RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006818

Ensembl transcript IDs: ENSMUST00000007012.6, ENSMUST00000232726.2, ENSMUST00000233451.2

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGGTGCCTGTGGGGTCCTGTTCAGAGCAAAGTAGGTGGCCGCCATaGCGCCCTTGCTGGGGGCTGCTGGAAGAGACTGGTCCTGCATGC +
Preference number: 1 (lower is better)
Translates to: SVPVGSCSEQSRWPP*RPCWGLLEETGPAC
Trigger: GCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACCCCACAGGCACCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp GCTCTAGCCTCGGTGCCTGTGGGGTCCTGTTCAGAGCAAAGTAGGTaGCCGCCATGGCGCCCTTGCTGGGGGCTGCTGGAAGAGACTGGT +
Preference number: 1 (lower is better)
Translates to: ALASVPVGSCSEQSR*PPWRPCWGLLEETG
Trigger: ACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACCCCACAGGCACCGAGGCTAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp GCTGCAAGCAAACCCAGCCTGAGCCGTGAGCAGCTGGAGCAAGGGTaGATGCCAGAGAGGCCCTCGGAGGGTGCCAGAGCTCCTGTTCAT +
Preference number: 1 (lower is better)
Translates to: AASKPSLSREQLEQG*MPERPSEGARAPVH
Trigger: ATGAACAGGAGCTCTGGCACCCTCCGAGGGCCTCTCTGGCATGCACCCTTGCTCCAGCTGCTCACGGCTCAGGCTGGGTTTGCTTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp CACCTGCACAGACGAGCCATGCTGGCTTCCCCTTCCACCTGTCCCTaGCACAGAGGGACCCCAGAGACCTTTCCCACTCCAGGTGTCTCA +
Preference number: 1 (lower is better)
Translates to: HLHRRAMLASPSTCP*HRGTPETFPTPGVS
Trigger: TGAGACACCTGGAGTGGGAAAGGTCTCTGGGGTCCCTCTGTGGCAGGGACAGGTGGAAGGGGAAGCCAGCATGGCTCGTCTGTGCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp GCCGCCATGGCGCCCTTGCTGGGGGCTGCTGGAAGAGACTGGTCCTaGATGCTGGGTCTAGATTTGGTAAGTCCGAAGCAGAGCTGTTGG +
Preference number: 1 (lower is better)
Translates to: AAMAPLLGAAGRDWS*MLGLDLVSPKQSCW
Trigger: CCAACAGCTCTGCTTCGGACTTACCAAATCTAGACCCAGCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp GGCCAACAGGCGCCTCCTACAGGTGCCTCTACTGGGCAGAGGGGCTaGTTCTCAGACTGGCAGGTTCTGAGCCACAGTGGAGTGTCTTCT +
Preference number: 1 (lower is better)
Translates to: GQQAPPTGASTGQRG*FSDWQVLSHSGVSS
Trigger: AGAAGACACTCCACTGTGGCTCAGAACCTGCCAGTCTGAGAAGCAGCCCCTCTGCCCAGTAGAGGCACCTGTAGGAGGCGCCTGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp CAGAGCAAAGTAGGTGGCCGCCATGGCGCCCTTGCTGGGGGCTGCTaGAAGAGACTGGTCCTGCATGCTGGGTCTAGATTTGGTAAGTCC +
Preference number: 1 (lower is better)
Translates to: QSKVGGRHGALAGGC*KRLVLHAGSRFGKS
Trigger: GGACTTACCAAATCTAGACCCAGCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp AGAGACTTCAGGACACACAAGTCCCTCCTCTCCGACCAGGAGGAGTaGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTACTCTGCATG +
Preference number: 1 (lower is better)
Translates to: RDFRTHKSLLSDQEE*STPRGKGLTRLLCM
Trigger: CATGCAGAGTAACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAGGAGGGACTTGTGTGTCCTGAAGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp GTTCAGAGCAAAGTAGGTGGCCGCCATGGCGCCCTTGCTGGGGGCTaGTGGAAGAGACTGGTCCTGCATGCTGGGTCTAGATTTGGTAAG +
Preference number: 1 (lower is better)
Translates to: VQSKVGGRHGALAGG*WKRLVLHAGSRFGK
Trigger: CTTACCAAATCTAGACCCAGCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp CCTCCTACAGGTGCCTCTACTGGGCAGAGGGGCTGCTTCTCAGACTaGCAGGTTCTGAGCCACAGTGGAGTGTCTTCTGACCTGAGTCCA +
Preference number: 1 (lower is better)
Translates to: PPTGASTGQRGCFSD*QVLSHSGVSSDLSP
Trigger: TGGACTCAGGTCAGAAGACACTCCACTGTGGCTCAGAACCTGCCAGTCTGAGAAGCAGCCCCTCTGCCCAGTAGAGGCACCTGTAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp GGCCACTACAACCTGGTAGACGTGAGTCTCTTCATGCCTCTGCGTTaGGCCAAGCTAGATGAGAGCACAGGCTCTAGCCTCGGTGCCTGT +
Preference number: 1 (lower is better)
Translates to: GHYNLVDVSLFMPLR*AKLDESTGSSLGAC
Trigger: ACAGGCACCGAGGCTAGAGCCTGTGCTCTCATCTAGCTTGGCCCAACGCAGAGGCATGAAGAGACTCACGTCTACCAGGTTGTAGTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp GAGACACTGAGAGCCCTGAGTGAGCCCAGGGAGGCCCCAGCAGGGTaGTATGAGGTGACAGATTCATTTGGTTTCACTCAGGAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: ETLRALSEPREAPAG*YEVTDSFGFTQEER
Trigger: TCTCTCCTCCTGAGTGAAACCAAATGAATCTGTCACCTCATAGCACCCTGCTGGGGCCTCCCTGGGCTCACTCAGGGCTCTCAGTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp AGGGGGCAGCAGTGTAGTGGGTACTGGCTCTGCCCGGCAATTTCCTaGGGCTCCTGTCTCAACCAACAGAAATCACGCTCTCAAATAGAC +
Preference number: 1 (lower is better)
Translates to: RGQQCSGYWLCPAIS*GSCLNQQKSRSQID
Trigger: GTCTATTTGAGAGCGTGATTTCTGTTGGTTGAGACAGGAGCCCCAGGAAATTGCCGGGCAGAGCCAGTACCCACTACACTGCTGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp CCAGAGACCTTTCCCACTCCAGGTGTCTCACAGTCTTGCGGGTGGTaGAGGGCAGCAAAATGTGCCAGAGAGAATGAAGAGTCACGGTGT +
Preference number: 1 (lower is better)
Translates to: PETFPTPGVSQSCGW*RAAKCARENEESRC
Trigger: ACACCGTGACTCTTCATTCTCTCTGGCACATTTTGCTGCCCTTCACCACCCGCAAGACTGTGAGACACCTGGAGTGGGAAAGGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp ACCCAGGGTCCAGTTCTCCAGAGATATACAATTCATGGGGCTGAATaGCTTCCCAGAATGCCCTGTGGCCTAGTGCCCATGGCTGACATC +
Preference number: 1 (lower is better)
Translates to: TQGPVLQRYTIHGAE*LPRMPCGLVPMADI
Trigger: GATGTCAGCCATGGGCACTAGGCCACAGGGCATTCTGGGAAGCCATTCAGCCCCATGAATTGTATATCTCTGGAGAACTGGACCCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 90 bp TATGTTCTGAACATTCCACTGGGGCAGGCATTGCAGAAGCAGCCGTaGTCCACCTGTGGTCTTCCTAGTGTAAGCCTGCTGTGGCCAACA +
Preference number: 1 (lower is better)
Translates to: YVLNIPLGQALQKQP*STCGLPSVSLLWPT
Trigger: TGTTGGCCACAGCAGGCTTACACTAGGAAGACCACAGGTGGACCACGGCTGCTTCTGCAATGCCTGCCCCAGTGGAATGTTCAGAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp GAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTaGGTTCCAGGACTGCCAGGGATACACAATGAAACCCTGTCTCAA +
Preference number: 1 (lower is better)
Translates to: EAGGFLSSRPAWSTK*VPGLPGIHNETLSQ
Trigger: TTGAGACAGGGTTTCATTGTGTATCCCTGGCAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 90 bp AGTGGCCGCCGTCTCAACACACAGCCAGAAAGTGTGAACATGGAGTaGGCTGTAAACGGAACTGCTGATCATGTAAACGCAGCGCAGGCT +
Preference number: 1 (lower is better)
Translates to: SGRRLNTQPESVNME*AVNGTADHVNAAQA
Trigger: AGCCTGCGCTGCGTTTACATGATCAGCAGTTCCGTTTACAGCTCACTCCATGTTCACACTTTCTGGCTGTGTGTTGAGACGGCGGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp TGGTTCCTGGGATTTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCAAACTCACTTC +
Preference number: 1 (lower is better)
Translates to: WFLGFELWTFGRAVG*SYPLSHLTSPQTHF
Trigger: GAAGTGAGTTTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 90 bp CTGAAAGAGGTGATGCGGCCACATGACCATGAAGGGGACAGGTTATaGTCGCCTCCTCAGCCATGCCTTCTGTGTTCTGTTGTTCTTTCT +
Preference number: 1 (lower is better)
Translates to: LKEVMRPHDHEGDRL*SPPQPCLLCSVVLS
Trigger: AGAAAGAACAACAGAACACAGAAGGCATGGCTGAGGAGGCGAGCATAACCTGTCCCCTTCATGGTCATGTGGCCGCATCACCTCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp ATCTTGTTGTGGATGGTTGTGAGCCACCATGTGGTTCCTGGGATTTaGACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACCCACT +
Preference number: 1 (lower is better)
Translates to: ILLWMVVSHHVVPGI*TLDLRKSSGVLLPT
Trigger: AGTGGGTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCACATGGTGGCTCACAACCATCCACAACAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 90 bp TTTCCTAGGGTCCGGGTTGCAAAGATGAGCCTCTCCAAAGAGCTTTaGCTGGGACCAAAGACTTCTGTGGTATTGGAGGTTGGGTCTGCA +
Preference number: 1 (lower is better)
Translates to: FPRVRVAKMSLSKEL*LGPKTSVVLEVGSA
Trigger: TGCAGACCCAACCTCCAATACCACAGAAGTCTTTGGTCCCAGTCAAAGCTCTTTGGAGAGGCTCATCTTTGCAACCCGGACCCTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp ACAGTCTTGCGGGTGGTGAAGGGCAGCAAAATGTGCCAGAGAGAATaGAGAGTCACGGTGTATCTCCTCCTATGCTTGAGAGAAGCGGTA +
Preference number: 1 (lower is better)
Translates to: TVLRVVKGSKMCQRE*RVTVYLLLCLREAV
Trigger: TACCGCTTCTCTCAAGCATAGGAGGAGATACACCGTGACTCTTCATTCTCTCTGGCACATTTTGCTGCCCTTCACCACCCGCAAGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp GCCTCTCCAAAGAGCTTTGACTGGGACCAAAGACTTCTGTGGTATTaGAGGTTGGGTCTGCAAGCCTTTTTCTCCCTTTCTCTCCACAGC +
Preference number: 1 (lower is better)
Translates to: ASPKSFDWDQRLLWY*RLGLQAFFSLSLHS
Trigger: GCTGTGGAGAGAAAGGGAGAAAAAGGCTTGCAGACCCAACCTCCAATACCACAGAAGTCTTTGGTCCCAGTCAAAGCTCTTTGGAGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp AGAGGCACTCTTTGGGTGATTGTGGACAGAGTCAGGCATCTAAGCTaGATGCTTTCACAGGGCCACTGGCATTGCCAGAACATCCAGAAA +
Preference number: 1 (lower is better)
Translates to: RGTLWVIVDRVRHLS*MLSQGHWHCQNIQK
Trigger: TTTCTGGATGTTCTGGCAATGCCAGTGGCCCTGTGAAAGCATCCAGCTTAGATGCCTGACTCTGTCCACAATCACCCAAAGAGTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp TTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCTCAAACTCACTTCTTTATGCTTTTGC +
Preference number: 1 (lower is better)
Translates to: LNFGPSEEQWGALTH*AISPALKLTSLCFC
Trigger: GCAAAAGCATAAAGAAGTGAGTTTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 90 bp ATCACGACTTCCAAAGGCTTTTTCCTAGGGTCCGGGTTGCAAAGATaGGCCTCTCCAAAGAGCTTTGACTGGGACCAAAGACTTCTGTGG +
Preference number: 1 (lower is better)
Translates to: ITTSKGFFLGSGLQR*ASPKSFDWDQRLLW
Trigger: CCACAGAAGTCTTTGGTCCCAGTCAAAGCTCTTTGGAGAGGCTCATCTTTGCAACCCGGACCCTAGGAAAAAGCCTTTGGAAGTCGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp TGTGCCAGAGAGAATGAAGAGTCACGGTGTATCTCCTCCTATGCTTaGGAGAAGCGGTACAATGCAGGGGAAATCCCAACGGGCATCTTA +
Preference number: 1 (lower is better)
Translates to: CARENEESRCISSYA*EKRYNAGEIPTGIL
