCTaGCCTGCCCAGGCCTCCGGCCTAGCTCCCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ILWHLQPAKDLL*PAQASGLAPQC Trigger: GCACTGGGGAGCTAGGCCGGAGGCCTGGGCAGGGCAGAGTAAATCTTTTGCTGGTTGGAGATGCCACAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 72 bp | TGGCTGACCTCTCACTGCTCCCTCCAAAGCTCCTCCTaGAGCAGTCATGGAATACACGTTCAGGCCCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: WLTSHCSLQSSS*SSHGIHVQAPI Trigger: GATCGGGGCCTGAACGTGTATTCCATGACTGCTGCAGGAGGAGCTTTGGAGGGAGCAGTGAGAGGTCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | TCACTGCTCCCTCCAAAGCTCCTCCTGCAGCAGTCATaGAATACACGTTCAGGCCCCGATCAGCCAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLPPKLLLQQS*NTRSGPDQPGA Trigger: AGCTCCTGGCTGATCGGGGCCTGAACGTGTATTCCATGACTGCTGCAGGAGGAGCTTTGGAGGGAGCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CAA 90 bp | TCAACTGTGGCCTCGATAACTGATGCCACATCGCTCTTCCTCCCCTaGACGTATGGCAGGAGCGTGCGCAGCTGCTCACAGCAAGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: STVASITDATSLFLP*TYGRSVRSCSQQDL Trigger: CAAGTCTTGCTGTGAGCAGCTGCGCACGCTCCTGCCATACGTCAAGGGGAGGAAGAGCGATGTGGCATCAGTTATCGAGGCCACAGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS TCA 72 bp | ATGGAATACACGTTCAGGCCCCGATCAGCCAGGAGCTaGATCTCTTGCACAGGTGAGAAAGCGCTGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MEYTFRPRSARS*ISCTGEKALVS Trigger: GCTGACCAGCGCTTTCTCACCTGTGCAAGAGATTCAGCTCCTGGCTGATCGGGGCCTGAACGTGTATTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS TCA 72 bp | AGATCCTCAATAGAGCTCTCGGAAACAGAGCCTGGCTaGCCTCTCACTGCTCCCTCCAAAGCTCCTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSSIELSETEPG*PLTAPSKAPPA Trigger: TGCAGGAGGAGCTTTGGAGGGAGCAGTGAGAGGTCAGCCAGGCTCTGTTTCCGAGAGCTCTATTGAGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS CCA 72 bp | CCAGGAGCTGAATCTCTTGCACAGGTGAGAAAGCGCTaGTCAGCATGGCATCTTCCCTCTGTGATGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGAESLAQVRKR*SAWHLPSVMWL Trigger: CAGCCACATCACAGAGGGAAGATGCCATGCTGACCAGCGCTTTCTCACCTGTGCAAGAGATTCAGCTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS CCA 72 bp | AAGCGCTGGTCAGCATGGCATCTTCCCTCTGTGATGTaGCTGAGAATGGAAGGAACAGCTCGATGGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: KRWSAWHLPSVM*LRMEGTARWAS Trigger: AGATGCCCATCGAGCTGTTCCTTCCATTCTCAGCCACATCACAGAGGGAAGATGCCATGCTGACCAGCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS CCA 72 bp | ATACAGATCCTCAATAGAGCTCTCGGAAACAGAGCCTaGCTGACCTCTCACTGCTCCCTCCAAAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IQILNRALGNRA*LTSHCSLQSSS Trigger: GGAGGAGCTTTGGAGGGAGCAGTGAGAGGTCAGCCAGGCTCTGTTTCCGAGAGCTCTATTGAGGATCTGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS TCA 72 bp | ATGGCAGGAGCGTGCGCAGCTGCTCACAGCAAGACTTaGTGCGTTCTCGTCTCAGCTTTTCTTTGGTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: MAGACAAAHSKT*CVLVSAFLWLS Trigger: ACTCAACCAAAGAAAAGCTGAGACGAGAACGCATCAAGTCTTGCTGTGAGCAGCTGCGCACGCTCCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | TGGGGAGAGACAGTTCCAGAAGTGTATTTGACAGAGTaGAAGGAATTCAGAGATCGGGCTGTGCTGGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: WGETVPEVYLTE*KEFRDRAVLGT Trigger: CGTCCCCAGCACAGCCCGATCTCTGAATTCCTTCCACTCTGTCAAATACACTTCTGGAACTGTCTCTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS CAA 72 bp | TATGGCAGGAGCGTGCGCAGCTGCTCACAGCAAGACTaGATGCGTTCTCGTCTCAGCTTTTCTTTGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: YGRSVRSCSQQD*MRSRLSFSLVE Trigger: CTCAACCAAAGAAAAGCTGAGACGAGAACGCATCAAGTCTTGCTGTGAGCAGCTGCGCACGCTCCTGCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS CAA 90 bp | ACACACTGGGTGCAGTGGGTGGCAAATAAGTGGAAATGTTCTGATTaGTCCTGGCAGCTGCCTCATGGGGAGAGACAGTTCCAGAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: THWVQWVANKWKCSD*SWQLPHGERQFQKC Trigger: ACACTTCTGGAACTGTCTCTCCCCATGAGGCAGCTGCCAGGACAAATCAGAACATTTCCACTTATTTGCCACCCACTGCACCCAGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
