Pregenerated sensors for SOCS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056153Ensembl transcript IDs: ENSMUST00000070116.12, ENSMUST00000123826.2, ENSMUST00000125362.8, ENSMUST00000145120.3, ENSMUST00000236108.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTAAAAGCAAGGGTTGGAGGTGCCACTGAATCTCTTGCCTATACTTaGGGCCCTTTTCCTTCATCCAGCCTTGATATGAGGGTTTGTTCC | + |
Preference number: 1 (lower is better) Translates to: LKARVGGATESLAYT*GPFPSSSLDMRVCS Trigger: GGAACAAACCCTCATATCAAGGCTGGATGAAGGAAAAGGGCCCCAAGTATAGGCAAGAGATTCAGTGGCACCTCCAACCCTTGCTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR TCA 90 bp | ACTCTCCATAGCTCTCTTATTTATAAAAATGTGTTAAGTGTCTTATaGAGCCCCAAATTAACCCTCAGCCTCCAGCATTTCTGGTGGTGG | + |
Preference number: 1 (lower is better) Translates to: TLHSSLIYKNVLSVL*SPKLTLSLQHFWWW Trigger: CCACCACCAGAAATGCTGGAGGCTGAGGGTTAATTTGGGGCTTCATAAGACACTTAACACATTTTTATAAATAAGAGAGCTATGGAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR GCA 90 bp | GGGGACAGTCCTGAGACTTCTATGAGCCATGATTGCCAGGACATGTaGATATTTTTGAAACATGAAGTCATCTCAACCTTCATCATTAAT | + |
Preference number: 1 (lower is better) Translates to: GDSPETSMSHDCQDM*IFLKHEVISTFIIN Trigger: ATTAATGATGAAGGTTGAGATGACTTCATGTTTCAAAAATATGCACATGTCCTGGCAATCATGGCTCATAGAAGTCTCAGGACTGTCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR TCA 90 bp | AAACATGAAGTCATCTCAACCTTCATCATTAATACAGTGACTATGTaGCAACACCTGCCATCTAATGTAGATGTGGGGACTGTCAACTCA | + |
Preference number: 1 (lower is better) Translates to: KHEVISTFIINTVTM*QHLPSNVDVGTVNS Trigger: TGAGTTGACAGTCCCCACATCTACATTAGATGGCAGGTGTTGTCACATAGTCACTGTATTAATGATGAAGGTTGAGATGACTTCATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR CCA 90 bp | AAGCCCCAAATTAACCCTCAGCCTCCAGCATTTCTGGTGGTGGAGTATACAGTAGGTTTAGAGTTAGAATaGTCAAACACAGCACACTGT | + |
Preference number: 2 (lower is better) Translates to: KPQINPQPPAFLVVEYTVGLELE*SNTAHC Trigger: ACAGTGTGCTGTGTTTGACCATTCTAACTCTAAACC...TACTGTATACTCCACCACCAGAAATGCTGGAGGCTGAGGGTTAATTTGGGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR TCA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGAATACAGTGACTATGTaGCAACACCTGCCATCTAAT | + |
Preference number: 2 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMNTVTM*QHLPSN Trigger: ATTAGATGGCAGGTGTTGTCACATAGTCACTGTATT...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR CCA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGCAGCAAAGACTTCAATaGCGATGTAAGTCTGTAAAC | + |
Preference number: 2 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMQQRLQ*RCKSVN Trigger: GTTTACAGACTTACATCGCCATTGAAGTCTTTGCTG...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR CCA 90 bp | ACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTACAGCAAAGACTTCAATaGCGATGTAAGTCTGTAAAC | + |
Preference number: 2 (lower is better) Translates to: THTNTHTPHKNQGYLTFVQQRLQ*RCKSVN Trigger: GTTTACAGACTTACATCGCCATTGAAGTCTTTGCTG...TACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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3UTR CAA 90 bp | CCTGAGACTTCTATGAGCCATGATTGCCAGGACATGTGCATATTTTaGAAACATGAAGTCATCTCAACCTTCATCATTAATACAGTGACT | + |
Preference number: 2 (lower is better) Translates to: PETSMSHDCQDMCIF*KHEVISTFIINTVT Trigger: AGTCACTGTATTAATGATGAAGGTTGAGATGACTTCATGTTTCAAAAATATGCACATGTCCTGGCAATCATGGCTCATAGAAGTCTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR TCA 90 bp | GAGTTAGCCTATTTGGCACATCATTTTATTCAACAGAAAACTGTCGCTCTGTGTTCATCATTAATACAGTaGCTATGTGACAACACCTGC | + |
Preference number: 2 (lower is better) Translates to: ELAYLAHHFIQQKTVALCSSLIQ*LCDNTC Trigger: GCAGGTGTTGTCACATAGTCACTGTATTAATGATGA...ACACAGAGCGACAGTTTTCTGTTGAATAAAATGATGTGCCAAATAGGCTAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR CAA 90 bp | ATACTTTATGTGTTTCATTTCCTTAATGCTAACGAGTTAGCCTATTaGGCACATCATTTTATTCAACAGAAAACTGTCGCTCTGTGTGGC | + |
Preference number: 2 (lower is better) Translates to: ILYVFHFLNANELAY*AHHFIQQKTVALCG Trigger: GCCACACAGAGCGACAGTTTTCTGTTGAATAAAATGATGTGCCAAATAGGCTAACTCGTTAGCATTAAGGAAATGAAACACATAAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR CCA 72 bp | AGGGTTGGAGGTGCCACTGAATCTCTTGCCTATACTTaGGGCCCTTTTCCTTCATCCAGCCTTGATATGAGG | + |
Preference number: 3 (lower is better) Translates to: RVGGATESLAYT*GPFPSSSLDMR Trigger: CCTCATATCAAGGCTGGATGAAGGAAAAGGGCCCCAAGTATAGGCAAGAGATTCAGTGGCACCTCCAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR CAA 90 bp | AAGCCCCAAATTAACCCTCAGCCTCCAGCATTTCTGGTGGTGGAGTATACAGTAAGTCAGTATTTCCCATaGTTTCCCACTTCTGTCAGA | + |
Preference number: 3 (lower is better) Translates to: KPQINPQPPAFLVVEYTVSQYFP*FPTSVR Trigger: TCTGACAGAAGTGGGAAACAATGGGAAATACTGACT...TACTGTATACTCCACCACCAGAAATGCTGGAGGCTGAGGGTTAATTTGGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR GCA 72 bp | GTTGGGGACAGTCCTGAGACTTCTATGAGCCATGATTaGCAGGACATGTGCATATTTTTGAAACATGAAGTC | + |
Preference number: 3 (lower is better) Translates to: VGDSPETSMSHD*QDMCIFLKHEV Trigger: GACTTCATGTTTCAAAAATATGCACATGTCCTGGCAATCATGGCTCATAGAAGTCTCAGGACTGTCCCCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR CAA 90 bp | GTATTAATTTCATGGCATATCAACTATGAGACTTCCTTACCCCAACATGACAATAGAGGACAGGGGAAGTaGGGAAAGAGCACTGGGAAG | + |
