RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOGA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055485

Ensembl transcript IDs: ENSMUST00000069098.7

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGTGGGTGGTACCAGGCCCCCTTTGGGATCCAGAGCTGACTTGCTaGGCTCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGT +
Preference number: 1 (lower is better)
Translates to: VWVVPGPLWDPELTC*ALQVLLRPSPGHPG
Trigger: ACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGAGCTCAGCAAGTCAGCTCTGGATCCCAAAGGGGGCCTGGTACCACCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 90 bp CTCTGGGTGGCTTCTCCTCCACACGTGGTCAGAAGGGAGCACCTCTaGCAGTCTTGGTCCTGGAGCCTGGCCAGAAATGCCTCCTTTTCT +
Preference number: 1 (lower is better)
Translates to: LWVASPPHVVRREHL*QSWSWSLARNASFS
Trigger: AGAAAAGGAGGCATTTCTGGCCAGGCTCCAGGACCAAGACTGGCAGAGGTGCTCCCTTCTGACCACGTGTGGAGGAGAAGCCACCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CCA 90 bp GCTTCTCCTCCACACGTGGTCAGAAGGGAGCACCTCTGCCAGTCTTaGTCCTGGAGCCTGGCCAGAAATGCCTCCTTTTCTGGATCCTTC +
Preference number: 1 (lower is better)
Translates to: ASPPHVVRREHLCQS*SWSLARNASFSGSF
Trigger: GAAGGATCCAGAAAAGGAGGCATTTCTGGCCAGGCTCCAGGACCAAGACTGGCAGAGGTGCTCCCTTCTGACCACGTGTGGAGGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CCA 90 bp ACGTGGTCAGAAGGGAGCACCTCTGCCAGTCTTGGTCCTGGAGCCTaGCCAGAAATGCCTCCTTTTCTGGATCCTTCTAAGAAGCGGTGT +
Preference number: 1 (lower is better)
Translates to: TWSEGSTSASLGPGA*PEMPPFLDPSKKRC
Trigger: ACACCGCTTCTTAGAAGGATCCAGAAAAGGAGGCATTTCTGGCCAGGCTCCAGGACCAAGACTGGCAGAGGTGCTCCCTTCTGACCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CCA 90 bp AGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTAGCTaGCTCTCTGCCTTTCCAAGGGGACCTCTGCACAAAAGCCAATCC +
Preference number: 1 (lower is better)
Translates to: RGISLVLEQTSYAAS*LSAFPRGPLHKSQS
Trigger: GGATTGGCTTTTGTGCAGAGGTCCCCTTGGAAAGGCAGAGAGCCAGCTAGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 90 bp GGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTAATGTaGAAGCTCTTCTGTGGCAGTGGCACAGCTGCCATTCCTCCTGGA +
Preference number: 1 (lower is better)
Translates to: GHCPAVSKTPCFTLM*KLFCGSGTAAIPPG
Trigger: TCCAGGAGGAATGGCAGCTGTGCCACTGCCACAGAAGAGCTTTCACATTAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 90 bp GGTCTCCAGAGCTCCAGGATTCCAAGTGTACTTAGCCCTGAAATCTaGTCTATCATGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAAC +
Preference number: 1 (lower is better)
Translates to: GLQSSRIPSVLSPEI*SIMSPFPAPGRSNN
Trigger: GTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACATGATAGAGCAGATTTCAGGGCTAAGTACACTTGGAATCCTGGAGCTCTGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 90 bp ACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACTaGAAAACAAGACCTGGAGCTTGCAACACCTGTTGGGGGCCACAG +
Preference number: 1 (lower is better)
Translates to: TSGLAQWQARIRNGD*KTRPGACNTCWGPQ
Trigger: CTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTCTTGTTTTTCAGTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 90 bp ACAGGCTGGCAGGCTGGTAGACACTCTCAGATCCGTGTGCAAAGCTaGAATCGACAACATTCTACAAGTCCATCCTGTTTTCCTGCGAGT +
Preference number: 1 (lower is better)
Translates to: TGWQAGRHSQIRVQS*NRQHSTSPSCFPAS
Trigger: ACTCGCAGGAAAACAGGATGGACTTGTAGAATGTTGTCGATTGCAGCTTTGCACACGGATCTGAGAGTGTCTACCAGCCTGCCAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 90 bp GCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGATCCGTGTaGAAAGCTGCAATCGACAACATTCTACAAGTCCATCCTGTTTTC +
Preference number: 1 (lower is better)
Translates to: AGEQAGRLVDTLRSV*KAAIDNILQVHPVF
Trigger: GAAAACAGGATGGACTTGTAGAATGTTGTCGATTGCAGCTTTGCACACGGATCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 90 bp GCAAAGCTGCAATCGACAACATTCTACAAGTCCATCCTGTTTTCCTaGGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTC +
Preference number: 1 (lower is better)
Translates to: AKLQSTTFYKSILFS*EFLLRECGRNRAAV
Trigger: GACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAGGAAAACAGGATGGACTTGTAGAATGTTGTCGATTGCAGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CCA 90 bp CTACAAGTCCATCCTGTTTTCCTGCGAGTTCTTACTTCGGGAATGTaGAAGGAACAGAGCCGCAGTCATCTGTGTTTGACTCTCATGAGA +
Preference number: 1 (lower is better)
Translates to: LQVHPVFLRVLTSGM*KEQSRSHLCLTLMR
Trigger: TCTCATGAGAGTCAAACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAGGAAAACAGGATGGACTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 90 bp AGATCAAACCAAACCAATATTTACACGGAACATTTTCAACCCCACTaGGCCCTATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGC +
Preference number: 1 (lower is better)
Translates to: RSNQTNIYTEHFQPH*ALCPEASIGTVTSG
Trigger: GCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCCGTGTAAATATTGGTTTGGTTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CAA 90 bp AGCGGTGTGGGTGGTACCAGGCCCCCTTTGGGATCCAGAGCTGACTaGCTGAGCTCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCC +
Preference number: 2 (lower is better)
Translates to: SGVGGTRPPLGSRAD*LSSSGAFEAQSWSP
Trigger: GGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGAGCTCAGCAAGTCAGCTCTGGATCCCAAAGGGGGCCTGGTACCACCCACACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR TCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCCAGGCCCAACTCTTCTaGGAGCCTCAAGCCGGGCCC +
Preference number: 2 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASQAQLF*EPQAGP
Trigger: GGGCCCGGCTTGAGGCTCTCAGAAGAGTTGGGCCTG...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CAA 90 bp GGCTTCTCCTCCACACGTGGTCAGAAGGGAGCACCTCTGCCAGTCTaGGTCCTGGAGCCTGGCCAGAAATGCCTCCTTTTCTGGATCCTT +
Preference number: 2 (lower is better)
Translates to: GFSSTRGQKGAPLPV*VLEPGQKCLLFWIL
Trigger: AAGGATCCAGAAAAGGAGGCATTTCTGGCCAGGCTCCAGGACCAAGACTGGCAGAGGTGCTCCCTTCTGACCACGTGTGGAGGAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR TCA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTAGGGTCTGGGCTGCTTaGGGTGGGTGCTTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPRVWAA*GGCLVA
Trigger: AGCAACCAAGCACCCACCTCAAGCAGCCCAGACCCT...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGAGAGGACACGAGCCCTTaGCTCATCTCCAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: YTGVVQATPRGVGRTGSREDTSP*LISRVW
Trigger: CCAGACCCTGGAGATGAGGCAAGGGCTCGTGTCCTC...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp CTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCACAAGCCCCACACGAGCCTGGCCAGAAATaGCTCCTTTTCTGGATCCTT +
Preference number: 2 (lower is better)
Translates to: LLSCLSHTGDSMLSQAPHEPGQK*LLFWIL
Trigger: AAGGATCCAGAAAAGGAGGCATTTCTGGCCAGGCTC...GTGTGGGGCTTGTGACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR TCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTCTCTTCAGGTGCTTTTaGGGCCCAGTCCTGGTCACC +
Preference number: 2 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVLFRCF*GPVLVT
Trigger: GGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGAG...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR TCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACCCTCAAGCCGGGCCCTaGGCAAAGTGGAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: LWPGVVPSARNNLRGASDPQAGP*AKWNSL
Trigger: CAGAGAATTCCACTTTGCTCAGGGCCCGGCTTGAGG...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTTGGCAGTGGCACAGCTaGCATTCCTCCTGGATGGAC +
Preference number: 2 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVWQWHS*HSSWMD
Trigger: GTCCATCCAGGAGGAATGGCAGCTGTGCCACTGCCA...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAAGAAGGGAGCACCTCTaGCAGTCTTGGTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRRREHL*QSWSWS
Trigger: GCTCCAGGACCAAGACTGGCAGAGGTGCTCCCTTCT...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp GAGGAGCCACGAGTGGCTATAAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAAGGAAGTGTTTCTGCTaGTGCAGGTCTGTGACGCCG +
Preference number: 2 (lower is better)
Translates to: EEPRVAIRLREALVNRLARKCFC*CRSVTP
Trigger: CGGCGTCACAGACCTGCAGCAGCAGAAACACTTCCT...TGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTTATAGCCACTCGTGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACGCCATTCCTCCTGGATaGACTGAGGCTGAGGACACG +
Preference number: 2 (lower is better)
Translates to: LWPGVVPSARNNLRGASDAIPPG*TEAEDT
Trigger: CGTGTCCTCAGCCTCAGTCCATCCAGGAGGAATGGC...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR TCA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGAGGCCTGCAGTTTGTCTaGAGCACTTACAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRGLQFV*STYSLA
Trigger: GGCCAGACTGTAAGTGCTTCAGACAAACTGCAGGCC...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTCACCTCTGCCAGTCTTaGTCCTGGAGCCTGGCCAGA +
Preference number: 2 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSHLCQS*SWSLAR
Trigger: TCTGGCCAGGCTCCAGGACCAAGACTGGCAGAGGTG...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAGGGAGTCAGCTCTTCTaGCCTCCTACTCTGAACCCT +
Preference number: 2 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRGSQLF*PPTLNP
Trigger: AGGGTTCAGAGTAGGAGGCCAGAAGAGCTGACTCCC...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACAGAGCATTTGCATCCTaGAGGGACCTGGTCCTCGGT +
Preference number: 2 (lower is better)
Translates to: LWPGVVPSARNNLRGASDRAFAS*RDLVLG
Trigger: ACCGAGGACCAGGTCCCTCCAGGATGCAAATGCTCT...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CAA 90 bp TTCTGGATCCTTCTAAGAAGCGGTGTGGGTGGTACCAGGCCCCCTTaGGGATCCAGAGCTGACTTGCTGAGCTCTTCAGGTGCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: FWILLRSGVGGTRPP*GSRADLLSSSGAFE
Trigger: CTCAAAAGCACCTGAAGAGCTCAGCAAGTCAGCTCTGGATCCCAAAGGGGGCCTGGTACCACCCACACCGCTTCTTAGAAGGATCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CAA 90 bp CTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTTaGACTCTCATGAGAAGAGGTGCTGGCGGGAAGGGAGGGATGGGA +
Preference number: 2 (lower is better)
Translates to: LTSGMWKEQSRSHLC*TLMRRGAGGKGGMG
Trigger: TCCCATCCCTCCCTTCCCGCCAGCACCTCTTCTCATGAGAGTCAAACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTGAGGGATGGGAAGGATaGTGGAGGATGTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSEGWEG*WRMSGE
Trigger: CTCCCCAGACATCCTCCACCATCCTTCCCATCCCTC...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTCCCAGGAAGTGTTTCTaGTGCTGCAGGTCTGTGACG +
Preference number: 2 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCPRKCF*CCRSVT
Trigger: CGTCACAGACCTGCAGCAGCAGAAACACTTCCTGGG...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp GAGGAGCCACGAGTGGCTATAAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAACTCTCAGATCCGTGTaGAAAGCTGCAATCGACAAC +
Preference number: 2 (lower is better)
Translates to: EEPRVAIRLREALVNRLATLRSV*KAAIDN
Trigger: GTTGTCGATTGCAGCTTTGCACACGGATCTGAGAGT...TGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTTATAGCCACTCGTGGCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACACAAGACCTGGAGCTTaGAACACCTGTTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDTRPGA*NTCWGP
Trigger: TGGCCCCCAACAGGTGTTGCAAGCTCCAGGTCTTGT...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CAA 90 bp TCCCCTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTaGCTTTACCTTAATGTGAAAGCTCTTCTGTGGCAGTGGCACAGC +
Preference number: 2 (lower is better)
Translates to: SPGNQRSLPSSQQDT*LYLNVKALLWQWHS
Trigger: GCTGTGCCACTGCCACAGAAGAGCTTTCACATTAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTCTCACTGTCTTCCCCTaGAAATCAGAGGTCACTGCC +
Preference number: 2 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSLTVFP*KSEVTA
Trigger: GGCAGTGACCTCTGATTTCCAGGGGAAGACAGTGAG...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCATCTTGGCTCTCCCTCTaGTCTGACCTATCCAATAGT +
Preference number: 2 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPASWLSL*SDLSNS
Trigger: ACTATTGGATAGGTCAGACCAGAGGGAGAGCCAAGA...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTTATGTCTTGGCCTCTTaGCTCTCCCTCTGGTCTGAC +
Preference number: 2 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCYVLAS*LSLWSD
Trigger: GTCAGACCAGAGGGAGAGCCAAGAGGCCAAGACATA...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTTCTTGGGCTATGTCTTaGCCTCTTGGCTCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSSWAMS*PLGSPS
Trigger: AGAGGGAGAGCCAAGAGGCCAAGACATAGCCCAAGA...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCCTTACTTCGGGAATGTaGAAGGAACAGAGCCGCAGT +
Preference number: 2 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGLTSGM*KEQSRS
Trigger: ACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAG...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR TCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCATCGAGACATGGCATTaGGGAATGTACCTCTTTGTC +
Preference number: 2 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASIETWH*GMYLFV
Trigger: GACAAAGAGGTACATTCCTCAATGCCATGTCTCGAT...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCTCCATCCTGTTTTCCTaGGAGTTCTTACTTCGGGAA +
Preference number: 2 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASSILFS*EFLLRE
Trigger: TTCCCGAAGTAAGAACTCGCAGGAAAACAGGATGGA...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR GCA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCGAAATCAGAGGTCACTaGCCAGCAGTCAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: GKCSALRLNGTGGTRCRAEIRGH*PAVSKT
Trigger: TGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTC...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR TCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTCTCTTTGTCAGGTGCTaGGATAGATGCTACCATTTT +
Preference number: 2 (lower is better)
Translates to: RWECRGISLVLEQTSYAALFVRC*DRCYHF
Trigger: AAAATGGTAGCATCTATCTCAGCACCTGACAAAGAG...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTAAATGCCTCCTTTTCTaGATCCTTCTAAGAAGCGGT +
Preference number: 2 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSKCLLF*ILLRSG
Trigger: ACCGCTTCTTAGAAGGATCCAGAAAAGGAGGCATTT...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CCA 90 bp GCTGAGATAGATGCTACCATTTTTGTTCTCATGTACTACAAAAGTTGGGCCCTCGTGAAAGCTCTTCTGTaGCAGTGGCACAGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: AEIDATIFVLMYYKSWALVKALL*QWHSCH
Trigger: ATGGCAGCTGTGCCACTGCCACAGAAGAGCTTTCAC...GAGGGCCCAACTTTTGTAGTACATGAGAACAAAAATGGTAGCATCTATCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CCA 72 bp TTCTGTGGCAGTGGCACAGCTGCCATTCCTCCTGGATaGACTGAGGCTGAGGACACGAGCCCTTGCCTCATC +
Preference number: 3 (lower is better)
Translates to: FCGSGTAAIPPG*TEAEDTSPCLI
Trigger: GATGAGGCAAGGGCTCGTGTCCTCAGCCTCAGTCCATCCAGGAGGAATGGCAGCTGTGCCACTGCCACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CAA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCACAGGGTCTGGGCTGCTaGAGGTGGGTGCTTGGTTGC +
Preference number: 3 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPAQGLGC*RWVLGC
Trigger: GCAACCAAGCACCCACCTCAAGCAGCCCAGACCCTG...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp GTACCAGGCCCCCTTTGGGATCCAGAGCTGACTTGCTaGGCTCTTCAGGTGCTTTTGAGGCCCAGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: VPGPLWDPELTC*ALQVLLRPSPG
Trigger: ACCAGGACTGGGCCTCAAAAGCACCTGAAGAGCTCAGCAAGTCAGCTCTGGATCCCAAAGGGGGCCTGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp GTGTTTCTGCTGCTGCAGGTCTGTGACGCCGAACCCTaGTACCAAGAGGCCCTAGGGATCGAGACATGGCAT +
Preference number: 3 (lower is better)
Translates to: VFLLLQVCDAEP*YQEALGIETWH
Trigger: ATGCCATGTCTCGATCCCTAGGGCCTCTTGGTAGCAGGGTTCGGCGTCACAGACCTGCAGCAGCAGAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp CTTAGAGGGGCCTCTGACCTCTTAGAGGAGAGCATTTaGATCCTGGAGGGACCTGGTCCTCGGTCCAATGGC +
Preference number: 3 (lower is better)
Translates to: LRGASDLLEESI*ILEGPGPRSNG
Trigger: GCCATTGGACCGAGGACCAGGTCCCTCCAGGATGCAAATGCTCTCCTCTAAGAGGTCAGAGGCCCCTCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp ACAGTCTGGCCTGTAGAGGCCGGGCCACCTACCGGGTaGCGAGGGAAATGTAGTGCTCTGAGACTAAATGGT +
Preference number: 3 (lower is better)
Translates to: TVWPVEAGPPTG*RGKCSALRLNG
Trigger: ACCATTTAGTCTCAGAGCACTACATTTCCCTCGTCACCCGGTAGGTGGCCCGGCCTCTACAGGCCAGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp GCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTTaGTCACTGTCTTCCCCTGGAAATCAGAGGTCACTG +
Preference number: 3 (lower is better)
Translates to: AQSWSPRFGRSP*SLSSPGNQRSL
Trigger: CAGTGACCTCTGATTTCCAGGGGAAGACAGTGAGCAAGGAGAACGACCAAACCTGGGTGACCAGGACTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp GGGGGCCACAGGAGCCAGGTGCTGAGACAGTGGAAATaGACAACCCATACAGAGACGATGGTAAGGCTGAAC +
Preference number: 3 (lower is better)
Translates to: GGHRSQVLRQWK*TTHTETMVRLN
Trigger: GTTCAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTGGCTCCTGTGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CAA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCGTTTGGTCGTTCTCCTaGCTCACTGTCTTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASVWSFS*LTVFPW