Trigger: TAAGATGCCCGTTGGGATTTCCCCTGCATTGTACCGCTTCTCTCAAGCATAGGAGGAGATACACCGTGACTCTTCATTCTCTCTGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp TATCAAGAATCGGAAGGATTCAGGCCCAGAACATTAACTGGGAGATaGTCTCAGCCTTGGGCAGAGCATTCACTGAGAAAGCAGGAGACC +
Preference number: 1 (lower is better)
Translates to: YQESEGFRPRTLTGR*SQPWAEHSLRKQET
Trigger: GGTCTCCTGCTTTCTCAGTGAATGCTCTGCCCAAGGCTGAGATCATCTCCCAGTTAATGTTCTGGGCCTGAATCCTTCCGATTCTTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp GTGGACGGAAGTCTCATCAGCTTACCGCTAAGCCTGCCCTGTATATaGAATTCCCTCCTCTTTTGGAACAGCTCACATTCATCTGCATAC +
Preference number: 1 (lower is better)
Translates to: VDGSLISLPLSLPCI*NSLLFWNSSHSSAY
Trigger: GTATGCAGATGAATGTGAGCTGTTCCAAAAGAGGAGGGAATTTCATATACAGGGCAGGCTTAGCGGTAAGCTGATGAGACTTCCGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 90 bp CCAGCAAACACAGAGTGGCACACAACCATCTGTAATGGGATCCAATaGCTTCTTCTGGTGTGGCTGAAGACAGCTACATTGCACTCATAT +
Preference number: 1 (lower is better)
Translates to: PANTEWHTTICNGIQ*LLLVWLKTATLHSY
Trigger: ATATGAGTGCAATGTAGCTGTCTTCAGCCACACCAGAAGAAGGCATTGGATCCCATTACAGATGGTTGTGTGCCACTCTGTGTTTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 90 bp GAAATCACGCTCTCAAATAGACTCTACCCATCTAGACTCTTGGGTTaGTTGCTTTCATCCTGCCAAGTCAGTGACAGAGTCAGGGAGAAG +
Preference number: 1 (lower is better)
Translates to: EITLSNRLYPSRLLG*LLSSCQVSDRVREK
Trigger: CTTCTCCCTGACTCTGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTAGAGTCTATTTGAGAGCGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 90 bp CAACAGAAATCACGCTCTCAAATAGACTCTACCCATCTAGACTCTTaGGTTGGTTGCTTTCATCCTGCCAAGTCAGTGACAGAGTCAGGG +
Preference number: 1 (lower is better)
Translates to: QQKSRSQIDSTHLDS*VGCFHPAKSVTESG
Trigger: CCCTGACTCTGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTAGAGTCTATTTGAGAGCGTGATTTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp CACACACACATGTGTTTGGTACTATCCCTGGCTTTAGGCTTCCATTaGATGAATGAATCCTTAATGAATCCCGACCAACCAGGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: HTHMCLVLSLALGFH*MNESLMNPDQPGRP
Trigger: TGGCCTCCCTGGTTGGTCGGGATTCATTAAGGATTCATTCATTCAATGGAAGCCTAAAGCCAGGGATAGTACCAAACACATGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 90 bp CGCAGACTACAGCCTGAAAACAGGTTAGACAACAGAAACACAAGATaGAACATAGGACCACAGCTTCTAAGAAGAGCATCACTCCCACTG +
Preference number: 1 (lower is better)
Translates to: RRLQPENRLDNRNTR*NIGPQLLRRASLPL
Trigger: CAGTGGGAGTGATGCTCTTCTTAGAAGCTGTGGTCCTATGTTGCATCTTGTGTTTCTGTTGTCTAACCTGTTTTCAGGCTGTAGTCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp GCAAATGTCATCAGACTACCTGCCCACAAATCTCTGCTACACAACTaGCTAGCTGTATTCCCTCACACTAGTCATCTACTCTTACTCTAC +
Preference number: 1 (lower is better)
Translates to: ANVIRLPAHKSLLHN*LAVFPHTSHLLLLY
Trigger: GTAGAGTAAGAGTAGATGACTAGTGTGAGGGAATACAGCTAGTCAGTTGTGTAGCAGAGATTTGTGGGCAGGTAGTCTGATGACATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 90 bp GACTTTAAAGAACAGGGATTAAAACGATCCTGTCACGTGCTCCTCTaGCTGACTCCACAAGAGATTTCAAGTATCAAGTACTGGGTGAGG +
Preference number: 1 (lower is better)
Translates to: DFKEQGLKRSCHVLL*LTPQEISSIKYWVR
Trigger: CCTCACCCAGTACTTGATACTTGAAATCTCTTGTGGAGTCAGTCAGAGGAGCACGTGACAGGATCGTTTTAATCCCTGTTCTTTAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 90 bp GAAAAATCTGTGTCTCTAAAAACTAATGTTCTGAAGACACCCTACTaGCCTCACTCAGAAACCCATTTGCCGCTACTGAGAAAGGTGCCA +
Preference number: 1 (lower is better)
Translates to: EKSVSLKTNVLKTPY*PHSETHLPLLRKVP
Trigger: TGGCACCTTTCTCAGTAGCGGCAAATGGGTTTCTGAGTGAGGTCAGTAGGGTGTCTTCAGAACATTAGTTTTTAGAGACACAGATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 90 bp GGTACTCATGGCAGGCGGCGCCTCTCAGATAAACAGGGGCTTCGCTaGTCTAAAGAGATCTTATTACAAATTCACATACTTAGGAATTAT +
Preference number: 1 (lower is better)
Translates to: GTHGRRRLSDKQGLR*SKEILLQIHILRNY
Trigger: ATAATTCCTAAGTATGTGAATTTGTAATAAGATCTCTTTAGATCAGCGAAGCCCCTGTTTATCTGAGAGGCGCCGCCTGCCATGAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 90 bp CAGGACGATCCTCACTTAAAAAGCCAAACAATATCCAAAGACCAGTaGACACAGGTAGTTCAAAATCACACACGTTCCAACCATAGGACA +
Preference number: 1 (lower is better)
Translates to: QDDPHLKSQTISKDQ*TQVVQNHTRSNHRT
Trigger: TGTCCTATGGTTGGAACGTGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATATTGTTTGGCTTTTTAAGTGAGGATCGTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 90 bp TCATACAGCACACTGTTGGTTTGTAAAGACAAGATTAGCTGTTTTTaGATGTCTGCCTATAGAAAACCCAGAGGCACCATTACCTTCCTC +
Preference number: 1 (lower is better)
Translates to: SYSTLLVCKDKISCF*MSAYRKPRGTITFL
Trigger: GAGGAAGGTAATGGTGCCTCTGGGTTTTCTATAGGCAGACATGCAAAAACAGCTAATCTTGTCTTTACAAACCAACAGTGTGCTGTATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 90 bp CCTACCTACTTTGTCCATCTTGAACACATTCATACAGCACACTGTTaGTTTGTAAAGACAAGATTAGCTGTTTTTGCATGTCTGCCTATA +
Preference number: 1 (lower is better)
Translates to: PTYFVHLEHIHTAHC*FVKTRLAVFACLPI
Trigger: TATAGGCAGACATGCAAAAACAGCTAATCTTGTCTTTACAAACCAACAGTGTGCTGTATGAATGTGTTCAAGATGGACAAAGTAGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 90 bp AGTTCAGTAATGCTGTCTACAACATTAAATATAACAAGGACCCAATaGGCCAAAGAAACGTATACACACTCAGGAATTAACAGTATGCTG +
Preference number: 1 (lower is better)
Translates to: SSVMLSTTLNITRTQ*AKETYTHSGINSML
Trigger: CAGCATACTGTTAATTCCTGAGTGTGTATACGTTTCTTTGGCTCATTGGGTCCTTGTTATATTTAATGTTGTAGACAGCATTACTGAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp GCTGAGAGGACGTTGGGCAGGGCGACTGAGGCTGGAGACTTGGCTGGCCACTACCCGAAGCAGAGCTGTTaGTGGCCCAGCAGGGCGATG +
Preference number: 2 (lower is better)
Translates to: AERTLGRATEAGDLAGHYPKQSC*WPSRAM
Trigger: CATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGG...GTAGTGGCCAGCCAAGTCTCCAGCCTCAGTCGCCCTGCCCAACGTCCTCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp CCTCTCCGACCAGGAGGAGTGGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTGATCCTGGGAGGGACTaGAGATTCCTCCCTAACCAC +
Preference number: 2 (lower is better)
Translates to: PLRPGGVEHATGEGSHSVDPGRD*RFLPNH
Trigger: GTGGTTAGGGAGGAATCTTCAGTCCCTCCCAGGATC...AACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 90 bp TGTGAGGCTGAGAGGACGTTGGGCAGGGCGACTGAGGCTGGAGACTaGGCTGGCCACTACAACCTGGTAGACGTGAGTCTCTTCATGCCT +
Preference number: 2 (lower is better)
Translates to: CEAERTLGRATEAGD*AGHYNLVDVSLFMP
Trigger: AGGCATGAAGAGACTCACGTCTACCAGGTTGTAGTGGCCAGCCAAGTCTCCAGCCTCAGTCGCCCTGCCCAACGTCCTCTCAGCCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCCCCATTTGCCGCTACTaGGAAAGGTGCCACCACACC +
Preference number: 2 (lower is better)
Translates to: KREGPGTPPADVRTLSDSPICRY*ERCHHT
Trigger: GGTGTGGTGGCACCTTTCTCAGTAGCGGCAAATGGG...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR GCA 90 bp GCTGAGAGGACGTTGGGCAGGGCGACTGAGGCTGGAGACTTGGCTGGCCACTACGGAAGAGACTGGTCCTaGATGCTGGGTCTAGATTTG +
Preference number: 2 (lower is better)
Translates to: AERTLGRATEAGDLAGHYGRDWS*MLGLDL
Trigger: CAAATCTAGACCCAGCATGCAGGACCAGTCTCTTCC...GTAGTGGCCAGCCAAGTCTCCAGCCTCAGTCGCCCTGCCCAACGTCCTCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp GAGGCCCTCGGAGGGTGCCAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCTGAAGCAGAGCTGTTGGTaGCCCAGCAGGGCGATGAAG +
Preference number: 2 (lower is better)
Translates to: EALGGCQSSCSFPRGQNLKQSCW*PSRAMK
Trigger: CTTCATCGCCCTGCTGGGCCACCAACAGCTCTGCTT...CAGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTGGCACCCTCCGAGGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp ACAGAGGGACCCCAGAGACCTTTCCCACTCCAGGTGTCTCACAGTCTTGCGGGTTCTGCAGGGCAAGGCTaGGCATCCTTCCAGACACAT +
Preference number: 2 (lower is better)
Translates to: TEGPQRPFPLQVSHSLAGSAGQG*ASFQTH
Trigger: ATGTGTCTGGAAGGATGCTCAGCCTTGCCCTGCAGA...ACCCGCAAGACTGTGAGACACCTGGAGTGGGAAAGGTCTCTGGGGTCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR GCA 90 bp CCCTCGGAGGGTGCCAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCTGTCACCTTCGAAAGTGGCTCTaGTGTCTCCAGGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: PSEGARAPVHFPEDRICHLRKWL*CLQAGT
Trigger: AGTCCCTGCCTGGAGACAGCAGAGCCACTTTCGAAG...GTGACAGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTGGCACCCTCCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp CAAGCACCCCATCCCCACCTCCTTCAGTGGAGCGCTCATCATGTTCTCAGCCCAAGGATGCGTTTGGTTTaGCTGATGGTCTCCTCCATC +
Preference number: 2 (lower is better)
Translates to: QAPHPHLLQWSAHHVLSPRMRLV*LMVSSI
Trigger: GATGGAGGAGACCATCAGTCAAACCAAACGCATCCT...TGGGCTGAGAACATGATGAGCGCTCCACTGAAGGAGGTGGGGATGGGGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp TCCGAAGCAGAGCTGTTGGTGGCCCAGCAGGGCGATGAAGTCAGCTCATGTCAGAGACTTCTGTGGTATTaGAGGTTGGGTCTGCAAGCC +
Preference number: 2 (lower is better)
Translates to: SEAELLVAQQGDEVSSCQRLLWY*RLGLQA
Trigger: GGCTTGCAGACCCAACCTCCAATACCACAGAAGTCT...CTGACATGAGCTGACTTCATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp ACAGAGGGACCCCAGAGACCTTTCCCACTCCAGGTGTCTCACAGTCTTGCGGGTTCCTGGCTATCACCTTaGACAGCTTCCAGAATCACG +
Preference number: 2 (lower is better)
Translates to: TEGPQRPFPLQVSHSLAGSWLSP*TASRIT
Trigger: CGTGATTCTGGAAGCTGTCCAAGGTGATAGCCAGGA...ACCCGCAAGACTGTGAGACACCTGGAGTGGGAAAGGTCTCTGGGGTCCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp ACTAACACTCTCAGAGAGACAGTGGGACACGTAGGTGACATCAGGATGGTAAAAAGTAGGTGGCCGCCATaGCGCCCTTGCTGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: TNTLRETVGHVGDIRMVKSRWPP*RPCWGL
Trigger: CAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACT...TTTTACCATCCTGATGTCACCTACGTGTCCCACTGTCTCTCTGAGAGTGTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp GAGGCCCTCGGAGGGTGCCAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCTGGTGAGAGGCACTCTTTaGGTGATTGTGGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: EALGGCQSSCSFPRGQNLVRGTL*VIVDRV