||
| CDS TCA 72 bp | GACCTGCTTCACATAATCAACTGTGGCCTCGATAACTaGTGCCACATCGCTCTTCCTCCCCTTGACGTATGG | + |
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Preference number: 6 (lower is better) Translates to: DLLHIINCGLDN*CHIALPPLDVW Trigger: CCATACGTCAAGGGGAGGAAGAGCGATGTGGCATCAGTTATCGAGGCCACAGTTGATTATGTGAAGCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | GAATCTCTTGCACAGGTGAGAAAGCGCTGGTCAGCATaGCATCTTCCCTCTGTGATGTGGCTGAGAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: ESLAQVRKRWSA*HLPSVMWLRME Trigger: TTCCATTCTCAGCCACATCACAGAGGGAAGATGCCATGCTGACCAGCGCTTTCTCACCTGTGCAAGAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CAA 72 bp | GTGCAGTGGGTGGCAAATAAGTGGAAATGTTCTGATTaGTCCTGGCAGCTGCCTCATGGGGAGAGACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VQWVANKWKCSD*SWQLPHGERQF Trigger: GAACTGTCTCTCCCCATGAGGCAGCTGCCAGGACAAATCAGAACATTTCCACTTATTTGCCACCCACTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS CCA 72 bp | AGTTGGACACACTGGGTGCAGTGGGTGGCAAATAAGTaGAAATGTTCTGATTTGTCCTGGCAGCTGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SWTHWVQWVANK*KCSDLSWQLPH Trigger: ATGAGGCAGCTGCCAGGACAAATCAGAACATTTCCACTTATTTGCCACCCACTGCACCCAGTGTGTCCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 72 bp | GTCAGGGTGATCTGTGCTGTGCTAGGAAAGAATTTCTaGATAGAGCCAGCCAGGAAGTATCTTGTGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: VRVICAVLGKNF*IEPARKYLVAS Trigger: AGATGCCACAAGATACTTCCTGGCTGGCTCTATGCAGAAATTCTTTCCTAGCACAGCACAGATCACCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 72 bp | GACCTTCTTCACATTGCTGATGGTCAGGGTGATCTGTaGTGTGCTAGGAAAGAATTTCTGCATAGAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: DLLHIADGQGDL*CARKEFLHRAS Trigger: GCTGGCTCTATGCAGAAATTCTTTCCTAGCACAGCACAGATCACCCTGACCATCAGCAATGTGAAGAAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS TCA 72 bp | ATGGGCATCTGTCTCTTAGAAAACCTTCTATTGTTCTaGATGGCTTCTGTAACCTGGGCCATAATGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: MGICLLENLLLF*MASVTWAIMAG Trigger: TCCAGCCATTATGGCCCAGGTTACAGAAGCCATTCAGAACAATAGAAGGTTTTCTAAGAGACAGATGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS GCA 72 bp | CAAATAAGTGGAAATGTTCTGATTTGTCCTGGCAGCTaGCTCATGGGGAGAGACAGTTCCAGAAGTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: QISGNVLICPGS*LMGRDSSRSVF Trigger: AAATACACTTCTGGAACTGTCTCTCCCCATGAGGCAGCTGCCAGGACAAATCAGAACATTTCCACTTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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| CDS TCA 72 bp | CAGCGGCTCACTGAAACTAATGTCAGCTCCATATTCTaGAACATAGCCTTTAAGTCTTTCAGGTATTACAAA | + |
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Preference number: 6 (lower is better) Translates to: QRLTETNVSSIF*NIAFKSFRYYK Trigger: TTTGTAATACCTGAAAGACTTAAAGGCTATGTTTCAGAATATGGAGCTGACATTAGTTTCAGTGAGCCGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029369.5 |
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