Trigger: CCAGGGGAAGACAGTGAGCAAGGAGAACGACCAAAC...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CAA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTCCTGCCTCCCAGTTCTaGCTACATGTAGGCACAGAC +
Preference number: 3 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVPASQF*LHVGTD
Trigger: GTCTGTGCCTACATGTAGCAAGAACTGGGAGGCAGG...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CAA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCCTTAGAGGAGAGCATTaGCATCCTGGAGGGACCTGG +
Preference number: 3 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASLRGEH*HPGGTW
Trigger: CCAGGTCCCTCCAGGATGCAAATGCTCTCCTCTAAG...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp TTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTaGGACAGTGGAAATGCACAACCCATACAGAGACGA +
Preference number: 3 (lower is better)
Translates to: LQHLLGATGARC*DSGNAQPIQRR
Trigger: TCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp CTGACCTATCCAATAGTCTCTCCCAGGAAGTGTTTCTaGTGCTGCAGGTCTGTGACGCCGAACCCTGCTACC +
Preference number: 3 (lower is better)
Translates to: LTYPIVSPRKCF*CCRSVTPNPAT
Trigger: GGTAGCAGGGTTCGGCGTCACAGACCTGCAGCAGCAGAAACACTTCCTGGGAGAGACTATTGGATAGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CCA 72 bp GAAGGGAGCACCTCTGCCAGTCTTGGTCCTGGAGCCTaGCCAGAAATGCCTCCTTTTCTGGATCCTTCTAAG +
Preference number: 3 (lower is better)
Translates to: EGSTSASLGPGA*PEMPPFLDPSK
Trigger: CTTAGAAGGATCCAGAAAAGGAGGCATTTCTGGCCAGGCTCCAGGACCAAGACTGGCAGAGGTGCTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp TATCCAATAGTCTCTCCCAGGAAGTGTTTCTGCTGCTaGAGGTCTGTGACGCCGAACCCTGCTACCAAGAGG +
Preference number: 3 (lower is better)
Translates to: YPIVSPRKCFCC*RSVTPNPATKR
Trigger: CCTCTTGGTAGCAGGGTTCGGCGTCACAGACCTGCAGCAGCAGAAACACTTCCTGGGAGAGACTATTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp ACCTATCCAATAGTCTCTCCCAGGAAGTGTTTCTGCTaGTGCAGGTCTGTGACGCCGAACCCTGCTACCAAG +
Preference number: 3 (lower is better)
Translates to: TYPIVSPRKCFC*CRSVTPNPATK
Trigger: CTTGGTAGCAGGGTTCGGCGTCACAGACCTGCAGCAGCAGAAACACTTCCTGGGAGAGACTATTGGATAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp CATGACAAGGGAGTCAGCTCTTCTGGCCTCCTACTCTaGACCCTACATACTCCTACCTGCCTCCCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: HDKGVSSSGLLL*TLHTPTCLPVL
Trigger: AAGAACTGGGAGGCAGGTAGGAGTATGTAGGGTTCAGAGTAGGAGGCCAGAAGAGCTGACTCCCTTGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp CTCATGTACTACAAAAGTTGGGCCCTCATGTCCCCATaGCAAGGGAGTCAGCTCTTCTGGCCTCCTACTCTG +
Preference number: 3 (lower is better)
Translates to: LMYYKSWALMSP*QGSQLFWPPTL
Trigger: CAGAGTAGGAGGCCAGAAGAGCTGACTCCCTTGTCATGGGGACATGAGGGCCCAACTTTTGTAGTACATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp CTTGCTCACTGTCTTCCCCTGGAAATCAGAGGTCACTaGCCAGCAGTCAGCAAGACACCTTGCTTTACCTTA +
Preference number: 3 (lower is better)
Translates to: LAHCLPLEIRGH*PAVSKTPCFTL
Trigger: TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAGGGGAAGACAGTGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp CAGGCTGGCAGGCTGGTAGACACTCTCAGATCCGTGTaGAAAGCTGCAATCGACAACATTCTACAAGTCCAT +
Preference number: 3 (lower is better)
Translates to: QAGRLVDTLRSV*KAAIDNILQVH
Trigger: ATGGACTTGTAGAATGTTGTCGATTGCAGCTTTGCACACGGATCTGAGAGTGTCTACCAGCCTGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR-3UTR CAA 90 bp CAGGTGCTGAGACAGTGGAAATGCACAACCCATACAGAGACGATGGTAAGGCTGCGCAGTCATCTGTGTTaGACTCTCATGAGAAGAGGT +
Preference number: 3 (lower is better)
Translates to: QVLRQWKCTTHTETMVRLRSHLC*TLMRRG
Trigger: ACCTCTTCTCATGAGAGTCAAACACAGATGACTGCG...CAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp CCAGCAGTCAGCAAGACACCTTGCTTTACCTTAATGTaGAAGCTCTTCTGTGGCAGTGGCACAGCTGCCATT +
Preference number: 3 (lower is better)
Translates to: PAVSKTPCFTLM*KLFCGSGTAAI
Trigger: AATGGCAGCTGTGCCACTGCCACAGAAGAGCTTTCACATTAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CCA 72 bp CATCCTGTTTTCCTGCGAGTTCTTACTTCGGGAATGTaGAAGGAACAGAGCCGCAGTCATCTGTGTTTGACT +
Preference number: 3 (lower is better)
Translates to: HPVFLRVLTSGM*KEQSRSHLCLT
Trigger: AGTCAAACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAGGAAAACAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp CTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACTaGAAAACAAGACCTGGAGCTTGCAACACCTGTTGG +
Preference number: 3 (lower is better)
Translates to: LAQWQARIRNGD*KTRPGACNTCW
Trigger: CCAACAGGTGTTGCAAGCTCCAGGTCTTGTTTTTCAGTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR TCA 72 bp CAAACCAATATTTACACGGAACATTTTCAACCCCACTaGGCCCTATGTCCAGAGGCTTCCATAGGGACAGTG +
Preference number: 3 (lower is better)
Translates to: QTNIYTEHFQPH*ALCPEASIGTV
Trigger: CACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCCGTGTAAATATTGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR GCA 72 bp CAGGCTGGTAGACACTCTCAGATCCGTGTGCAAAGCTaGAATCGACAACATTCTACAAGTCCATCCTGTTTT +
Preference number: 3 (lower is better)
Translates to: QAGRHSQIRVQS*NRQHSTSPSCF
Trigger: AAAACAGGATGGACTTGTAGAATGTTGTCGATTGCAGCTTTGCACACGGATCTGAGAGTGTCTACCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGCGGAGCTACTGTCCGTaGGGCTGGGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: DLELATPVGGHRSQVLRQRSYCP*GWAAAA
Trigger: CGCCGCCGCCGCCCAGCCTCACGGACAGTAGCTCCG...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCGTGGCAAGCGGCTGCTaGCCACCGACGATGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RPEPATELPQPHGGLHAVVASGC*PPTMRP
Trigger: TGGCCGCATCGTCGGTGGGCAGCAGCCGCTTGCCAC...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGACCCCGGAGGCTGTCGTaGGCCTCGGCCAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRPRRLS*ASARTS
Trigger: GCTGGTCCTGGCCGAGGCCCACGACAGCCTCCGGGG...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGGAGAGCCGGAGCGCATaGCCTGCCGCACGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: DLELATPVGGHRSQVLRQESRSA*PAARSW
Trigger: CCAACTGCGTGCGGCAGGCCATGCGCTCCGGCTCTC...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGCCAGGATGGCGTGGATaGGCTTGGCATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DLELATPVGGHRSQVLRQPGWRG*AWHPWG
Trigger: GCCCCAGGGATGCCAAGCTCATCCACGCCATCCTGG...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAGCTGCCCACCGACGATaGGGCCACCGACGGCTCATC +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRAAHRR*GHRRLI
Trigger: GATGAGCCGTCGGTGGCCGCATCGTCGGTGGGCAGC...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGTCCATCTGCGAGGCGTaGCCCTTGAGCTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: DLELATPVGGHRSQVLRQSICEA*PLSSAR
Trigger: GCGTGCAGAGCTCAAGGGCCACGCCTCGCAGATGGA...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp CTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCACAAGCCCCACACACAGCTCCTTCAGGGTaGCCTTCATGTCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLSCLSHTGDSMLSQAPHTAPSG*PSCRPG
Trigger: CCCTGGCCGACATGAAGGTCACCCTGAAGGAGCTGT...GTGTGGGGCTTGTGACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGTCTCTGGAGCTTGGGTaGGCCGTACTTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: DLELATPVGGHRSQVLRQSLELG*AVLGRA
Trigger: TGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGA...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGTCGCTCAGCTGCAGCTaGCTCGTCAGCTCCATGACG +
Preference number: 4 (lower is better)
Translates to: DLELATPVGGHRSQVLRQSLSCS*LVSSMT
Trigger: CGTCATGGAGCTGACGAGGCAGCTGCAGCTGAGCGA...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGAAGCCGGCCACGTCCTTaGGCCGGGCTGGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRSRPRP*AGLVMA
Trigger: CGCCATCACCAGCCCGGCCCAAGGACGTGGCCGGCT...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTTGCCGCGGCGGCCTTTaGCCAGAGACCAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVCRGGL*PETSRP
Trigger: TGGCCGGCTGGTCTCTGGCCAAAGGCCGCCGCGGCA...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGCGCACCAGGATGGCGTaGATGAGCTTGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: DLELATPVGGHRSQVLRQRTRMA*MSLASL
Trigger: CAGGGATGCCAAGCTCATCCACGCCATCCTGGTGCG...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GAGGAGCCACGAGTGGCTATAAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTATCCCGTGTGGTaGTGGAGCGAGCCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EEPRVAIRLREALVNRLAGYPVW*WSEPRR
Trigger: CCGCCTGGGCTCGCTCCACCACCACACGGGATAGCC...TGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTTATAGCCACTCGTGGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAAGGCTAGCGAGGCGCTaGGTGGCAAGCGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRRLARR*VASGCC
Trigger: GCAGCAGCCGCTTGCCACTCAGCGCCTCGCTAGCCT...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAAAGAGAAGGCCAGCCTaGCCTCGGGACCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPAKRRPA*PRDPRH
Trigger: GTGGCGGGGGTCCCGAGGCCAGGCTGGCCTTCTCTT...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGATCCACGAACTGCAGGTaGCGCCGCAACTCGGCTAGG +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRSTNCR*RRNSAR
Trigger: CCTAGCCGAGTTGCGGCGCCACCTGCAGTTCGTGGA...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCGCTCTGTCTCCCAGGTaGCCTTGGCCTTTGCGAACT +
Preference number: 4 (lower is better)
Translates to: RPEPATELPQPHGGLHAVALSPR*PWPLRT
Trigger: AGTTCGCAAAGGCCAAGGCCACCTGGGAGACAGAGC...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACGTAGCCCCGCGCCGATaGCTCTCCCGCTGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDVAPRR*LSRWRL
Trigger: GAGACGCCAGCGGGAGAGTCATCGGCGCGGGGCTAC...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTGTCCTCCAGCTCAGCTaGGGAGCGCCTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVVLQLS*GAPQQL
Trigger: GAGCTGCTGAGGCGCTCCTCAGCTGAGCTGGAGGAC...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTCCCGTCAGCCTCGGCTaGCTCCTTGGGCTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: RWECRGISLVLEQTSYAAPVSLG*LLGLGG
Trigger: ACCGCCAAGCCCAAGGAGTCAGCCGAGGCTGACGGG...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTTGGTCGTTCTCCTTGCTCACTGTCTTCCCCTGGAAATCAGAGGTCACTGCCCCAGACTCGGCGTCGCTaGTCAGCGCCAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FGRSPCSLSSPGNQRSLPQTRRR*SAPAPG
Trigger: GCCTGGAGCTGGCGCTGAGCAGCGACGCCGAGTCTG...GGGCAGTGACCTCTGATTTCCAGGGGAAGACAGTGAGCAAGGAGAACGACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GAGGAGCCACGAGTGGCTATAAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCACCTCCAGCTCCACTATaGGCCGGCTCAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EEPRVAIRLREALVNRLAPPAPL*AGSAGW
Trigger: CCAACCTGCTGAGCCGGCGCATAGTGGAGCTGGAGG...TGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTTATAGCCACTCGTGGCTCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTGCTGCCAGCTCCTCCTaGGAGGGCTCGCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: RWECRGISLVLEQTSYAAAASSS*EGSLST
Trigger: CGTGCTCAGCGAGCCCTCGCAGGAGGAGCTGGCAGC...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAGGCGCTGTAGGACTCTaGCAGGAGGTGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRGAVGL*QEVLLL
Trigger: GAGCAGCAACACCTCCTGGCAGAGTCCTACAGCGCC...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACCCGGAGCGCATGGCCTaGCGCACGCAGTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDPERMA*RTQLVI
Trigger: GATCACCAACTGCGTGCGGCAGGCCATGCGCTCCGG...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCCCCCCGCCACCCCCGTaGTCCTTCATGTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASPPPPP*SFMSSI
Trigger: GATGGACGACATGAAGGACCACGGGGGTGGCGGGGG...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GTAGGCACAGACAGGGGTCTCCAGAGCTCCAGGATTCCAAGTGTACTTAGCCCTCGCCGATCTGCAGCTTaGCGGCTGCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VGTDRGLQSSRIPSVLSPRRSAA*RLPAPP
Trigger: AGGAGGAGCTGGCAGCCGCCAAGCTGCAGATCGGCG...AGGGCTAAGTACACTTGGAATCCTGGAGCTCTGGAGACCCCTGTCTGTGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTCGTCCGTCTCCAGCATaGGGCGTGTGCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVRPSPA*GVCSGR
Trigger: CCTGCCAGAGCACACGCCCCATGCTGGAGACGGACG...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAAGGCCTCTCGGATCCTaGGCTCCCACTCAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRRPLGS*APTQAG
Trigger: ACCTGCTTGAGTGGGAGCCCAGGATCCGAGAGGCCT...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCTCATTAGGCGTGTTCTaGGTCCAGCTCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RPEPATELPQPHGGLHAVSLGVF*VQLSPV
Trigger: CACAGGGGAGAGCTGGACCCAGAACACGCCTAATGA...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCCGGAACCCGAGGTGCTaGCCCCGGATCCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASRNPRC*PRILHP
Trigger: TGGATGGAGGATCCGGGGCCAGCACCTCGGGTTCCG...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CAA 72 bp GGTGGTACCAGGCCCCCTTTGGGATCCAGAGCTGACTaGCTGAGCTCTTCAGGTGCTTTTGAGGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GGTRPPLGSRAD*LSSSGAFEAQS
Trigger: GGACTGGGCCTCAAAAGCACCTGAAGAGCTCAGCAAGTCAGCTCTGGATCCCAAAGGGGGCCTGGTACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCACCAGCATCTCCTCGGTaGGGTCGGAGAAGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPAPASPR*GRRRLA
Trigger: CGCTAGCCTTCTCCGACCTCACCGAGGAGATGCTGG...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCCGTCGATGGCCTTGCTaGCCAAAGCGGCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGRRWPC*PKRPAP
Trigger: GGGAGCAGGCCGCTTTGGTCAGCAAGGCCATCGACG...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTCAGGCGGAGGCCGACTaGGAAGCCATTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPQAEAD*EAIGIS
Trigger: GCTGATGCCAATGGCTTCTCAGTCGGCCTCCGCCTG...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTGCCTCGTCAGCTCCATaGCGGCGCTGTAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPASSAP*RRCRTL
Trigger: CAGAGTCCTACAGCGCCGTCATGGAGCTGACGAGGC...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCCTGGCACTTCAGGTCTaGACTATCCTCCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RPEPATELPQPHGGLHAVLALQV*TILLCS
Trigger: ACTGCACAGGAGGATAGTGCAGACCTGAAGTGCCAG...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCTCAGTCTCACGGGAGTaGGGAGCATCCGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASSVSRE*GASASS
Trigger: GGAGCTGGCGGATGCTCCGCACTCCCGTGAGACTGA...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTCTGAGCTCGCCGATCTaGAGCTTGGCGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RWECRGISLVLEQTSYAALSSPI*SLAAAS
Trigger: GCTGGCAGCCGCCAAGCTGCAGATCGGCGAGCTCAG...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCCCAGCATGGGGCGTGTaGTCTGGCAGGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGPAWGV*SGRRPG
Trigger: ACCTGGCCTCCTGCCAGAGCACACGCCCCATGCTGG...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CAGGTGCTGAGACAGTGGAAATGCACAACCCATACAGAGACGATGGTAAGGCTGGGGGCAGGCACGCACTaGGCAGAGTCCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QVLRQWKCTTHTETMVRLGAGTH*AESPAS
Trigger: TGAGGCTGGGGACTCTGCGCAGTGCGTGCCTGCCCC...CAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCTCCTCCTTCCGGAGCTaGCGCTCCTGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGSSFRS*RSWDSC
Trigger: GCAGCTGTCCCAGGAGCGGCAGCTCCGGAAGGAGGA...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTAAGCTCCAGGCCCAACTaGCGCGCCTCCTCCGACGCG +
Preference number: 4 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLSSRPN*RASSDA
Trigger: CGCGTCGGAGGAGGCGCGCCAGTTGGGCCTGGAGCT...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCCTGAAGTCAGGTGGCTaGAAGTCAGAGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RPEPATELPQPHGGLHAVLKSGG*KSEPRS
Trigger: AGACCTTGGCTCTGACTTCCAGCCACCTGACTTCAG...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTCGGAGCTGCCGCTCCTaGGACAGCTGCTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVRSCRS*DSCSCK
Trigger: CTTGCAAGAGCAGCTGTCCCAGGAGCGGCAGCTCCG...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACCCCCGACGCTCGTCCTaGAGCAGCCAGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDPRRSS*SSQHSS
Trigger: GGAGCTGTGCTGGCTGCTCCAGGACGAGCGTCGGGG...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGATCGGCCAGGACCAGCTaGAGATCCTTGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRSARTS*RSLISE
Trigger: CTCTGAGATCAAGGATCTTCAGCTGGTCCTGGCCGA...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTTGGTCGTTCTCCTTGCTCACTGTCTTCCCCTGGAAATCAGAGGTCACTGCCCATCCGCCAGCTCCTCTaGCGACAGGGCTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: FGRSPCSLSSPGNQRSLPIRQLL*RQGCIQ
Trigger: CTGGATGCAGCCCTGTCGGCAGAGGAGCTGGCGGAT...GGGCAGTGACCTCTGATTTCCAGGGGAAGACAGTGAGCAAGGAGAACGACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACGTCACGTCCAGCTCGTaGTCCGAGCGGTATTTGGCC +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDVTSSS*SERYLA
Trigger: GGCCAAATACCGCTCGGAGCACGAGCTGGACGTGAC...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTGCTCAGGCTGCTCCTTaGCAGAGCTCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RWECRGISLVLEQTSYAAAQAAP*QSSPRP
