Pregenerated sensors for SOHLH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059625Ensembl transcript IDs: ENSMUST00000076989.7
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCCACTCACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTaGAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: TPLTALPGSLKLGLS*KPSPKYNTQAQDSS Trigger: GGAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTGAGTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| 3UTR GCA 72 bp | ACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTaGAAACCAAGCCCAAAATACAACACCCAGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: TALPGSLKLGLS*KPSPKYNTQAQ Trigger: CTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | CACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAGGGCTGGGCCTCCTCTaGCCTCCACCGACCCCAACC | + |
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Preference number: 4 (lower is better) Translates to: HSPARLPQIRPQLQTKPKGLGLL*PPPTPT Trigger: GGTTGGGGTCGGTGGAGGGCAGAGGAGGCCCAGCCC...TTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | ACTCACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCGCTCCTGGCAAGGGCTaGGCCTCCTCTGCCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: THSPARLPQIRPQLQTKPAPGKG*ASSALH Trigger: GTGGAGGGCAGAGGAGGCCCAGCCCTTGCCAGGAGC...GGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | ACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAACCACTGGGCTGCTCCTaGCAAGGGCTGGGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TALPGSLKLGLSCKPSPKPLGCS*QGLGLL Trigger: GAGGAGGCCCAGCCCTTGCCAGGAGCAGCCCAGTGG...TTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR TCA 90 bp | CACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAAGTGGCTGGCTGCCATaGGTGAGGGATCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HSPARLPQIRPQLQTKPKSGWLP*VRDPGW Trigger: CCACCCTGGATCCCTCACTCATGGCAGCCAGCCACT...TTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | CCACTCACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCATCTCCAGGACAGATaGCATGTCCTCCCGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLTALPGSLKLGLSCKPSHLQDR*HVLPSA Trigger: GGCCGACGGGAGGACATGGCATCTGTCCTGGAGATG...GCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | ACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAACACCACATCGGACCCTaGCCCTGTGGTGTACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TALPGSLKLGLSCKPSPKHHIGP*PCGVPG Trigger: GCCAGGTACACCACAGGGGCAGGGTCCGATGTGGTG...TTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | ACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAACGGACCCTGCCCCTGTaGTGTACCTGGCATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TALPGSLKLGLSCKPSPKRTLPL*CTWHQA Trigger: TGCCTGATGCCAGGTACACCACAGGGGCAGGGTCCG...TTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | AAACCACTTTCCTCTTTAATACAAACTCCACTCACAGCCCTGCCAGGCTCCCTCCCCCATCCACTGGGCTaGTCCTGGCAAGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KPLSSLIQTPLTALPGSLPHPLG*SWQGLG Trigger: GCCCAGCCCTTGCCAGGAGCAGCCCAGTGGATGGGG...GAGGGAGCCTGGCAGGGCTGTGAGTGGAGTTTGTATTAAAGAGGAAAGTGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | ACTCACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCATGCCAAGACCAAGTTaGCCTCCTCAGCCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: THSPARLPQIRPQLQTKPMPRPS*PPQPAC Trigger: GCATGCTGGCTGAGGAGGCCAACTTGGTCTTGGCAT...GGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR TCA 90 bp | AAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACGCTGGCTGCCATGAGTaGGGGATCCAGGGTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KLGLSCKPSPKYNTQAQDAGCHE*GIQGGS Trigger: GCTCCCACCCTGGATCCCTCACTCATGGCAGCCAGC...GTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR TCA 90 bp | TCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGCTCCCCAGGGATGCCACCTGGTGTaGCCCACCAGGAACAATGTC | + |