Preference number: 3 (lower is better) Translates to: VLISWHINYETSLPQHDNRGQGK*GKSTGK Trigger: CTTCCCAGTGCTCTTTCCCAACTTCCCCTGTCCTCT...ATTGTCATGTTGGGGTAAGGAAGTCTCATAGTTGATATGCCATGAAATTAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR TCA 72 bp | TGCCTATACTTGGGGCCCTTTTCCTTCATCCAGCCTTaGTATGAGGGTTTGTTCCTAGTCTTAATGGAATTT | + |
Preference number: 3 (lower is better) Translates to: CLYLGPFSFIQP*YEGLFLVLMEF Trigger: AAATTCCATTAAGACTAGGAACAAACCCTCATATCAAGGCTGGATGAAGGAAAAGGGCCCCAAGTATAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR TCA 72 bp | GTCATCTCAACCTTCATCATTAATACAGTGACTATGTaGCAACACCTGCCATCTAATGTAGATGTGGGGACT | + |
Preference number: 3 (lower is better) Translates to: VISTFIINTVTM*QHLPSNVDVGT Trigger: AGTCCCCACATCTACATTAGATGGCAGGTGTTGTCACATAGTCACTGTATTAATGATGAAGGTTGAGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR-3UTR CAA 90 bp | TATGTAACTGAAAAATCTCTCTCTCTCTTACACACACGAACACACACACACCTCCCACCCTTGAACAAATaGATGACTCTCACACATAAA | + |
Preference number: 3 (lower is better) Translates to: YVTEKSLSLLHTRTHTHLPPLNK*MTLTHK Trigger: TTTATGTGTGAGAGTCATCAATTTGTTCAAGGGTGG...GAGGTGTGTGTGTGTTCGTGTGTGTAAGAGAGAGAGAGATTTTTCAGTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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3UTR-3UTR CAA 90 bp | GTATTAATTTCATGGCATATCAACTATGAGACTTCCTTACCCCAACATGACAATCCACCCTTGAACAAATaGATGACTCTCACACATAAA | + |
Preference number: 3 (lower is better) Translates to: VLISWHINYETSLPQHDNPPLNK*MTLTHK Trigger: TTTATGTGTGAGAGTCATCAATTTGTTCAAGGGTGG...ATTGTCATGTTGGGGTAAGGAAGTCTCATAGTTGATATGCCATGAAATTAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR CCA 72 bp | CTGATGTCATTCAAGGTTGTTGGTTTAGAGTTAGAATaGTCAAACACAGCACACTGTAAAGATTATACAGAA | + |
Preference number: 3 (lower is better) Translates to: LMSFKVVGLELE*SNTAHCKDYTE Trigger: TTCTGTATAATCTTTACAGTGTGCTGTGTTTGACCATTCTAACTCTAAACCAACAACCTTGAATGACATCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR TCA 90 bp | GAGTTAGCCTATTTGGCACATCATTTTATTCAACAGAAAACTGTCGCTCTGTGTGCTCAGGTCCCCGGGTaGGCTGGGGCTGCAGCGGGA | + |
Preference number: 4 (lower is better) Translates to: ELAYLAHHFIQQKTVALCAQVPG*AGAAAG Trigger: TCCCGCTGCAGCCCCAGCTCACCCGGGGACCTGAGC...ACACAGAGCGACAGTTTTCTGTTGAATAAAATGATGTGCCAAATAGGCTAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAGGTCCCCGGGTGAGCTaGGGCTGCAGCGGGACTCAG | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQGPRVS*GCSGTQ Trigger: CTGAGTCCCGCTGCAGCCCCAGCTCACCCGGGGACC...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | AAGCCCCAAATTAACCCTCAGCCTCCAGCATTTCTGGTGGTGGAGTATACAGTAGGCCCGAGAGGCCACTaGAGTTCCTTTGGATTGGGT | + |
Preference number: 4 (lower is better) Translates to: KPQINPQPPAFLVVEYTVGPRGH*SSFGLG Trigger: ACCCAATCCAAAGGAACTTCAGTGGCCTCTCGGGCC...TACTGTATACTCCACCACCAGAAATGCTGGAGGCTGAGGGTTAATTTGGGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CCA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGCTCAGGGCGCGGCTCTaGCTGCAGGTCTCGCAGCTC | + |
Preference number: 4 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMLRARL*LQVSQL Trigger: GAGCTGCGAGACCTGCAGCCAGAGCCGCGCCCTGAG...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAACTCAGGGCGCGGCTCTaGCTGCAGGTCTCGCAGCTC | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQLRARL*LQVSQL Trigger: GAGCTGCGAGACCTGCAGCCAGAGCCGCGCCCTGAG...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CCA 90 bp | CACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAACAATGGTCCCCGGGTGAGCTaGGGCTGCAGCGGGACTCAG | + |
Preference number: 4 (lower is better) Translates to: HEHTHTSQKPGLSYFCNNGPRVS*GCSGTQ Trigger: CTGAGTCCCGCTGCAGCCCCAGCTCACCCGGGGACC...ATTGTTACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR TCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAGCTCAGGTCCCCGGGTaGGCTGGGGCTGCAGCGGGA | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKAQVPG*AGAAAG Trigger: TCCCGCTGCAGCCCCAGCTCACCCGGGGACCTGAGC...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR GCA 90 bp | AAGCCCCAAATTAACCCTCAGCCTCCAGCATTTCTGGTGGTGGAGTATACAGTAACCGCCTCTTCAAAGTaGCCATCAGGCTCTCGCTTT | + |
Preference number: 4 (lower is better) Translates to: KPQINPQPPAFLVVEYTVTASSK*PSGSRF Trigger: AAAGCGAGAGCCTGATGGGCACTTTGAAGAGGCGGT...TACTGTATACTCCACCACCAGAAATGCTGGAGGCTGAGGGTTAATTTGGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR GCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTGCCAACTTCCCCTCTaGCTCCCAGCGTGTGATGGG | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTCQLPL*LPACDG Trigger: CCCATCACACGCTGGGAGGCAGAGGGGAAGTTGGCA...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR GCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTAAGCGGCACAGGTACTaGAGCGAGCGCACCTGCATG | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTKRHRY*SERTCM Trigger: CATGCAGGTGCGCTCGCTGCAGTACCTGTGCCGCTT...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAGGTCCCCGGGTGAGCTaGGGCTGCAGCGGGACTCAG | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKGPRVS*GCSGTQ Trigger: CTGAGTCCCGCTGCAGCCCCAGCTCACCCGGGGACC...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CCA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGACGTGTTCCTCCAGGTaGAGGCTCAGGTCCCCGGGT | + |