Trigger: TGGCCTTGGGGAGCTCTGGCAAGGAGCAGCCTGAGC...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTCGCTCCTGGGACAGCTaGTCTTGCAAGCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCRSWDS*SCKPRR
Trigger: CCTCCGGGGCTTGCAAGAGCAGCTGTCCCAGGAGCG...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTCTCAGCAGCGCCCTCTaGTGGTCTTCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVLSSAL*WSSFSW
Trigger: CCAGCTGAAGGAAGACCAGCAGAGGGCGCTGCTGAG...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCTGCTGCTCCACCTGCTaGTTTTCTCCCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASCCSTC*FSPCSR
Trigger: GCGGCTGCAGGGAGAAAAGCAGCAGGTGGAGCAGCA...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGATTCTCCATGTCTGAGTaGTTCAGGACCCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRFSMSE*FRTQGS
Trigger: CGAGCCCTGGGTCCTGAAGCACTCAGACATGGAGAA...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACGGCTGCGGTCCTTGGTaGTATCCAGCTTGGACACCG +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDGCGPW*YPAWTP
Trigger: CGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCC...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCTCCTTAGCAGGGCCCTaGGAGCCCAAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGSLAGP*EPKAGR
Trigger: TCTGCCTGCCTTGGGCTCCCAGGGCCCTGCTAAGGA...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GAGGAGCCACGAGTGGCTATAAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCACAAAAGCAGGGCCGTTaGGCAGCTTCTTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: EEPRVAIRLREALVNRLAQKQGR*AASCSG
Trigger: CCCGGAACAAGAAGCTGCCCAACGGCCCTGCTTTTG...TGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTTATAGCCACTCGTGGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGACGGGTTGATGGTAGCTaGCTGGCGAAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRRVDGS*LAKGAL
Trigger: CAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCG...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACGATGGTGTTGCGGGATaGCCGGATGAAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDDGVAG*PDEAGG
Trigger: GCCTCCTGCTTCATCCGGCCATCCCGCAACACCATC...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCACATCTGCCTTGCGGGTaGAGGCGTTCAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPAHLPCG*RRSAPV
Trigger: AACAGGAGCTGAACGCCTTCACCCGCAAGGCAGATG...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAGGACCATTTTCTGGTTaGAGCTGTCAGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRGPFSG*SCQPPP
Trigger: AGGAGGAGGCTGACAGCTTCAACCAGAAAATGGTCC...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTCTCCCTGCAGGTTCCTaGCAGGCCAAGCTACCAATG +
Preference number: 4 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPLPAGS*QAKLPM
Trigger: CATTGGTAGCTTGGCCTGTCAGGAACCTGCAGGGAG...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACCGGGGTGGGTCGGTCTaGAGACCTACACTGACCGTC +
Preference number: 4 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDRGGSV*RPTLTV
Trigger: GACGGTCAGTGTAGGTCTTCAGACCGACCCACCCCG...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTGAAGCAGGAGGCAAGTaGCTGGGCGCTACAGTCACA +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVEAGGK*LGATVT
Trigger: TGTGACTGTAGCGCCCAGTCACTTGCCTCCTGCTTC...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTCTGGCTTGGTCCAGCTaGTGCCGCAACTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSLAWSS*CRNSCS
Trigger: GCTGCAGGAGTTGCGGCAGCAGCTGGACCAAGCCAG...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTTGGGACAGCTGCTCTTaGAAGCCCCGGAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSWDSCS*KPRRLS
Trigger: CGACAGCCTCCGGGGCTTGCAAGAGCAGCTGTCCCA...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCACAAGCCCCACACGGTACAGTTCCTTCATaGTGTTCACCTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLSCLSHTGDSMLSQAPHGTVPS*CSPPGS
Trigger: ACTTCCTGGAGGTGAACAGCATGAAGGAACTGTACC...GTGTGGGGCTTGTGACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTGCCTTCAGCTCCATCTaGGAGGCGTGGCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSAFSSI*EAWPLS
Trigger: GCTCAAGGGCCACGCCTCGCAGATGGAGCTGAAGGC...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTCCGCTCTCTCTGCAGTaGAGCCTTCCAGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCPLSLQ*SLPVRP
Trigger: GGGCCTGACTGGAAGGCTGCACTGCAGAGAGAGCGG...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACTCCTCCCGCTCTCTCTaGAGTGCAGCCTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDSSRSL*SAAFQS
Trigger: TGACTGGAAGGCTGCACTGCAGAGAGAGCGGGAGGA...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTTCTTGCTGTGGAGGCTaGTGCGGGGTGGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSSCCGG*CGVGRS
Trigger: AGACCGACCCACCCCGCAGCAGCCTCCACAGCAAGA...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAAGGAAGAGATCTGCTTaGTGCGCACAGACACAAGCG +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRRKRSA*CAQTQA
Trigger: CGCTTGTGTCTGTGCGCAGCAAGCAGATCTCTTCCT...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTGCAGGTTCCACAGGCTaGGGTCCTTGGTGCTATCCA +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVAGSTG*GPWCYP
Trigger: TGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGC...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGACAGGCGGAGCCATTTTaGTTGCCCTGGTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRQAEPF*LPWCRF
Trigger: GAACCTGCACCAGGGCAAGCAAAATGGCTCCGCCTG...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTTCCACACAGACTCGGTaGTCCCAGAGTGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPSTQTR*SQSAPP
Trigger: TGGTGGAGCACTCTGGGAGCACCGAGTCTGTGTGGA...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCAGTAGTGGGGCTCGGTaGCCGGCCACACACGTTCCG +
Preference number: 4 (lower is better)
Translates to: GKCSALRLNGTGGTRCRASSGAR*PATHVP
Trigger: CGGAACGTGTGTGGCCGGGCACCGAGCCCCACTACT...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACGCAGCTTTCCTCGCCTaGTGCAGTAGTGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDAAFLA*CSSGAR
Trigger: CCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGC...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTGGGGCTCTGGTTTCTTaGAGCTTTCCTCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPGALVS*SFPRLL
Trigger: CAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCC...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTTGCTCCAGTCGCCGCTaGAGGCTCAGACTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCCSSRR*RLRLCS
Trigger: GCTGCAGAGTCTGAGCCTCCAGCGGCGACTGGAGCA...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGATTGTGCTTGAACTGCTaGGACTCCTGCACCAGGATG +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRLCLNC*DSCTRM
Trigger: CATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAA...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAGTCATCCTCTTCGCTaGGCAGAACCTTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASSHPLR*AEPCPA
Trigger: GGCAGGGCAAGGTTCTGCCCAGCGAAGAGGATGACT...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACTCTCCCAGGTGGCCTTaGCCTTTGCGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDSPRWP*PLRTAA
Trigger: AGCAGCAGTTCGCAAAGGCCAAGGCCACCTGGGAGA...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp CAGGTGCTGAGACAGTGGAAATGCACAACCCATACAGAGACGATGGTAAGGCTGTTCTCCTGGCTCCAGTaGCGCTCGCTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QVLRQWKCTTHTETMVRLFSWLQ*RSLSCS
Trigger: GCTGCAGCTGAGCGAGCGCCACTGGAGCCAGGAGAA...CAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAGATTCCCGTCTTGTCTaGAGCCGTGTAGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRDSRLV*SRVAAL
Trigger: CAGCGCAGCTACACGGCTCCAGACAAGACGGGAATC...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTTTGCCCTCCTTGTCATaGACCACAGGGACACCCAGG +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVLPSLS*TTGTPR
Trigger: CCTGGGTGTCCCTGTGGTCCATGACAAGGAGGGCAA...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTGAGGCTGCTGCGGGGTaGGTCGGTCTGAAGACCTAC +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSEAAAG*VGLKTY
Trigger: GTAGGTCTTCAGACCGACCCACCCCGCAGCAGCCTC...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTCCAGCTCTGTCTCAATaGGCCTCTGTCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RWECRGISLVLEQTSYAAPALSQ*ASVEAP
Trigger: AGGGGCTTCGACAGAGGCTCATTGAGACAGAGCTGG...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCCCTTCTGCAACTGACTaGGGCGGTTCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGPSATD*GGSAAP
Trigger: AGGAGCTGCAGAACCGCCTCAGTCAGTTGCAGAAGG...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTGCCGCACGCAGTTGGTaGTCTCCTTCATGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: RWECRGISLVLEQTSYAAAARSW*SPSCRH
Trigger: GTGACGACATGAAGGAGATCACCAACTGCGTGCGGC...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTCTGCATCTGTCTCCCTaGAGGTTCCTGACAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPLHLSP*RFLTGQ
Trigger: TTGGCCTGTCAGGAACCTGCAGGGAGACAGATGCAG...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACCTGGAGCCGTGTAGCTaGGCTGCATCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDLEPCS*AASVSL
Trigger: CAGGGAGACAGATGCAGCGCAGCTACACGGCTCCAG...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACACACAAGCGAGGAGCTaGGGGGTGACCAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDTQARS*GVTSSC
Trigger: GCAAGAGCTGGTCACCCCGCAGCTCCTCGCTTGTGT...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GTAGGCACAGACAGGGGTCTCCAGAGCTCCAGGATTCCAAGTGTACTTAGCCCTTCGGTGCTCCCAGAGTaGTCCACCACACTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: VGTDRGLQSSRIPSVLSPSVLPE*STTLKR
Trigger: CCTCTTTAGTGTGGTGGAGCACTCTGGGAGCACCGA...AGGGCTAAGTACACTTGGAATCCTGGAGCTCTGGAGACCCCTGTCTGTGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGACTCTTCGCTACCACCTaGCTTGGCCGCCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRLFATT*LGRLLV
Trigger: AACAAGAAGGCGGCCAAGGCAGGTGGTAGCGAAGAG...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCTTTGCAAAATGCAGCTaGCACTTCAGGTCTGCACTA +
Preference number: 4 (lower is better)
Translates to: RPEPATELPQPHGGLHAVFAKCS*HFRSAL
Trigger: TAGTGCAGACCTGAAGTGCCAGCTGCATTTTGCAAA...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCGCTCCGAGCGGTATTTaGCCAGCTCGTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGAPSGI*PARSAA
Trigger: TGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGC...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTAGCAGCGCCCTCTGCTaGTCTTCCTTCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSSSALC*SSFSWT
Trigger: GGTCCAGCTGAAGGAAGACCAGCAGAGGGCGCTGCT...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTAGGCTACAGTCCCGGGTaGAAAGCCCCGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLGYSPG*KAPPSP
Trigger: AGGAGAAGGCGGGGCTTTCCACCCGGGACTGTAGCC...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GTAGGCACAGACAGGGGTCTCCAGAGCTCCAGGATTCCAAGTGTACTTAGCCCTGCCAAGCTACCAATGTaGCTACAGTCCCGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: VGTDRGLQSSRIPSVLSPAKLPM*LQSRVE
Trigger: TTCCACCCGGGACTGTAGCCACATTGGTAGCTTGGC...AGGGCTAAGTACACTTGGAATCCTGGAGCTCTGGAGACCCCTGTCTGTGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAAGTGAAGAGGAAGCCTaGCTCAATGAGGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRSEEEA*LNEDLA
Trigger: GGCAAGATCCTCATTGAGCCAGGCTTCCTCTTCACT...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTACAGGCTGCGGTCCTTaGTGCTATCCAGCTTGGACA +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVTGCGP*CYPAWT
Trigger: TGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGT...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACAGAGCGATCTGTACTTaGGCAGCTCCTCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDRAICT*AAPPSC
Trigger: GCATGAAGGAGGAGCTGCTCAAGTACAGATCGCTCT...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTTGGTCGTTCTCCTTGCTCACTGTCTTCCCCTGGAAATCAGAGGTCACTGCCCGGATGCGACAGGTTTTaGTGGCTTGGTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FGRSPCSLSSPGNQRSLPGCDRF*WLGPAA
Trigger: AGCAGCTGGACCAAGCCAGCAAAACCTGTCGCATCC...GGGCAGTGACCTCTGATTTCCAGGGGAAGACAGTGAGCAAGGAGAACGACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTTCCACCAGCTTCAGGTaGACCTTCAGCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVSTSFR*TFSSVS
Trigger: TGAGACTGAGCTGAAGGTGCACCTGAAGCTGGTGGA...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCTGGCTCCAGAACTTCTaGTCCAGTCGCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GKCSALRLNGTGGTRCRAWLQNF*SSRRWR
Trigger: CCTCCAGCGGCGACTGGAGCAGAAGTTCTGGAGCCA...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAAAGTTGTGCTTGAACTaGTGGGACTCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRKLCLN*WDSCTR
Trigger: CCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTT...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGAGCCTTGTTATCCGAGTaGTGGGCGTTCATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRALLSE*WAFISS
Trigger: AGAGGAGATGAACGCCCAGCACTCGGATAACAAGGC...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCGGTGGCCTTGGCCTTTaGGAACTGCTGCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGGGLGL*ELLLKF
Trigger: GAACTTCAGCAGCAGTTCGCAAAGGCCAAGGCCACC...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTAGTGGCCCTTGAGCTCTaGACGCTCTGTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLVALEL*TLCLPG
Trigger: ACCTGGGAGACAGAGCGTGCAGAGCTCAAGGGCCAC...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTTTTTGCTTGCCCTGGTaGAGGTTCCACAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSFCLPW*RFHRLR
Trigger: CCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAA...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGATTCGGGCCTCAGACATaGCCAGTTTCCACACAGACT +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRFGPQT*PVSTQT
Trigger: AGTCTGTGTGGAAACTGGGCATGTCTGAGGCCCGAA...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTACTCCATCCCGAAGGATaGCATCCTTCCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLLHPEG*HPSPPG
Trigger: CCCAGGTGGGGAAGGATGGCATCCTTCGGGATGGAG...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCCACTTGGAAGGAGAGTaGCGGATGGTGTTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGHLEGE*RMVLRD
Trigger: ATCCCGCAACACCATCCGGCACTCTCCTTCCAAGTG...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp CAGGTGCTGAGACAGTGGAAATGCACAACCCATACAGAGACGATGGTAAGGCTGCAGGTTTTGCTGGCTTaGTCCAGCTGCTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: QVLRQWKCTTHTETMVRLQVLLA*SSCCRN
Trigger: GTTGCGGCAGCAGCTGGACCAAGCCAGCAAAACCTG...CAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TTTGGTCGTTCTCCTTGCTCACTGTCTTCCCCTGGAAATCAGAGGTCACTGCCCCGACTGAGAAGCCATTaGCATCAGCCACCAGGACGT +
Preference number: 4 (lower is better)
Translates to: FGRSPCSLSSPGNQRSLPRLRSH*HQPPGR
Trigger: ACGTCCTGGTGGCTGATGCCAATGGCTTCTCAGTCG...GGGCAGTGACCTCTGATTTCCAGGGGAAGACAGTGAGCAAGGAGAACGACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAGTCTCTGAAGTCAGGTaGCTGGAAGTCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRVSEVR*LEVRAK
Trigger: CTTGGCTCTGACTTCCAGCCACCTGACTTCAGAGAC...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGAACACCCTCCTTGTCATaGGTCTTCTCACTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRTPSLS*VFSLRA
Trigger: GGCACGAAGTGAGAAGACCCATGACAAGGAGGGTGT...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGACGCCTACCGTCTGGCTaGATGTGTTCTTTACCTTCC +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRRLPSG*MCSLPS
Trigger: GGAAGGTAAAGAACACATCCAGCCAGACGGTAGGCG...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GTAGGCACAGACAGGGGTCTCCAGAGCTCCAGGATTCCAAGTGTACTTAGCCCTTGGCGAAAGGGGCTCTaGTTTCTTGCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGTDRGLQSSRIPSVLSPWRKGL*FLAAFL
Trigger: GAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCA...AGGGCTAAGTACACTTGGAATCCTGGAGCTCTGGAGACCCCTGTCTGTGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GTAGGCACAGACAGGGGTCTCCAGAGCTCCAGGATTCCAAGTGTACTTAGCCCTTTGATGGTAGCTGGCTaGCGAAAGGGGCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VGTDRGLQSSRIPSVLSPLMVAG*RKGLWF
Trigger: AAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAA...AGGGCTAAGTACACTTGGAATCCTGGAGCTCTGGAGACCCCTGTCTGTGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
3UTR CAA 72 bp TCTGAACCCTACATACTCCTACCTGCCTCCCAGTTCTaGCTACATGTAGGCACAGACAGGGGTCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SEPYILLPASQF*LHVGTDRGLQS
Trigger: GCTCTGGAGACCCCTGTCTGTGCCTACATGTAGCAAGAACTGGGAGGCAGGTAGGAGTATGTAGGGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTAACCTCCAGCTCCTTGTaGAGCCGCATGGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLTSSSL*SRMEMS
Trigger: GGACATCTCCATGCGGCTTCACAAGGAGCTGGAGGT...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTGGAAGCCTGGCTCAATaGGGATCTTGCCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCGSLAQ*GSCPPC