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Preference number: 4 (lower is better) Translates to: SAANQAQNTTPRHRTAPQGCHLV*PTRNNV Trigger: GACATTGTTCCTGGTGGGTCACACCAGGTGGCATCC...CTGGGGAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | AGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGCTCACTGGGGCCCAAGTTTaGAGCAGCCACAGGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RPQLQTKPKIQHPGTGQLTGAQV*SSHRSC Trigger: ACAGCTCCTGTGGCTGCTGCAAACTTGGGCCCCAGT...GAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | CCACTCACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCTCAGTAGCCTGGCTCTaGTCTGTATCCAGCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: PLTALPGSLKLGLSCKPSSVAWL*SVSSIP Trigger: TGGGATGCTGGATACAGACCAGAGCCAGGCTACTGA...GCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | TCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGCTCCCCAGCCCCTGTGGTGTACCTaGCATCAGGCACAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: SAANQAQNTTPRHRTAPQPLWCT*HQAQMP Trigger: TGGCATCTGTGCCTGATGCCAGGTACACCACAGGGG...CTGGGGAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | CTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGCTCCCCAGCAAAGATGAAGCTTGGCTCTaGCCCATCCACTGGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LQTKPKIQHPGTGQLPSKDEAWL*PIHWAA Trigger: AGCAGCCCAGTGGATGGGGCAGAGCCAAGCTTCATC...TTTGCTGGGGAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | CACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAATCTCTCTCAGTAGCCTaGCTCTGGTCTGTATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSPARLPQIRPQLQTKPKSLSVA*LWSVSS Trigger: GCTGGATACAGACCAGAGCCAGGCTACTGAGAGAGA...TTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | GCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCACTTGCCTCGGGAGTaGCTGGCTGCCATGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ARLPQIRPQLQTKPKIQHHLPRE*LAAMSE Trigger: CTCACTCATGGCAGCCAGCCACTCCCGAGGCAAGTG...GTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | AAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACGGGCCAGGCCAGGGCTaGCAAAATCCAAACCCCACA | + |
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Preference number: 4 (lower is better) Translates to: KLGLSCKPSPKYNTQAQDGPGQG*QNPNPT Trigger: TGTGGGGTTTGGATTTTGGCAGCCCTGGCCTGGCCC...GTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | AGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCCATCTCCAGGACCAGCCTaGAGCTCCTGGGAGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RLPQIRPQLQTKPKIQHPSPGPA*SSWEQS Trigger: GCTTTGCTCCCAGGAGCTCCAGGCTGGTCCTGGAGA...TGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | GCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACGGCATCAGGCACAGATaGCAAGACCAAGTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ARLPQIRPQLQTKPKIQHGIRHR*QDQVGL Trigger: GAGGCCAACTTGGTCTTGGCATCTGTGCCTGATGCC...GTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | CCACTCACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCAAAAGTCAGGGAAGATaGTGTCCGCTTCATCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PLTALPGSLKLGLSCKPSKSQGR*CPLHPS