Preference number: 4 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMTCSSR*RLRSPG Trigger: ACCCGGGGACCTGAGCCTCCACCTGGAGGAACACGT...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CCA 90 bp | ACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAACGTGTTCCTCCAGGTaGAGGCTCAGGTCCCCGGGT | + |
Preference number: 4 (lower is better) Translates to: THTNTHTPHKNQGYLTFVTCSSR*RLRSPG Trigger: ACCCGGGGACCTGAGCCTCCACCTGGAGGAACACGT...TACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAACGTGTTCCTCCAGGTaGAGGCTCAGGTCCCCGGGT | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQTCSSR*RLRSPG Trigger: ACCCGGGGACCTGAGCCTCCACCTGGAGGAACACGT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | ACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAGAGCACGCACATCCTTaGGCCCACCAGGAGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: THTNTHTPHKNQGYLTFVEHAHP*AHQELK Trigger: CTTCAGCTCCTGGTGGGCTCAAGGATGTGCGTGCTC...TACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAGAGCACGCACATCCTTaGGCCCACCAGGAGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQEHAHP*AHQELK Trigger: CTTCAGCTCCTGGTGGGCTCAAGGATGTGCGTGCTC...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTGGCCCGAGAGGCCACTaGAGTTCCTTTGGATTGGGT | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTGPRGH*SSFGLG Trigger: ACCCAATCCAAAGGAACTTCAGTGGCCTCTCGGGCC...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR GCA 90 bp | TATGTAACTGAAAAATCTCTCTCTCTCTTACACACACGAACACACACACACCTCACGCAGTGCCGCCCTTaGCCTTGGTCTTCTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: YVTEKSLSLLHTRTHTHLTQCRP*PWSSAW Trigger: CCAAGCAGAAGACCAAGGGCAAGGGCGGCACTGCGT...GAGGTGTGTGTGTGTTCGTGTGTGTAAGAGAGAGAGAGATTTTTCAGTTACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR GCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAATGCCAACTTCCCCTCTaGCTCCCAGCGTGTGATGGG | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQCQLPL*LPACDG Trigger: CCCATCACACGCTGGGAGGCAGAGGGGAAGTTGGCA...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR GCA 90 bp | TATGTAACTGAAAAATCTCTCTCTCTCTTACACACACGAACACACACACACCTCAAGCGGCACAGGTACTaGAGCGAGCGCACCTGCATG | + |
Preference number: 4 (lower is better) Translates to: YVTEKSLSLLHTRTHTHLKRHRY*SERTCM Trigger: CATGCAGGTGCGCTCGCTGCAGTACCTGTGCCGCTT...GAGGTGTGTGTGTGTTCGTGTGTGTAAGAGAGAGAGAGATTTTTCAGTTACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CCA 90 bp | CACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAACAATGCAGCGGCCAGGGCGTaGGGCTATAATGGTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: HEHTHTSQKPGLSYFCNNAAARA*GYNGGF Trigger: GAAGCCACCATTATAGCCCCACGCCCTGGCCGCTGC...ATTGTTACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAACTCAGGGCGCGGCTCTaGCTGCAGGTCTCGCAGCTC | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKLRARL*LQVSQL Trigger: GAGCTGCGAGACCTGCAGCCAGAGCCGCGCCCTGAG...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTGCAAGGGACTGGGGCTaGACCACCATGAACTCAGTT | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTARDWG*TTMNSV Trigger: AACTGAGTTCATGGTGGTTCAGCCCCAGTCCCTTGC...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAACTCGCATCTCCATCTTaGTGCACGTCTCCTCCGAGC | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQLASPS*CTSPPS Trigger: GCTCGGAGGAGACGTGCATCAAGATGGAGATGCGAG...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAGGCCCGAGAGGCCACTaGAGTTCCTTTGGATTGGGT | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQGPRGH*SSFGLG Trigger: ACCCAATCCAAAGGAACTTCAGTGGCCTCTCGGGCC...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAGCGAGCGCACCTGCATaGATCGTGACACTGGATTGG | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQASAPA*IVTLDW Trigger: CCAATCCAGTGTCACGATTCATGCAGGTGCGCTCGC...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
||
CDS-3UTR GCA 90 bp | CACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAACAATACGCAGTGCCGCCCTTaGCCTTGGTCTTCTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: HEHTHTSQKPGLSYFCNNTQCRP*PWSSAW Trigger: CCAAGCAGAAGACCAAGGGCAAGGGCGGCACTGCGT...ATTGTTACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
||
CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAGCAAGGGACTGGGGCTaGACCACCATGAACTCAGTT | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQARDWG*TTMNSV Trigger: AACTGAGTTCATGGTGGTTCAGCCCCAGTCCCTTGC...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGAGGTCCTGGTCCACATaGCTGTCGTCTTCGGAGAAG | + |
Preference number: 4 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMRSWST*LSSSEK Trigger: CTTCTCCGAAGACGACAGTCATGTGGACCAGGACCT...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
||
CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAAGGTCCTGGTCCACATaGCTGTCGTCTTCGGAGAAG | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQRSWST*LSSSEK Trigger: CTTCTCCGAAGACGACAGTCATGTGGACCAGGACCT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | ACACACACACACACACAGAATGGCTTAGAGGTTATGTTTGTATCATCTAAGTTCGCGAGCGCACCTGCATaGATCGTGACACTGGATTGG | + |