Trigger: ACAAGGAGGGCAAGATCCTCATTGAGCCAGGCTTCC...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAAACTGCTGGGACTCCTaGACCAGGATGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRNCWDS*TRMFFS
Trigger: AGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTT...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCGACATCTCAAAGTCATaGAAGGCGGGGAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASDISKS*KAGKAG
Trigger: ACCTGCTTTCCCCGCCTTGCATGACTTTGAGATGTC...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACAACATGGCCGCTCAATaGGAGAATGGACCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDNMAAQ*ENGPCP
Trigger: TGGACAAGGTCCATTCTCGCATTGAGCGGCCATGTT...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTCGGAGCCATTTTGCTTaGCCTGGTGCAGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSRSHFA*PGAGST
Trigger: TGTGGAACCTGCACCAGGGCAAGCAAAATGGCTCCG...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCTGCGACAGGTTTTGCTaGCTTGGTCCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GKCSALRLNGTGGTRCRACDRFC*LGPAAA
Trigger: GGCAGCAGCTGGACCAAGCCAGCAAAACCTGTCGCA...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCCACAGCGCTGCAGATTaGAGAGGAGCACGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GKCSALRLNGTGGTRCRAHSAAD*RGARGS
Trigger: AGAACCGCGTGCTCCTCTCCAATCTGCAGCGCTGTG...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp ATGTCCAGAGGCTTCCATAGGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAGCTGGACCATTTTCTaGTTGAAGCTGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MSRGFHRDSDKWPCTVASSWTIF*LKLSAS
Trigger: GGAGGCTGACAGCTTCAACCAGAAAATGGTCCAGCT...GCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCCTATGGAAGCCTCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTACGCAACTCCTGCAGCTaGTACACGTCTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLRNSCS*YTSSSM
Trigger: CATGGAGGAAGACGTGTATCAGCTGCAGGAGTTGCG...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTGCAGAAAGTTGTGCTTaGACTGCTGGGACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCAESCA*TAGTPA
Trigger: TGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGC...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCACCACCGGAGCTTCATaGAGAGCAGCAGAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGTTGAS*RAAESC
Trigger: ACAACTTTCTGCTGCTCTTCATGAAGCTCCGGTGGT...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR TCA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGATTCCGGAAGAACTCCTaGACAATGCCATACTTGGGA +
Preference number: 4 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRFRKNS*TMPYLG
Trigger: TCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGAA...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTATCCGTCTGTAGCACCTaGTTGGCCAGCTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLSVCST*LASSVS
Trigger: TGAGACAGAGCTGGCCAAGCAGGTGCTACAGACGGA...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGCAGCAGAAAGTTGTaGTTGAACTGCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGSSRKL*LNCWDS
Trigger: GGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCT...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GCTGAGATAGATGCTACCATTTTTGTTCTCATGTACTACAAAAGTTGGGCCCTCCGCTGGGCAGAACCTTaGCCTGCCGCCAGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: AEIDATIFVLMYYKSWALRWAEP*PAASAS
Trigger: TGAAGCGCTGGCGGCAGGGCAAGGTTCTGCCCAGCG...GAGGGCCCAACTTTTGTAGTACATGAGAACAAAAATGGTAGCATCTATCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACTTCCAGCTGTTGTCTTaGTTCTCCATGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LWPGVVPSARNNLRGASDFQLLS*FSMSEC
Trigger: GCACTCAGACATGGAGAAGCAAGACAACAGCTGGAA...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCGGTCTTCTCACTTCGTaGCTCTTTCCAGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGGLLTS*LFPAVV
Trigger: GACAACAGCTGGAAAGAGGCACGAAGTGAGAAGACC...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTAAGAGATCTGCTTGCTaGGCACAGACACAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSKRSAC*AQTQAR
Trigger: CCTCGCTTGTGTCTGTGCGCAGCAAGCAGATCTCTT...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACAGGGAGGAAGAGATCTaGTTGCTGCGCACAGACACA +
Preference number: 4 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDREEEI*LLRTDT
Trigger: TGTGTCTGTGCGCAGCAAGCAGATCTCTTCCTCCCT...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTTTGTTATCCGAGTGCTaGGCGTTCATCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RWECRGISLVLEQTSYAALLSEC*AFISSS
Trigger: GGAAGAGGAGATGAACGCCCAGCACTCGGATAACAA...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAACATTTTCAACCCCACTGAGCCCTATGTCCAGAGGCTTCCATAGGGACAGTCGCTCAATGCGAGAATaGACCTTGTCCAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GTFSTPLSPMSRGFHRDSRSMRE*TLSREE
Trigger: TTCCTCCCTGGACAAGGTCCATTCTCGCATTGAGCG...ACTGTCCCTATGGAAGCCTCTGGACATAGGGCTCAGTGGGGTTGAAAATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTGAACAATGCCATACTTaGGAGGCTCAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVEQCHT*EAQVWF
Trigger: GAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTC...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGATCTTGTTCAGGATCCTaGATACACCCTCGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRSCSGS*IHPRVD
Trigger: ATCAACCCGAGGGTGTATCCAGGATCCTGAACAAGA...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCATGTCGTCACTCATGTTaGCCGACATCTCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPACRHSC*PTSQSH
Trigger: ATGACTTTGAGATGTCGGGCAACATGAGTGACGACA...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp GCTGAGATAGATGCTACCATTTTTGTTCTCATGTACTACAAAAGTTGGGCCCTCTGCTGTGGAGGCTGCTaGGGGGTGGGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: AEIDATIFVLMYYKSWALCCGGC*GVGRSE
Trigger: TTCAGACCGACCCACCCCGCAGCAGCCTCCACAGCA...GAGGGCCCAACTTTTGTAGTACATGAGAACAAAAATGGTAGCATCTATCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GCTGAGATAGATGCTACCATTTTTGTTCTCATGTACTACAAAAGTTGGGCCCTCATGGGGCGTGTGCTCTaGCAGGAGGCCAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AEIDATIFVLMYYKSWALMGRVL*QEARSQ
Trigger: CTGTGACCTGGCCTCCTGCCAGAGCACACGCCCCAT...GAGGGCCCAACTTTTGTAGTACATGAGAACAAAAATGGTAGCATCTATCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTTGGAGGAGACTGATTTaGTCCTCTTTAAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVWRRLI*SSLSQF
Trigger: GAACTGGCTTAAAGAGGACCAAATCAGTCTCCTCCA...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GCTGAGATAGATGCTACCATTTTTGTTCTCATGTACTACAAAAGTTGGGCCCTCCAGGCGCCGGGCCACTaGCGGACTATAGTAGACTCG +
Preference number: 4 (lower is better)
Translates to: AEIDATIFVLMYYKSWALQAPGH*RTIVDS
Trigger: CGAGTCTACTATAGTCCGCCAGTGGCCCGGCGCCTG...GAGGGCCCAACTTTTGTAGTACATGAGAACAAAAATGGTAGCATCTATCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR GCA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTAGAACTCCTGAACAATaGCATACTTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCRTPEQ*HTWEAQ
Trigger: CTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCT...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GCTGAGATAGATGCTACCATTTTTGTTCTCATGTACTACAAAAGTTGGGCCCTCATCGTCTCTGGAGCTTaGGTGAGCCGTACTTGGGCG +
Preference number: 4 (lower is better)
Translates to: AEIDATIFVLMYYKSWALIVSGA*VSRTWA
Trigger: CGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGAT...GAGGGCCCAACTTTTGTAGTACATGAGAACAAAAATGGTAGCATCTATCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CCA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCTGGTCTTCCTTCAGCTaGACCATTTTCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GKCSALRLNGTGGTRCRAWSSFS*TIFWLK
Trigger: CTTCAACCAGAAAATGGTCCAGCTGAAGGAAGACCA...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CGGTGCGGGTCCCCGCCGGGCCGCCCGCCGCAGACTCGGCGTCGCTaGTCAGCGCCAGCTCCAGGCCCAACTGGCGCGCCTCCTCCGACG +
Preference number: 5 (lower is better)
Translates to: RCGSPPGRPPQTRRR*SAPAPGPTGAPPPT
Trigger: CGTCGGAGGAGGCGCGCCAGTTGGGCCTGGAGCTGGCGCTGAGCAGCGACGCCGAGTCTGCGGCGGGCGGCCCGGCGGGGACCCGCACCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GCGCCTCCTCCGACGCGCAGTCCGACACCTCGGAGCTACTGTCCGTaGGGCTGGGCGGCGGCGGCGGCGGGCGGGGCCCGGTACCGGGAC +
Preference number: 5 (lower is better)
Translates to: APPPTRSPTPRSYCP*GWAAAAAGGARYRD
Trigger: GTCCCGGTACCGGGCCCCGCCCGCCGCCGCCGCCGCCCAGCCTCACGGACAGTAGCTCCGAGGTGTCGGACTGCGCGTCGGAGGAGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CGGCCTGCTCCCGTAGGCCGGGCAGCGCCTCGGCTTCACGGGCCCTaGACAGCCGGGCGGCGTGGGGCTCCAGCGTCTCACCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: RPAPVGRAAPRLHGP*TAGRRGAPASHPEG
Trigger: CCCCTCTGGGTGAGACGCTGGAGCCCCACGCCGCCCGGCTGTGCAGGGCCCGTGAAGCCGAGGCGCTGCCCGGCCTACGGGAGCAGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GCCTTTGGCCAGAGACCAGCCGGCCACGTCCTTGGGCCGGGCTGGTaGTGGCGCGCGGTGGCTTTTCTTCCTCTCCGCGGCGGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: AFGQRPAGHVLGPGW*WRAVAFLPLRGGRG
Trigger: CCCGCGCCCGCCGCGGAGAGGAAGAAAAGCCACCGCGCGCCATCACCAGCCCGGCCCAAGGACGTGGCCGGCTGGTCTCTGGCCAAAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CTGTGCCGCGGCGGCCTTTGGCCAGAGACCAGCCGGCCACGTCCTTaGGCCGGGCTGGTGATGGCGCGCGGTGGCTTTTCTTCCTCTCCG +
Preference number: 5 (lower is better)
Translates to: LCRGGLWPETSRPRP*AGLVMARGGFSSSP
Trigger: CGGAGAGGAAGAAAAGCCACCGCGCGCCATCACCAGCCCGGCCCAAGGACGTGGCCGGCTGGTCTCTGGCCAAAGGCCGCCGCGGCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GCATCAGCCACCAGGACGTCGATGGCCTTGCTGACCAAAGCGGCCTaGTCCCGTAGGCCGGGCAGCGCCTCGGCTTCACGGGCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: ASATRTSMALLTKAA*SRRPGSASASRALH
Trigger: GTGCAGGGCCCGTGAAGCCGAGGCGCTGCCCGGCCTACGGGAGCAGGCCGCTTTGGTCAGCAAGGCCATCGACGTCCTGGTGGCTGATGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GGCTCCAGTGGCGCTCGCTCAGCTGCAGCTGCCTCGTCAGCTCCATaGCGGCGCTGTAGGACTCTGCCAGGAGGTGTTGCTGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: GSSGARSAAAASSAP*RRCRTLPGGVAAPP
Trigger: GGGAGGAGCAGCAACACCTCCTGGCAGAGTCCTACAGCGCCGTCATGGAGCTGACGAGGCAGCTGCAGCTGAGCGAGCGCCACTGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp TGCTGTGGAGGCTGCTGCGGGGTGGGTCGGTCTGAAGACCTACACTaGCCGTCCGAATGGTCTGGGTGCCCACGGTGGCCACGCCTACCG +
Preference number: 5 (lower is better)
Translates to: CCGGCCGVGRSEDLH*PSEWSGCPRWPRLP
Trigger: CGGTAGGCGTGGCCACCGTGGGCACCCAGACCATTCGGACGGTCAGTGTAGGTCTTCAGACCGACCCACCCCGCAGCAGCCTCCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TGGGCAGCGCGGAGGCTGCGGCGCTCAGCCTTACGCAGTCGGTACTaGAGGATGCGACAGGTTTTGCTGGCTTGGTCCAGCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: WAARRLRRSALRSRY*RMRQVLLAWSSCCR
Trigger: GCGGCAGCAGCTGGACCAAGCCAGCAAAACCTGTCGCATCCTGCAGTACCGACTGCGTAAGGCTGAGCGCCGCAGCCTCCGCGCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GCGCAGAGTCCCCAGCCTCAGCGTCCGTCTCCAGCATGGGGCGTGTaGTCTGGCAGGAGGCCAGGTCACAGCGCTGCAGATTGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: AQSPQPQRPSPAWGV*SGRRPGHSAADWRG
Trigger: TCCTCTCCAATCTGCAGCGCTGTGACCTGGCCTCCTGCCAGAGCACACGCCCCATGCTGGAGACGGACGCTGAGGCTGGGGACTCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp AGGTGCTGGCCCCGGATCCTCCATCCAGCCGCTGCCGGGAGAAATTaGAAAGCCACCGGCTGTAGGAGCTCTCGGCCAGCCCGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: RCWPRILHPAAAGRN*KATGCRSSRPARQP
Trigger: AGGCTGACGGGCTGGCCGAGAGCTCCTACAGCCGGTGGCTTTGCAATTTCTCCCGGCAGCGGCTGGATGGAGGATCCGGGGCCAGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp GAGGAGCGCCTCAGCAGCTCAGCCTCCTCTTCCACGAACTGCAGGTaGCGCCGCAACTCGGCTAGGCTCTCCCCGCACTCACCACCCAGA +
Preference number: 5 (lower is better)
Translates to: EERLSSSASSSTNCR*RRNSARLSPHSPPR
Trigger: TCTGGGTGGTGAGTGCGGGGAGAGCCTAGCCGAGTTGCGGCGCCACCTGCAGTTCGTGGAAGAGGAGGCTGAGCTGCTGAGGCGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp CTGAGAAGCCATTGGCATCAGCCACCAGGACGTCGATGGCCTTGCTaGCCAAAGCGGCCTGCTCCCGTAGGCCGGGCAGCGCCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: LRSHWHQPPGRRWPC*PKRPAPVGRAAPRL
Trigger: AAGCCGAGGCGCTGCCCGGCCTACGGGAGCAGGCCGCTTTGGTCAGCAAGGCCATCGACGTCCTGGTGGCTGATGCCAATGGCTTCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GGTGACCAGCTCTTGCTGTGGAGGCTGCTGCGGGGTGGGTCGGTCTaGAGACCTACACTGACCGTCCGAATGGTCTGGGTGCCCACGGTG +
Preference number: 5 (lower is better)
Translates to: GDQLLLWRLLRGGSV*RPTLTVRMVWVPTV
Trigger: CACCGTGGGCACCCAGACCATTCGGACGGTCAGTGTAGGTCTTCAGACCGACCCACCCCGCAGCAGCCTCCACAGCAAGAGCTGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TGCTGCGCACAGACACAAGCGAGGAGCTGCGGGGTGACCAGCTCTTaGTGTGGAGGCTGCTGCGGGGTGGGTCGGTCTGAAGACCTACAC +
Preference number: 5 (lower is better)
Translates to: CCAQTQARSCGVTSS*CGGCCGVGRSEDLH
Trigger: GTGTAGGTCTTCAGACCGACCCACCCCGCAGCAGCCTCCACAGCAAGAGCTGGTCACCCCGCAGCTCCTCGCTTGTGTCTGTGCGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GGGAGGAAGAGATCTGCTTGCTGCGCACAGACACAAGCGAGGAGCTaGGGGGTGACCAGCTCTTGCTGTGGAGGCTGCTGCGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GRKRSACCAQTQARS*GVTSSCCGGCCGVG
Trigger: ACCCACCCCGCAGCAGCCTCCACAGCAAGAGCTGGTCACCCCGCAGCTCCTCGCTTGTGTCTGTGCGCAGCAAGCAGATCTCTTCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GCTGGCTGGCGAAAGGGGCTCTGGTTTCTTGCAGCTTTCCTCGCCTaGTGCAGTAGTGGGGCTCGGTGCCCGGCCACACACGTTCCGGAA +
Preference number: 5 (lower is better)
Translates to: AGWRKGLWFLAAFLA*CSSGARCPATHVPE
Trigger: TTCCGGAACGTGTGTGGCCGGGCACCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp GCGTTCAGCTCCTGTTGCAACACACTCAGCCGCACCAGGATGGCGTaGATGAGCTTGGCATCCCTGGGGCCCTCGCTGTTGTCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: AFSSCCNTLSRTRMA*MSLASLGPSLLSGA
Trigger: GGCGCCTGACAACAGCGAGGGCCCCAGGGATGCCAAGCTCATCCACGCCATCCTGGTGCGGCTGAGTGTGTTGCAACAGGAGCTGAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp TCAGCTCCTGTTGCAACACACTCAGCCGCACCAGGATGGCGTGGATaGGCTTGGCATCCCTGGGGCCCTCGCTGTTGTCAGGCGCCTCGT +
Preference number: 5 (lower is better)
Translates to: SAPVATHSAAPGWRG*AWHPWGPRCCQAPR
Trigger: ACGAGGCGCCTGACAACAGCGAGGGCCCCAGGGATGCCAAGCTCATCCACGCCATCCTGGTGCGGCTGAGTGTGTTGCAACAGGAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GCACGCTCTGTCTCCCAGGTGGCCTTGGCCTTTGCGAACTGCTGCTaGAGTTCAGTCAGACCCCGACGCTCGTCCTGGAGCAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: ARSVSQVALAFANCC*SSVRPRRSSWSSQH
Trigger: GTGCTGGCTGCTCCAGGACGAGCGTCGGGGTCTGACTGAACTTCAGCAGCAGTTCGCAAAGGCCAAGGCCACCTGGGAGACAGAGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp AAGCCACCGGCTGTAGGAGCTCTCGGCCAGCCCGTCAGCCTCGGCTaGCTCCTTGGGCTTGGCGGTAGTGAAGAGGAAGCCTGGCTCAAT +
Preference number: 5 (lower is better)
Translates to: KPPAVGALGQPVSLG*LLGLGGSEEEAWLN
Trigger: ATTGAGCCAGGCTTCCTCTTCACTACCGCCAAGCCCAAGGAGTCAGCCGAGGCTGACGGGCTGGCCGAGAGCTCCTACAGCCGGTGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CTCACGGGAGTGCGGAGCATCCGCCAGCTCCTCTGCCGACAGGGCTaGATCCAGGTCCCCATAGAGCGATCTGTACTTGAGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LTGVRSIRQLLCRQG*IQVPIERSVLEQLL
Trigger: GAGGAGCTGCTCAAGTACAGATCGCTCTATGGGGACCTGGATGCAGCCCTGTCGGCAGAGGAGCTGGCGGATGCTCCGCACTCCCGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp ATGAGCTTGGCATCCCTGGGGCCCTCGCTGTTGTCAGGCGCCTCGTaGAGTCGCAAGTCAGCACACTCATTGTCCAGGCACAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: MSLASLGPSLLSGAS*SRKSAHSLSRHRRR
Trigger: CCTCCGCCTGTGCCTGGACAATGAGTGTGCTGACTTGCGACTGCACGAGGCGCCTGACAACAGCGAGGGCCCCAGGGATGCCAAGCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CTTCCCAGCCTTCAGCTCCATCTGCGAGGCGTGGCCCTTGAGCTCTaGACGCTCTGTCTCCCAGGTGGCCTTGGCCTTTGCGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LPSLQLHLRGVALEL*TLCLPGGLGLCELL
Trigger: CAGCAGTTCGCAAAGGCCAAGGCCACCTGGGAGACAGAGCGTGCAGAGCTCAAGGGCCACGCCTCGCAGATGGAGCTGAAGGCTGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TCTCAAAGTCATGCAAGGCGGGGAAAGCAGGTCCGGAACCCGAGGTaGTGGCCCCGGATCCTCCATCCAGCCGCTGCCGGGAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: SQSHARRGKQVRNPR*WPRILHPAAAGRNC
Trigger: GCAATTTCTCCCGGCAGCGGCTGGATGGAGGATCCGGGGCCAGCACCTCGGGTTCCGGACCTGCTTTCCCCGCCTTGCATGACTTTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GTGGTGGTGGAGCGAGCCCAGGCGGAGCCATTTTGCTTGCCCTGGTaGAGGTTCCACAGGCTGCGGTCCTTGGTGCTATCCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: VVVERAQAEPFCLPW*RFHRLRSLVLSSLD
Trigger: GTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAATGGCTCCGCCTGGGCTCGCTCCACCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GGCTGGCGAAAGGGGCTCTGGTTTCTTGCAGCTTTCCTCGCCTGCTaGAGTAGTGGGGCTCGGTGCCCGGCCACACACGTTCCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: GWRKGLWFLAAFLAC*SSGARCPATHVPEE
Trigger: TTCTTCCGGAACGTGTGTGGCCGGGCACCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp GCCCTCCTTGTCATGGACCACAGGGACACCCAGGCGCCGGGCCACTaGCGGACTATAGTAGACTCGGATTCCCGTCTTGTCTGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: ALLVMDHRDTQAPGH*RTIVDSDSRLVWSR