Trigger: GACTCTGTCCACAATCACCCAAAGAGTGCCTCTCAC...CAGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTGGCACCCTCCGAGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCGCCAGGGATACACAATaGAACCCTGTCTCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: KREGPGTPPADVRTLSDSARDTQ*NPVSKS
Trigger: GCTTTTTGAGACAGGGTTTCATTGTGTATCCCTGGC...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR GCA 90 bp AAATATCTGTACAGTGGCCGCCGTCTCAACACACAGCCAGAAAGTGTGAACATGGCCCTTGCTGGGGGCTaGTGGAAGAGACTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: KYLYSGRRLNTQPESVNMALAGG*WKRLVL
Trigger: CAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGC...CATGTTCACACTTTCTGGCTGTGTGTTGAGACGGCGGCCACTGTACAGATATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCAAAAAGAGCAGGGTGTaGTGGCACACGCCTTTAATC +
Preference number: 2 (lower is better)
Translates to: KREGPGTPPADVRTLSDSKKSRV*WHTPLI
Trigger: GATTAAAGGCGTGTGCCACCACACCCTGCTCTTTTT...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR TCA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCATGACAGGAAGATGGTaGGACGAATGTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: KREGPGTPPADVRTLSDSMTGRW*DECEKA
Trigger: TGCCTTTTCACATTCGTCTCACCATCTTCCTGTCAT...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR GCA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCGTTAAAAGCACTGACTaGTCTTCCAAAGGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: KREGPGTPPADVRTLSDSVKSTD*SSKGPE
Trigger: CTCAGGACCTTTGGAAGAGCAGTCAGTGCTTTTAAC...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp CATTCACTGAGAAAGCAGGAGACCATCCCCAGGGACACTGGAAATGGCACACAGTTCCTCCCTAACCACTaGCCAAGGCCAATGTGGCTT +
Preference number: 2 (lower is better)
Translates to: HSLRKQETIPRDTGNGTQFLPNH*PRPMWL
Trigger: AAGCCACATTGGCCTTGGCCAGTGGTTAGGGAGGAA...CTGTGTGCCATTTCCAGTGTCCCTGGGGATGGTCTCCTGCTTTCTCAGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 90 bp CAGAGTCAGGCATCTAAGCTGGATGCTTTCACAGGGCCACTGGCATaGCCAGAACATCCAGAAACATCCAGCTCTTCGAAAGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: QSQASKLDAFTGPLA*PEHPETSSSSKVAL
Trigger: CAGAGCCACTTTCGAAGAGCTGGATGTTTCTGGATGTTCTGGCAATGCCAGTGGCCCTGTGAAAGCATCCAGCTTAGATGCCTGACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp ACTAACACTCTCAGAGAGACAGTGGGACACGTAGGTGACATCAGGATGGTAAAAGGCCCAGCAGGGCGATaGAGTCAGCTCATGTCAGCA +
Preference number: 2 (lower is better)
Translates to: TNTLRETVGHVGDIRMVKGPAGR*SQLMSA
Trigger: TGCTGACATGAGCTGACTTCATCGCCCTGCTGGGCC...TTTTACCATCCTGATGTCACCTACGTGTCCCACTGTCTCTCTGAGAGTGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp ACTAACACTCTCAGAGAGACAGTGGGACACGTAGGTGACATCAGGATGGTAAAATCAGAGCAAAGTAGGTaGCCGCCATGGCGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TNTLRETVGHVGDIRMVKSEQSR*PPWRPC
Trigger: GCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGA...TTTTACCATCCTGATGTCACCTACGTGTCCCACTGTCTCTCTGAGAGTGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 90 bp AATCTTGTTGTGGATGGTTGTGAGCCACCATGTGGTTCCTGGGATTaGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACCCAC +
Preference number: 2 (lower is better)
Translates to: NLVVDGCEPPCGSWD*NFGPSEEQWGALTH
Trigger: GTGGGTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCACATGGTGGCTCACAACCATCCACAACAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR TCA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCCTACTTTGTCCATCTTaGACACATTCATACAGCACA +
Preference number: 2 (lower is better)
Translates to: KREGPGTPPADVRTLSDSLLCPS*THSYST
Trigger: TGTGCTGTATGAATGTGTTCAAGATGGACAAAGTAG...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp GTGGCCCAGGAAAGCAGAGAGAGAGTGAATATGCTATACCACAGCAGGCAAATAGCTGCTGGAAGAGACTaGTCCTGCATGCTGGGTCTA +
Preference number: 2 (lower is better)
Translates to: VAQESRERVNMLYHSRQIAAGRD*SCMLGL
Trigger: TAGACCCAGCATGCAGGACCAGTCTCTTCCAGCAGC...TATTTGCCTGCTGTGGTATAGCATATTCACTCTCTCTCTGCTTTCCTGGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp ACTAACACTCTCAGAGAGACAGTGGGACACGTAGGTGACATCAGGATGGTAAAACTTGCTGGGGGCTGCTaGAAGAGACTGGTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: TNTLRETVGHVGDIRMVKLAGGC*KRLVLH
Trigger: ATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAG...TTTTACCATCCTGATGTCACCTACGTGTCCCACTGTCTCTCTGAGAGTGTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp AAATATCTGTACAGTGGCCGCCGTCTCAACACACAGCCAGAAAGTGTGAACATGCCAGCTCTTCGAAAGTaGCTCTGCTGTCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: KYLYSGRRLNTQPESVNMPALRK*LCCLQA
Trigger: TGCCTGGAGACAGCAGAGCCACTTTCGAAGAGCTGG...CATGTTCACACTTTCTGGCTGTGTGTTGAGACGGCGGCCACTGTACAGATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGTTAGACAACAGAAACACAAGATGGCCAAGGCCAATGTaGCTTCCTGGCTATCACCTT +
Preference number: 2 (lower is better)
Translates to: CSLRRLQPENRLDNRNTRWPRPM*LPGYHL
Trigger: AAGGTGATAGCCAGGAAGCCACATTGGCCTTGGCCA...TCTTGTGTTTCTGTTGTCTAACCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 90 bp AATTCCTGGAATCCACATGATCAAAGGAGAACTGCTTCCTGCAAGTaGTCCTCTAACTCCAACATGTGCCATGGCACACACTCCCATGCA +
Preference number: 2 (lower is better)
Translates to: NSWNPHDQRRTASCK*SSNSNMCHGTHSHA
Trigger: TGCATGGGAGTGTGTGCCATGGCACATGTTGGAGTTAGAGGACAACTTGCAGGAAGCAGTTCTCCTTTGATCATGTGGATTCCAGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 90 bp CCACTGAGCCATCTCACCAGCCCTCAAACTCACTTCTTTATGCTTTaGCAGCAGGTACTTACTTCAACAAACAAGCTAACTCCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: PLSHLTSPQTHFFML*QQVLTSTNKLTPLS
Trigger: GGACAGGGGAGTTAGCTTGTTTGTTGAAGTAAGTACCTGCTGCAAAAGCATAAAGAAGTGAGTTTGAGGGCTGGTGAGATGGCTCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 90 bp CCAACAGAAATCACGCTCTCAAATAGACTCTACCCATCTAGACTCTaGGGTTGGTTGCTTTCATCCTGCCAAGTCAGTGACAGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: PTEITLSNRLYPSRL*GWLLSSCQVSDRVR
Trigger: CCTGACTCTGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTAGAGTCTATTTGAGAGCGTGATTTCTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CCA 90 bp TGGTTCCTGGGATTTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACCCCCCAAAACAGAGATaGGATATTTCTGATGGTCTT +
Preference number: 2 (lower is better)
Translates to: WFLGFELWTFGRAVGCSYPPKQR*DISDGL
Trigger: AAGACCATCAGAAATATCCCATCTCTGTTTTGGGGG...GTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp CGCTCAAGGCCACCTGTAACTTCTCCAGCTCTAAGGGACCCAGACCCAACAAGCCATACAGCACACTGTTaGTTTGTAAAGACAAGATTA +
Preference number: 2 (lower is better)
Translates to: RSRPPVTSPALRDPDPTSHTAHC*FVKTRL
Trigger: TAATCTTGTCTTTACAAACCAACAGTGTGCTGTATG...GCTTGTTGGGTCTGGGTCCCTTAGAGCTGGAGAAGTTACAGGTGGCCTTGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp GTGGCCCAGGAAAGCAGAGAGAGAGTGAATATGCTATACCACAGCAGGCAAATACCAAAGAGCTTTGACTaGGACCAAAGACTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: VAQESRERVNMLYHSRQIPKSFD*DQRLLW
Trigger: CCACAGAAGTCTTTGGTCCCAGTCAAAGCTCTTTGG...TATTTGCCTGCTGTGGTATAGCATATTCACTCTCTCTCTGCTTTCCTGGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 90 bp GGGACAGGTTATGCTCGCCTCCTCAGCCATGCCTTCTGTGTTCTGTaGTTCTTTCTTTTCATTAGAACATGTACACTTGAAGCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: GTGYARLLSHAFCVL*FFLFIRTCTLEAAS
Trigger: GCTTGCAGCTTCAAGTGTACATGTTCTAATGAAAAGAAAGAACAACAGAACACAGAAGGCATGGCTGAGGAGGCGAGCATAACCTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp GTCCGAATCATAATTTTTAAATTGTACATAGCTCTGAGTCCTGCTCAGGACATGGAGGTAGGGAGGATCTaGGAGGAGTTGGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: VRIIIFKLYIALSPAQDMEVGRI*EELEKG
Trigger: TCCCTTCTCCAACTCCTCTCAGATCCTCCCTACCTC...CATGTCCTGAGCAGGACTCAGAGCTATGTACAATTTAAAAATTATGATTCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR TCA 90 bp ATTAGACTCAGTAAAATCACTGTCCATGGTACTCATGGCAGGCGGCGCCTCTCAGACACGAGTGAGCACTaGGATTCTCTGTTTAAAATA +
Preference number: 2 (lower is better)
Translates to: IRLSKITVHGTHGRRRLSDTSEH*DSLFKI
Trigger: TATTTTAAACAGAGAATCTCAGTGCTCACTCGTGTC...TGAGAGGCGCCGCCTGCCATGAGTACCATGGACAGTGATTTTACTGAGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR GCA 90 bp GCTATTGAAATGTGGCATGTATCATCTGAGCCAAAGACAGAACAATCGAGCTCACCACTAACAAGGATTTaGATGCATGAGAGGCGCCCA +
Preference number: 2 (lower is better)
Translates to: AIEMWHVSSEPKTEQSSSPLTRI*MHERRP
Trigger: TGGGCGCCTCTCATGCATGCAAATCCTTGTTAGTGG...TGAGCTCGATTGTTCTGTCTTTGGCTCAGATGATACATGCCACATTTCAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp TGGTTCCTGGGATTTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACGCACTCATGCAATTTTaGCTGTTATGTAGGAAACAA +
Preference number: 2 (lower is better)
Translates to: WFLGFELWTFGRAVGCSYALMQF*LLCRKQ
Trigger: TTGTTTCCTACATAACAGCCAAAATTGCATGAGTGC...GTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR GCA 90 bp AAAGTCACAGAAGGAGGGTGTTTTGTTTTCAGTGAAGCAGTAAGAGGGAGGGACCACCGAGGTCATCTCTaGCAAACTTGCAATAAAACA +
Preference number: 2 (lower is better)
Translates to: KVTEGGCFVFSEAVRGRDHRGHL*QTCNKT
Trigger: TGTTTTATTGCAAGTTTGGCAGAGATGACCTCGGTG...GTCCCTCCCTCTTACTGCTTCACTGAAAACAAAACACCCTCCTTCTGTGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp AAAAGCCAAACAATATCCAAAGACCAGTGCACACAGGTAGTTCAAAATCACACAGTCAGGCATCTAAGCTaGATGCTTTCACAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: KSQTISKDQCTQVVQNHTVRHLS*MLSQGH