Trigger: TGAAGGATGAAGCGGACAGCATCTTCCCTGACTTTT...GCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | AGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGCTCACCACCAGTCAGGATTaGTGGTCATCAGAAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RPQLQTKPKIQHPGTGQLTTSQD*WSSERV Trigger: CACCCTTTCTGATGACCACCAATCCTGACTGGTGGT...GAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | GCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACTGCAGAACATCACCCTaGCACATGTGCCACATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ARLPQIRPQLQTKPKIQHCRTSP*HMCHIS Trigger: GGAGATGTGGCACATGTGGCAGGGTGATGTTCTGCA...GTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | AAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACCTAGGGTCCATGCTGTaGGCAAGCTGGAGGAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: KLGLSCKPSPKYNTQAQDLGSML*ASWRKY Trigger: GTACTTCCTCCAGCTTGCCCACAGCATGGACCCTAG...GTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR GCA 90 bp | AAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGTAGAGCCCGCAAGTaGTCACAGCTCAACGAGATC | + |
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Preference number: 4 (lower is better) Translates to: KLGLSCKPSPKYNTQAQDSRARK*SQLNEI Trigger: GATCTCGTTGAGCTGTGAGCACTTGCGGGCTCTACT...GTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | CCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCATGCTGTGGGCAAGCTaGAGGAAGTACACAGACATC | + |
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Preference number: 4 (lower is better) Translates to: PGSLKLGLSCKPSPKYNTMLWAS*RKYTDI Trigger: GATGTCTGTGTACTTCCTCCAGCTTGCCCACAGCAT...GGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAAACCAGTCAGGATTGGTaGTCATCAGAAAGGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PARLPQIRPQLQTKPKIQTSQDW*SSERVL Trigger: GAGCACCCTTTCTGATGACCACCAATCCTGACTGGT...TTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 90 bp | CATGCCGGAAGATTCAGGGTCCCCGGCCAGGGATGCCACCTGGTGTaGCCCACCAGGAACAATGTCACTTGCCTCGGGAGTGGCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HAGRFRVPGQGCHLV*PTRNNVTCLGSGWL Trigger: CAGCCAGCCACTCCCGAGGCAAGTGACATTGTTCCTGGTGGGTCACACCAGGTGGCATCCCTGGCCGGGGACCCTGAATCTTCCGGCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 90 bp | GCCAGCATGCCGGAAGATTCAGGGTCCCCGGCCAGGGATGCCACCTaGTGTGACCCACCAGGAACAATGTCACTTGCCTCGGGAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ASMPEDSGSPARDAT*CDPPGTMSLASGVA Trigger: AGCCACTCCCGAGGCAAGTGACATTGTTCCTGGTGGGTCACACCAGGTGGCATCCCTGGCCGGGGACCCTGAATCTTCCGGCATGCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 90 bp | CCCACCAGGAACAATGTCACTTGCCTCGGGAGTGGCTGGCTGCCATaGGTGAGGGATCCAGGGTGGGAGCCCAGGACCCAAGCTGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: PTRNNVTCLGSGWLP*VRDPGWEPRTQAGR Trigger: TCTTCCAGCTTGGGTCCTGGGCTCCCACCCTGGATCCCTCACTCATGGCAGCCAGCCACTCCCGAGGCAAGTGACATTGTTCCTGGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 90 bp | CATCAGGCACAGATGCCAAGACCAAGTTGGCCTCCTCAGCCAGCATaGCGGAAGATTCAGGGTCCCCGGCCAGGGATGCCACCTGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: HQAQMPRPSWPPQPA*RKIQGPRPGMPPGV Trigger: CACACCAGGTGGCATCCCTGGCCGGGGACCCTGAATCTTCCGGCATGCTGGCTGAGGAGGCCAACTTGGTCTTGGCATCTGTGCCTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 90 bp | CCAGGAACAATGTCACTTGCCTCGGGAGTGGCTGGCTGCCATGAGTaGGGGATCCAGGGTGGGAGCCCAGGACCCAAGCTGGAAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: PGTMSLASGVAGCHE*GIQGGSPGPKLEDS Trigger: AGAGTCTTCCAGCTTGGGTCCTGGGCTCCCACCCTGGATCCCTCACTCATGGCAGCCAGCCACTCCCGAGGCAAGTGACATTGTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 90 bp | AGGGTGCTCCATCCACCACATCGGACCCTGCCCCTGTGGTGTACCTaGCATCAGGCACAGATGCCAAGACCAAGTTGGCCTCCTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RVLHPPHRTLPLWCT*HQAQMPRPSWPPQP Trigger: TGGCTGAGGAGGCCAACTTGGTCTTGGCATCTGTGCCTGATGCCAGGTACACCACAGGGGCAGGGTCCGATGTGGTGGATGGAGCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 90 bp | GCTCTGGCGATGACCAGGGCAGGAGGAAGGTCTCTCCAGCAGCTCTaGCTCTCTCTCAGTAGCCTGGCTCTGGTCTGTATCCAGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: ALAMTRAGGRSLQQL*LSLSSLALVCIQHP Trigger: GGGATGCTGGATACAGACCAGAGCCAGGCTACTGAGAGAGAGTCAGAGCTGCTGGAGAGACCTTCCTCCTGCCCTGGTCATCGCCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 90 bp | CACATCGGACCCTGCCCCTGTGGTGTACCTGGCATCAGGCACAGATaGCAAGACCAAGTTGGCCTCCTCAGCCAGCATGCCGGAAGATTC | + |
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Preference number: 5 (lower is better) Translates to: HIGPCPCGVPGIRHR*QDQVGLLSQHAGRF Trigger: GAATCTTCCGGCATGCTGGCTGAGGAGGCCAACTTGGTCTTGGCATCTGTGCCTGATGCCAGGTACACCACAGGGGCAGGGTCCGATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 90 bp | AGTGCTCACAGCTCAACGAGATCCGCCTCCTGCGTTCTCTCTCGCTaGCCACGTTTCTCCGAAGACTGGGGCCCAAGTTTGCAGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SAHSSTRSASCVLSR*PRFSEDWGPSLQQP Trigger: TGGCTGCTGCAAACTTGGGCCCCAGTCTTCGGAGAAACGTGGTCAGCGAGAGAGAACGCAGGAGGCGGATCTCGTTGAGCTGTGAGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 90 bp | GACATCTCCAGGACAGATGCCATGTCCTCCCGTCGGCCATCAAACTaGGGCAGTAGAGCCCGCAAGTGCTCACAGCTCAACGAGATCCGC | + |
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Preference number: 5 (lower is better) Translates to: DISRTDAMSSRRPSN*GSRARKCSQLNEIR Trigger: GCGGATCTCGTTGAGCTGTGAGCACTTGCGGGCTCTACTGCCTCAGTTTGATGGCCGACGGGAGGACATGGCATCTGTCCTGGAGATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 90 bp | TTCTCCGAAGACTGGGGCCCAAGTTTGCAGCAGCCACAGGAGCTGTaGAGAGAGCTGAGCTTTGTGATGAGGTCTGCAAGCTGTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FSEDWGPSLQQPQEL*RELSFVMRSASCPE Trigger: CTCAGGACAGCTTGCAGACCTCATCACAAAGCTCAGCTCTCTGCACAGCTCCTGTGGCTGCTGCAAACTTGGGCCCCAGTCTTCGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 90 bp | ATTGGTGGTCATCAGAAAGGGTGCTCCATCCACCACATCGGACCCTaGCCCTGTGGTGTACCTGGCATCAGGCACAGATGCCAAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: IGGHQKGCSIHHIGP*PCGVPGIRHRCQDQ Trigger: TTGGTCTTGGCATCTGTGCCTGATGCCAGGTACACCACAGGGGCAGGGTCCGATGTGGTGGATGGAGCACCCTTTCTGATGACCACCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 90 bp | GGAACAGAGAGTTGCTCCCAGCTAGGGTCCATGCTGTGGGCAAGCTaGAGGAAGTACACAGACATCTCCAGGACAGATGCCATGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GTESCSQLGSMLWAS*RKYTDISRTDAMSS Trigger: GGAGGACATGGCATCTGTCCTGGAGATGTCTGTGTACTTCCTCCAGCTTGCCCACAGCATGGACCCTAGCTGGGAGCAACTCTCTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CAA 90 bp | TCAGCTGCAAACCAAGCCCAAAATACAACACCCAGGCACAGGACAGCTCCCCAGGATGCCAAGACCAAGTaGGCCTCCTCAGCCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: SAANQAQNTTPRHRTAPQDAKTK*ASSASM Trigger: CATGCTGGCTGAGGAGGCCAACTTGGTCTTGGCATC...CTGGGGAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CAA 90 bp | AAACCACTTTCCTCTTTAATACAAACTCCACTCACAGCCCTGCCAGGCTCCCTCGACTGGGGCCCAAGTTaGCAGCAGCCACAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: KPLSSLIQTPLTALPGSLDWGPS*QQPQEL Trigger: CAGCTCCTGTGGCTGCTGCAAACTTGGGCCCCAGTC...GAGGGAGCCTGGCAGGGCTGTGAGTGGAGTTTGTATTAAAGAGGAAAGTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CAA 90 bp | CCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAACCAAGCCCAAAATACAACACCGACACAGCAGATGGTTaGGCTATACCGGAGTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PGSLKLGLSCKPSPKYNTDTADG*AIPESG Trigger: GCCAGACTCCGGTATAGCCAAACCATCTGCTGTGTC...GGTGTTGTATTTTGGGCTTGGTTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS-3UTR CAA 90 bp | CAAACTCCACTCACAGCCCTGCCAGGCTCCCTCAAATTAGGCCTCAGCTGCAAAAACCACCAGTCAGGATaGGTGGTCATCAGAAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: QTPLTALPGSLKLGLSCKNHQSG*VVIRKG Trigger: ACCCTTTCTGATGACCACCAATCCTGACTGGTGGTT...TTTGCAGCTGAGGCCTAATTTGAGGGAGCCTGGCAGGGCTGTGAGTGGAGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 72 bp | GGAGCAAAGCTCAGGGTCTCCGATGAAGCTTGGCTCTaGCCCATCCACTGGGCTGCTCCTGGCAAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GAKLRVSDEAWL*PIHWAAPGKGW Trigger: CCAGCCCTTGCCAGGAGCAGCCCAGTGGATGGGGCAGAGCCAAGCTTCATCGGAGACCCTGAGCTTTGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 72 bp | CAGATGCCAAGACCAAGTTGGCCTCCTCAGCCAGCATaGCGGAAGATTCAGGGTCCCCGGCCAGGGATGCCA | + |
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Preference number: 6 (lower is better) Translates to: QMPRPSWPPQPA*RKIQGPRPGMP Trigger: TGGCATCCCTGGCCGGGGACCCTGAATCTTCCGGCATGCTGGCTGAGGAGGCCAACTTGGTCTTGGCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | CCGGAAGATTCAGGGTCCCCGGCCAGGGATGCCACCTaGTGTGACCCACCAGGAACAATGTCACTTGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PEDSGSPARDAT*CDPPGTMSLAS Trigger: CGAGGCAAGTGACATTGTTCCTGGTGGGTCACACCAGGTGGCATCCCTGGCCGGGGACCCTGAATCTTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | CTCCTGGGAGCAAAGCTCAGGGTCTCCGATGAAGCTTaGCTCTGCCCCATCCACTGGGCTGCTCCTGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LLGAKLRVSDEA*LCPIHWAAPGK Trigger: CTTGCCAGGAGCAGCCCAGTGGATGGGGCAGAGCCAAGCTTCATCGGAGACCCTGAGCTTTGCTCCCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 72 bp | AGATTCAGGGTCCCCGGCCAGGGATGCCACCTGGTGTaGCCCACCAGGAACAATGTCACTTGCCTCGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RFRVPGQGCHLV*PTRNNVTCLGS Trigger: ACTCCCGAGGCAAGTGACATTGTTCCTGGTGGGTCACACCAGGTGGCATCCCTGGCCGGGGACCCTGAATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | AGGGTGCTCCATCCACCACATCGGACCCTGCCCCTGTaGTGTACCTGGCATCAGGCACAGATGCCAAGACCA | + |
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Preference number: 6 (lower is better) Translates to: RVLHPPHRTLPL*CTWHQAQMPRP Trigger: TGGTCTTGGCATCTGTGCCTGATGCCAGGTACACCACAGGGGCAGGGTCCGATGTGGTGGATGGAGCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 72 bp | TCACCCTGCCACATGTGCCACATCTCCTGGGGAGGCTaGGGAACAGAGAGTTGCTCCCAGCTAGGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SPCHMCHISWGG*GTESCSQLGSM Trigger: CATGGACCCTAGCTGGGAGCAACTCTCTGTTCCTCAGCCTCCCCAGGAGATGTGGCACATGTGGCAGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 72 bp | CATCAGAAAGGGTGCTCCATCCACCACATCGGACCCTaGCCCTGTGGTGTACCTGGCATCAGGCACAGATGC | + |
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Preference number: 6 (lower is better) Translates to: HQKGCSIHHIGP*PCGVPGIRHRC Trigger: GCATCTGTGCCTGATGCCAGGTACACCACAGGGGCAGGGTCCGATGTGGTGGATGGAGCACCCTTTCTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | TGCCCTCCACCGACCCCAACCACCAGTCAGGATTGGTaGTCATCAGAAAGGGTGCTCCATCCACCACATCGG | + |