Trigger: ACGGCTCCAGACAAGACGGGAATCCGAGTCTACTATAGTCCGCCAGTGGCCCGGCGCCTGGGTGTCCCTGTGGTCCATGACAAGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp ACCGTCCGAATGGTCTGGGTGCCCACGGTGGCCACGCCTACCGTCTaGCTGGATGTGTTCTTTACCTTCCTCTCCAGAGAGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: TVRMVWVPTVATPTV*LDVFFTFLSREPER
Trigger: GCGCTCCGGCTCTCTGGAGAGGAAGGTAAAGAACACATCCAGCCAGACGGTAGGCGTGGCCACCGTGGGCACCCAGACCATTCGGACGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTGTGCCGCGGCGGCCTTaGGCCAGAGACCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RWECRGISLVLEQTSYAAVPRRP*ARDQPA
Trigger: GGCCGGCTGGTCTCTGGCCAAAGGCCGCCGCGGCAC...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCGTCTCCCAGGTGGCCTaGGCCTTTGCGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: RPEPATELPQPHGGLHAVVSQVA*AFANCC
Trigger: GCAGCAGTTCGCAAAGGCCAAGGCCACCTGGGAGAC...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GCTGCTCCTTGCCAGAGCTCCCCAAGGCCACATCTGCCTTGCGGGTaGAGGCGTTCAGCTCCTGTTGCAACACACTCAGCCGCACCAGGA +
Preference number: 5 (lower is better)
Translates to: AAPCQSSPRPHLPCG*RRSAPVATHSAAPG
Trigger: TCCTGGTGCGGCTGAGTGTGTTGCAACAGGAGCTGAACGCCTTCACCCGCAAGGCAGATGTGGCCTTGGGGAGCTCTGGCAAGGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TGGACCATTTTCTGGTTGAAGCTGTCAGCCTCCTCCTTCCGGAGCTaGCGCTCCTGGGACAGCTGCTCTTGCAAGCCCCGGAGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: WTIFWLKLSASSFRS*RSWDSCSCKPRRLS
Trigger: CGACAGCCTCCGGGGCTTGCAAGAGCAGCTGTCCCAGGAGCGGCAGCTCCGGAAGGAGGAGGCTGACAGCTTCAACCAGAAAATGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GCCCTTGAGCTCTGCACGCTCTGTCTCCCAGGTGGCCTTGGCCTTTaGGAACTGCTGCTGAAGTTCAGTCAGACCCCGACGCTCGTCCTG +
Preference number: 5 (lower is better)
Translates to: ALELCTLCLPGGLGL*ELLLKFSQTPTLVL
Trigger: CAGGACGAGCGTCGGGGTCTGACTGAACTTCAGCAGCAGTTCGCAAAGGCCAAGGCCACCTGGGAGACAGAGCGTGCAGAGCTCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp TCCGAATGGTCTGGGTGCCCACGGTGGCCACGCCTACCGTCTGGCTaGATGTGTTCTTTACCTTCCTCTCCAGAGAGCCGGAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: SEWSGCPRWPRLPSG*MCSLPSSPESRSAW
Trigger: CCATGCGCTCCGGCTCTCTGGAGAGGAAGGTAAAGAACACATCCAGCCAGACGGTAGGCGTGGCCACCGTGGGCACCCAGACCATTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CCTGGTGCAGGTTCCACAGGCTGCGGTCCTTGGTGCTATCCAGCTTaGACACCGATCGTCTCTGGAGCTTGGGTGAGCCGTACTTGGGCG +
Preference number: 5 (lower is better)
Translates to: PGAGSTGCGPWCYPA*TPIVSGAWVSRTWA
Trigger: CGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TTTGGTCGTTCTCCTTGCTCACTGTCTTCCCCTGGAAATCAGAGGTCACTGCCCCAGCCGGCCACGTCCTaGGGCCGGGCTGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: FGRSPCSLSSPGNQRSLPQPATS*GRAGDG
Trigger: GCCATCACCAGCCCGGCCCAAGGACGTGGCCGGCTG...GGGCAGTGACCTCTGATTTCCAGGGGAAGACAGTGAGCAAGGAGAACGACCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGTGCTCCGAGCGGTATTaGGCCAGCTCGTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: DLELATPVGGHRSQVLRQCSERY*ASSFSS
Trigger: GCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCA...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGTCGCTACCACCTGCCTaGGCCGCCTTCTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: DLELATPVGGHRSQVLRQSLPPA*AAFLFR
Trigger: CCTGAACAAGAAGGCGGCCAAGGCAGGTGGTAGCGA...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GGCCAGCTCGTTCAGCAGCAACTTGTTCTGGTCCTCCAGCTCAGCTaGGGAGCGCCTCAGCAGCTCAGCCTCCTCTTCCACGAACTGCAG +
Preference number: 5 (lower is better)
Translates to: GQLVQQQLVLVLQLS*GAPQQLSLLFHELQ
Trigger: CTGCAGTTCGTGGAAGAGGAGGCTGAGCTGCTGAGGCGCTCCTCAGCTGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CTTCAGCTCAGTCTCACGGGAGTGCGGAGCATCCGCCAGCTCCTCTaGCGACAGGGCTGCATCCAGGTCCCCATAGAGCGATCTGTACTT +
Preference number: 5 (lower is better)
Translates to: LQLSLTGVRSIRQLL*RQGCIQVPIERSVL
Trigger: AAGTACAGATCGCTCTATGGGGACCTGGATGCAGCCCTGTCGGCAGAGGAGCTGGCGGATGCTCCGCACTCCCGTGAGACTGAGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CTGAGCACGGAGCAGCTGTCCTCCGACAGCGTCACGTCCAGCTCGTaGTCCGAGCGGTATTTGGCCAGCTCGTTCAGCAGCAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: LSTEQLSSDSVTSSS*SERYLASSFSSNLF
Trigger: GAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCACGAGCTGGACGTGACGCTGTCGGAGGACAGCTGCTCCGTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CCCAAGGCCACATCTGCCTTGCGGGTGAAGGCGTTCAGCTCCTGTTaGAACACACTCAGCCGCACCAGGATGGCGTGGATGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PKATSALRVKAFSSC*NTLSRTRMAWMSLA
Trigger: TGCCAAGCTCATCCACGCCATCCTGGTGCGGCTGAGTGTGTTGCAACAGGAGCTGAACGCCTTCACCCGCAAGGCAGATGTGGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GAAGGGCTCAGGCTGCTCCTTGCCAGAGCTCCCCAAGGCCACATCTaGCTTGCGGGTGAAGGCGTTCAGCTCCTGTTGCAACACACTCAG +
Preference number: 5 (lower is better)
Translates to: EGLRLLLARAPQGHI*LAGEGVQLLLQHTQ
Trigger: CTGAGTGTGTTGCAACAGGAGCTGAACGCCTTCACCCGCAAGGCAGATGTGGCCTTGGGGAGCTCTGGCAAGGAGCAGCCTGAGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CCCAGGCGGAGCCATTTTGCTTGCCCTGGTGCAGGTTCCACAGGCTaGGGTCCTTGGTGCTATCCAGCTTGGACACCGATCGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: PRRSHFACPGAGSTG*GPWCYPAWTPIVSG
Trigger: TCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAATGGCTCCGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp TGCTCCGAGCGGTATTTGGCCAGCTCGTTCAGCAGCAACTTGTTCTaGTCCTCCAGCTCAGCTGAGGAGCGCCTCAGCAGCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: CSERYLASSFSSNLF*SSSSAEERLSSSAS
Trigger: GGAGGCTGAGCTGCTGAGGCGCTCCTCAGCTGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CCGGGCCACTGGCGGACTATAGTAGACTCGGATTCCCGTCTTGTCTaGAGCCGTGTAGCTGCGCTGCATCTGTCTCCCTGCAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PGHWRTIVDSDSRLV*SRVAALHLSPCRFL
Trigger: CAGGAACCTGCAGGGAGACAGATGCAGCGCAGCTACACGGCTCCAGACAAGACGGGAATCCGAGTCTACTATAGTCCGCCAGTGGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp AGGCTGCGGTCCTTGGTGCTATCCAGCTTGGACACCGATCGTCTCTaGAGCTTGGGTGAGCCGTACTTGGGCGAGCAACATGGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RLRSLVLSSLDTDRL*SLGEPYLGEQHGRS
Trigger: TGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp GGATACACCCTCGGGTTGATGGTAGCTGGCTGGCGAAAGGGGCTCTaGTTTCTTGCAGCTTTCCTCGCCTGCTGCAGTAGTGGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: GYTLGLMVAGWRKGL*FLAAFLACCSSGAR
Trigger: CCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCATCGCCGATCTGCAGCTaGGCGGCTGCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPASPICS*AAASSS
Trigger: GGAGGAGCTGGCAGCCGCCAAGCTGCAGATCGGCGA...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCACTGGGGCCCTCGCTGTaGTCAGGCGCCTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPALGPSL*SGASCS
Trigger: ACTGCACGAGGCGCCTGACAACAGCGAGGGCCCCAG...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGAGGCTCAGGCTGCTCCTaGCCAGAGCTCCCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRGSGCS*PELPKA
Trigger: GGCCTTGGGGAGCTCTGGCAAGGAGCAGCCTGAGCC...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GACCTGGAGCTTGCAACACCTGTTGGGGGCCACAGGAGCCAGGTGCTGAGACAGAGGGGCTCTGGTTTCTaGCAGCTTTCCTCGCCTGCT +
Preference number: 5 (lower is better)
Translates to: DLELATPVGGHRSQVLRQRGSGF*QLSSPA
Trigger: AGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCT...CTGTCTCAGCACCTGGCTCCTGTGGCCCCCAACAGGTGTTGCAAGCTCCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp TCGCAAGTCAGCACACTCATTGTCCAGGCACAGGCGGAGGCCGACTaGGAAGCCATTGGCATCAGCCACCAGGACGTCGATGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: SQVSTLIVQAQAEAD*EAIGISHQDVDGLA
Trigger: AGCAAGGCCATCGACGTCCTGGTGGCTGATGCCAATGGCTTCTCAGTCGGCCTCCGCCTGTGCCTGGACAATGAGTGTGCTGACTTGCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp GTAGTGGGGCTCGGTGCCCGGCCACACACGTTCCGGAAGAACTCCTaGACAATGCCATACTTGGGAGGCTCAGGTTTGGTTCGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: VVGLGARPHTFRKNS*TMPYLGGSGLVRAS
Trigger: TGAGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGAACGTGTGTGGCCGGGCACCGAGCCCCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TCCCGTCTTGTCTGGAGCCGTGTAGCTGCGCTGCATCTGTCTCCCTaGAGGTTCCTGACAGGCCAAGCTACCAATGTGGCTACAGTCCCG +
Preference number: 5 (lower is better)
Translates to: SRLVWSRVAALHLSP*RFLTGQATNVATVP
Trigger: CGGGACTGTAGCCACATTGGTAGCTTGGCCTGTCAGGAACCTGCAGGGAGACAGATGCAGCGCAGCTACACGGCTCCAGACAAGACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GGCTCGGTGCCCGGCCACACACGTTCCGGAAGAACTCCTGAACAATaGCATACTTGGGAGGCTCAGGTTTGGTTCGGGCCTCAGACATGC +
Preference number: 5 (lower is better)
Translates to: GSVPGHTRSGRTPEQ*HTWEAQVWFGPQTC
Trigger: GCATGTCTGAGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGAACGTGTGTGGCCGGGCACCGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp TGTCCTCCGACAGCGTCACGTCCAGCTCGTGCTCCGAGCGGTATTTaGCCAGCTCGTTCAGCAGCAACTTGTTCTGGTCCTCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: CPPTASRPARAPSGI*PARSAATCSGPPAQ
Trigger: CTGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCACGAGCTGGACGTGACGCTGTCGGAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CAGGTTCCTGACAGGCCAAGCTACCAATGTGGCTACAGTCCCGGGTaGAAAGCCCCGCCTTCTCCTTGGCGTCTTTCTCAGGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: QVPDRPSYQCGYSPG*KAPPSPWRLSQAPL
Trigger: CAGTGGAGCCTGAGAAAGACGCCAAGGAGAAGGCGGGGCTTTCCACCCGGGACTGTAGCCACATTGGTAGCTTGGCCTGTCAGGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp GGTCCTTGGTGCTATCCAGCTTGGACACCGATCGTCTCTGGAGCTTaGGTGAGCCGTACTTGGGCGAGCAACATGGCCGCTCAATGCGAG +
Preference number: 5 (lower is better)
Translates to: GPWCYPAWTPIVSGA*VSRTWASNMAAQCE
Trigger: CTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CCTCTTCGCTACCACCTGCCTTGGCCGCCTTCTTGTTCAGGATCCTaGATACACCCTCGGGTTGATGGTAGCTGGCTGGCGAAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: PLRYHLPWPPSCSGS*IHPRVDGSWLAKGA
Trigger: AGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATCCTGAACAAGAAGGCGGCCAAGGCAGGTGGTAGCGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAGGCGTTCAGCTCCTGTaGCAACACACTCAGCCGCAC +
Preference number: 5 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRGVQLL*QHTQPH
Trigger: GTGCGGCTGAGTGTGTTGCAACAGGAGCTGAACGCC...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGACTGGGACAGCTGCTCTaGCAAGCCCCGGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRLGQLL*QAPEAV
Trigger: GACAGCCTCCGGGGCTTGCAAGAGCAGCTGTCCCAG...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp TGCACTTGGAAGGAGAGTGCCGGATGGTGTTGCGGGATGGCCGGATaGAGCAGGAGGCAAGTGACTGGGCGCTACAGTCACATACGGCAT +
Preference number: 5 (lower is better)
Translates to: CTWKESAGWCCGMAG*SRRQVTGRYSHIRH
Trigger: ATGCCGTATGTGACTGTAGCGCCCAGTCACTTGCCTCCTGCTTCATCCGGCCATCCCGCAACACCATCCGGCACTCTCCTTCCAAGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CATTTTGCTTGCCCTGGTGCAGGTTCCACAGGCTGCGGTCCTTGGTaGTATCCAGCTTGGACACCGATCGTCTCTGGAGCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: HFACPGAGSTGCGPW*YPAWTPIVSGAWVS
Trigger: GCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp AGGATGTTCTTCTCTTGGCTCCAGAACTTCTGCTCCAGTCGCCGCTaGAGGCTCAGACTCTGCAGCTCAAACTCCCGTCTCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: RMFFSWLQNFCSSRR*RLRLCSSNSRLSSA
Trigger: GGCGCTGCTGAGACGGGAGTTTGAGCTGCAGAGTCTGAGCCTCCAGCGGCGACTGGAGCAGAAGTTCTGGAGCCAAGAGAAGAACATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp GGTGGAAAGCCCCGCCTTCTCCTTGGCGTCTTTCTCAGGCTCCACTaGCTCAGTACTCACAAAGGCAAAAGCAGGGCCGTTGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: GGKPRLLLGVFLRLH*LSTHKGKSRAVGQL
Trigger: AAGCTGCCCAACGGCCCTGCTTTTGCCTTTGTGAGTACTGAGCCAGTGGAGCCTGAGAAAGACGCCAAGGAGAAGGCGGGGCTTTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp GGTGAGCCGTACTTGGGCGAGCAACATGGCCGCTCAATGCGAGAATaGACCTTGTCCAGGGAGGAAGAGATCTGCTTGCTGCGCACAGAC +
Preference number: 5 (lower is better)
Translates to: GEPYLGEQHGRSMRE*TLSREEEICLLRTD
Trigger: GTCTGTGCGCAGCAAGCAGATCTCTTCCTCCCTGGACAAGGTCCATTCTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CCAGCTTGGACACCGATCGTCTCTGGAGCTTGGGTGAGCCGTACTTaGGCGAGCAACATGGCCGCTCAATGCGAGAATGGACCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: PAWTPIVSGAWVSRT*ASNMAAQCENGPCP
Trigger: TGGACAAGGTCCATTCTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp AGCCATTTTGCTTGCCCTGGTGCAGGTTCCACAGGCTGCGGTCCTTaGTGCTATCCAGCTTGGACACCGATCGTCTCTGGAGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SHFACPGAGSTGCGP*CYPAWTPIVSGAWV
Trigger: CACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CGGATGGTGTTGCGGGATGGCCGGATGAAGCAGGAGGCAAGTGACTaGGCGCTACAGTCACATACGGCATCCTCACTGGGAAGGATCAAG +
Preference number: 5 (lower is better)
Translates to: RMVLRDGRMKQEASD*ALQSHTASSLGRIK
Trigger: CTTGATCCTTCCCAGTGAGGATGCCGTATGTGACTGTAGCGCCCAGTCACTTGCCTCCTGCTTCATCCGGCCATCCCGCAACACCATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp AGACCTGAGCCTGCTACTGAGCTGCCTCAGCCACACGGGGGACTCCATGCTGTCAGCAGAAAGTTGTGCTaGAACTGCTGGGACTCCTGC +
Preference number: 5 (lower is better)
Translates to: RPEPATELPQPHGGLHAVSRKLC*NCWDSC
Trigger: GCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCT...GACAGCATGGAGTCCCCCGTGTGGCTGAGGCAGCTCAGTAGCAGGCTCAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CAGGTGCTGAGACAGTGGAAATGCACAACCCATACAGAGACGATGGTAAGGCTGTCGCTGGGCAGAACCTaGCCCTGCCGCCAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: QVLRQWKCTTHTETMVRLSLGRT*PCRQRF
Trigger: GAAGCGCTGGCGGCAGGGCAAGGTTCTGCCCAGCGA...CAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTGCCTCGGCTGACTCCTaGGGCTTGGCGGTAGTGAAG +
Preference number: 5 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVASADS*GLAVVK
Trigger: CTTCACTACCGCCAAGCCCAAGGAGTCAGCCGAGGC...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCAGTCGAGGGTGCAGCCTGCACTaGGAAGGAGAGTGCCGGATG +
Preference number: 5 (lower is better)
Translates to: YTGVVQATPRGVGRTGSRGCSLH*EGECRM
Trigger: CATCCGGCACTCTCCTTCCAAGTGCAGGCTGCACCC...TCGACTGCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp TACGGAAGGCCTCTCGGATCCTGGGCTCCCACTCAAGCAGGTCTCTaGAGTCAGGTGGCTGGAAGTCAGAGCCAAGGTCTTTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: YGRPLGSWAPTQAGL*SQVAGSQSQGLWTA
Trigger: TGCTGTCCAAAGACCTTGGCTCTGACTTCCAGCCACCTGACTTCAGAGACCTGCTTGAGTGGGAGCCCAGGATCCGAGAGGCCTTCCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 90 bp CTTGGTGCTATCCAGCTTGGACACCGATCGTCTCTGGAGCTTGGGTaGGCCGTACTTGGGCGAGCAACATGGCCGCTCAATGCGAGAATG +
Preference number: 5 (lower is better)
Translates to: LGAIQLGHRSSLELG*AVLGRATWPLNARM
Trigger: CATTCTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TTCAAGGAATGCTCTCTGGGACGATCCAGCTCCGTCTGTAGCACCTaGTTGGCCAGCTCTGTCTCAATGAGCCTCTGTCGAAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: FKECSLGRSSSVCST*LASSVSMSLCRSPS
Trigger: CGAGGGGCTTCGACAGAGGCTCATTGAGACAGAGCTGGCCAAGCAGGTGCTACAGACGGAGCTGGATCGTCCCAGAGAGCATTCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TGGGACTCCTGCACCAGGATGTTCTTCTCTTGGCTCCAGAACTTCTaGTCCAGTCGCCGCTGGAGGCTCAGACTCTGCAGCTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: WDSCTRMFFSWLQNF*SSRRWRLRLCSSNS
Trigger: GGAGTTTGAGCTGCAGAGTCTGAGCCTCCAGCGGCGACTGGAGCAGAAGTTCTGGAGCCAAGAGAAGAACATCCTGGTGCAGGAGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CAATGCCATACTTGGGAGGCTCAGGTTTGGTTCGGGCCTCAGACATaGCCAGTTTCCACACAGACTCGGTGCTCCCAGAGTGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: QCHTWEAQVWFGPQT*PVSTQTRCSQSAPP
Trigger: TGGTGGAGCACTCTGGGAGCACCGAGTCTGTGTGGAAACTGGGCATGTCTGAGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TGGTTTCTTGCAGCTTTCCTCGCCTGCTGCAGTAGTGGGGCTCGGTaGCCGGCCACACACGTTCCGGAAGAACTCCTGAACAATGCCATA +
Preference number: 5 (lower is better)
Translates to: WFLAAFLACCSSGAR*PATHVPEELLNNAI
Trigger: TATGGCATTGTTCAGGAGTTCTTCCGGAACGTGTGTGGCCGGGCACCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGCAAGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CCCGGCCACACACGTTCCGGAAGAACTCCTGAACAATGCCATACTTaGGAGGCTCAGGTTTGGTTCGGGCCTCAGACATGCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: PGHTRSGRTPEQCHT*EAQVWFGPQTCPVS
Trigger: GGAAACTGGGCATGTCTGAGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGAACGTGTGTGGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CTTGTTCAGGATCCTGGATACACCCTCGGGTTGATGGTAGCTGGCTaGCGAAAGGGGCTCTGGTTTCTTGCAGCTTTCCTCGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LVQDPGYTLGLMVAG*RKGLWFLAAFLACC
Trigger: GCAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATCCTGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp ATCAAGGATCCATCTCCATCCCGAAGGATGCCATCCTTCCCCACCTaGGACAGCATGGTGGGTCTGACCTCTTCGCTACCACCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: IKDPSPSRRMPSFPT*DSMVGLTSSLPPAL
Trigger: CAAGGCAGGTGGTAGCGAAGAGGTCAGACCCACCATGCTGTCCCAGGTGGGGAAGGATGGCATCCTTCGGGATGGAGATGGATCCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTTCACAGCGCTGCAGATaGGAGAGGAGCACGCGGTTC +
Preference number: 5 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVSQRCR*ERSTRF