Trigger: GTGGCCCTGTGAAAGCATCCAGCTTAGATGCCTGAC...TGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATATTGTTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR TCA 90 bp AAAGTCACAGAAGGAGGGTGTTTTGTTTTCAGTGAAGCAGTAAGAGGGAGGGACGAGATGGGATATTTCTaGTGGTCTTATAATGACAGC +
Preference number: 2 (lower is better)
Translates to: KVTEGGCFVFSEAVRGRDEMGYF*WSYNDS
Trigger: GCTGTCATTATAAGACCATCAGAAATATCCCATCTC...GTCCCTCCCTCTTACTGCTTCACTGAAAACAAAACACCCTCCTTCTGTGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR TCA 90 bp AAAAGCCAAACAATATCCAAAGACCAGTGCACACAGGTAGTTCAAAATCACACATCCGGGTTGCAAAGATaGGCCTCTCCAAAGAGCTTT +
Preference number: 2 (lower is better)
Translates to: KSQTISKDQCTQVVQNHTSGLQR*ASPKSF
Trigger: AAAGCTCTTTGGAGAGGCTCATCTTTGCAACCCGGA...TGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATATTGTTTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR GCA 90 bp AAAGTCACAGAAGGAGGGTGTTTTGTTTTCAGTGAAGCAGTAAGAGGGAGGGACTGGGCATATAAAAGCTaGCTGTGCTTGTATGACTAT +
Preference number: 2 (lower is better)
Translates to: KVTEGGCFVFSEAVRGRDWAYKS*LCLYDY
Trigger: ATAGTCATACAAGCACAGGCAGCTTTTATATGCCCA...GTCCCTCCCTCTTACTGCTTCACTGAAAACAAAACACCCTCCTTCTGTGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp GTCCGAATCATAATTTTTAAATTGTACATAGCTCTGAGTCCTGCTCAGGACATGATTCATGGGGCTGAATaGCTTCCCAGAATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VRIIIFKLYIALSPAQDMIHGAE*LPRMPC
Trigger: ACAGGGCATTCTGGGAAGCCATTCAGCCCCATGAAT...CATGTCCTGAGCAGGACTCAGAGCTATGTACAATTTAAAAATTATGATTCGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp GTCCGAATCATAATTTTTAAATTGTACATAGCTCTGAGTCCTGCTCAGGACATGGAGAAAGAAAAGGTGTaGATTTGGGTGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: VRIIIFKLYIALSPAQDMEKEKV*IWVGGE
Trigger: CTCCCCACCCACCCAAATCCACACCTTTTCTTTCTC...CATGTCCTGAGCAGGACTCAGAGCTATGTACAATTTAAAAATTATGATTCGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp ATTCATGTGTGTGTGTGTGTTGTTAACTGTTTTCTAATGGGAGGGAGAAAGAAAAAAGAGGGTCCAGGCTaGAGAGATGACTCAACGGTT +
Preference number: 2 (lower is better)
Translates to: IHVCVCVVNCFLMGGRKKKEGPG*RDDSTV
Trigger: AACCGTTGAGTCATCTCTCCAGCCTGGACCCTCTTT...TTTCTTTCTCCCTCCCATTAGAAAACAGTTAACAACACACACACACACATGAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR GCA 90 bp GCTATTGAAATGTGGCATGTATCATCTGAGCCAAAGACAGAACAATCGAGCTCATTGTCCATTCACAACTaGAAACAGCAAAAGACCTAC +
Preference number: 2 (lower is better)
Translates to: AIEMWHVSSEPKTEQSSSLSIHN*KQQKTY
Trigger: GTAGGTCTTTTGCTGTTTGCAGTTGTGAATGGACAA...TGAGCTCGATTGTTCTGTCTTTGGCTCAGATGATACATGCCACATTTCAATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CCA 90 bp GCTATTGAAATGTGGCATGTATCATCTGAGCCAAAGACAGAACAATCGAGCTCAATACTCTGCCAGGTGTaGATTACAAACACAGTAGTT +
Preference number: 2 (lower is better)
Translates to: AIEMWHVSSEPKTEQSSSILCQV*ITNTVV
Trigger: AACTACTGTGTTTGTAATCCACACCTGGCAGAGTAT...TGAGCTCGATTGTTCTGTCTTTGGCTCAGATGATACATGCCACATTTCAATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 90 bp TTCAACAAACAAGCTAACTCCCCTGTCCGAATCATAATTTTTAAATaGTACATAGCTCTGAGTCCTGCTCAGGACATGAACTCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: FNKQANSPVRIIIFK*YIALSPAQDMNSLC
Trigger: ACAAAGAGAGTTCATGTCCTGAGCAGGACTCAGAGCTATGTACAATTTAAAAATTATGATTCGGACAGGGGAGTTAGCTTGTTTGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 72 bp TCGGTGCCTGTGGGGTCCTGTTCAGAGCAAAGTAGGTaGCCGCCATGGCGCCCTTGCTGGGGGCTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: SVPVGSCSEQSR*PPWRPCWGLLE
Trigger: TTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACCCCACAGGCACCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp GACCTGTGTCTGGCGTCTGTGAGGCTGAGAGGACGTTaGGCAGGGCGACTGAGGCTGGAGACTTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: DLCLASVRLRGR*AGRLRLETWLA
Trigger: GGCCAGCCAAGTCTCCAGCCTCAGTCGCCCTGCCCAACGTCCTCTCAGCCTCACAGACGCCAGACACAGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp TCAGAGCAAAGTAGGTGGCCGCCATGGCGCCCTTGCTaGGGGCTGCTGGAAGAGACTGGTCCTGCATGCTGG +
Preference number: 3 (lower is better)
Translates to: SEQSRWPPWRPC*GLLEETGPACW
Trigger: CCAGCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp GTGGGGTCCTGTTCAGAGCAAAGTAGGTGGCCGCCATaGCGCCCTTGCTGGGGGCTGCTGGAAGAGACTGGT +
Preference number: 3 (lower is better)
Translates to: VGSCSEQSRWPP*RPCWGLLEETG
Trigger: ACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp CCCTCGGAGGGTGCCAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCTGTCACGCCGCCATGGCGCCCTaGCTGGGGGCTGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: PSEGARAPVHFPEDRICHAAMAP*LGAAGR
Trigger: TCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGC...GTGACAGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTGGCACCCTCCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp AAAGTAGGTGGCCGCCATGGCGCCCTTGCTGGGGGCTaGTGGAAGAGACTGGTCCTGCATGCTGGGTCTAGA +
Preference number: 3 (lower is better)
Translates to: KVGGRHGALAGG*WKRLVLHAGSR
Trigger: TCTAGACCCAGCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp TGTTCAGAGCAAAGTAGGTGGCCGCCATGGCGCCCTTaGTGGGGGCTGCTGGAAGAGACTGGTCCTGCATGC +
Preference number: 3 (lower is better)
Translates to: CSEQSRWPPWRP*WGLLEETGPAC
Trigger: GCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp AGACGAGCCATGCTGGCTTCCCCTTCCACCTGTCCCTaGCACAGAGGGACCCCAGAGACCTTTCCCACTCCA +
Preference number: 3 (lower is better)
Translates to: RRAMLASPSTCP*HRGTPETFPTP
Trigger: TGGAGTGGGAAAGGTCTCTGGGGTCCCTCTGTGGCAGGGACAGGTGGAAGGGGAAGCCAGCATGGCTCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp GCCACAGGGTTAAGGGGGCAGCAGTGTAGTGGGTACTaGCTCTGCCCGGCAATTTCCTGGGGCTCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: ATGLRGQQCSGY*LCPAISWGSCL
Trigger: GAGACAGGAGCCCCAGGAAATTGCCGGGCAGAGCCAGTACCCACTACACTGCTGCCCCCTTAACCCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp AGGACACACAAGTCCCTCCTCTCCGACCAGGAGGAGTaGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTA +
Preference number: 3 (lower is better)
Translates to: RTHKSLLSDQEE*STPRGKGLTRL
Trigger: TAACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAGGAGGGACTTGTGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp CTGTGGCCAACAGGCGCCTCCTACAGGTGCCTCTACTaGGCAGAGGGGCTGCTTCTCAGACTGGCAGGTTCT +
Preference number: 3 (lower is better)
Translates to: LWPTGASYRCLY*AEGLLLRLAGS
Trigger: AGAACCTGCCAGTCTGAGAAGCAGCCCCTCTGCCCAGTAGAGGCACCTGTAGGAGGCGCCTGTTGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp GCCATGGCGCCCTTGCTGGGGGCTGCTGGAAGAGACTaGTCCTGCATGCTGGGTCTAGATTTGGTAAGTCCG +
Preference number: 3 (lower is better)
Translates to: AMAPLLGAAGRD*SCMLGLDLVSP
Trigger: CGGACTTACCAAATCTAGACCCAGCATGCAGGACCAGTCTCTTCCAGCAGCCCCCAGCAAGGGCGCCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp CCTCTCCGACCAGGAGGAGTGGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTCTGTGGTATTGGAGGTaGGGTCTGCAAGCCTTTTTC +
Preference number: 3 (lower is better)
Translates to: PLRPGGVEHATGEGSHSVLWYWR*GLQAFF
Trigger: GAAAAAGGCTTGCAGACCCAACCTCCAATACCACAG...AACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp TGGTCCACCTGTGGTCTTCCTAGTGTAAGCCTGCTGTaGCCAACAGGCGCCTCCTACAGGTGCCTCTACTGG +
Preference number: 3 (lower is better)
Translates to: WSTCGLPSVSLL*PTGASYRCLYW
Trigger: CCAGTAGAGGCACCTGTAGGAGGCGCCTGTTGGCCACAGCAGGCTTACACTAGGAAGACCACAGGTGGACCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp CATTCACTGAGAAAGCAGGAGACCATCCCCAGGGACACTGGAAATGGCACACAGTCCGAAGCAGAGCTGTaGGTGGCCCAGCAGGGCGAT +
Preference number: 3 (lower is better)
Translates to: HSLRKQETIPRDTGNGTQSEAEL*VAQQGD
Trigger: ATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGGA...CTGTGTGCCATTTCCAGTGTCCCTGGGGATGGTCTCCTGCTTTCTCAGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp AACATTCCACTGGGGCAGGCATTGCAGAAGCAGCCGTaGTCCACCTGTGGTCTTCCTAGTGTAAGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: NIPLGQALQKQP*STCGLPSVSLL
Trigger: CAGCAGGCTTACACTAGGAAGACCACAGGTGGACCACGGCTGCTTCTGCAATGCCTGCCCCAGTGGAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp CCTACTGACCTCACTCAGAAACCCATTTGCCGCTACTaGGAAAGGTGCCACCACACCCAGGGTCCAGTTCTC +
Preference number: 3 (lower is better)
Translates to: PTDLTQKPICRY*ERCHHTQGPVL
Trigger: GAGAACTGGACCCTGGGTGTGGTGGCACCTTTCTCAGTAGCGGCAAATGGGTTTCTGAGTGAGGTCAGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp GTCCGAAGCAGAGCTGTTGGTGGCCCAGCAGGGCGATaGAGTCAGCTCATGTCAGCAGTAATGACAGTCACA +
Preference number: 3 (lower is better)
Translates to: VRSRAVGGPAGR*SQLMSAVMTVT
Trigger: TGTGACTGTCATTACTGCTGACATGAGCTGACTTCATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp CTGGGAGATGATCTCAGCCTTGGGCAGAGCATTCACTaGGAAAGCAGGAGACCATCCCCAGGGACACTGGAA +
Preference number: 3 (lower is better)
Translates to: LGDDLSLGQSIH*ESRRPSPGTLE
Trigger: TTCCAGTGTCCCTGGGGATGGTCTCCTGCTTTCTCAGTGAATGCTCTGCCCAAGGCTGAGATCATCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp GGAATGTGGGGTACTCCACTCTCTGCAGGGCAAGGCTaGGCATCCTTCCAGACACATCCAGAGGATGCGTTT +
Preference number: 3 (lower is better)
Translates to: GMWGTPLSAGQG*ASFQTHPEDAF
Trigger: AAACGCATCCTCTGGATGTGTCTGGAAGGATGCTCAGCCTTGCCCTGCAGAGAGTGGAGTACCCCACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp GTGATGCGGCCACATGACCATGAAGGGGACAGGTTATaGTCGCCTCCTCAGCCATGCCTTCTGTGTTCTGTT +
Preference number: 3 (lower is better)
Translates to: VMRPHDHEGDRL*SPPQPCLLCSV