Preference number: 4 (lower is better) Translates to: THTHTQNGLEVMFVSSKFASAPA*IVTLDW Trigger: CCAATCCAGTGTCACGATTCATGCAGGTGCGCTCGC...GAACTTAGATGATACAAACATAACCTCTAAGCCATTCTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR GCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTACCGCCTCTTCAAAGTaGCCATCAGGCTCTCGCTTT | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTTASSK*PSGSRF Trigger: AAAGCGAGAGCCTGATGGGCACTTTGAAGAGGCGGT...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
||
CDS-3UTR GCA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGTGCAGCGAGCGCACCTaGATGAATCGTGACACTGGA | + |
Preference number: 4 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMCSERT*MNRDTG Trigger: TCCAGTGTCACGATTCATGCAGGTGCGCTCGCTGCA...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
||
CDS-3UTR CCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAGCAGCGGCCAGGGCGTaGGGCTATAATGGTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKAAARA*GYNGGF Trigger: GAAGCCACCATTATAGCCCCACGCCCTGGCCGCTGC...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
||
CDS-3UTR CCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTATCCACAAGGATCTCTaGGCCTACAACCAGGTCCTG | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTIHKDL*AYNQVL Trigger: CAGGACCTGGTTGTAGGCCCAGAGATCCTTGTGGAT...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR TCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAGAGCACGCACATCCTTaGGCCCACCAGGAGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKEHAHP*AHQELK Trigger: CTTCAGCTCCTGGTGGGCTCAAGGATGTGCGTGCTC...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
||
CDS-3UTR GCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAACCGCCTCTTCAAAGTaGCCATCAGGCTCTCGCTTT | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQTASSK*PSGSRF Trigger: AAAGCGAGAGCCTGATGGGCACTTTGAAGAGGCGGT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
||
CDS-3UTR GCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAATGCCAACTTCCCCTCTaGCTCCCAGCGTGTGATGGG | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKCQLPL*LPACDG Trigger: CCCATCACACGCTGGGAGGCAGAGGGGAAGTTGGCA...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
||
CDS-3UTR GCA 90 bp | ACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAACCATCTGGCACATTTaGCAACTTCCCCTCTGCCTC | + |
Preference number: 4 (lower is better) Translates to: THTNTHTPHKNQGYLTFVTIWHI*QLPLCL Trigger: GAGGCAGAGGGGAAGTTGGCAAATGTGCCAGATGGT...TACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR GCA 90 bp | CACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAACAATTGCAGCGAGCGCACCTaGATGAATCGTGACACTGGA | + |
Preference number: 4 (lower is better) Translates to: HEHTHTSQKPGLSYFCNNCSERT*MNRDTG Trigger: TCCAGTGTCACGATTCATGCAGGTGCGCTCGCTGCA...ATTGTTACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
||
CDS-3UTR GCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAAAGCGGCACAGGTACTaGAGCGAGCGCACCTGCATG | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKKRHRY*SERTCM Trigger: CATGCAGGTGCGCTCGCTGCAGTACCTGTGCCGCTT...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAATCCACAAGGATCTCTaGGCCTACAACCAGGTCCTG | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQIHKDL*AYNQVL Trigger: CAGGACCTGGTTGTAGGCCCAGAGATCCTTGTGGAT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | GTATTAATTTCATGGCATATCAACTATGAGACTTCCTTACCCCAACATGACAATCTCGCATCTCCATCTTaGTGCACGTCTCCTCCGAGC | + |
Preference number: 4 (lower is better) Translates to: VLISWHINYETSLPQHDNLASPS*CTSPPS Trigger: GCTCGGAGGAGACGTGCATCAAGATGGAGATGCGAG...ATTGTCATGTTGGGGTAAGGAAGTCTCATAGTTGATATGCCATGAAATTAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR TCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAGCGAGCGCACCTGCATaGATCGTGACACTGGATTGG | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKASAPA*IVTLDW Trigger: CCAATCCAGTGTCACGATTCATGCAGGTGCGCTCGC...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTCTATTCTGGTGTACTaGCGGATAACAAAGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTSILVY*RITKRH Trigger: GTGCCGCTTTGTTATCCGTCAGTACACCAGAATAGA...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR GCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTATACCACCCCTGTTTTaGAAGCTTCTTCAGCTCCTC | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTIPPLF*KLLQLL Trigger: GAGGAGCTGAAGAAGCTTGCAAAACAGGGGTGGTAT...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR TCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAAGGTCCTGGTCCACATaGCTGTCGTCTTCGGAGAAG | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKRSWST*LSSSEK Trigger: CTTCTCCGAAGACGACAGTCATGTGGACCAGGACCT...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAATCTATTCTGGTGTACTaGCGGATAACAAAGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQSILVY*RITKRH Trigger: GTGCCGCTTTGTTATCCGTCAGTACACCAGAATAGA...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR GCA 90 bp | AAGCCCCAAATTAACCCTCAGCCTCCAGCATTTCTGGTGGTGGAGTATACAGTAGAGTCCCTGATTGAATaGTCGATTAAGTCAACTATA | + |