Trigger: GAACCGCGTGCTCCTCTCCAATCTGCAGCGCTGTGA...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGAAGGTGGCCTTGGCCTTaGCGAACTGCTGCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRRWPWP*RTAAEV
Trigger: AACTTCAGCAGCAGTTCGCAAAGGCCAAGGCCACCT...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGCCTGCCGCACGCAGTaGGTGATCTCCTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPAACRTQ*VISFMS
Trigger: CGACATGAAGGAGATCACCAACTGCGTGCGGCAGGC...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTCCAGGCGGAGCCATTTaGCTTGCCCTGGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPPGGAI*LALVQV
Trigger: AACCTGCACCAGGGCAAGCAAAATGGCTCCGCCTGG...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GACTATAGTAGACTCGGATTCCCGTCTTGTCTGGAGCCGTGTAGCTaGGCTGCATCTGTCTCCCTGCAGGTTCCTGACAGGCCAAGCTAC +
Preference number: 5 (lower is better)
Translates to: DYSRLGFPSCLEPCS*AASVSLQVPDRPSY
Trigger: GTAGCTTGGCCTGTCAGGAACCTGCAGGGAGACAGATGCAGCGCAGCTACACGGCTCCAGACAAGACGGGAATCCGAGTCTACTATAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CCTTCTTGTTCAGGATCCTGGATACACCCTCGGGTTGATGGTAGCTaGCTGGCGAAAGGGGCTCTGGTTTCTTGCAGCTTTCCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: PSCSGSWIHPRVDGS*LAKGALVSCSFPRL
Trigger: CAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATCCTGAACAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp ATGGGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAAGGATGCGACAGGTTTaGCTGGCTTGGTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MGRMVEDVWGVMTSFGPARMRQV*LAWSSC
Trigger: GCAGCTGGACCAAGCCAGCAAAACCTGTCGCATCCT...TGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GTAGGCACAGACAGGGGTCTCCAGAGCTCCAGGATTCCAAGTGTACTTAGCCCTAAGTCAGCACACTCATaGTCCAGGCACAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: VGTDRGLQSSRIPSVLSPKSAHS*SRHRRR
Trigger: CCTCCGCCTGTGCCTGGACAATGAGTGTGCTGACTT...AGGGCTAAGTACACTTGGAATCCTGGAGCTCTGGAGACCCCTGTCTGTGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TGTCCCCATTCCCTGCTCCAGGCAGGTCTAACAACCAGAGCAGCAGGGCTGAGATGGACCATTTTCTGGTaGAAGCTGTCAGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CPHSLLQAGLTTRAAGLRWTIFW*KLSASS
Trigger: GGAGGAGGCTGACAGCTTCAACCAGAAAATGGTCCA...TCTCAGCCCTGCTGCTCTGGTTGTTAGACCTGCCTGGAGCAGGGAATGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GAGGAGCCACGAGTGGCTATAAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAAGGATCTTGCCCTCCTaGTCATGGACCACAGGGACA +
Preference number: 5 (lower is better)
Translates to: EEPRVAIRLREALVNRLARILPS*SWTTGT
Trigger: TGTCCCTGTGGTCCATGACAAGGAGGGCAAGATCCT...TGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTTATAGCCACTCGTGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp AGGTGGGAGTGTAGAGGCATCTCCCTAGTTCTGGAGCAAACCAGCTATGCAGCTCACAGGCTGCGGTCCTaGGTGCTATCCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: RWECRGISLVLEQTSYAAHRLRS*VLSSLD
Trigger: GTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTG...AGCTGCATAGCTGGTTTGCTCCAGAACTAGGGAGATGCCTCTACACTCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TTGAGTTATACTGGTGTGGTTCAGGCGACTCCTAGGGGTGTAGGAAGGACAGGCGGATACACCCTCGGGTaGATGGTAGCTGGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: LSYTGVVQATPRGVGRTGGYTLG*MVAGWR
Trigger: TCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCC...GCCTGTCCTTCCTACACCCCTAGGAGTCGCCTGAACCACACCAGTATAACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TTGTCATGGGTCTTCTCACTTCGTGCCTCTTTCCAGCTGTTGTCTTaGTTCTCCATGTCTGAGTGCTTCAGGACCCAGGGCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSWVFSLRASFQLLS*FSMSECFRTQGSAA
Trigger: GGCTGCCGAGCCCTGGGTCCTGAAGCACTCAGACATGGAGAAGCAAGACAACAGCTGGAAAGAGGCACGAAGTGAGAAGACCCATGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GATGTGTTCTTTACCTTCCTCTCCAGAGAGCCGGAGCGCATGGCCTaGCGCACGCAGTTGGTGATCTCCTTCATGTCGTCACTCATGTTG +
Preference number: 5 (lower is better)
Translates to: DVFFTFLSREPERMA*RTQLVISFMSSLML
Trigger: CAACATGAGTGACGACATGAAGGAGATCACCAACTGCGTGCGGCAGGCCATGCGCTCCGGCTCTCTGGAGAGGAAGGTAAAGAACACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp TCCGGAAGAACTCCTGAACAATGCCATACTTGGGAGGCTCAGGTTTaGTTCGGGCCTCAGACATGCCCAGTTTCCACACAGACTCGGTGC +
Preference number: 5 (lower is better)
Translates to: SGRTPEQCHTWEAQV*FGPQTCPVSTQTRC
Trigger: GCACCGAGTCTGTGTGGAAACTGGGCATGTCTGAGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp AGGAGGCAAGTGACTGGGCGCTACAGTCACATACGGCATCCTCACTaGGAAGGATCAAGGATCCATCTCCATCCCGAAGGATGCCATCCT +
Preference number: 5 (lower is better)
Translates to: RRQVTGRYSHIRHPH*EGSRIHLHPEGCHP
Trigger: AGGATGGCATCCTTCGGGATGGAGATGGATCCTTGATCCTTCCCAGTGAGGATGCCGTATGTGACTGTAGCGCCCAGTCACTTGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGAAGGATGGTGGAGGATGTCTGGGGAGTGATGACATCATTCGGGCCTGCAGTTGTCTGTAGCACCTGCTaGGCCAGCTCTGTCTCAATG +
Preference number: 5 (lower is better)
Translates to: GRMVEDVWGVMTSFGPAVVCSTC*ASSVSM
Trigger: CATTGAGACAGAGCTGGCCAAGCAGGTGCTACAGAC...AACTGCAGGCCCGAATGATGTCATCACTCCCCAGACATCCTCCACCATCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TCTTCAGGTGCTTTTGAGGCCCAGTCCTGGTCACCCAGGTTTGGTCGTTCTCCTAACTTGGTGAGCTTCTaGCACATGAGGGCCGACTCC +
Preference number: 5 (lower is better)
Translates to: SSGAFEAQSWSPRFGRSPNLVSF*HMRADS
Trigger: GGAGTCGGCCCTCATGTGCAAGAAGCTCACCAAGTT...AGGAGAACGACCAAACCTGGGTGACCAGGACTGGGCCTCAAAAGCACCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTCCGACTGAGAAGCCATaGGCATCAGCCACCAGGACG +
Preference number: 5 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCPTEKP*ASATRT
Trigger: CGTCCTGGTGGCTGATGCCAATGGCTTCTCAGTCGG...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCCTCTGCCAGGAGGTGTaGCTGCTCCTCCCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: GKCSALRLNGTGGTRCRALCQEV*LLLPLS
Trigger: AGAGAGCGGGAGGAGCAGCAACACCTCCTGGCAGAG...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTAAGCCCCGCCTTCTCCTaGGCGTCTTTCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLSPAFS*ASFSGS
Trigger: GGAGCCTGAGAAAGACGCCAAGGAGAAGGCGGGGCT...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CTGCGAGTTCTTACTTCGGGAATGTGGAAGGAACAGAGCCGCAGTCATCTGTGTGCGGAGCCATTTTGCTaGCCCTGGTGCAGGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LRVLTSGMWKEQSRSHLCAEPFC*PWCRFH
Trigger: GTGGAACCTGCACCAGGGCAAGCAAAATGGCTCCGC...ACACAGATGACTGCGGCTCTGTTCCTTCCACATTCCCGAAGTAAGAACTCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp AAGCCAGTTCCCCCGAGCTCAGCTTCAGAGACACCCTCCTTGTCATaGGTCTTCTCACTTCGTGCCTCTTTCCAGCTGTTGTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KPVPPSSASETPSLS*VFSLRASFQLLSCF
Trigger: GAAGCAAGACAACAGCTGGAAAGAGGCACGAAGTGAGAAGACCCATGACAAGGAGGGTGTCTCTGAAGCTGAGCTCGGGGGAACTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GAGGAGCCACGAGTGGCTATAAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAATGTCCTTAGAGACCTaGACGTCCTGTTCCAGACCT +
Preference number: 5 (lower is better)
Translates to: EEPRVAIRLREALVNRLAMSLET*TSCSRP
Trigger: AGGTCTGGAACAGGACGTCAAGGTCTCTAAGGACAT...TGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTTATAGCCACTCGTGGCTCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGGACAGTGACAAGTGGCCTTGCACAGTGGCAAGCAAGAATTAGAAACGGTGACGCTGACTCCTTGGGCTaGGCGGTAGTGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GTVTSGLAQWQARIRNGDADSLG*AVVKRK
Trigger: CTTCCTCTTCACTACCGCCAAGCCCAAGGAGTCAGC...GTCACCGTTTCTAATTCTTGCTTGCCACTGTGCAAGGCCACTTGTCACTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp CGCTTCAGGAACCACCGGAGCTTCATGAAGAGCAGCAGAAAGTTGTaGTTGAACTGCTGGGACTCCTGCACCAGGATGTTCTTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: RFRNHRSFMKSSRKL*LNCWDSCTRMFFSW
Trigger: CCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAAGCTCCGGTGGTTCCTGAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp GCCTCAGACATGCCCAGTTTCCACACAGACTCGGTGCTCCCAGAGTaGTCCACCACACTAAAGAGGCTAGAAAGCCCATCATTGATGTTC +
Preference number: 5 (lower is better)
Translates to: ASDMPSFHTDSVLPE*STTLKRLESPSLMF
Trigger: GAACATCAATGATGGGCTTTCTAGCCTCTTTAGTGTGGTGGAGCACTCTGGGAGCACCGAGTCTGTGTGGAAACTGGGCATGTCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCACAGGTTTTGCTGGCTaGGTCCAGCTGCTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: GKCSALRLNGTGGTRCRATGFAG*VQLLPQ
Trigger: TTGCGGCAGCAGCTGGACCAAGCCAGCAAAACCTGT...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGAAAGAGCAGCAGAAAGTaGTGCTTGAACTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRKSSRK*CLNCWD
Trigger: GTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTT...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp TTGTGGCCTGGTGTGGTCCCCTCAGCTAGAAATAACCTTAGAGGGGCCTCTGACGCCTCTTTCCAGCTGTaGTCTTGCTTCTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: LWPGVVPSARNNLRGASDASFQL*SCFSMS
Trigger: AGACATGGAGAAGCAAGACAACAGCTGGAAAGAGGC...GTCAGAGGCCCCTCTAAGGTTATTTCTAGCTGAGGGGACCACACCAGGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CAGGTGCTGAGACAGTGGAAATGCACAACCCATACAGAGACGATGGTAAGGCTGGAGGAAGAGATCTGCTaGCTGCGCACAGACACAAGC +
Preference number: 5 (lower is better)
Translates to: QVLRQWKCTTHTETMVRLEEEIC*LRTDTS
Trigger: GCTTGTGTCTGTGCGCAGCAAGCAGATCTCTTCCTC...CAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp AACCACCGGAGCTTCATGAAGAGCAGCAGAAAGTTGTGCTTGAACTaGTGGGACTCCTGCACCAGGATGTTCTTCTCTTGGCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: NHRSFMKSSRKLCLN*WDSCTRMFFSWLQN
Trigger: GTTCTGGAGCCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAAGCTCCGGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp AGCTTCTTGCACATGAGGGCCGACTCCTCCTTTGCAAAATGCAGCTaGCACTTCAGGTCTGCACTATCCTCCTGTGCAGTAGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: SFLHMRADSSFAKCS*HFRSALSSCAVGFL
Trigger: TAAGAAGCCTACTGCACAGGAGGATAGTGCAGACCTGAAGTGCCAGCTGCATTTTGCAAAGGAGGAGTCGGCCCTCATGTGCAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CACCGGAGCTTCATGAAGAGCAGCAGAAAGTTGTGCTTGAACTGCTaGGACTCCTGCACCAGGATGTTCTTCTCTTGGCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: HRSFMKSSRKLCLNC*DSCTRMFFSWLQNF
Trigger: GAAGTTCTGGAGCCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAAGCTCCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp CAGCAAGGTACGGGGAGCAGTCGAGCAAACTTTCAAACTCAGACATaGAGGAGACTGATTTGGTCCTCTTTAAGCCAGTTCCCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: QQGTGSSRANFQTQT*RRLIWSSLSQFPRA
Trigger: AGCTCGGGGGAACTGGCTTAAAGAGGACCAAATCAGTCTCCTCCATGTCTGAGTTTGAAAGTTTGCTCGACTGCTCCCCGTACCTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CAGGTGCTGAGACAGTGGAAATGCACAACCCATACAGAGACGATGGTAAGGCTGTCGTTCAGCAGCAACTaGTTCTGGTCCTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: QVLRQWKCTTHTETMVRLSFSSN*FWSSSS
Trigger: TGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGA...CAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTGTCTCAGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp AAGGCTAAGAGAAGCGCTGGTGAACAGGCTGGCAGGCTGGTAGACACTCTCAGATCAGAGCCAAGGTCTTaGGACAGCATGATCTCCTTA +
Preference number: 5 (lower is better)
Translates to: KAKRSAGEQAGRLVDTLRSEPRS*DSMISL
Trigger: TAAGGAGATCATGCTGTCCAAAGACCTTGGCTCTGA...TCTGAGAGTGTCTACCAGCCTGCCAGCCTGTTCACCAGCGCTTCTCTTAGCCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTAATGTCGGCCAGGGTCTaGATGCACTCATTAGGCGTG +
Preference number: 5 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLMSARV*MHSLGV
Trigger: CACGCCTAATGAGTGCATCAAGACCCTGGCCGACAT...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTATTGGTGCTATCCAGCTaGGACACCGATCGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLLVLSS*DTDRLW
Trigger: CCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAA...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCGCCTTGGCCGCCTTCTaGTTCAGGATCCTGGATACA +
Preference number: 5 (lower is better)
Translates to: GKCSALRLNGTGGTRCRAALAAF*FRILDT
Trigger: TGTATCCAGGATCCTGAACAAGAAGGCGGCCAAGGC...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 90 bp TTCATGAAGAGCAGCAGAAAGTTGTGCTTGAACTGCTGGGACTCCTaGACCAGGATGTTCTTCTCTTGGCTCCAGAACTTCTGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FMKSSRKLCLNCWDS*TRMFFSWLQNFCSS
Trigger: ACTGGAGCAGAAGTTCTGGAGCCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 90 bp AGCAGTCGAGCAAACTTTCAAACTCAGACATGGAGGAGACTGATTTaGTCCTCTTTAAGCCAGTTCCCCCGAGCTCAGCTTCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: SSRANFQTQTWRRLI*SSLSQFPRAQLQRH
Trigger: GTGTCTCTGAAGCTGAGCTCGGGGGAACTGGCTTAAAGAGGACCAAATCAGTCTCCTCCATGTCTGAGTTTGAAAGTTTGCTCGACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCTTCTCCTTAGCCAACTaGGTGAGCTTCTTGCACATG +
Preference number: 5 (lower is better)
Translates to: GKCSALRLNGTGGTRCRAFSLAN*VSFLHM
Trigger: CATGTGCAAGAAGCTCACCAAGTTGGCTAAGGAGAA...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp GGGAAATGTAGTGCTCTGAGACTAAATGGTACTGGAGGAACAAGGTGCAGAGCCATGTCGTCACTCATGTaGCCCGACATCTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: GKCSALRLNGTGGTRCRAMSSLM*PDISKS
Trigger: TGACTTTGAGATGTCGGGCAACATGAGTGACGACAT...GGCTCTGCACCTTGTTCCTCCAGTACCATTTAGTCTCAGAGCACTACATTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS-3UTR CAA 90 bp CTGGAAATCAGAGGTCACTGCCCAGCAGTCAGCAAGACACCTTGCTTTACCTTACTAGAAAGCCCATCATaGATGTTCCTCAGTACAGGG +
Preference number: 5 (lower is better)
Translates to: LEIRGHCPAVSKTPCFTLLESPS*MFLSTG
Trigger: CCCTGTACTGAGGAACATCAATGATGGGCTTTCTAG...TAAGGTAAAGCAAGGTGTCTTGCTGACTGCTGGGCAGTGACCTCTGATTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp GCCTCGGCTTCACGGGCCCTGCACAGCCGGGCGGCGTaGGGCTCCAGCGTCTCACCCAGAGGGGCAGGCACG +
Preference number: 6 (lower is better)
Translates to: ASASRALHSRAA*GSSVSPRGAGT
Trigger: CGTGCCTGCCCCTCTGGGTGAGACGCTGGAGCCCCACGCCGCCCGGCTGTGCAGGGCCCGTGAAGCCGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp GCTGTAGCGGAGCCCGGGCCTGTGCCGCGGCGGCCTTaGGCCAGAGACCAGCCGGCCACGTCCTTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: AVAEPGPVPRRP*ARDQPATSLGR
Trigger: CCGGCCCAAGGACGTGGCCGGCTGGTCTCTGGCCAAAGGCCGCCGCGGCACAGGCCCGGGCTCCGCTACAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp GGCGCTGAGTGGCAAGCGGCTGCTGCCCACCGACGATaGGGCCACCGACGGCTCATCCGGGGAGGCGGGAGG +
Preference number: 6 (lower is better)
Translates to: GAEWQAAAAHRR*GHRRLIRGGGR
Trigger: CCTCCCGCCTCCCCGGATGAGCCGTCGGTGGCCGCATCGTCGGTGGGCAGCAGCCGCTTGCCACTCAGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp GCCACGTCCTTGGGCCGGGCTGGTGATGGCGCGCGGTaGCTTTTCTTCCTCTCCGCGGCGGGCGCGGGCGCA +
Preference number: 6 (lower is better)
Translates to: ATSLGRAGDGAR*LFFLSAAGAGA
Trigger: TGCGCCCGCGCCCGCCGCGGAGAGGAAGAAAAGCCACCGCGCGCCATCACCAGCCCGGCCCAAGGACGTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CGAGGCCCCGTGCCTCGGGTACCAGGAGCCACCGCGCGCCCCTTCTaGTCGGGCCTCGCCGAGGACGCGGTGCCACAGGCTGTAGCGGAG +
Preference number: 6 (lower is better)
Translates to: RGPVPRVPGATARPF*SGLAEDAVPQAVAE
Trigger: CTCCGCTACAGCCTGTGGCACCGCGTCCTCGGCGAGGCCCGACAAGAAGGGGCGCGCGGTGGCTCCTGGTACCCGAGGCACGGGGCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp GTGCCTCGGGTACCAGGAGCCACCGCGCGCCCCTTCTaGTCGGGCCTCGCCGAGGACGCGGTGCCACAGGCT +
Preference number: 6 (lower is better)
Translates to: VPRVPGATARPF*SGLAEDAVPQA
Trigger: AGCCTGTGGCACCGCGTCCTCGGCGAGGCCCGACAAGAAGGGGCGCGCGGTGGCTCCTGGTACCCGAGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GTGCCACAGGCTGTAGCGGAGCCCGGGCCTGTGCCGCGGCGGCCTTaGGCCAGAGACCAGCCGGCCACGTCCTTGGGCCGGGCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: VPQAVAEPGPVPRRP*ARDQPATSLGRAGD
Trigger: ATCACCAGCCCGGCCCAAGGACGTGGCCGGCTGGTCTCTGGCCAAAGGCCGCCGCGGCACAGGCCCGGGCTCCGCTACAGCCTGTGGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CCTGTGCCGCGGCGGCCTTTGGCCAGAGACCAGCCGGCCACGTCCTaGGGCCGGGCTGGTGATGGCGCGCGGTGGCTTTTCTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: PVPRRPLARDQPATS*GRAGDGARWLFFLS
Trigger: GGAGAGGAAGAAAAGCCACCGCGCGCCATCACCAGCCCGGCCCAAGGACGTGGCCGGCTGGTCTCTGGCCAAAGGCCGCCGCGGCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp CAGAGACCAGCCGGCCACGTCCTTGGGCCGGGCTGGTaGTGGCGCGCGGTGGCTTTTCTTCCTCTCCGCGGC +
Preference number: 6 (lower is better)
Translates to: QRPAGHVLGPGW*WRAVAFLPLRG
Trigger: GCCGCGGAGAGGAAGAAAAGCCACCGCGCGCCATCACCAGCCCGGCCCAAGGACGTGGCCGGCTGGTCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp GCCTCCTCCTTCCGGAGCTGCCGCTCCTGGGACAGCTaGTCTTGCAAGCCCCGGAGGCTGTCGTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: ASSFRSCRSWDS*SCKPRRLSWAS
Trigger: CGAGGCCCACGACAGCCTCCGGGGCTTGCAAGAGCAGCTGTCCCAGGAGCGGCAGCTCCGGAAGGAGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CCCCAGCCTCAGCGTCCGTCTCCAGCATGGGGCGTGTaGTCTGGCAGGAGGCCAGGTCACAGCGCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: PQPQRPSPAWGV*SGRRPGHSAAD
Trigger: ATCTGCAGCGCTGTGACCTGGCCTCCTGCCAGAGCACACGCCCCATGCTGGAGACGGACGCTGAGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CCGACTGAGAAGCCATTGGCATCAGCCACCAGGACGTCGATGGCCTaGCTGACCAAAGCGGCCTGCTCCCGTAGGCCGGGCAGCGCCTCG +
Preference number: 6 (lower is better)