Trigger: AACAGAACACAGAAGGCATGGCTGAGGAGGCGAGCATAACCTGTCCCCTTCATGGTCATGTGGCCGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp CTGGGTCTAGATTTGGTAAGTCCGAAGCAGAGCTGTTaGTGGCCCAGCAGGGCGATGAAGTCAGCTCATGTC +
Preference number: 3 (lower is better)
Translates to: LGLDLVSPKQSC*WPSRAMKSAHV
Trigger: GACATGAGCTGACTTCATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGGACTTACCAAATCTAGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp CAGTGTAGTGGGTACTGGCTCTGCCCGGCAATTTCCTaGGGCTCCTGTCTCAACCAACAGAAATCACGCTCT +
Preference number: 3 (lower is better)
Translates to: QCSGYWLCPAIS*GSCLNQQKSRS
Trigger: AGAGCGTGATTTCTGTTGGTTGAGACAGGAGCCCCAGGAAATTGCCGGGCAGAGCCAGTACCCACTACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp ATGGCTCAGCGGGCAAGTGCTTATTGCTCTCACAGATaGTCCAAGTCCCCGCTCAAGGCCACCTGTAACTTC +
Preference number: 3 (lower is better)
Translates to: MAQRASAYCSHR*SKSPLKATCNF
Trigger: GAAGTTACAGGTGGCCTTGAGCGGGGACTTGGATCATCTGTGAGAGCAATAAGCACTTGCCCGCTGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp GGACCTTCGGAAGAGCAGTGGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCTCAAACTCACTTCTTTA +
Preference number: 3 (lower is better)
Translates to: GPSEEQWGALTH*AISPALKLTSL
Trigger: TAAAGAAGTGAGTTTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCCACTGCTCTTCCGAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp TGGATGGTTGTGAGCCACCATGTGGTTCCTGGGATTTaGACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTC +
Preference number: 3 (lower is better)
Translates to: WMVVSHHVVPGI*TLDLRKSSGVL
Trigger: GAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCACATGGTGGCTCACAACCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp GGATTTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCAA +
Preference number: 3 (lower is better)
Translates to: GFELWTFGRAVG*SYPLSHLTSPQ
Trigger: TTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp TTCGAAAGTGGCTCTGCTGTCTCCAGGCAGGGACTGTaGACTAACACTCTCAGAGAGACAGTGGGACACGTA +
Preference number: 3 (lower is better)
Translates to: FESGSAVSRQGL*TNTLRETVGHV
Trigger: TACGTGTCCCACTGTCTCTCTGAGAGTGTTAGTGCACAGTCCCTGCCTGGAGACAGCAGAGCCACTTTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp TTGCTTGAGAGCAGGAGGGTGGTGAGAGGCACTCTTTaGGTGATTGTGGACAGAGTCAGGCATCTAAGCTGG +
Preference number: 3 (lower is better)
Translates to: LLESRRVVRGTL*VIVDRVRHLSW
Trigger: CCAGCTTAGATGCCTGACTCTGTCCACAATCACCCAAAGAGTGCCTCTCACCACCCTCCTGCTCTCAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp TCAGCAGTAATGACAGTCACAGATCCTGGGAGGGACTaGAGATTCCTCCCTAACCACTGGCCAAGGCCAATG +
Preference number: 3 (lower is better)
Translates to: SAVMTVTDPGRD*RFLPNHWPRPM
Trigger: CATTGGCCTTGGCCAGTGGTTAGGGAGGAATCTTCAGTCCCTCCCAGGATCTGTGACTGTCATTACTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp TTTCCCACTCCAGGTGTCTCACAGTCTTGCGGGTGGTaGAGGGCAGCAAAATGTGCCAGAGAGAATGAAGAG +
Preference number: 3 (lower is better)
Translates to: FPTPGVSQSCGW*RAAKCARENEE
Trigger: CTCTTCATTCTCTCTGGCACATTTTGCTGCCCTTCACCACCCGCAAGACTGTGAGACACCTGGAGTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp CCAGTTCTCCAGAGATATACAATTCATGGGGCTGAATaGCTTCCCAGAATGCCCTGTGGCCTAGTGCCCATG +
Preference number: 3 (lower is better)
Translates to: PVLQRYTIHGAE*LPRMPCGLVPM
Trigger: CATGGGCACTAGGCCACAGGGCATTCTGGGAAGCCATTCAGCCCCATGAATTGTATATCTCTGGAGAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 72 bp CTTTGGGTGATTGTGGACAGAGTCAGGCATCTAAGCTaGATGCTTTCACAGGGCCACTGGCATTGCCAGAAC +
Preference number: 3 (lower is better)
Translates to: LWVIVDRVRHLS*MLSQGHWHCQN
Trigger: GTTCTGGCAATGCCAGTGGCCCTGTGAAAGCATCCAGCTTAGATGCCTGACTCTGTCCACAATCACCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp ATCATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTaGGATAGCCCAAAAGTAGCTCTGGGGATGGGTAAA +
Preference number: 3 (lower is better)
Translates to: IMFSAQTGQELQ*DSPKVALGMGK
Trigger: TTTACCCATCCCCAGAGCTACTTTTGGGCTATCCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCACTCTGCCTGAGCTATaGAAATGTGGCATGTATCAT +
Preference number: 3 (lower is better)
Translates to: KREGPGTPPADVRTLSDSTLPEL*KCGMYH
Trigger: ATGATACATGCCACATTTCAATAGCTCAGGCAGAGT...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CAA 90 bp TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGTTAGACAACAGAAACACAAGAACTGAGGCTGGAGACTaGGCTGGCCACTACAACCTG +
Preference number: 3 (lower is better)
Translates to: CSLRRLQPENRLDNRNTRTEAGD*AGHYNL
Trigger: CAGGTTGTAGTGGCCAGCCAAGTCTCCAGCCTCAGT...TCTTGTGTTTCTGTTGTCTAACCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp GGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTaGGTTCCAGGACTGCCAGGGATACACAATGAAACC +
Preference number: 3 (lower is better)
Translates to: GFLSSRPAWSTK*VPGLPGIHNET
Trigger: GGTTTCATTGTGTATCCCTGGCAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp ACTCTTGGGTTGGTTGCTTTCATCCTGCCAAGTCAGTaGCAGAGTCAGGGAGAAGCTACCCAGCATCTTGCT +
Preference number: 3 (lower is better)
Translates to: TLGLVAFILPSQ*QSQGEATQHLA
Trigger: AGCAAGATGCTGGGTAGCTTCTCCCTGACTCTGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp CATCCTTCCAGACACATCCAGAGGATGCGTTTGGTTTaGCTGATGGTCTCCTCCATCCCTTTGGCGAGAGTA +
Preference number: 3 (lower is better)
Translates to: HPSRHIQRMRLV*LMVSSIPLARV
Trigger: TACTCTCGCCAAAGGGATGGAGGAGACCATCAGTCAAACCAAACGCATCCTCTGGATGTGTCTGGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp TACCCATCTAGACTCTTGGGTTGGTTGCTTTCATCCTaGCAAGTCAGTGACAGAGTCAGGGAGAAGCTACCC +
Preference number: 3 (lower is better)
Translates to: YPSRLLGWLLSS*QVSDRVREKLP
Trigger: GGGTAGCTTCTCCCTGACTCTGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp AACACCGGGGACACGGGGTTACATGCCACAGCAGACTaGTGTGGCACTGAAGACTTTAAAGAACAGGGATTA +
Preference number: 3 (lower is better)
Translates to: NTGDTGLHATAD*CGTEDFKEQGL
Trigger: TAATCCCTGTTCTTTAAAGTCTTCAGTGCCACAGCAGTCTGCTGTGGCATGTAACCCCGTGTCCCCGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp GTCAGGCATCTAAGCTGGATGCTTTCACAGGGCCACTaGCATTGCCAGAACATCCAGAAACATCCAGCTCTT +
Preference number: 3 (lower is better)
Translates to: VRHLSWMLSQGH*HCQNIQKHPAL
Trigger: AAGAGCTGGATGTTTCTGGATGTTCTGGCAATGCCAGTGGCCCTGTGAAAGCATCCAGCTTAGATGCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp GTCCGGGTTGCAAAGATGAGCCTCTCCAAAGAGCTTTaGCTGGGACCAAAGACTTCTGTGGTATTGGAGGTT +
Preference number: 3 (lower is better)
Translates to: VRVAKMSLSKEL*LGPKTSVVLEV
Trigger: AACCTCCAATACCACAGAAGTCTTTGGTCCCAGTCAAAGCTCTTTGGAGAGGCTCATCTTTGCAACCCGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp TCCAAAGGCTTTTTCCTAGGGTCCGGGTTGCAAAGATaGGCCTCTCCAAAGAGCTTTGACTGGGACCAAAGA +
Preference number: 3 (lower is better)
Translates to: SKGFFLGSGLQR*ASPKSFDWDQR
Trigger: TCTTTGGTCCCAGTCAAAGCTCTTTGGAGAGGCTCATCTTTGCAACCCGGACCCTAGGAAAAAGCCTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp GAGAATGAAGAGTCACGGTGTATCTCCTCCTATGCTTaGGAGAAGCGGTACAATGCAGGGGAAATCCCAACG +
Preference number: 3 (lower is better)
Translates to: ENEESRCISSYA*EKRYNAGEIPT
Trigger: CGTTGGGATTTCCCCTGCATTGTACCGCTTCTCTCAAGCATAGGAGGAGATACACCGTGACTCTTCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp CATCTAAGCTGGATGCTTTCACAGGGCCACTGGCATTaGCAGAACATCCAGAAACATCCAGCTCTTCGAAAG +
Preference number: 3 (lower is better)
Translates to: HLSWMLSQGHWH*QNIQKHPALRK
Trigger: CTTTCGAAGAGCTGGATGTTTCTGGATGTTCTGGCAATGCCAGTGGCCCTGTGAAAGCATCCAGCTTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGTTAGACAACAGAAACACAAGACCTCTCCAAAGAGCTTaGACTGGGACCAAAGACTTC +
Preference number: 3 (lower is better)
Translates to: CSLRRLQPENRLDNRNTRPLQRA*TGTKDF
Trigger: GAAGTCTTTGGTCCCAGTCAAAGCTCTTTGGAGAGG...TCTTGTGTTTCTGTTGTCTAACCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp GGTACTATCCCTGGCTTTAGGCTTCCATTGAATGAATaGATCCTTAATGAATCCCGACCAACCAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: GTIPGFRLPLNE*ILNESRPTREA
Trigger: GGCCTCCCTGGTTGGTCGGGATTCATTAAGGATTCATTCATTCAATGGAAGCCTAAAGCCAGGGATAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp CCAGAAGAGGGAGTCAAATCTTGTTGTGGATGGTTGTaGGCCACCATGTGGTTCCTGGGATTTGAACTTTGG +
Preference number: 3 (lower is better)
Translates to: PEEGVKSCCGWL*ATMWFLGFELW
Trigger: CCAAAGTTCAAATCCCAGGAACCACATGGTGGCTCACAACCATCCACAACAAGATTTGACTCCCTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp GGCTGGAGAGATGACTCAACGGTTAAAAGCACTGACTaGTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAA +
Preference number: 3 (lower is better)
Translates to: GWRDDSTVKSTD*SSKGPEFNSQQ
Trigger: TTGCTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTTTTAACCGTTGAGTCATCTCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp TCCTGGAATCCACATGATCAAAGGAGAACTGCTTCCTaGAAGTTGTCCTCTAACTCCAACATGTGCCATGGC +
Preference number: 3 (lower is better)
Translates to: SWNPHDQRRTAS*KLSSNSNMCHG
Trigger: GCCATGGCACATGTTGGAGTTAGAGGACAACTTGCAGGAAGCAGTTCTCCTTTGATCATGTGGATTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp CAAATAGACTCTACCCATCTAGACTCTTGGGTTGGTTaGTTTCATCCTGCCAAGTCAGTGACAGAGTCAGGG +
Preference number: 3 (lower is better)
Translates to: QIDSTHLDSWVG*FHPAKSVTESG
Trigger: CCCTGACTCTGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTAGAGTCTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR GCA 72 bp GTGTATCTCCTCCTATGCTTGAGAGAAGCGGTACAATaGAGGGGAAATCCCAACGGGCATCTTAAGGAAGAA +
Preference number: 3 (lower is better)