Preference number: 4 (lower is better) Translates to: KPQINPQPPAFLVVEYTVESLIE*SIKSTI Trigger: TATAGTTGACTTAATCGAGCATTCAATCAGGGACTC...TACTGTATACTCCACCACCAGAAATGCTGGAGGCTGAGGGTTAATTTGGGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR GCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAATGCAGCGAGCGCACCTaGATGAATCGTGACACTGGA | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKCSERT*MNRDTG Trigger: TCCAGTGTCACGATTCATGCAGGTGCGCTCGCTGCA...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR GCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAACCATCTGGCACATTTaGCAACTTCCCCTCTGCCTC | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKTIWHI*QLPLCL Trigger: GAGGCAGAGGGGAAGTTGGCAAATGTGCCAGATGGT...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CCA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGTCAGGCTCTCGCTTTTaGATCTGTTCTTCCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMSGSRF*ICSSLS Trigger: AGAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGA...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CCA 90 bp | ACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTATCAGGCTCTCGCTTTTaGATCTGTTCTTCCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: THTNTHTPHKNQGYLTFVSGSRF*ICSSLS Trigger: AGAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGA...TACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR TCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAATCTATTCTGGTGTACTaGCGGATAACAAAGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKSILVY*RITKRH Trigger: GTGCCGCTTTGTTATCCGTCAGTACACCAGAATAGA...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR GCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAATACCACCCCTGTTTTaGAAGCTTCTTCAGCTCCTC | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKIPPLF*KLLQLL Trigger: GAGGAGCTGAAGAAGCTTGCAAAACAGGGGTGGTAT...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR GCA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTGAGTCCCTGATTGAATaGTCGATTAAGTCAACTATA | + |
Preference number: 4 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTESLIE*SIKSTI Trigger: TATAGTTGACTTAATCGAGCATTCAATCAGGGACTC...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR TCA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAAGGCAATCGAGATCTTaGATAACAAAATGCTCCATT | + |
Preference number: 4 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQRQSRS*ITKCSI Trigger: AATGGAGCATTTTGTTATTCAAGATCTCGATTGCCT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR TCA 90 bp | TATGTAACTGAAAAATCTCTCTCTCTCTTACACACACGAACACACACACACCTCAGGCAATCGAGATCTTaGATAACAAAATGCTCCATT | + |
Preference number: 4 (lower is better) Translates to: YVTEKSLSLLHTRTHTHLRQSRS*ITKCSI Trigger: AATGGAGCATTTTGTTATTCAAGATCTCGATTGCCT...GAGGTGTGTGTGTGTTCGTGTGTGTAAGAGAGAGAGAGATTTTTCAGTTACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAATCAGGCTCTCGCTTTTaGATCTGTTCTTCCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKSGSRF*ICSSLS Trigger: AGAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGA...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR GCA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAGAGTCCCTGATTGAATaGTCGATTAAGTCAACTATA | + |
Preference number: 4 (lower is better) Translates to: GNRTIQLLPTKTIITSLKESLIE*SIKSTI Trigger: TATAGTTGACTTAATCGAGCATTCAATCAGGGACTC...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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3UTR CAA 72 bp | CGCTCTGTGTGGCTGGTTTCCTTAAATTTTTCAGTTTaGTGGTTATTTACTGTGATACGTGACTTTCTAATT | + |
Preference number: 4 (lower is better) Translates to: RSVWLVSLNFSV*WLFTVIRDFLI Trigger: AATTAGAAAGTCACGTATCACAGTAAATAACCACAAAACTGAAAAATTTAAGGAAACCAGCCACACAGAGCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR CAA 72 bp | GTGTTTCATTTCCTTAATGCTAACGAGTTAGCCTATTaGGCACATCATTTTATTCAACAGAAAACTGTCGCT | + |
Preference number: 4 (lower is better) Translates to: VFHFLNANELAY*AHHFIQQKTVA Trigger: AGCGACAGTTTTCTGTTGAATAAAATGATGTGCCAAATAGGCTAACTCGTTAGCATTAAGGAAATGAAACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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3UTR CAA 72 bp | TTAGGAGATTCTAAGACTCCATCTCATCCTTTCTGGTaGGAGAACTTGCATCACTTTTCAAAAACAAATTCA | + |
Preference number: 4 (lower is better) Translates to: LGDSKTPSHPFW*ENLHHFSKTNS Trigger: TGAATTTGTTTTTGAAAAGTGATGCAAGTTCTCCAACCAGAAAGGATGAGATGGAGTCTTAGAATCTCCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS GCA 90 bp | CCGGGTGAGCTGGGGCTGCAGCGGGACTCAGGGCGCGGCTCTGGCTaGAGGTCTCGCAGCTCCCTGGGCTGTAGCTCCCGCAGATCCTTG | + |
Preference number: 5 (lower is better) Translates to: PGELGLQRDSGRGSG*RSRSSLGCSSRRSL Trigger: CAAGGATCTGCGGGAGCTACAGCCCAGGGAGCTGCGAGACCTGCAGCCAGAGCCGCGCCCTGAGTCCCGCTGCAGCCCCAGCTCACCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS GCA 90 bp | CGTGTTCCTCCAGGTGGAGGCTCAGGTCCCCGGGTGAGCTGGGGCTaGAGCGGGACTCAGGGCGCGGCTCTGGCTGCAGGTCTCGCAGCT | + |
Preference number: 5 (lower is better) Translates to: RVPPGGGSGPRVSWG*SGTQGAALAAGLAA Trigger: AGCTGCGAGACCTGCAGCCAGAGCCGCGCCCTGAGTCCCGCTGCAGCCCCAGCTCACCCGGGGACCTGAGCCTCCACCTGGAGGAACACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS TCA 90 bp | TACTACAGGCACGTGTTCCTCCAGGTGGAGGCTCAGGTCCCCGGGTaGGCTGGGGCTGCAGCGGGACTCAGGGCGCGGCTCTGGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: YYRHVFLQVEAQVPG*AGAAAGLRARLWLQ Trigger: CTGCAGCCAGAGCCGCGCCCTGAGTCCCGCTGCAGCCCCAGCTCACCCGGGGACCTGAGCCTCCACCTGGAGGAACACGTGCCTGTAGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS GCA 90 bp | GTGTCCTCATCTGTAGACGCAGTGCCGCCCTTGCCCTTGGTCTTCTaGTTGGCGGACAACCGCCTCTTCAAAGTGCCCATCAGGCTCTCG | + |