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Preference number: 6 (lower is better) Translates to: CPPPTPTTSQDW*SSERVLHPPHR Trigger: CCGATGTGGTGGATGGAGCACCCTTTCTGATGACCACCAATCCTGACTGGTGGTTGGGGTCGGTGGAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS TCA 72 bp | AGGACAGATGCCATGTCCTCCCGTCGGCCATCAAACTaGGGCAGTAGAGCCCGCAAGTGCTCACAGCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: RTDAMSSRRPSN*GSRARKCSQLN Trigger: GTTGAGCTGTGAGCACTTGCGGGCTCTACTGCCTCAGTTTGATGGCCGACGGGAGGACATGGCATCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 72 bp | GACTGGGGCCCAAGTTTGCAGCAGCCACAGGAGCTGTaGAGAGAGCTGAGCTTTGTGATGAGGTCTGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: DWGPSLQQPQEL*RELSFVMRSAS Trigger: GCTTGCAGACCTCATCACAAAGCTCAGCTCTCTGCACAGCTCCTGTGGCTGCTGCAAACTTGGGCCCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 72 bp | CAACCACCAGTCAGGATTGGTGGTCATCAGAAAGGGTaGTCCATCCACCACATCGGACCCTGCCCCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: QPPVRIGGHQKG*SIHHIGPCPCG Trigger: ACCACAGGGGCAGGGTCCGATGTGGTGGATGGAGCACCCTTTCTGATGACCACCAATCCTGACTGGTGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | CTCTGCCCTCCACCGACCCCAACCACCAGTCAGGATTaGTGGTCATCAGAAAGGGTGCTCCATCCACCACAT | + |
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Preference number: 6 (lower is better) Translates to: LCPPPTPTTSQD*WSSERVLHPPH Trigger: ATGTGGTGGATGGAGCACCCTTTCTGATGACCACCAATCCTGACTGGTGGTTGGGGTCGGTGGAGGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | AGTTGCTCCCAGCTAGGGTCCATGCTGTGGGCAAGCTaGAGGAAGTACACAGACATCTCCAGGACAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: SCSQLGSMLWAS*RKYTDISRTDA Trigger: GGCATCTGTCCTGGAGATGTCTGTGTACTTCCTCCAGCTTGCCCACAGCATGGACCCTAGCTGGGAGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | GGAACAGAGAGTTGCTCCCAGCTAGGGTCCATGCTGTaGGCAAGCTGGAGGAAGTACACAGACATCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GTESCSQLGSML*ASWRKYTDISR Trigger: CCTGGAGATGTCTGTGTACTTCCTCCAGCTTGCCCACAGCATGGACCCTAGCTGGGAGCAACTCTCTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | TCCAGCAGCTCTGACTCTCTCTCAGTAGCCTGGCTCTaGTCTGTATCCAGCATCCCAAAGCATGGGGGATCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSDSLSVAWL*SVSSIPKHGGS Trigger: GGATCCCCCATGCTTTGGGATGCTGGATACAGACCAGAGCCAGGCTACTGAGAGAGAGTCAGAGCTGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS CCA 72 bp | TGTACCTGGCATCAGGCACAGATGCCAAGACCAAGTTaGCCTCCTCAGCCAGCATGCCGGAAGATTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: CTWHQAQMPRPS*PPQPACRKIQG Trigger: ACCCTGAATCTTCCGGCATGCTGGCTGAGGAGGCCAACTTGGTCTTGGCATCTGTGCCTGATGCCAGGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 72 bp | AAGCTGGAGGAAGTACACAGACATCTCCAGGACAGATaGCATGTCCTCCCGTCGGCCATCAAACTGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KLEEVHRHLQDR*HVLPSAIKLRQ Trigger: CTGCCTCAGTTTGATGGCCGACGGGAGGACATGGCATCTGTCCTGGAGATGTCTGTGTACTTCCTCCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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| CDS GCA 72 bp | AGATGGTTTGGCTATACCGGAGTCTGGCTTGCTGTCTaGAATCTGATTCGCCAGGGTTACCTGCAGAACATC | + |
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Preference number: 6 (lower is better) Translates to: RWFGYTGVWLAV*NLIRQGYLQNI Trigger: GATGTTCTGCAGGTAACCCTGGCGAATCAGATTGCAGACAGCAAGCCAGACTCCGGTATAGCCAAACCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076989.7 |
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