Translates to: VYLLLCLREAVQ*RGNPNGHLKEE
Trigger: TTCTTCCTTAAGATGCCCGTTGGGATTTCCCCTGCATTGTACCGCTTCTCTCAAGCATAGGAGGAGATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp TTGACTGGGACCAAAGACTTCTGTGGTATTGGAGGTTaGGTCTGCAAGCCTTTTTCTCCCTTTCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: LTGTKDFCGIGG*VCKPFSPFLST
Trigger: TGTGGAGAGAAAGGGAGAAAAAGGCTTGCAGACCCAACCTCCAATACCACAGAAGTCTTTGGTCCCAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp TCTCCAAAGAGCTTTGACTGGGACCAAAGACTTCTGTaGTATTGGAGGTTGGGTCTGCAAGCCTTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: SPKSFDWDQRLL*YWRLGLQAFFS
Trigger: GGAGAAAAAGGCTTGCAGACCCAACCTCCAATACCACAGAAGTCTTTGGTCCCAGTCAAAGCTCTTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp TCAAGAATCGGAAGGATTCAGGCCCAGAACATTAACTaGGAGATGATCTCAGCCTTGGGCAGAGCATTCACT +
Preference number: 3 (lower is better)
Translates to: SRIGRIQAQNIN*EMISALGRAFT
Trigger: AGTGAATGCTCTGCCCAAGGCTGAGATCATCTCCCAGTTAATGTTCTGGGCCTGAATCCTTCCGATTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp TGGTTCCTGGGATTTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACCCTACTTTGTCCATCTaGAACACATTCATACAGCAC +
Preference number: 3 (lower is better)
Translates to: WFLGFELWTFGRAVGCSYPTLSI*NTFIQH
Trigger: GTGCTGTATGAATGTGTTCAAGATGGACAAAGTAGG...GTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CAA 90 bp TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGTTAGACAACAGAAACACAAGATACCCATCTAGACTCTaGGGTTGGTTGCTTTCATCC +
Preference number: 3 (lower is better)
Translates to: CSLRRLQPENRLDNRNTRYPSRL*GWLLSS
Trigger: GGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTA...TCTTGTGTTTCTGTTGTCTAACCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp GTCCGAATCATAATTTTTAAATTGTACATAGCTCTGAGTCCTGCTCAGGACATGGTAGAGCCCAGGGCCTaGCATAAGACAGGCAAGGCT +
Preference number: 3 (lower is better)
Translates to: VRIIIFKLYIALSPAQDMVEPRA*HKTGKA
Trigger: AGCCTTGCCTGTCTTATGCAAGGCCCTGGGCTCTAC...CATGTCCTGAGCAGGACTCAGAGCTATGTACAATTTAAAAATTATGATTCGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CAA 90 bp ATTAGACTCAGTAAAATCACTGTCCATGGTACTCATGGCAGGCGGCGCCTCTCAAAGGGCAGCCTTCTATaGAATAACAATACAAAGGCC +
Preference number: 3 (lower is better)
Translates to: IRLSKITVHGTHGRRRLSKGSLL*NNNTKA
Trigger: GGCCTTTGTATTGTTATTCAATAGAAGGCTGCCCTT...TGAGAGGCGCCGCCTGCCATGAGTACCATGGACAGTGATTTTACTGAGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 72 bp TCACGCTCTCAAATAGACTCTACCCATCTAGACTCTTaGGTTGGTTGCTTTCATCCTGCCAAGTCAGTGACA +
Preference number: 3 (lower is better)
Translates to: SRSQIDSTHLDS*VGCFHPAKSVT
Trigger: TGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTAGAGTCTATTTGAGAGCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR-3UTR CAA 90 bp TGGTTCCTGGGATTTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACACACTGTCAGACTCCTaGTCTCATATTTATTTTCTC +
Preference number: 3 (lower is better)
Translates to: WFLGFELWTFGRAVGCSYTLSDS*SHIYFL
Trigger: GAGAAAATAAATATGAGACAAGGAGTCTGACAGTGT...GTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp ATCAGACTACCTGCCCACAAATCTCTGCTACACAACTaGCTAGCTGTATTCCCTCACACTAGTCATCTACTC +
Preference number: 3 (lower is better)
Translates to: IRLPAHKSLLHN*LAVFPHTSHLL
Trigger: GAGTAGATGACTAGTGTGAGGGAATACAGCTAGTCAGTTGTGTAGCAGAGATTTGTGGGCAGGTAGTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp AGTCTCATCAGCTTACCGCTAAGCCTGCCCTGTATATaGAATTCCCTCCTCTTTTGGAACAGCTCACATTCA +
Preference number: 3 (lower is better)
Translates to: SLISLPLSLPCI*NSLLFWNSSHS
Trigger: TGAATGTGAGCTGTTCCAAAAGAGGAGGGAATTTCATATACAGGGCAGGCTTAGCGGTAAGCTGATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CAA 90 bp TGGATTACAAACACAGTAGTTAATAGGCAAATGTCATCAGACTACCTGCCCACAGCGGGCAAGTGCTTATaGCTCTCACAGATGATCCAA +
Preference number: 3 (lower is better)
Translates to: WITNTVVNRQMSSDYLPTAGKCL*LSQMIQ
Trigger: TTGGATCATCTGTGAGAGCAATAAGCACTTGCCCGC...TGTGGGCAGGTAGTCTGATGACATTTGCCTATTAACTACTGTGTTTGTAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR-3UTR CAA 90 bp ATTAGACTCAGTAAAATCACTGTCCATGGTACTCATGGCAGGCGGCGCCTCTCAAAAAGCTGCCTGTGCTaGTATGACTATCTTTTTATC +
Preference number: 3 (lower is better)
Translates to: IRLSKITVHGTHGRRRLSKSCLC*YDYLFI
Trigger: GATAAAAAGATAGTCATACAAGCACAGGCAGCTTTT...TGAGAGGCGCCGCCTGCCATGAGTACCATGGACAGTGATTTTACTGAGTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp GTGTCTCTAAAAACTAATGTTCTGAAGACACCCTACTaGCCTCACTCAGAAACCCATTTGCCGCTACTGAGA +
Preference number: 3 (lower is better)
Translates to: VSLKTNVLKTPY*PHSETHLPLLR
Trigger: TCTCAGTAGCGGCAAATGGGTTTCTGAGTGAGGTCAGTAGGGTGTCTTCAGAACATTAGTTTTTAGAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp GACATTAAGGATGACAGGAAGATGGTGAGACGAATGTaGAAAGGCAAATTCACTAAGGACCCCTGTGACAGA +
Preference number: 3 (lower is better)
Translates to: DIKDDRKMVRRM*KGKFTKDPCDR
Trigger: TCTGTCACAGGGGTCCTTAGTGAATTTGCCTTTTCACATTCGTCTCACCATCTTCCTGTCATCCTTAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp GAACAGGGATTAAAACGATCCTGTCACGTGCTCCTCTaGCTGACTCCACAAGAGATTTCAAGTATCAAGTAC +
Preference number: 3 (lower is better)
Translates to: EQGLKRSCHVLL*LTPQEISSIKY
Trigger: GTACTTGATACTTGAAATCTCTTGTGGAGTCAGTCAGAGGAGCACGTGACAGGATCGTTTTAATCCCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CCA 72 bp CATAAGTATCAGACTAACAGTGGGCCTCAGGAAGAGTaGAGCATTCTTACCAGAATAACCTGGATCAGTTTT +
Preference number: 3 (lower is better)
Translates to: HKYQTNSGPQEE*SILTRITWISF
Trigger: AAAACTGATCCAGGTTATTCTGGTAAGAATGCTCCACTCTTCCTGAGGCCCACTGTTAGTCTGATACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 72 bp AATCTGTCACTAAGACTACCCACTATACTTTCCCTCTaGATTTCTATCAAGAATCGGAAGGATTCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: NLSLRLPTILSL*ISIKNRKDSGP
Trigger: TGGGCCTGAATCCTTCCGATTCTTGATAGAAATCCAGAGGGAAAGTATAGTGGGTAGTCTTAGTGACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR TCA 72 bp AACATCACATGGACATTAAGGATGACAGGAAGATGGTaGGACGAATGTGAAAAGGCAAATTCACTAAGGACC +
Preference number: 3 (lower is better)
Translates to: NITWTLRMTGRW*DECEKANSLRT
Trigger: GGTCCTTAGTGAATTTGCCTTTTCACATTCGTCTCACCATCTTCCTGTCATCCTTAATGTCCATGTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp AGCAAATATGGCATAAAAATCACGTTAACTGCACCATaGACTCACCGAGGTCATCTCTGCCAAACTTGCAAT +
Preference number: 3 (lower is better)
Translates to: SKYGIKITLTAP*THRGHLCQTCN
Trigger: ATTGCAAGTTTGGCAGAGATGACCTCGGTGAGTTCATGGTGCAGTTAACGTGATTTTTATGCCATATTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp ATGTGTTTGGTACTATCCCTGGCTTTAGGCTTCCATTaGATGAATGAATCCTTAATGAATCCCGACCAACCA +
Preference number: 3 (lower is better)
Translates to: MCLVLSLALGFH*MNESLMNPDQP
Trigger: TGGTTGGTCGGGATTCATTAAGGATTCATTCATTCAATGGAAGCCTAAAGCCAGGGATAGTACCAAACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp TGTTATGTAGGAAACAAAGTAACTCCATACTCTGCCTaGGCTATTGAAATGTGGCATGTATCATCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: CYVGNKVTPYSA*AIEMWHVSSEP
Trigger: TGGCTCAGATGATACATGCCACATTTCAATAGCTCAGGCAGAGTATGGAGTTACTTTGTTTCCTACATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp ACACTGTTGGTTTGTAAAGACAAGATTAGCTGTTTTTaGATGTCTGCCTATAGAAAACCCAGAGGCACCATT +
Preference number: 3 (lower is better)
Translates to: TLLVCKDKISCF*MSAYRKPRGTI
Trigger: AATGGTGCCTCTGGGTTTTCTATAGGCAGACATGCAAAAACAGCTAATCTTGTCTTTACAAACCAACAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 72 bp AAAGTGTCGTTCACACATCCAGCACTCATGCAATTTTaGCTGTTATGTAGGAAACAAAGTAACTCCATACTC +
Preference number: 3 (lower is better)
Translates to: KVSFTHPALMQF*LLCRKQSNSIL
Trigger: GAGTATGGAGTTACTTTGTTTCCTACATAACAGCCAAAATTGCATGAGTGCTGGATGTGTGAACGACACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp AAAGCTACAAAGTGTCGTTCACACATCCAGCACTCATaGAATTTTGGCTGTTATGTAGGAAACAAAGTAACT +
Preference number: 3 (lower is better)
Translates to: KATKCRSHIQHS*NFGCYVGNKVT
Trigger: AGTTACTTTGTTTCCTACATAACAGCCAAAATTGCATGAGTGCTGGATGTGTGAACGACACTTTGTAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR GCA 72 bp AAAATAAAATCCTGCAAGAAACTCAGAAAGGCAGTATaGATTTCTTCAGACAGCATACCACTGGATACTTTG +
Preference number: 3 (lower is better)
Translates to: KIKSCKKLRKAV*ISSDSIPLDTL
Trigger: CAAAGTATCCAGTGGTATGCTGTCTGAAGAAATGCATACTGCCTTTCTGAGTTTCTTGCAGGATTTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR TCA 72 bp ATGCTGTCTACAACATTAAATATAACAAGGACCCAATaGGCCAAAGAAACGTATACACACTCAGGAATTAAC +
Preference number: 3 (lower is better)
Translates to: MLSTTLNITRTQ*AKETYTHSGIN
Trigger: GTTAATTCCTGAGTGTGTATACGTTTCTTTGGCTCATTGGGTCCTTGTTATATTTAATGTTGTAGACAGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CCA 72 bp TTTGTCCATCTTGAACACATTCATACAGCACACTGTTaGTTTGTAAAGACAAGATTAGCTGTTTTTGCATGT +
Preference number: 3 (lower is better)
Translates to: FVHLEHIHTAHC*FVKTRLAVFAC
Trigger: ACATGCAAAAACAGCTAATCTTGTCTTTACAAACCAACAGTGTGCTGTATGAATGTGTTCAAGATGGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR GCA 90 bp GGTCCTGTTCAGAGCAAAGTAGGTGGCCGCCATGGCGCCCTTGCTGGGGGCTGCAGGTCTGGGAGGCTGTaGTTGTGCCGGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GPVQSKVGGRHGALAGGCRSGRL*LCREPA
Trigger: CGCGGGCTCCCGGCACAAGCACAGCCTCCCAGACCT...GCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR TCA 90 bp CCTCTCCGACCAGGAGGAGTGGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTTCTCCTCGGTGGCGTTaGGATTGTTCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: PLRPGGVEHATGEGSHSVSPRWR*DCSRRP