Preference number: 5 (lower is better) Translates to: VSSSVDAVPPLPLVF*LADNRLFKVPIRLS Trigger: CGAGAGCCTGATGGGCACTTTGAAGAGGCGGTTGTCCGCCAAGCAGAAGACCAAGGGCAAGGGCGGCACTGCGTCTACAGATGAGGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
||
CDS GCA 90 bp | CCTTGCCCTTGGTCTTCTGCTTGGCGGACAACCGCCTCTTCAAAGTaGCCATCAGGCTCTCGCTTTTGGATCTGTTCTTCCCTTTCTCAT | + |
Preference number: 5 (lower is better) Translates to: PCPWSSAWRTTASSK*PSGSRFWICSSLSH Trigger: ATGAGAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGATGGGCACTTTGAAGAGGCGGTTGTCCGCCAAGCAGAAGACCAAGGGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS GCA 90 bp | TCAGGCTCTCGCTTTTGGATCTGTTCTTCCCTTTCTCATCCTCGCTaGCAATGTCACAACTGGCCATGTCTTTGCCATAACAGCTCCCGA | + |
Preference number: 5 (lower is better) Translates to: SGSRFWICSSLSHPR*QCHNWPCLCHNSSR Trigger: TCGGGAGCTGTTATGGCAAAGACATGGCCAGTTGTGACATTGGCAGCGAGGATGAGAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS-3UTR CAA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTGGAGCACGCACATCCTaGAGCCCACCAGGAGCTGAA | + |
Preference number: 5 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTGARTS*SPPGAE Trigger: TTCAGCTCCTGGTGGGCTCAAGGATGTGCGTGCTCC...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS GCA 90 bp | TCCCTTTCTCATCCTCGCTGCCAATGTCACAACTGGCCATGTCTTTaGCATAACAGCTCCCGAATAAAGAGTCATCTTTCACGAAGTCAC | + |
Preference number: 5 (lower is better) Translates to: SLSHPRCQCHNWPCL*HNSSRIKSHLSRSH Trigger: GTGACTTCGTGAAAGATGACTCTTTATTCGGGAGCTGTTATGGCAAAGACATGGCCAGTTGTGACATTGGCAGCGAGGATGAGAAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 ENSMUST00000236108.2 |
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CDS CCA 90 bp | TGGATCTGTTCTTCCCTTTCTCATCCTCGCTGCCAATGTCACAACTaGCCATGTCTTTGCCATAACAGCTCCCGAATAAAGAGTCATCTT | + |
Preference number: 5 (lower is better) Translates to: WICSSLSHPRCQCHN*PCLCHNSSRIKSHL Trigger: AAGATGACTCTTTATTCGGGAGCTGTTATGGCAAAGACATGGCCAGTTGTGACATTGGCAGCGAGGATGAGAAAGGGAAGAACAGATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS-3UTR CAA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTAACCATCTGGCACATTaGCCAACTTCCCCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTNHLAH*PTSPLP Trigger: AGGCAGAGGGGAAGTTGGCAAATGTGCCAGATGGTT...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CAA 90 bp | GTATTAATTTCATGGCATATCAACTATGAGACTTCCTTACCCCAACATGACAATGGAGCACGCACATCCTaGAGCCCACCAGGAGCTGAA | + |
Preference number: 5 (lower is better) Translates to: VLISWHINYETSLPQHDNGARTS*SPPGAE Trigger: TTCAGCTCCTGGTGGGCTCAAGGATGTGCGTGCTCC...ATTGTCATGTTGGGGTAAGGAAGTCTCATAGTTGATATGCCATGAAATTAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
||
CDS-3UTR CAA 90 bp | ACACACACACACACACAGAATGGCTTAGAGGTTATGTTTGTATCATCTAAGTTCACTCGCATCTCCATCTaGATGCACGTCTCCTCCGAG | + |
Preference number: 5 (lower is better) Translates to: THTHTQNGLEVMFVSSKFTRISI*MHVSSE Trigger: CTCGGAGGAGACGTGCATCAAGATGGAGATGCGAGT...GAACTTAGATGATACAAACATAACCTCTAAGCCATTCTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CAA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAAACCATCTGGCACATTaGCCAACTTCCCCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQNHLAH*PTSPLP Trigger: AGGCAGAGGGGAAGTTGGCAAATGTGCCAGATGGTT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS TCA 90 bp | AATAAAGAGTCATCTTTCACGAAGTCACCAGCAAGGGACTGGGGCTaGACCACCATGAACTCAGTTTCGTCTTTGCTTTTACTCAGGTTA | + |
Preference number: 5 (lower is better) Translates to: NKESSFTKSPARDWG*TTMNSVSSLLLLRL Trigger: TAACCTGAGTAAAAGCAAAGACGAAACTGAGTTCATGGTGGTTCAGCCCCAGTCCCTTGCTGGTGACTTCGTGAAAGATGACTCTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 ENSMUST00000236108.2 |
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CDS-3UTR CAA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTATCAGGCTCTCGCTTTaGGATCTGTTCTTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTIRLSL*DLFFPF Trigger: GAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGAT...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CAA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAACATGGGGCCACTACTTaGCACCGAGTCATAAACTCT | + |
Preference number: 5 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQHGATT*HRVINS Trigger: AGAGTTTATGACTCGGTGCAAAGTAGTGGCCCCATG...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CAA 90 bp | ACACACACACACACACAGAATGGCTTAGAGGTTATGTTTGTATCATCTAAGTTCAACCATCTGGCACATTaGCCAACTTCCCCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: THTHTQNGLEVMFVSSKFNHLAH*PTSPLP Trigger: AGGCAGAGGGGAAGTTGGCAAATGTGCCAGATGGTT...GAACTTAGATGATACAAACATAACCTCTAAGCCATTCTGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CAA 90 bp | TATGTAACTGAAAAATCTCTCTCTCTCTTACACACACGAACACACACACACCTCATCAGGCTCTCGCTTTaGGATCTGTTCTTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: YVTEKSLSLLHTRTHTHLIRLSL*DLFFPF Trigger: GAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGAT...GAGGTGTGTGTGTGTTCGTGTGTGTAAGAGAGAGAGAGATTTTTCAGTTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CAA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAATCAGGCTCTCGCTTTaGGATCTGTTCTTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQIRLSL*DLFFPF Trigger: GAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGAT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CAA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAACTCGCATCTCCATCTaGATGCACGTCTCCTCCGAG | + |