Translates to: PTEKPLASATRTSMA*LTKAACSRRPGSAS
Trigger: CGAGGCGCTGCCCGGCCTACGGGAGCAGGCCGCTTTGGTCAGCAAGGCCATCGACGTCCTGGTGGCTGATGCCAATGGCTTCTCAGTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp TGGGAGCCCAAGGCAGGCAGAGCAGGGAAGGGCTCAGGCTGCTCCTaGCCAGAGCTCCCCAAGGCCACATCTGCCTTGCGGGTGAAGGCG +
Preference number: 6 (lower is better)
Translates to: WEPKAGRAGKGSGCS*PELPKATSALRVKA
Trigger: CGCCTTCACCCGCAAGGCAGATGTGGCCTTGGGGAGCTCTGGCAAGGAGCAGCCTGAGCCCTTCCCTGCTCTGCCTGCCTTGGGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp CATTGGCATCAGCCACCAGGACGTCGATGGCCTTGCTaGCCAAAGCGGCCTGCTCCCGTAGGCCGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: HWHQPPGRRWPC*PKRPAPVGRAA
Trigger: CGCTGCCCGGCCTACGGGAGCAGGCCGCTTTGGTCAGCAAGGCCATCGACGTCCTGGTGGCTGATGCCAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp GGCTGCTGCGGGGTGGGTCGGTCTGAAGACCTACACTaGCCGTCCGAATGGTCTGGGTGCCCACGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: GCCGVGRSEDLH*PSEWSGCPRWP
Trigger: TGGCCACCGTGGGCACCCAGACCATTCGGACGGTCAGTGTAGGTCTTCAGACCGACCCACCCCGCAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CCCCGGATCCTCCATCCAGCCGCTGCCGGGAGAAATTaGAAAGCCACCGGCTGTAGGAGCTCTCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PRILHPAAAGRN*KATGCRSSRPA
Trigger: GGCTGGCCGAGAGCTCCTACAGCCGGTGGCTTTGCAATTTCTCCCGGCAGCGGCTGGATGGAGGATCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp GCCTCAGCGTCCGTCTCCAGCATGGGGCGTGTGCTCTaGCAGGAGGCCAGGTCACAGCGCTGCAGATTGGAG +
Preference number: 6 (lower is better)
Translates to: ASASVSSMGRVL*QEARSQRCRLE
Trigger: CTCCAATCTGCAGCGCTGTGACCTGGCCTCCTGCCAGAGCACACGCCCCATGCTGGAGACGGACGCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp GGCGCTCGCTCAGCTGCAGCTGCCTCGTCAGCTCCATaGCGGCGCTGTAGGACTCTGCCAGGAGGTGTTGCT +
Preference number: 6 (lower is better)
Translates to: GARSAAAASSAP*RRCRTLPGGVA
Trigger: AGCAACACCTCCTGGCAGAGTCCTACAGCGCCGTCATGGAGCTGACGAGGCAGCTGCAGCTGAGCGAGCGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp GCTGTAGGAGCTCTCGGCCAGCCCGTCAGCCTCGGCTaGCTCCTTGGGCTTGGCGGTAGTGAAGAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: AVGALGQPVSLG*LLGLGGSEEEA
Trigger: GGCTTCCTCTTCACTACCGCCAAGCCCAAGGAGTCAGCCGAGGCTGACGGGCTGGCCGAGAGCTCCTACAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp AGTCTCACGGGAGTGCGGAGCATCCGCCAGCTCCTCTaGCGACAGGGCTGCATCCAGGTCCCCATAGAGCGA +
Preference number: 6 (lower is better)
Translates to: SLTGVRSIRQLL*RQGCIQVPIER
Trigger: TCGCTCTATGGGGACCTGGATGCAGCCCTGTCGGCAGAGGAGCTGGCGGATGCTCCGCACTCCCGTGAGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CAGACACAAGCGAGGAGCTGCGGGGTGACCAGCTCTTaGTGTGGAGGCTGCTGCGGGGTGGGTCGGTCTGAA +
Preference number: 6 (lower is better)
Translates to: QTQARSCGVTSS*CGGCCGVGRSE
Trigger: TTCAGACCGACCCACCCCGCAGCAGCCTCCACAGCAAGAGCTGGTCACCCCGCAGCTCCTCGCTTGTGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp CTCAGCAGCTCAGCCTCCTCTTCCACGAACTGCAGGTaGCGCCGCAACTCGGCTAGGCTCTCCCCGCACTCA +
Preference number: 6 (lower is better)
Translates to: LSSSASSSTNCR*RRNSARLSPHS
Trigger: TGAGTGCGGGGAGAGCCTAGCCGAGTTGCGGCGCCACCTGCAGTTCGTGGAAGAGGAGGCTGAGCTGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp AAGCCATTGGCATCAGCCACCAGGACGTCGATGGCCTaGCTGACCAAAGCGGCCTGCTCCCGTAGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: KPLASATRTSMA*LTKAACSRRPG
Trigger: GCCCGGCCTACGGGAGCAGGCCGCTTTGGTCAGCAAGGCCATCGACGTCCTGGTGGCTGATGCCAATGGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp GTGGTGGTGGAGCGAGCCCAGGCGGAGCCATTTTGCTaGCCCTGGTGCAGGTTCCACAGGCTGCGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: VVVERAQAEPFC*PWCRFHRLRSL
Trigger: CAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAATGGCTCCGCCTGGGCTCGCTCCACCACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp CCGCCCCAGCCTGACTCTGAAGGGTGCAGCCTGCACTaGGAAGGAGAGTGCCGGATGGTGTTGCGGGATGGC +
Preference number: 6 (lower is better)
Translates to: PPQPDSEGCSLH*EGECRMVLRDG
Trigger: GCCATCCCGCAACACCATCCGGCACTCTCCTTCCAAGTGCAGGCTGCACCCTTCAGAGTCAGGCTGGGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CTCTCCTCCCCGCCCCAGCCTGACTCTGAAGGGTGCAGCCTGCACTaGGAAGGAGAGTGCCGGATGGTGTTGCGGGATGGCCGGATGAAG +
Preference number: 6 (lower is better)
Translates to: LSSPPQPDSEGCSLH*EGECRMVLRDGRMK
Trigger: CTTCATCCGGCCATCCCGCAACACCATCCGGCACTCTCCTTCCAAGTGCAGGCTGCACCCTTCAGAGTCAGGCTGGGGCGGGGAGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CGGAGGCTGCGGCGCTCAGCCTTACGCAGTCGGTACTaGAGGATGCGACAGGTTTTGCTGGCTTGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RRLRRSALRSRY*RMRQVLLAWSS
Trigger: GCTGGACCAAGCCAGCAAAACCTGTCGCATCCTGCAGTACCGACTGCGTAAGGCTGAGCGCCGCAGCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp GAGCAGCTGTCCTCCGACAGCGTCACGTCCAGCTCGTaGTCCGAGCGGTATTTGGCCAGCTCGTTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: EQLSSDSVTSSS*SERYLASSFSS
Trigger: GCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCACGAGCTGGACGTGACGCTGTCGGAGGACAGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp GCATCCCTGGGGCCCTCGCTGTTGTCAGGCGCCTCGTaGAGTCGCAAGTCAGCACACTCATTGTCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: ASLGPSLLSGAS*SRKSAHSLSRH
Trigger: GTGCCTGGACAATGAGTGTGCTGACTTGCGACTGCACGAGGCGCCTGACAACAGCGAGGGCCCCAGGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp TTCTGGTTGAAGCTGTCAGCCTCCTCCTTCCGGAGCTaGCGCTCCTGGGACAGCTGCTCTTGCAAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: FWLKLSASSFRS*RSWDSCSCKPR
Trigger: CCGGGGCTTGCAAGAGCAGCTGTCCCAGGAGCGGCAGCTCCGGAAGGAGGAGGCTGACAGCTTCAACCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CCTCCAGGAAGTCATCCTCTTCGCTGGGCAGAACCTTaGCCTGCCGCCAGCGCTTCAGGAACCACCGGAGCT +
Preference number: 6 (lower is better)
Translates to: PPGSHPLRWAEP*PAASASGTTGA
Trigger: AGCTCCGGTGGTTCCTGAAGCGCTGGCGGCAGGGCAAGGTTCTGCCCAGCGAAGAGGATGACTTCCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CTTCAGCTCCATCTGCGAGGCGTGGCCCTTGAGCTCTaGACGCTCTGTCTCCCAGGTGGCCTTGGCCTTTGC +
Preference number: 6 (lower is better)
Translates to: LQLHLRGVALEL*TLCLPGGLGLC
Trigger: GCAAAGGCCAAGGCCACCTGGGAGACAGAGCGTGCAGAGCTCAAGGGCCACGCCTCGCAGATGGAGCTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp GCAGCTTTCCTCGCCTGCTGCAGTAGTGGGGCTCGGTaGCCGGCCACACACGTTCCGGAAGAACTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: AAFLACCSSGAR*PATHVPEELLN
Trigger: GTTCAGGAGTTCTTCCGGAACGTGTGTGGCCGGGCACCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CGAAAGGGGCTCTGGTTTCTTGCAGCTTTCCTCGCCTaGTGCAGTAGTGGGGCTCGGTGCCCGGCCACACAC +
Preference number: 6 (lower is better)
Translates to: RKGLWFLAAFLA*CSSGARCPATH
Trigger: GTGTGTGGCCGGGCACCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp AAGCCTGGCTCAATGAGGATCTTGCCCTCCTTGTCATaGACCACAGGGACACCCAGGCGCCGGGCCACTGGC +
Preference number: 6 (lower is better)
Translates to: KPGSMRILPSLS*TTGTPRRRATG
Trigger: GCCAGTGGCCCGGCGCCTGGGTGTCCCTGTGGTCCATGACAAGGAGGGCAAGATCCTCATTGAGCCAGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp ACCTCCAGGAAGTCATCCTCTTCGCTGGGCAGAACCTaGCCCTGCCGCCAGCGCTTCAGGAACCACCGGAGC +
Preference number: 6 (lower is better)
Translates to: TSRKSSSSLGRT*PCRQRFRNHRS
Trigger: GCTCCGGTGGTTCCTGAAGCGCTGGCGGCAGGGCAAGGTTCTGCCCAGCGAAGAGGATGACTTCCTGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TTCCCAGCCTTCAGCTCCATCTGCGAGGCGTGGCCCTaGAGCTCTGCACGCTCTGTCTCCCAGGTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: FPAFSSICEAWP*SSARSVSQVAL
Trigger: CAAGGCCACCTGGGAGACAGAGCGTGCAGAGCTCAAGGGCCACGCCTCGCAGATGGAGCTGAAGGCTGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TCGGCCAGCCCGTCAGCCTCGGCTGACTCCTTGGGCTaGGCGGTAGTGAAGAGGAAGCCTGGCTCAATGAGG +
Preference number: 6 (lower is better)
Translates to: SASPSASADSLG*AVVKRKPGSMR
Trigger: CCTCATTGAGCCAGGCTTCCTCTTCACTACCGCCAAGCCCAAGGAGTCAGCCGAGGCTGACGGGCTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GGCTCAGGCTGCTCCTTGCCAGAGCTCCCCAAGGCCACATCTGCCTaGCGGGTGAAGGCGTTCAGCTCCTGTTGCAACACACTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: GSGCSLPELPKATSA*RVKAFSSCCNTLSR
Trigger: GCGGCTGAGTGTGTTGCAACAGGAGCTGAACGCCTTCACCCGCAAGGCAGATGTGGCCTTGGGGAGCTCTGGCAAGGAGCAGCCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CCTCGTCAGCTCCATGACGGCGCTGTAGGACTCTGCCAGGAGGTGTaGCTGCTCCTCCCGCTCTCTCTGCAGTGCAGCCTTCCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: PRQLHDGAVGLCQEV*LLLPLSLQCSLPVR
Trigger: CCTGACTGGAAGGCTGCACTGCAGAGAGAGCGGGAGGAGCAGCAACACCTCCTGGCAGAGTCCTACAGCGCCGTCATGGAGCTGACGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GCGGTAGTGAAGAGGAAGCCTGGCTCAATGAGGATCTTGCCCTCCTaGTCATGGACCACAGGGACACCCAGGCGCCGGGCCACTGGCGGA +
Preference number: 6 (lower is better)
Translates to: AVVKRKPGSMRILPS*SWTTGTPRRRATGG
Trigger: TCCGCCAGTGGCCCGGCGCCTGGGTGTCCCTGTGGTCCATGACAAGGAGGGCAAGATCCTCATTGAGCCAGGCTTCCTCTTCACTACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp TTGGGCTTGGCGGTAGTGAAGAGGAAGCCTGGCTCAATGAGGATCTaGCCCTCCTTGTCATGGACCACAGGGACACCCAGGCGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: LGLAVVKRKPGSMRI*PSLSWTTGTPRRRA
Trigger: GGCCCGGCGCCTGGGTGTCCCTGTGGTCCATGACAAGGAGGGCAAGATCCTCATTGAGCCAGGCTTCCTCTTCACTACCGCCAAGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CCCTGGTGCAGGTTCCACAGGCTGCGGTCCTTGGTGCTATCCAGCTaGGACACCGATCGTCTCTGGAGCTTGGGTGAGCCGTACTTGGGC +
Preference number: 6 (lower is better)
Translates to: PWCRFHRLRSLVLSS*DTDRLWSLGEPYLG
Trigger: GCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp GTTGCAACACACTCAGCCGCACCAGGATGGCGTGGATaGGCTTGGCATCCCTGGGGCCCTCGCTGTTGTCAG +
Preference number: 6 (lower is better)
Translates to: VATHSAAPGWRG*AWHPWGPRCCQ
Trigger: CTGACAACAGCGAGGGCCCCAGGGATGCCAAGCTCATCCACGCCATCCTGGTGCGGCTGAGTGTGTTGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp GTCTCCCAGGTGGCCTTGGCCTTTGCGAACTGCTGCTaGAGTTCAGTCAGACCCCGACGCTCGTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: VSQVALAFANCC*SSVRPRRSSWS
Trigger: GCTCCAGGACGAGCGTCGGGGTCTGACTGAACTTCAGCAGCAGTTCGCAAAGGCCAAGGCCACCTGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp CTCTTGCTGTGGAGGCTGCTGCGGGGTGGGTCGGTCTaGAGACCTACACTGACCGTCCGAATGGTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LLLWRLLRGGSV*RPTLTVRMVWV
Trigger: CACCCAGACCATTCGGACGGTCAGTGTAGGTCTTCAGACCGACCCACCCCGCAGCAGCCTCCACAGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp AAGGGGCTCTGGTTTCTTGCAGCTTTCCTCGCCTGCTaGAGTAGTGGGGCTCGGTGCCCGGCCACACACGTT +
Preference number: 6 (lower is better)
Translates to: KGLWFLAAFLAC*SSGARCPATHV
Trigger: AACGTGTGTGGCCGGGCACCGAGCCCCACTACTGCAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TCCTGTTGCAACACACTCAGCCGCACCAGGATGGCGTaGATGAGCTTGGCATCCCTGGGGCCCTCGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SCCNTLSRTRMA*MSLASLGPSLL
Trigger: CAACAGCGAGGGCCCCAGGGATGCCAAGCTCATCCACGCCATCCTGGTGCGGCTGAGTGTGTTGCAACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TCTGGGTGCCCACGGTGGCCACGCCTACCGTCTGGCTaGATGTGTTCTTTACCTTCCTCTCCAGAGAGCCGG +
Preference number: 6 (lower is better)
Translates to: SGCPRWPRLPSG*MCSLPSSPESR
Trigger: CCGGCTCTCTGGAGAGGAAGGTAAAGAACACATCCAGCCAGACGGTAGGCGTGGCCACCGTGGGCACCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TTGTCCAGGCACAGGCGGAGGCCGACTGAGAAGCCATaGGCATCAGCCACCAGGACGTCGATGGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: LSRHRRRPTEKP*ASATRTSMALL
Trigger: CAGCAAGGCCATCGACGTCCTGGTGGCTGATGCCAATGGCTTCTCAGTCGGCCTCCGCCTGTGCCTGGACAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TCAGGCGCCTCGTGCAGTCGCAAGTCAGCACACTCATaGTCCAGGCACAGGCGGAGGCCGACTGAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: SGASCSRKSAHS*SRHRRRPTEKP
Trigger: TGGCTTCTCAGTCGGCCTCCGCCTGTGCCTGGACAATGAGTGTGCTGACTTGCGACTGCACGAGGCGCCTGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GCACACTCATTGTCCAGGCACAGGCGGAGGCCGACTGAGAAGCCATaGGCATCAGCCACCAGGACGTCGATGGCCTTGCTGACCAAAGCG +
Preference number: 6 (lower is better)
Translates to: AHSLSRHRRRPTEKP*ASATRTSMALLTKA
Trigger: CGCTTTGGTCAGCAAGGCCATCGACGTCCTGGTGGCTGATGCCAATGGCTTCTCAGTCGGCCTCCGCCTGTGCCTGGACAATGAGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp TGCCCTGGTGCAGGTTCCACAGGCTGCGGTCCTTGGTaGTATCCAGCTTGGACACCGATCGTCTCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: CPGAGSTGCGPW*YPAWTPIVSGA
Trigger: AGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp GGCTACAGTCCCGGGTGGAAAGCCCCGCCTTCTCCTTaGCGTCTTTCTCAGGCTCCACTGGCTCAGTACTCA +
Preference number: 6 (lower is better)
Translates to: GYSPGWKAPPSP*RLSQAPLAQYS
Trigger: TGAGTACTGAGCCAGTGGAGCCTGAGAAAGACGCCAAGGAGAAGGCGGGGCTTTCCACCCGGGACTGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp GGTTCCACAGGCTGCGGTCCTTGGTGCTATCCAGCTTaGACACCGATCGTCTCTGGAGCTTGGGTGAGCCGT +
Preference number: 6 (lower is better)
Translates to: GSTGCGPWCYPA*TPIVSGAWVSR
Trigger: ACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TGGCTACAGTCCCGGGTGGAAAGCCCCGCCTTCTCCTaGGCGTCTTTCTCAGGCTCCACTGGCTCAGTACTC +
Preference number: 6 (lower is better)
Translates to: WLQSRVESPAFS*ASFSGSTGSVL
Trigger: GAGTACTGAGCCAGTGGAGCCTGAGAAAGACGCCAAGGAGAAGGCGGGGCTTTCCACCCGGGACTGTAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp GTGCTATCCAGCTTGGACACCGATCGTCTCTGGAGCTaGGGTGAGCCGTACTTGGGCGAGCAACATGGCCGC +
Preference number: 6 (lower is better)
Translates to: VLSSLDTDRLWS*GEPYLGEQHGR
Trigger: GCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp AGGTTCCACAGGCTGCGGTCCTTGGTGCTATCCAGCTaGGACACCGATCGTCTCTGGAGCTTGGGTGAGCCG +
Preference number: 6 (lower is better)
Translates to: RFHRLRSLVLSS*DTDRLWSLGEP
Trigger: CGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TGCTTGCCCTGGTGCAGGTTCCACAGGCTGCGGTCCTaGGTGCTATCCAGCTTGGACACCGATCGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: CLPWCRFHRLRS*VLSSLDTDRLW
Trigger: CCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp AGCTCGTGCTCCGAGCGGTATTTGGCCAGCTCGTTCAGCAGCAACTaGTTCTGGTCCTCCAGCTCAGCTGAGGAGCGCCTCAGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SSCSERYLASSFSSN*FWSSSSAEERLSSS
Trigger: TGAGCTGCTGAGGCGCTCCTCAGCTGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCACGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CTGTCCTCCGACAGCGTCACGTCCAGCTCGTGCTCCGAGCGGTATTaGGCCAGCTCGTTCAGCAGCAACTTGTTCTGGTCCTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: LSSDSVTSSSCSERY*ASSFSSNLFWSSSS
Trigger: TGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCACGAGCTGGACGTGACGCTGTCGGAGGACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp TCGCTGTTGTCAGGCGCCTCGTGCAGTCGCAAGTCAGCACACTCATaGTCCAGGCACAGGCGGAGGCCGACTGAGAAGCCATTGGCATCA +
Preference number: 6 (lower is better)
Translates to: SLLSGASCSRKSAHS*SRHRRRPTEKPLAS
Trigger: TGATGCCAATGGCTTCTCAGTCGGCCTCCGCCTGTGCCTGGACAATGAGTGTGCTGACTTGCGACTGCACGAGGCGCCTGACAACAGCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CGGTCCTTGGTGCTATCCAGCTTGGACACCGATCGTCTCTGGAGCTaGGGTGAGCCGTACTTGGGCGAGCAACATGGCCGCTCAATGCGA +
Preference number: 6 (lower is better)
Translates to: RSLVLSSLDTDRLWS*GEPYLGEQHGRSMR
Trigger: TCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp AGCACACTCATTGTCCAGGCACAGGCGGAGGCCGACTaGGAAGCCATTGGCATCAGCCACCAGGACGTCGAT +
Preference number: 6 (lower is better)
Translates to: STLIVQAQAEAD*EAIGISHQDVD
Trigger: ATCGACGTCCTGGTGGCTGATGCCAATGGCTTCTCAGTCGGCCTCCGCCTGTGCCTGGACAATGAGTGTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp ACATCTGCCTTGCGGGTGAAGGCGTTCAGCTCCTGTTaGAACACACTCAGCCGCACCAGGATGGCGTGGATG +
Preference number: 6 (lower is better)
Translates to: TSALRVKAFSSC*NTLSRTRMAWM
Trigger: CATCCACGCCATCCTGGTGCGGCTGAGTGTGTTGCAACAGGAGCTGAACGCCTTCACCCGCAAGGCAGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp AGACTCGGATTCCCGTCTTGTCTGGAGCCGTGTAGCTaGGCTGCATCTGTCTCCCTGCAGGTTCCTGACAGG +
Preference number: 6 (lower is better)
Translates to: RLGFPSCLEPCS*AASVSLQVPDR
Trigger: CCTGTCAGGAACCTGCAGGGAGACAGATGCAGCGCAGCTACACGGCTCCAGACAAGACGGGAATCCGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp CGGTATTTGGCCAGCTCGTTCAGCAGCAACTTGTTCTaGTCCTCCAGCTCAGCTGAGGAGCGCCTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RYLASSFSSNLF*SSSSAEERLSS
Trigger: GCTGCTGAGGCGCTCCTCAGCTGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TCATGCTGTTCACCTCCAGGAAGTCATCCTCTTCGCTaGGCAGAACCTTGCCCTGCCGCCAGCGCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: SCCSPPGSHPLR*AEPCPAASASG
Trigger: TCCTGAAGCGCTGGCGGCAGGGCAAGGTTCTGCCCAGCGAAGAGGATGACTTCCTGGAGGTGAACAGCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp CTGGCTCAGTACTCACAAAGGCAAAAGCAGGGCCGTTaGGCAGCTTCTTGTTCCGGGCATCCCCGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: LAQYSQRQKQGR*AASCSGHPRQQ
Trigger: TTGCTGGCGGGGATGCCCGGAACAAGAAGCTGCCCAACGGCCCTGCTTTTGCCTTTGTGAGTACTGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp GACAGGCCAAGCTACCAATGTGGCTACAGTCCCGGGTaGAAAGCCCCGCCTTCTCCTTGGCGTCTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: DRPSYQCGYSPG*KAPPSPWRLSQ