Trigger: CGGCCTACGTGAACAATCTCAACGCCACCGAGGAGA...AACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR GCA 90 bp TCCGAAGCAGAGCTGTTGGTGGCCCAGCAGGGCGATGAAGTCAGCTCATGTCAGGCCTCCTGCCCGTGCTaGACGCCGCCCGACACAACA +
Preference number: 4 (lower is better)
Translates to: SEAELLVAQQGDEVSSCQASCPC*TPPDTT
Trigger: TGTTGTGTCGGGCGGCGTGCAGCACGGGCAGGAGGC...CTGACATGAGCTGACTTCATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR CCA 90 bp CCTCTCCGACCAGGAGGAGTGGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTGCGTGGTGCTTGCTGTaGTGCAGCTGCATGATCTGC +
Preference number: 4 (lower is better)
Translates to: PLRPGGVEHATGEGSHSVAWCLL*CSCMIC
Trigger: GCAGATCATGCAGCTGCACCACAGCAAGCACCACGC...AACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR TCA 90 bp GGCAGGGCGACTGAGGCTGGAGACTTGGCTGGCCACTACAACCTGGTAGACGTGAAGCCAGCCCCAGCCTaGACCTTGGACTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GRATEAGDLAGHYNLVDVKPAPA*TLDSHR
Trigger: TCTGTGGGAGTCCAAGGTTCAGGCTGGGGCTGGCTT...CACGTCTACCAGGTTGTAGTGGCCAGCCAAGTCTCCAGCCTCAGTCGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR TCA 90 bp AAGAGGGAGGGACCAGGGACTCCTCCAGCGGATGTCAGAACACTGTCAGACTCCAAGCCAGCCCCAGCCTaGACCTTGGACTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: KREGPGTPPADVRTLSDSKPAPA*TLDSHR
Trigger: TCTGTGGGAGTCCAAGGTTCAGGCTGGGGCTGGCTT...GGAGTCTGACAGTGTTCTGACATCCGCTGGAGGAGTCCCTGGTCCCTCCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CCA 90 bp TCCGAAGCAGAGCTGTTGGTGGCCCAGCAGGGCGATGAAGTCAGCTCATGTCAGGTCGTAAGGCAGGTCTaGGAGGCTGTGCTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: SEAELLVAQQGDEVSSCQVVRQV*EAVLVP
Trigger: CGGCACAAGCACAGCCTCCCAGACCTGCCTTACGAC...CTGACATGAGCTGACTTCATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR CCA 90 bp CGCTCAAGGCCACCTGTAACTTCTCCAGCTCTAAGGGACCCAGACCCAACAAGCTTGGCCAGAGCCTCGTaGTACTTCTCCTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RSRPPVTSPALRDPDPTSLARAS*YFSSVA
Trigger: CGCCACCGAGGAGAAGTACCACGAGGCTCTGGCCAA...GCTTGTTGGGTCTGGGTCCCTTAGAGCTGGAGAAGTTACAGGTGGCCTTGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CCA 90 bp GGTCCTGTTCAGAGCAAAGTAGGTGGCCGCCATGGCGCCCTTGCTGGGGGCTGCTGTTGTTCCTTGCAATaGGTCCTGATTAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPVQSKVGGRHGALAGGCCCSLQ*VLIRAG
Trigger: GCCTGCTCTAATCAGGACCCATTGCAAGGAACAACA...GCAGCCCCCAGCAAGGGCGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR GCA 90 bp ACAGTCAGAAGCACTGTGTCACCTTGTCAGGGAAAGGGCAGCCTTCTATTGAATAGGTCTGGGAGGCTGTaGTTGTGCCGGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: TVRSTVSPCQGKGSLLLNRSGRL*LCREPA
Trigger: CGCGGGCTCCCGGCACAAGCACAGCCTCCCAGACCT...ATTCAATAGAAGGCTGCCCTTTCCCTGACAAGGTGACACAGTGCTTCTGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR TCA 90 bp CAAGCACCCCATCCCCACCTCCTTCAGTGGAGCGCTCATCATGTTCTCAGCCCATATGTCCCCCACCATTaGACTTCAGTGCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QAPHPHLLQWSAHHVLSPYVPHH*TSVQAE
Trigger: TTCAGCCTGCACTGAAGTTCAATGGTGGGGGACATA...TGGGCTGAGAACATGATGAGCGCTCCACTGAAGGAGGTGGGGATGGGGTGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR GCA 90 bp AAAGGCAAATTCACTAAGGACCCCTGTGACAGATATCTCCACAGTGCACAGGAAGCCTCCTGCCCGTGCTaGACGCCGCCCGACACAACA +
Preference number: 4 (lower is better)
Translates to: KGKFTKDPCDRYLHSAQEASCPC*TPPDTT
Trigger: TGTTGTGTCGGGCGGCGTGCAGCACGGGCAGGAGGC...TTCCTGTGCACTGTGGAGATATCTGTCACAGGGGTCCTTAGTGAATTTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR GCA 90 bp ACAGAGGGACCCCAGAGACCTTTCCCACTCCAGGTGTCTCACAGTCTTGCGGGTTTGCTGTGGTGCAGCTaGATGATCTGCGCGTTAATG +
Preference number: 4 (lower is better)
Translates to: TEGPQRPFPLQVSHSLAGLLWCS*MICALM
Trigger: CATTAACGCGCAGATCATGCAGCTGCACCACAGCAA...ACCCGCAAGACTGTGAGACACCTGGAGTGGGAAAGGTCTCTGGGGTCCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 72 bp GCTGGGTCTAGATTTGGTAAGTCCGAAGCAGAGCTGTaGGTGGCCCAGCAGGGCGATGAAGTCAGCTCATGT +
Preference number: 4 (lower is better)
Translates to: AGSRFGKSEAEL*VAQQGDEVSSC
Trigger: ACATGAGCTGACTTCATCGCCCTGCTGGGCCACCAACAGCTCTGCTTCGGACTTACCAAATCTAGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 72 bp GTCAGTGACAGAGTCAGGGAGAAGCTACCCAGCATCTaGCTTGAGAGCAGGAGGGTGGTGAGAGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: VSDRVREKLPSI*LESRRVVRGTL
Trigger: AAGAGTGCCTCTCACCACCCTCCTGCTCTCAAGCAAGATGCTGGGTAGCTTCTCCCTGACTCTGTCACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR TCA 90 bp TGGTTCCTGGGATTTGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCTCTTACTCTCCTCGGTGGCGTTaGGATTGTTCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: WFLGFELWTFGRAVGCSYSPRWR*DCSRRP
Trigger: CGGCCTACGTGAACAATCTCAACGCCACCGAGGAGA...GTAAGAGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CCA 90 bp ATTAGACTCAGTAAAATCACTGTCCATGGTACTCATGGCAGGCGGCGCCTCTCAGTCGTAAGGCAGGTCTaGGAGGCTGTGCTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: IRLSKITVHGTHGRRRLSVVRQV*EAVLVP
Trigger: CGGCACAAGCACAGCCTCCCAGACCTGCCTTACGAC...TGAGAGGCGCCGCCTGCCATGAGTACCATGGACAGTGATTTTACTGAGTCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp GTGGATGGTTGTGAGCCACCATGTGGTTCCTGGGATTaGAACTTTGGACCTTCGGAAGAGCAGTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VDGCEPPCGSWD*NFGPSEEQWGA
Trigger: AGCACCCCACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGGAACCACATGGTGGCTCACAACCATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR TCA 90 bp CCCTCGGAGGGTGCCAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCTGTCACTTAGAAAGAGCAGAGTaGACACAGGCCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PSEGARAPVHFPEDRICHLERAE*TQACCS
Trigger: GGAACAACAGGCCTGTGTTCACTCTGCTCTTTCTAA...GTGACAGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTGGCACCCTCCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 72 bp ACTGGCCAAGGCCAATGTGGCTTCCTGGCTATCACCTaGGACAGCTTCCAGAATCACGACTTCCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TGQGQCGFLAIT*DSFQNHDFQRL
Trigger: AAGCCTTTGGAAGTCGTGATTCTGGAAGCTGTCCAAGGTGATAGCCAGGAAGCCACATTGGCCTTGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 72 bp GCATCCTTCCAGACACATCCAGAGGATGCGTTTGGTTaGACTGATGGTCTCCTCCATCCCTTTGGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: ASFQTHPEDAFG*TDGLLHPFGES
Trigger: ACTCTCGCCAAAGGGATGGAGGAGACCATCAGTCAAACCAAACGCATCCTCTGGATGTGTCTGGAAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR GCA 90 bp TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGTTAGACAACAGAAACACAAGATGGTGCTTGCTGTGGTaGAGCTGCATGATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: CSLRRLQPENRLDNRNTRWCLLW*SCMICA
Trigger: CGCGCAGATCATGCAGCTGCACCACAGCAAGCACCA...TCTTGTGTTTCTGTTGTCTAACCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR GCA 90 bp AAAGTCACAGAAGGAGGGTGTTTTGTTTTCAGTGAAGCAGTAAGAGGGAGGGACTGGTGCTTGCTGTGGTaGAGCTGCATGATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: KVTEGGCFVFSEAVRGRDWCLLW*SCMICA
Trigger: CGCGCAGATCATGCAGCTGCACCACAGCAAGCACCA...GTCCCTCCCTCTTACTGCTTCACTGAAAACAAAACACCCTCCTTCTGTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp GTCTTCAGACACTCCAGAAGAGGGAGTCAAATCTTGTaGTGGATGGTTGTGAGCCACCATGTGGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VFRHSRRGSQIL*WMVVSHHVVPG
Trigger: CCCAGGAACCACATGGTGGCTCACAACCATCCACAACAAGATTTGACTCCCTCTTCTGGAGTGTCTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp GGTCCGGGTTGCAAAGATGAGCCTCTCCAAAGAGCTTaGACTGGGACCAAAGACTTCTGTGGTATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GPGCKDEPLQRA*TGTKDFCGIGG
Trigger: ACCTCCAATACCACAGAAGTCTTTGGTCCCAGTCAAAGCTCTTTGGAGAGGCTCATCTTTGCAACCCGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 72 bp CAGGCCCAGAACATTAACTGGGAGATGATCTCAGCCTaGGGCAGAGCATTCACTGAGAAAGCAGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: QAQNINWEMISA*GRAFTEKAGDH
Trigger: ATGGTCTCCTGCTTTCTCAGTGAATGCTCTGCCCAAGGCTGAGATCATCTCCCAGTTAATGTTCTGGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR TCA 90 bp CGCTCAAGGCCACCTGTAACTTCTCCAGCTCTAAGGGACCCAGACCCAACAAGCTCAGATAGTCAGGTCTaGCGTTTTTATACTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RSRPPVTSPALRDPDPTSSDSQV*RFYTEG
Trigger: ACCTTCAGTATAAAAACGTCAGACCTGACTATCTGA...GCTTGTTGGGTCTGGGTCCCTTAGAGCTGGAGAAGTTACAGGTGGCCTTGAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CCA 90 bp TCAGGTATGTGGAAAGACATCAATAAAGACTACAGCACCCCAGTCATAGTGCTGGCGTGGTGCTTGCTGTaGTGCAGCTGCATGATCTGC +
Preference number: 4 (lower is better)
Translates to: SGMWKDINKDYSTPVIVLAWCLL*CSCMIC
Trigger: GCAGATCATGCAGCTGCACCACAGCAAGCACCACGC...CAGCACTATGACTGGGGTGCTGTAGTCTTTATTGATGTCTTTCCACATACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CCA 90 bp GCTATTGAAATGTGGCATGTATCATCTGAGCCAAAGACAGAACAATCGAGCTCACCCCAGCCTGAACCTTaGACTCCCACAGACACGGCT +
Preference number: 4 (lower is better)
Translates to: AIEMWHVSSEPKTEQSSSPQPEP*TPTDTA
Trigger: AGCCGTGTCTGTGGGAGTCCAAGGTTCAGGCTGGGG...TGAGCTCGATTGTTCTGTCTTTGGCTCAGATGATACATGCCACATTTCAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp GCTGTCTTCAGACACTCCAGAAGAGGGAGTCAAATCTaGTTGTGGATGGTTGTGAGCCACCATGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AVFRHSRRGSQI*LWMVVSHHVVP
Trigger: AGGAACCACATGGTGGCTCACAACCATCCACAACAAGATTTGACTCCCTCTTCTGGAGTGTCTGAAGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp GCATCTAAGCTGGATGCTTTCACAGGGCCACTGGCATaGCCAGAACATCCAGAAACATCCAGCTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: ASKLDAFTGPLA*PEHPETSSSSK