Preference number: 5 (lower is better) Translates to: GNRTIQLLPTKTIITSLKTRISI*MHVSSE Trigger: CTCGGAGGAGACGTGCATCAAGATGGAGATGCGAGT...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CAA 90 bp | GTGTCATACAAAAGTCAGTATTTCCCATTGTTTCCCACTTCTGTCAGATGGATGAATACCACCCCTGTTTaGCAAGCTTCTTCAGCTCCT | + |
Preference number: 5 (lower is better) Translates to: VSYKSQYFPLFPTSVRWMNTTPV*QASSAP Trigger: AGGAGCTGAAGAAGCTTGCAAAACAGGGGTGGTATT...CATCCATCTGACAGAAGTGGGAAACAATGGGAAATACTGACTTTTGTATGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CAA 90 bp | CGATGTAAGTCTGTAAACTGTACTCAAGTCTTGTTTCTGAACCCCAAAGTGCAAAATACCACCCCTGTTTaGCAAGCTTCTTCAGCTCCT | + |
Preference number: 5 (lower is better) Translates to: RCKSVNCTQVLFLNPKVQNTTPV*QASSAP Trigger: AGGAGCTGAAGAAGCTTGCAAAACAGGGGTGGTATT...TTGCACTTTGGGGTTCAGAAACAAGACTTGAGTACAGTTTACAGACTTACATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CAA 90 bp | GTATTAATTTCATGGCATATCAACTATGAGACTTCCTTACCCCAACATGACAATCATGGGGCCACTACTTaGCACCGAGTCATAAACTCT | + |
Preference number: 5 (lower is better) Translates to: VLISWHINYETSLPQHDNHGATT*HRVINS Trigger: AGAGTTTATGACTCGGTGCAAAGTAGTGGCCCCATG...ATTGTCATGTTGGGGTAAGGAAGTCTCATAGTTGATATGCCATGAAATTAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CAA 90 bp | TCTCTTACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTCAGGCAATCGAGATCTaGAATAACAAAATGCTCCAT | + |
Preference number: 5 (lower is better) Translates to: SLTHTNTHTPHKNQGYLTQAIEI*NNKMLH Trigger: ATGGAGCATTTTGTTATTCAAGATCTCGATTGCCTG...AGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGTAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CAA 90 bp | ACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTAGTGCCAATCAACAAATaGTTCACTGATGAATCCACA | + |
Preference number: 5 (lower is better) Translates to: THTNTHTPHKNQGYLTFVVPINK*FTDEST Trigger: TGTGGATTCATCAGTGAACAATTTGTTGATTGGCAC...TACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CAA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAAATACCACCCCTGTTTaGCAAGCTTCTTCAGCTCCT | + |
Preference number: 5 (lower is better) Translates to: GNRTIQLLPTKTIITSLKNTTPV*QASSAP Trigger: AGGAGCTGAAGAAGCTTGCAAAACAGGGGTGGTATT...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CAA 90 bp | ACACACACGAACACACACACACCTCACAAAAACCAGGGTTATCTTACTTTTGTACAGGCAATCGAGATCTaGAATAACAAAATGCTCCAT | + |
Preference number: 5 (lower is better) Translates to: THTNTHTPHKNQGYLTFVQAIEI*NNKMLH Trigger: ATGGAGCATTTTGTTATTCAAGATCTCGATTGCCTG...TACAAAAGTAAGATAACCCTGGTTTTTGTGAGGTGTGTGTGTGTTCGTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 |
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CDS-3UTR CAA 90 bp | GTATTAATTTCATGGCATATCAACTATGAGACTTCCTTACCCCAACATGACAATGTGCCAATCAACAAATaGTTCACTGATGAATCCACA | + |
Preference number: 5 (lower is better) Translates to: VLISWHINYETSLPQHDNVPINK*FTDEST Trigger: TGTGGATTCATCAGTGAACAATTTGTTGATTGGCAC...ATTGTCATGTTGGGGTAAGGAAGTCTCATAGTTGATATGCCATGAAATTAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070116.12 |
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CDS-3UTR CAA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAAGTGCCAATCAACAAATaGTTCACTGATGAATCCACA | + |
Preference number: 5 (lower is better) Translates to: GNRTIQLLPTKTIITSLKVPINK*FTDEST Trigger: TGTGGATTCATCAGTGAACAATTTGTTGATTGGCAC...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS-3UTR CAA 90 bp | GGCAACAGAACAATTCAACTTCTCCCAACCAAAACAATTATCACATCCTTAAAACAGGCAATCGAGATCTaGAATAACAAAATGCTCCAT | + |
Preference number: 5 (lower is better) Translates to: GNRTIQLLPTKTIITSLKQAIEI*NNKMLH Trigger: ATGGAGCATTTTGTTATTCAAGATCTCGATTGCCTG...TTTTAAGGATGTGATAATTGTTTTGGTTGGGAGAAGTTGAATTGTTCTGTTGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS GCA 72 bp | CTGGGGCTGCAGCGGGACTCAGGGCGCGGCTCTGGCTaGAGGTCTCGCAGCTCCCTGGGCTGTAGCTCCCGC | + |
Preference number: 6 (lower is better) Translates to: LGLQRDSGRGSG*RSRSSLGCSSR Trigger: GCGGGAGCTACAGCCCAGGGAGCTGCGAGACCTGCAGCCAGAGCCGCGCCCTGAGTCCCGCTGCAGCCCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS TCA 72 bp | CACGTGTTCCTCCAGGTGGAGGCTCAGGTCCCCGGGTaGGCTGGGGCTGCAGCGGGACTCAGGGCGCGGCTC | + |
Preference number: 6 (lower is better) Translates to: HVFLQVEAQVPG*AGAAAGLRARL Trigger: GAGCCGCGCCCTGAGTCCCGCTGCAGCCCCAGCTCACCCGGGGACCTGAGCCTCCACCTGGAGGAACACGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS CCA 72 bp | GTTCCTCCAGGTGGAGGCTCAGGTCCCCGGGTGAGCTaGGGCTGCAGCGGGACTCAGGGCGCGGCTCTGGCT | + |
Preference number: 6 (lower is better) Translates to: VPPGGGSGPRVS*GCSGTQGAALA Trigger: AGCCAGAGCCGCGCCCTGAGTCCCGCTGCAGCCCCAGCTCACCCGGGGACCTGAGCCTCCACCTGGAGGAAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS CCA 72 bp | CAGGGCGCGGCTCTGGCTGCAGGTCTCGCAGCTCCCTaGGCTGTAGCTCCCGCAGATCCTTGCGCACACCGT | + |