Trigger: CTGAGAAAGACGCCAAGGAGAAGGCGGGGCTTTCCACCCGGGACTGTAGCCACATTGGTAGCTTGGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TGCTATCCAGCTTGGACACCGATCGTCTCTGGAGCTTaGGTGAGCCGTACTTGGGCGAGCAACATGGCCGCT +
Preference number: 6 (lower is better)
Translates to: CYPAWTPIVSGA*VSRTWASNMAA
Trigger: AGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TACCACCTGCCTTGGCCGCCTTCTTGTTCAGGATCCTaGATACACCCTCGGGTTGATGGTAGCTGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: YHLPWPPSCSGS*IHPRVDGSWLA
Trigger: CGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATCCTGAACAAGAAGGCGGCCAAGGCAGGTGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TTGCGGGATGGCCGGATGAAGCAGGAGGCAAGTGACTaGGCGCTACAGTCACATACGGCATCCTCACTGGGA +
Preference number: 6 (lower is better)
Translates to: LRDGRMKQEASD*ALQSHTASSLG
Trigger: TCCCAGTGAGGATGCCGTATGTGACTGTAGCGCCCAGTCACTTGCCTCCTGCTTCATCCGGCCATCCCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TCCGAGCGGTATTTGGCCAGCTCGTTCAGCAGCAACTaGTTCTGGTCCTCCAGCTCAGCTGAGGAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: SERYLASSFSSN*FWSSSSAEERL
Trigger: GAGGCGCTCCTCAGCTGAGCTGGAGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp GACAGCGTCACGTCCAGCTCGTGCTCCGAGCGGTATTaGGCCAGCTCGTTCAGCAGCAACTTGTTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: DSVTSSSCSERY*ASSFSSNLFWS
Trigger: GGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCACGAGCTGGACGTGACGCTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp GACACCGATCGTCTCTGGAGCTTGGGTGAGCCGTACTaGGGCGAGCAACATGGCCGCTCAATGCGAGAATGG +
Preference number: 6 (lower is better)
Translates to: DTDRLWSLGEPY*GEQHGRSMREW
Trigger: CCATTCTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp ATGCTGTTCACCTCCAGGAAGTCATCCTCTTCGCTGGGCAGAACCTaGCCCTGCCGCCAGCGCTTCAGGAACCACCGGAGCTTCATGAAG +
Preference number: 6 (lower is better)
Translates to: MLFTSRKSSSSLGRT*PCRQRFRNHRSFMK
Trigger: CTTCATGAAGCTCCGGTGGTTCCTGAAGCGCTGGCGGCAGGGCAAGGTTCTGCCCAGCGAAGAGGATGACTTCCTGGAGGTGAACAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp TCCAGCTTGGACACCGATCGTCTCTGGAGCTTGGGTGAGCCGTACTaGGGCGAGCAACATGGCCGCTCAATGCGAGAATGGACCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SSLDTDRLWSLGEPY*GEQHGRSMREWTLS
Trigger: GGACAAGGTCCATTCTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GAGCCATTTTGCTTGCCCTGGTGCAGGTTCCACAGGCTGCGGTCCTaGGTGCTATCCAGCTTGGACACCGATCGTCTCTGGAGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: EPFCLPWCRFHRLRS*VLSSLDTDRLWSLG
Trigger: ACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp AAGGAATGCTCTCTGGGACGATCCAGCTCCGTCTGTAGCACCTGCTaGGCCAGCTCTGTCTCAATGAGCCTCTGTCGAAGCCCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: KECSLGRSSSVCSTC*ASSVSMSLCRSPSF
Trigger: GAACGAGGGGCTTCGACAGAGGCTCATTGAGACAGAGCTGGCCAAGCAGGTGCTACAGACGGAGCTGGATCGTCCCAGAGAGCATTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp AGCAGGTCTCTGAAGTCAGGTGGCTGGAAGTCAGAGCCAAGGTCTTaGGACAGCATGATCTCCTTAGCAGGGCCCTGGGAGCCCAAGGCA +
Preference number: 6 (lower is better)
Translates to: SRSLKSGGWKSEPRS*DSMISLAGPWEPKA
Trigger: TGCCTTGGGCTCCCAGGGCCCTGCTAAGGAGATCATGCTGTCCAAAGACCTTGGCTCTGACTTCCAGCCACCTGACTTCAGAGACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GCCTGCCGCACGCAGTTGGTGATCTCCTTCATGTCGTCACTCATGTaGCCCGACATCTCAAAGTCATGCAAGGCGGGGAAAGCAGGTCCG +
Preference number: 6 (lower is better)
Translates to: ACRTQLVISFMSSLM*PDISKSCKAGKAGP
Trigger: CGGACCTGCTTTCCCCGCCTTGCATGACTTTGAGATGTCGGGCAACATGAGTGACGACATGAAGGAGATCACCAACTGCGTGCGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp TGCCTTGGCCGCCTTCTTGTTCAGGATCCTGGATACACCCTCGGGTaGATGGTAGCTGGCTGGCGAAAGGGGCTCTGGTTTCTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: CLGRLLVQDPGYTLG*MVAGWRKGLWFLAA
Trigger: AGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATCCTGAACAAGAAGGCGGCCAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp CCTCTCGGATCCTGGGCTCCCACTCAAGCAGGTCTCTaGAGTCAGGTGGCTGGAAGTCAGAGCCAAGGTCTT +
Preference number: 6 (lower is better)
Translates to: PLGSWAPTQAGL*SQVAGSQSQGL
Trigger: AAGACCTTGGCTCTGACTTCCAGCCACCTGACTTCAGAGACCTGCTTGAGTGGGAGCCCAGGATCCGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp ATCCAGCTTGGACACCGATCGTCTCTGGAGCTTGGGTaGGCCGTACTTGGGCGAGCAACATGGCCGCTCAAT +
Preference number: 6 (lower is better)
Translates to: IQLGHRSSLELG*AVLGRATWPLN
Trigger: ATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGTCCAAGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp TGCACCAGGATGTTCTTCTCTTGGCTCCAGAACTTCTaGTCCAGTCGCCGCTGGAGGCTCAGACTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CTRMFFSWLQNF*SSRRWRLRLCS
Trigger: GCTGCAGAGTCTGAGCCTCCAGCGGCGACTGGAGCAGAAGTTCTGGAGCCAAGAGAAGAACATCCTGGTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp TTTACCTTCCTCTCCAGAGAGCCGGAGCGCATGGCCTaGCGCACGCAGTTGGTGATCTCCTTCATGTCGTCA +
Preference number: 6 (lower is better)
Translates to: FTFLSREPERMA*RTQLVISFMSS
Trigger: TGACGACATGAAGGAGATCACCAACTGCGTGCGGCAGGCCATGCGCTCCGGCTCTCTGGAGAGGAAGGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp AGCCATTTTGCTTGCCCTGGTGCAGGTTCCACAGGCTaGGGTCCTTGGTGCTATCCAGCTTGGACACCGATC +
Preference number: 6 (lower is better)
Translates to: SHFACPGAGSTG*GPWCYPAWTPI
Trigger: GATCGGTGTCCAAGCTGGATAGCACCAAGGACCGCAGCCTGTGGAACCTGCACCAGGGCAAGCAAAATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp ACTTGGGAGGCTCAGGTTTGGTTCGGGCCTCAGACATaGCCAGTTTCCACACAGACTCGGTGCTCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: TWEAQVWFGPQT*PVSTQTRCSQS
Trigger: ACTCTGGGAGCACCGAGTCTGTGTGGAAACTGGGCATGTCTGAGGCCCGAACCAAACCTGAGCCTCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CCCGGCCACACACGTTCCGGAAGAACTCCTGAACAATaGCATACTTGGGAGGCTCAGGTTTGGTTCGGGCCT +
Preference number: 6 (lower is better)
Translates to: PGHTRSGRTPEQ*HTWEAQVWFGP
Trigger: AGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGAACGTGTGTGGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp ACAGCGTCACGTCCAGCTCGTGCTCCGAGCGGTATTTaGCCAGCTCGTTCAGCAGCAACTTGTTCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: TASRPARAPSGI*PARSAATCSGP
Trigger: AGGACCAGAACAAGTTGCTGCTGAACGAGCTGGCCAAATACCGCTCGGAGCACGAGCTGGACGTGACGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TTCTCTTGGCTCCAGAACTTCTGCTCCAGTCGCCGCTaGAGGCTCAGACTCTGCAGCTCAAACTCCCGTCTC +
Preference number: 6 (lower is better)
Translates to: FSWLQNFCSSRR*RLRLCSSNSRL
Trigger: GAGACGGGAGTTTGAGCTGCAGAGTCTGAGCCTCCAGCGGCGACTGGAGCAGAAGTTCTGGAGCCAAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TCGGCCAGGGTCTTGATGCACTCATTAGGCGTGTTCTaGGTCCAGCTCTCCCCTGTGCAGGCCTTGTTATCC +
Preference number: 6 (lower is better)
Translates to: SARVLMHSLGVF*VQLSPVQALLS
Trigger: GGATAACAAGGCCTGCACAGGGGAGAGCTGGACCCAGAACACGCCTAATGAGTGCATCAAGACCCTGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp CCCCGCCTTCTCCTTGGCGTCTTTCTCAGGCTCCACTaGCTCAGTACTCACAAAGGCAAAAGCAGGGCCGTT +
Preference number: 6 (lower is better)
Translates to: PRLLLGVFLRLH*LSTHKGKSRAV
Trigger: AACGGCCCTGCTTTTGCCTTTGTGAGTACTGAGCCAGTGGAGCCTGAGAAAGACGCCAAGGAGAAGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TGGCGGACTATAGTAGACTCGGATTCCCGTCTTGTCTaGAGCCGTGTAGCTGCGCTGCATCTGTCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: WRTIVDSDSRLV*SRVAALHLSPC
Trigger: GCAGGGAGACAGATGCAGCGCAGCTACACGGCTCCAGACAAGACGGGAATCCGAGTCTACTATAGTCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp ACACCGATCGTCTCTGGAGCTTGGGTGAGCCGTACTTaGGCGAGCAACATGGCCGCTCAATGCGAGAATGGA +
Preference number: 6 (lower is better)
Translates to: TPIVSGAWVSRT*ASNMAAQCENG
Trigger: TCCATTCTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTACGGCTCACCCAAGCTCCAGAGACGATCGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp CTCGGGTTGATGGTAGCTGGCTGGCGAAAGGGGCTCTaGTTTCTTGCAGCTTTCCTCGCCTGCTGCAGTAGT +
Preference number: 6 (lower is better)
Translates to: LGLMVAGWRKGL*FLAAFLACCSS
Trigger: ACTACTGCAGCAGGCGAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp CTCTGCTGGTCTTCCTTCAGCTGGACCATTTTCTGGTaGAAGCTGTCAGCCTCCTCCTTCCGGAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: LCWSSFSWTIFW*KLSASSFRSCR
Trigger: GCGGCAGCTCCGGAAGGAGGAGGCTGACAGCTTCAACCAGAAAATGGTCCAGCTGAAGGAAGACCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GTTGTGCTTGAACTGCTGGGACTCCTGCACCAGGATGTTCTTCTCTaGGCTCCAGAACTTCTGCTCCAGTCGCCGCTGGAGGCTCAGACT +
Preference number: 6 (lower is better)
Translates to: VVLELLGLLHQDVLL*APELLLQSPLEAQT
Trigger: AGTCTGAGCCTCCAGCGGCGACTGGAGCAGAAGTTCTGGAGCCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS TCA 72 bp CTCGGTGCCCGGCCACACACGTTCCGGAAGAACTCCTaGACAATGCCATACTTGGGAGGCTCAGGTTTGGTT +
Preference number: 6 (lower is better)
Translates to: LGARPHTFRKNS*TMPYLGGSGLV
Trigger: AACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGAACGTGTGTGGCCGGGCACCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp CTCTGCAGCTCAAACTCCCGTCTCAGCAGCGCCCTCTaGTGGTCTTCCTTCAGCTGGACCATTTTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LCSSNSRLSSAL*WSSFSWTIFWL
Trigger: CAACCAGAAAATGGTCCAGCTGAAGGAAGACCAGCAGAGGGCGCTGCTGAGACGGGAGTTTGAGCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp ATGTCGTCACTCATGTTGCCCGACATCTCAAAGTCATaGAAGGCGGGGAAAGCAGGTCCGGAACCCGAGGTG +
Preference number: 6 (lower is better)
Translates to: MSSLMLPDISKS*KAGKAGPEPEV
Trigger: CACCTCGGGTTCCGGACCTGCTTTCCCCGCCTTGCATGACTTTGAGATGTCGGGCAACATGAGTGACGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp GATCCTGGATACACCCTCGGGTTGATGGTAGCTGGCTaGCGAAAGGGGCTCTGGTTTCTTGCAGCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: DPGYTLGLMVAG*RKGLWFLAAFL
Trigger: GAGGAAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp CTGAAGTCAGGTGGCTGGAAGTCAGAGCCAAGGTCTTaGGACAGCATGATCTCCTTAGCAGGGCCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: LKSGGWKSEPRS*DSMISLAGPWE
Trigger: CTCCCAGGGCCCTGCTAAGGAGATCATGCTGTCCAAAGACCTTGGCTCTGACTTCCAGCCACCTGACTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp CGCCTTCTTGTTCAGGATCCTGGATACACCCTCGGGTaGATGGTAGCTGGCTGGCGAAAGGGGCTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: RLLVQDPGYTLG*MVAGWRKGLWF
Trigger: AAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATCCTGAACAAGAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp TCTTTCCAGCTGTTGTCTTGCTTCTCCATGTCTGAGTaGTTCAGGACCCAGGGCTCGGCAGCCTTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: SFQLLSCFSMSE*FRTQGSAAFCN
Trigger: GTTGCAGAAGGCTGCCGAGCCCTGGGTCCTGAAGCACTCAGACATGGAGAAGCAAGACAACAGCTGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TGCAGCTCAAACTCCCGTCTCAGCAGCGCCCTCTGCTaGTCTTCCTTCAGCTGGACCATTTTCTGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: CSSNSRLSSALC*SSFSWTIFWLK
Trigger: CTTCAACCAGAAAATGGTCCAGCTGAAGGAAGACCAGCAGAGGGCGCTGCTGAGACGGGAGTTTGAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TACTTGGGCGAGCAACATGGCCGCTCAATGCGAGAATaGACCTTGTCCAGGGAGGAAGAGATCTGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: YLGEQHGRSMRE*TLSREEEICLL
Trigger: CAGCAAGCAGATCTCTTCCTCCCTGGACAAGGTCCATTCTCGCATTGAGCGGCCATGTTGCTCGCCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp TCAGGATCCTGGATACACCCTCGGGTTGATGGTAGCTaGCTGGCGAAAGGGGCTCTGGTTTCTTGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: SGSWIHPRVDGS*LAKGALVSCSF
Trigger: AAAGCTGCAAGAAACCAGAGCCCCTTTCGCCAGCCAGCTACCATCAACCCGAGGGTGTATCCAGGATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp AGCTCCTCCTTCATGCTGTCGTTCTCCTTAGCCAACTaGGTGAGCTTCTTGCACATGAGGGCCGACTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSFMLSFSLAN*VSFLHMRADSS
Trigger: GGAGGAGTCGGCCCTCATGTGCAAGAAGCTCACCAAGTTGGCTAAGGAGAACGACAGCATGAAGGAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp GTCTTCTCACTTCGTGCCTCTTTCCAGCTGTTGTCTTaGTTCTCCATGTCTGAGTGCTTCAGGACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VFSLRASFQLLS*FSMSECFRTQG
Trigger: GCCCTGGGTCCTGAAGCACTCAGACATGGAGAAGCAAGACAACAGCTGGAAAGAGGCACGAAGTGAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp ATGCCCAGTTTCCACACAGACTCGGTGCTCCCAGAGTaGTCCACCACACTAAAGAGGCTAGAAAGCCCATCA +
Preference number: 6 (lower is better)
Translates to: MPSFHTDSVLPE*STTLKRLESPS
Trigger: TGATGGGCTTTCTAGCCTCTTTAGTGTGGTGGAGCACTCTGGGAGCACCGAGTCTGTGTGGAAACTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp CACATGAGGGCCGACTCCTCCTTTGCAAAATGCAGCTaGCACTTCAGGTCTGCACTATCCTCCTGTGCAGTA +
Preference number: 6 (lower is better)
Translates to: HMRADSSFAKCS*HFRSALSSCAV
Trigger: TACTGCACAGGAGGATAGTGCAGACCTGAAGTGCCAGCTGCATTTTGCAAAGGAGGAGTCGGCCCTCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp ACTCCTGAACAATGCCATACTTGGGAGGCTCAGGTTTaGTTCGGGCCTCAGACATGCCCAGTTTCCACACAG +
Preference number: 6 (lower is better)
Translates to: TPEQCHTWEAQV*FGPQTCPVSTQ
Trigger: CTGTGTGGAAACTGGGCATGTCTGAGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CCA 72 bp ACACGTTCCGGAAGAACTCCTGAACAATGCCATACTTaGGAGGCTCAGGTTTGGTTCGGGCCTCAGACATGC +
Preference number: 6 (lower is better)
Translates to: TRSGRTPEQCHT*EAQVWFGPQTC
Trigger: GCATGTCTGAGGCCCGAACCAAACCTGAGCCTCCCAAGTATGGCATTGTTCAGGAGTTCTTCCGGAACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp TCCTCCTTCATGCTGTCGTTCTCCTTAGCCAACTTGGTGAGCTTCTaGCACATGAGGGCCGACTCCTCCTTTGCAAAATGCAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSFMLSFSLANLVSF*HMRADSSFAKCSWH
Trigger: GTGCCAGCTGCATTTTGCAAAGGAGGAGTCGGCCCTCATGTGCAAGAAGCTCACCAAGTTGGCTAAGGAGAACGACAGCATGAAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp CAGCGCTTCAGGAACCACCGGAGCTTCATGAAGAGCAGCAGAAAGTaGTGCTTGAACTGCTGGGACTCCTGCACCAGGATGTTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QRFRNHRSFMKSSRK*CLNCWDSCTRMFFS
Trigger: AGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAAGCTCCGGTGGTTCCTGAAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp CACCGGAGCTTCATGAAGAGCAGCAGAAAGTTGTGCTaGAACTGCTGGGACTCCTGCACCAGGATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: HRSFMKSSRKLC*NCWDSCTRMFF
Trigger: GAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAAGCTCCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp TTCAGGAACCACCGGAGCTTCATGAAGAGCAGCAGAAAGTTGTGCTaGAACTGCTGGGACTCCTGCACCAGGATGTTCTTCTCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: FRNHRSFMKSSRKLC*NCWDSCTRMFFSWL
Trigger: GAGCCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAAGCTCCGGTGGTTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp AGCAGCAGAAAGTTGTGCTTGAACTGCTGGGACTCCTaGACCAGGATGTTCTTCTCTTGGCTCCAGAACTTC +
Preference number: 6 (lower is better)
Translates to: SSRKLCLNCWDS*TRMFFSWLQNF
Trigger: GAAGTTCTGGAGCCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp AGAGACACCCTCCTTGTCATGGGTCTTCTCACTTCGTaGCTCTTTCCAGCTGTTGTCTTGCTTCTCCATGTC +
Preference number: 6 (lower is better)
Translates to: RDTLLVMGLLTS*LFPAVVLLLHV
Trigger: GACATGGAGAAGCAAGACAACAGCTGGAAAGAGGCACGAAGTGAGAAGACCCATGACAAGGAGGGTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp ATGCTGTCGTTCTCCTTAGCCAACTTGGTGAGCTTCTaGCACATGAGGGCCGACTCCTCCTTTGCAAAATGC +
Preference number: 6 (lower is better)
Translates to: MLSFSLANLVSF*HMRADSSFAKC
Trigger: GCATTTTGCAAAGGAGGAGTCGGCCCTCATGTGCAAGAAGCTCACCAAGTTGGCTAAGGAGAACGACAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TCATGGGTCTTCTCACTTCGTGCCTCTTTCCAGCTGTaGTCTTGCTTCTCCATGTCTGAGTGCTTCAGGACC +
Preference number: 6 (lower is better)
Translates to: SWVFSLRASFQL*SCFSMSECFRT
Trigger: GGTCCTGAAGCACTCAGACATGGAGAAGCAAGACAACAGCTGGAAAGAGGCACGAAGTGAGAAGACCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp ACGCAGTTGGTGATCTCCTTCATGTCGTCACTCATGTaGCCCGACATCTCAAAGTCATGCAAGGCGGGGAAA +
Preference number: 6 (lower is better)
Translates to: TQLVISFMSSLM*PDISKSCKAGK
Trigger: TTTCCCCGCCTTGCATGACTTTGAGATGTCGGGCAACATGAGTGACGACATGAAGGAGATCACCAACTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 72 bp TGCTCCACCACACTAAAGAGGCTAGAAAGCCCATCATaGATGTTCCTCAGTACAGGGCTATCCCGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: CSTTLKRLESPS*MFLSTGLSRVV
Trigger: CACCACACGGGATAGCCCTGTACTGAGGAACATCAATGATGGGCTTTCTAGCCTCTTTAGTGTGGTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS CAA 90 bp GAGCAGTCGAGCAAACTTTCAAACTCAGACATGGAGGAGACTGATTaGGTCCTCTTTAAGCCAGTTCCCCCGAGCTCAGCTTCAGAGACA +
Preference number: 6 (lower is better)
Translates to: EQSSKLSNSDMEETD*VLFKPVPPSSASET
Trigger: TGTCTCTGAAGCTGAGCTCGGGGGAACTGGCTTAAAGAGGACCAAATCAGTCTCCTCCATGTCTGAGTTTGAAAGTTTGCTCGACTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7
CDS GCA 72 bp AGCTTCATGAAGAGCAGCAGAAAGTTGTGCTTGAACTaGTGGGACTCCTGCACCAGGATGTTCTTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SFMKSSRKLCLN*WDSCTRMFFSW
Trigger: CCAAGAGAAGAACATCCTGGTGCAGGAGTCCCAGCAGTTCAAGCACAACTTTCTGCTGCTCTTCATGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069098.7