Trigger: TTTCGAAGAGCTGGATGTTTCTGGATGTTCTGGCAATGCCAGTGGCCCTGTGAAAGCATCCAGCTTAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR GCA 90 bp AAAGTCACAGAAGGAGGGTGTTTTGTTTTCAGTGAAGCAGTAAGAGGGAGGGACTGCAGCTGCATGATCTaGGCGTTAATGTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KVTEGGCFVFSEAVRGRDCSCMI*ALMCGS
Trigger: GGAGCCACACATTAACGCGCAGATCATGCAGCTGCA...GTCCCTCCCTCTTACTGCTTCACTGAAAACAAAACACCCTCCTTCTGTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp TTTGACTGGGACCAAAGACTTCTGTGGTATTGGAGGTaGGGTCTGCAAGCCTTTTTCTCCCTTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FDWDQRLLWYWR*GLQAFFSLSLH
Trigger: GTGGAGAGAAAGGGAGAAAAAGGCTTGCAGACCCAACCTCCAATACCACAGAAGTCTTTGGTCCCAGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR CCA 90 bp AAAAGCCAAACAATATCCAAAGACCAGTGCACACAGGTAGTTCAAAATCACACACCCCAGCCTGAACCTTaGACTCCCACAGACACGGCT +
Preference number: 4 (lower is better)
Translates to: KSQTISKDQCTQVVQNHTPQPEP*TPTDTA
Trigger: AGCCGTGTCTGTGGGAGTCCAAGGTTCAGGCTGGGG...TGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATATTGTTTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR GCA 90 bp TCAGGTATGTGGAAAGACATCAATAAAGACTACAGCACCCCAGTCATAGTGCTGTTGCTGTGGTGCAGCTaGATGATCTGCGCGTTAATG +
Preference number: 4 (lower is better)
Translates to: SGMWKDINKDYSTPVIVLLLWCS*MICALM
Trigger: CATTAACGCGCAGATCATGCAGCTGCACCACAGCAA...CAGCACTATGACTGGGGTGCTGTAGTCTTTATTGATGTCTTTCCACATACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp TCAAATAGACTCTACCCATCTAGACTCTTGGGTTGGTaGCTTTCATCCTGCCAAGTCAGTGACAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SNRLYPSRLLGW*LSSCQVSDRVR
Trigger: CCTGACTCTGTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTAGAGTCTATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
3UTR CAA 72 bp ATCACGCTCTCAAATAGACTCTACCCATCTAGACTCTaGGGTTGGTTGCTTTCATCCTGCCAAGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ITLSNRLYPSRL*GWLLSSCQVSD
Trigger: GTCACTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGGTAGAGTCTATTTGAGAGCGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR TCA 90 bp TCAGGTATGTGGAAAGACATCAATAAAGACTACAGCACCCCAGTCATAGTGCTGGTCCAGAAAATGGTGTaGTTAATATGTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SGMWKDINKDYSTPVIVLVQKMV*LICPPP
Trigger: TGGTGGGGGACATATTAATCACACCATTTTCTGGAC...CAGCACTATGACTGGGGTGCTGTAGTCTTTATTGATGTCTTTCCACATACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR TCA 90 bp AATGTTCAATCAAGAGCAATTCACACAGAGTATGCGCTGTTCTCAAATAGTTGCCCTTGCAATGGGTCCTaGTTAGAGCAGGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: NVQSRAIHTEYALFSNSCPCNGS*LEQAAI
Trigger: GATTGCTGCCTGCTCTAATCAGGACCCATTGCAAGG...GCAACTATTTGAGAACAGCGCATACTCTGTGTGAATTGCTCTTGATTGAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR TCA 90 bp AAAAGCCAAACAATATCCAAAGACCAGTGCACACAGGTAGTTCAAAATCACACACCTTGCAATGGGTCCTaGTTAGAGCAGGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KSQTISKDQCTQVVQNHTPCNGS*LEQAAI
Trigger: GATTGCTGCCTGCTCTAATCAGGACCCATTGCAAGG...TGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATATTGTTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR TCA 90 bp GTCCGAATCATAATTTTTAAATTGTACATAGCTCTGAGTCCTGCTCAGGACATGTATGTCCCCCACCATTaGACTTCAGTGCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VRIIIFKLYIALSPAQDMYVPHH*TSVQAE
Trigger: TTCAGCCTGCACTGAAGTTCAATGGTGGGGGACATA...CATGTCCTGAGCAGGACTCAGAGCTATGTACAATTTAAAAATTATGATTCGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp TCCCATGACAAATTCTGTAGCTACACAAGTAGTCATTaGTGTAGAGAATACAGAGCCTTTCCTCGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SHDKFCSYTSSH*CREYRAFPRVG
Trigger: CCCAACACGAGGAAAGGCTCTGTATTCTCTACACAAATGACTACTTGTGTAGCTACAGAATTTGTCATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR CCA 90 bp AATGTTCAATCAAGAGCAATTCACACAGAGTATGCGCTGTTCTCAAATAGTTGCTGTTGTTCCTTGCAATaGGTCCTGATTAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NVQSRAIHTEYALFSNSCCCSLQ*VLIRAG
Trigger: GCCTGCTCTAATCAGGACCCATTGCAAGGAACAACA...GCAACTATTTGAGAACAGCGCATACTCTGTGTGAATTGCTCTTGATTGAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp TCCCTCACACTAGTCATCTACTCTTACTCTACTTTCTaGTCCATTCACAACTGCAAACAGCAAAAGACCTAC +
Preference number: 4 (lower is better)
Translates to: SLTLVIYSYSTF*SIHNCKQQKTY
Trigger: GTAGGTCTTTTGCTGTTTGCAGTTGTGAATGGACAAGAAAGTAGAGTAAGAGTAGATGACTAGTGTGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
3UTR CAA 72 bp CATCTCACCAGCCCTCAAACTCACTTCTTTATGCTTTaGCAGCAGGTACTTACTTCAACAAACAAGCTAACT +
Preference number: 4 (lower is better)
Translates to: HLTSPQTHFFML*QQVLTSTNKLT
Trigger: AGTTAGCTTGTTTGTTGAAGTAAGTACCTGCTGCAAAAGCATAAAGAAGTGAGTTTGAGGGCTGGTGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS CCA 90 bp CGCGTTAATGTGTGGCTCCAGCGCGCCATAGTCGTAAGGCAGGTCTaGGAGGCTGTGCTTGTGCCGGGAGCCCGCGGCACCGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: RVNVWLQRAIVVRQV*EAVLVPGARGTGHR
Trigger: CCTGTGGCCGGTGCCGCGGGCTCCCGGCACAAGCACAGCCTCCCAGACCTGCCTTACGACTATGGCGCGCTGGAGCCACACATTAACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007012.6
ENSMUST00000232726.2
ENSMUST00000233451.2
CDS-3UTR CAA 90 bp CAAGCACCCCATCCCCACCTCCTTCAGTGGAGCGCTCATCATGTTCTCAGCCCATCTGGGAGGCTGTGCTaGTGCCGGGAGCCCGCGGCA +
Preference number: 5 (lower is better)
Translates to: QAPHPHLLQWSAHHVLSPSGRLC*CREPAA
Trigger: TGCCGCGGGCTCCCGGCACAAGCACAGCCTCCCAGA...TGGGCTGAGAACATGATGAGCGCTCCACTGAAGGAGGTGGGGATGGGGTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS-3UTR CAA 90 bp CCTCTCCGACCAGGAGGAGTGGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTTCCAGCAACTCTCCTTaGGGTTCTCCACCACCCTTA +
Preference number: 5 (lower is better)
Translates to: PLRPGGVEHATGEGSHSVSSNSP*GSPPPL
Trigger: TAAGGGTGGTGGAGAACCCAAAGGAGAGTTGCTGGA...AACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232726.2
CDS TCA 90 bp CATCTCCCTTGGCCAGAGCCTCGTGGTACTTCTCCTCGGTGGCGTTaGGATTGTTCACGTAGGCCGCGTGGTGCTTGCTGTGGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: HLPWPEPRGTSPRWR*DCSRRPRGACCGAA
Trigger: AGCTGCACCACAGCAAGCACCACGCGGCCTACGTGAACAATCTCAACGCCACCGAGGAGAAGTACCACGAGGCTCTGGCCAAGGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000007012.6
ENSMUST00000232726.2
CDS-3UTR CAA 90 bp ATTCATGTGTGTGTGTGTGTTGTTAACTGTTTTCTAATGGGAGGGAGAAAGAAATCTGGGAGGCTGTGCTaGTGCCGGGAGCCCGCGGCA +
Preference number: 5 (lower is better)
Translates to: IHVCVCVVNCFLMGGRKKSGRLC*CREPAA
Trigger: TGCCGCGGGCTCCCGGCACAAGCACAGCCTCCCAGA...TTTCTTTCTCCCTCCCATTAGAAAACAGTTAACAACACACACACACACATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CAA 90 bp CCCCCAAAACAGAGATGGGATATTTCTGATGGTCTTATAATGACAGCTATAGCATCCAGCAACTCTCCTTaGGGTTCTCCACCACCCTTA +
Preference number: 5 (lower is better)
Translates to: PPKQRWDISDGLIMTAIASSNSP*GSPPPL
Trigger: TAAGGGTGGTGGAGAACCCAAAGGAGAGTTGCTGGA...TGCTATAGCTGTCATTATAAGACCATCAGAAATATCCCATCTCTGTTTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CAA 90 bp CCCCCAAAACAGAGATGGGATATTTCTGATGGTCTTATAATGACAGCTATAGCAGACCCAAAGTCACGCTaGATAGCCTCCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: PPKQRWDISDGLIMTAIADPKSR*IASSNS
Trigger: AGAGTTGCTGGAGGCTATCAAGCGTGACTTTGGGTC...TGCTATAGCTGTCATTATAAGACCATCAGAAATATCCCATCTCTGTTTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CAA 90 bp TCAGGTATGTGGAAAGACATCAATAAAGACTACAGCACCCCAGTCATAGTGCTGAAGGCCTGTTGTTCCTaGCAATGGGTCCTGATTAGA +
Preference number: 5 (lower is better)
Translates to: SGMWKDINKDYSTPVIVLKACCS*QWVLIR
Trigger: TCTAATCAGGACCCATTGCAAGGAACAACAGGCCTT...CAGCACTATGACTGGGGTGCTGTAGTCTTTATTGATGTCTTTCCACATACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS-3UTR CAA 90 bp AAAGTCACAGAAGGAGGGTGTTTTGTTTTCAGTGAAGCAGTAAGAGGGAGGGACGTAACATTCTCCCAGTaGATTACATTCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: KVTEGGCFVFSEAVRGRDVTFSQ*ITFQIA
Trigger: AGCTATTTGGAATGTAATCAACTGGGAGAATGTTAC...GTCCCTCCCTCTTACTGCTTCACTGAAAACAAAACACCCTCCTTCTGTGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007012.6
CDS CCA 72 bp GTGTGGCTCCAGCGCGCCATAGTCGTAAGGCAGGTCTaGGAGGCTGTGCTTGTGCCGGGAGCCCGCGGCACC +
Preference number: 6 (lower is better)
Translates to: VWLQRAIVVRQV*EAVLVPGARGT
Trigger: GGTGCCGCGGGCTCCCGGCACAAGCACAGCCTCCCAGACCTGCCTTACGACTATGGCGCGCTGGAGCCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007012.6
ENSMUST00000232726.2
ENSMUST00000233451.2
CDS TCA 72 bp TGGCCAGAGCCTCGTGGTACTTCTCCTCGGTGGCGTTaGGATTGTTCACGTAGGCCGCGTGGTGCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: WPEPRGTSPRWR*DCSRRPRGACC
Trigger: ACAGCAAGCACCACGCGGCCTACGTGAACAATCTCAACGCCACCGAGGAGAAGTACCACGAGGCTCTGGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000007012.6
ENSMUST00000232726.2
CDS TCA 72 bp AGCAGGCAGCAATCTGTAAGCGACCTTGCTCCTTATTaGAGCCAAGCCAGCCCCAGCCTGAACCTTGGACTC +
Preference number: 6 (lower is better)
Translates to: SRQQSVSDLAPY*SQASPSLNLGL
Trigger: GAGTCCAAGGTTCAGGCTGGGGCTGGCTTGGCTTCAATAAGGAGCAAGGTCGCTTACAGATTGCTGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000007012.6
ENSMUST00000232726.2
CDS CAA 72 bp TTCTCCTTAAACTTCTCAAAAGACCCAAAGTCACGCTaGATAGCCTCCAGCAACTCTCCTTTGGGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: FSLNFSKDPKSR*IASSNSPLGSP
Trigger: TGGAGAACCCAAAGGAGAGTTGCTGGAGGCTATCAAGCGTGACTTTGGGTCTTTTGAGAAGTTTAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000007012.6
ENSMUST00000232726.2