Preference number: 6 (lower is better) Translates to: QGAALAAGLAAP*AVAPADPCAHR Trigger: ACGGTGTGCGCAAGGATCTGCGGGAGCTACAGCCCAGGGAGCTGCGAGACCTGCAGCCAGAGCCGCGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS CAA 72 bp | TCTCGCAGCTCCCTGGGCTGTAGCTCCCGCAGATCCTaGCGCACACCGTTGACTGGTCCTGGGCTGGCAGCA | + |
Preference number: 6 (lower is better) Translates to: SRSSLGCSSRRS*RTPLTGPGLAA Trigger: TGCTGCCAGCCCAGGACCAGTCAACGGTGTGCGCAAGGATCTGCGGGAGCTACAGCCCAGGGAGCTGCGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS CAA 72 bp | CTGGGCTGTAGCTCCCGCAGATCCTTGCGCACACCGTaGACTGGTCCTGGGCTGGCAGCATGCACCAGTGCT | + |
Preference number: 6 (lower is better) Translates to: LGCSSRRSLRTP*TGPGLAACTSA Trigger: AGCACTGGTGCATGCTGCCAGCCCAGGACCAGTCAACGGTGTGCGCAAGGATCTGCGGGAGCTACAGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS TCA 72 bp | ATGTGGAGCGGATGGGCCGCGGAGCACGCACATCCTTaGGCCCACCAGGAGCTGAAGCTGAGGAGAAGGTGT | + |
Preference number: 6 (lower is better) Translates to: MWSGWAAEHAHP*AHQELKLRRRC Trigger: ACACCTTCTCCTCAGCTTCAGCTCCTGGTGGGCTCAAGGATGTGCGTGCTCCGCGGCCCATCCGCTCCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS CAA 72 bp | GAGAAGGTGTCCTCATCTGTAGACGCAGTGCCGCCCTaGCCCTTGGTCTTCTGCTTGGCGGACAACCGCCTC | + |
Preference number: 6 (lower is better) Translates to: EKVSSSVDAVPP*PLVFCLADNRL Trigger: GAGGCGGTTGTCCGCCAAGCAGAAGACCAAGGGCAAGGGCGGCACTGCGTCTACAGATGAGGACACCTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS TCA 72 bp | CAGCATGCACCAGTGCTTTCACTCGCATCTCCATCTTaGTGCACGTCTCCTCCGAGCTGGTGGGACGCAGCG | + |
Preference number: 6 (lower is better) Translates to: QHAPVLSLASPS*CTSPPSWWDAA Trigger: CGCTGCGTCCCACCAGCTCGGAGGAGACGTGCATCAAGATGGAGATGCGAGTGAAAGCACTGGTGCATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS GCA 72 bp | ACACCTCCATGGGAGAAGACGTATCCAGGCAGCAGCTaGGCGGCCCTTCAAGAGGGCACATCCCGTCATCTA | + |
Preference number: 6 (lower is better) Translates to: TPPWEKTYPGSS*AALQEGTSRHL Trigger: TAGATGACGGGATGTGCCCTCTTGAAGGGCCGCGCAGCTGCTGCCTGGATACGTCTTCTCCCATGGAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS CAA 72 bp | GCAGCATGCACCAGTGCTTTCACTCGCATCTCCATCTaGATGCACGTCTCCTCCGAGCTGGTGGGACGCAGC | + |
Preference number: 6 (lower is better) Translates to: AACTSAFTRISI*MHVSSELVGRS Trigger: GCTGCGTCCCACCAGCTCGGAGGAGACGTGCATCAAGATGGAGATGCGAGTGAAAGCACTGGTGCATGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS CAA 90 bp | TCCTCATCTGTAGACGCAGTGCCGCCCTTGCCCTTGGTCTTCTGCTaGGCGGACAACCGCCTCTTCAAAGTGCCCATCAGGCTCTCGCTT | + |
Preference number: 6 (lower is better) Translates to: SSSVDAVPPLPLVFC*ADNRLFKVPIRLSL Trigger: AAGCGAGAGCCTGATGGGCACTTTGAAGAGGCGGTTGTCCGCCAAGCAGAAGACCAAGGGCAAGGGCGGCACTGCGTCTACAGATGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS GCA 72 bp | TTGCGCACACCGTTGACTGGTCCTGGGCTGGCAGCATaGACCAGTGCTTTCACTCGCATCTCCATCTTGATG | + |
Preference number: 6 (lower is better) Translates to: LRTPLTGPGLAA*TSAFTRISILM Trigger: CATCAAGATGGAGATGCGAGTGAAAGCACTGGTGCATGCTGCCAGCCCAGGACCAGTCAACGGTGTGCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS TCA 72 bp | GCAACCCCAGGCGCAGAGTTGGGATCGAAATTCAAATaGCAGCGAACACTTTCGGCCATGTGCAAGTCTGGG | + |
Preference number: 6 (lower is better) Translates to: ATPGAELGSKFK*QRTLSAMCKSG Trigger: CCCAGACTTGCACATGGCCGAAAGTGTTCGCTGTCATTTGAATTTCGATCCCAACTCTGCGCCTGGGGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 |
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CDS GCA 72 bp | TGGTCTTCTGCTTGGCGGACAACCGCCTCTTCAAAGTaGCCATCAGGCTCTCGCTTTTGGATCTGTTCTTCC | + |
Preference number: 6 (lower is better) Translates to: WSSAWRTTASSK*PSGSRFWICSS Trigger: GGAAGAACAGATCCAAAAGCGAGAGCCTGATGGGCACTTTGAAGAGGCGGTTGTCCGCCAAGCAGAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS CAA 90 bp | TTGGCGGACAACCGCCTCTTCAAAGTGCCCATCAGGCTCTCGCTTTaGGATCTGTTCTTCCCTTTCTCATCCTCGCTGCCAATGTCACAA | + |
Preference number: 6 (lower is better) Translates to: LADNRLFKVPIRLSL*DLFFPFSSSLPMSQ Trigger: TTGTGACATTGGCAGCGAGGATGAGAAAGGGAAGAACAGATCCAAAAGCGAGAGCCTGATGGGCACTTTGAAGAGGCGGTTGTCCGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS GCA 72 bp | CGCTTTTGGATCTGTTCTTCCCTTTCTCATCCTCGCTaGCAATGTCACAACTGGCCATGTCTTTGCCATAAC | + |
Preference number: 6 (lower is better) Translates to: RFWICSSLSHPR*QCHNWPCLCHN Trigger: GTTATGGCAAAGACATGGCCAGTTGTGACATTGGCAGCGAGGATGAGAAAGGGAAGAACAGATCCAAAAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 |
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CDS CCA 72 bp | TCTTCCCTTTCTCATCCTCGCTGCCAATGTCACAACTaGCCATGTCTTTGCCATAACAGCTCCCGAATAAAG | + |
Preference number: 6 (lower is better) Translates to: SSLSHPRCQCHN*PCLCHNSSRIK Trigger: CTTTATTCGGGAGCTGTTATGGCAAAGACATGGCCAGTTGTGACATTGGCAGCGAGGATGAGAAAGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 ENSMUST00000236108.2 |
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CDS TCA 72 bp | TCATCTTTCACGAAGTCACCAGCAAGGGACTGGGGCTaGACCACCATGAACTCAGTTTCGTCTTTGCTTTTA | + |
Preference number: 6 (lower is better) Translates to: SSFTKSPARDWG*TTMNSVSSLLL Trigger: TAAAAGCAAAGACGAAACTGAGTTCATGGTGGTTCAGCCCCAGTCCCTTGCTGGTGACTTCGTGAAAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000070116.12 ENSMUST00000123826.2 ENSMUST00000125362.8 ENSMUST00000145120.3 ENSMUST00000236108.2 |