Pregenerated sensors for SOBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038248Ensembl transcript IDs: ENSMUST00000040275.9
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGAGGGAGGTGGTGAGCTGACCAGCTGGTGTCACTGGATGGCATaGCATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: PEGGGELTSWCHWMA*HGLLHALSPCNVPW Trigger: CCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATCCAGTGACACCAGCTGGTCAGCTCACCACCTCCCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | TTATTTTCCAGTCCCTGTCATCCTCCGGCCTCATCCATAGAGCCTTaGAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTG | + |
|
Preference number: 1 (lower is better) Translates to: LFSSPCHPPASSIEP*RWGEDTYIGPCGGL Trigger: CAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAAGGCTCTATGGATGAGGCCGGAGGATGACAGGGACTGGAAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR CCA 90 bp | AAAAGGAGTTCCCAGAGGGGCGGCTGCTTCCTGCAGGGCGTGGCTTaGTGGTGGGTTGTAGGCTGGTTTAGTTTGTTGTTGGAAGTTTTT | + |
|
Preference number: 1 (lower is better) Translates to: KRSSQRGGCFLQGVA*WWVVGWFSLLLEVF Trigger: AAAAACTTCCAACAACAAACTAAACCAGCCTACAACCCACCACCAAGCCACGCCCTGCAGGAAGCAGCCGCCCCTCTGGGAACTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | AGCTGTGTTATTTGCTTGAGTTTTAGCCAGAGGGAGGTGGTGAGCTaGCCAGCTGGTGTCACTGGATGGCATGACATGGTTTGCTCCACG | + |
|
Preference number: 1 (lower is better) Translates to: SCVICLSFSQREVVS*PAGVTGWHDMVCST Trigger: CGTGGAGCAAACCATGTCATGCCATCCAGTGACACCAGCTGGTCAGCTCACCACCTCCCTCTGGCTAAAACTCAAGCAAATAACACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR GCA 90 bp | GTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTaGCAGTACACATGTTCTAGAGGACTTCTGGACTCGCAGCTACAA | + |
|
Preference number: 1 (lower is better) Translates to: VLIRLGHCTTVSATQ*QYTCSRGLLDSQLQ Trigger: TTGTAGCTGCGAGTCCAGAAGTCCTCTAGAACATGTGTACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | TATTCTACCTCTTCATTTAAAAGTGCATCGTGGGCTGGGCAGAGATaGATCGGAAGCATTGAGAACTCCAGCACCATCCCGTCTCTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: YSTSSFKSASWAGQR*IGSIENSSTIPSLP Trigger: GGGGAGAGACGGGATGGTGCTGGAGTTCTCAATGCTTCCGATTCATCTCTGCCCAGCCCACGATGCACTTTTAAATGAAGAGGTAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | GAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTaGAATTTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCC | + |
|
Preference number: 1 (lower is better) Translates to: EIVSLTSWTTENHQG*NFIQSFLTPSKYSP Trigger: GGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAAATTTCAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR GCA 90 bp | TTGCATCGGCTTGTCCATACCATTCTAATTATCATGAAAGGACTCTaGGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: LHRLVHTILIIMKGL*AERDCLADFLDHRK Trigger: TTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGCAGAGTCCTTTCATGATAATTAGAATGGTATGGACAAGCCGATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | TCTAATTATCATGAAAGGACTCTGCGCAGAGAGAGATTGTCTCGCTaGCTTCCTGGACCACAGAAAACCATCAGGGTTGAAATTTCATCC | + |
|
Preference number: 1 (lower is better) Translates to: SNYHERTLRRERLSR*LPGPQKTIRVEISS Trigger: GGATGAAATTTCAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGCAGAGTCCTTTCATGATAATTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | CTTAACCATGACAGGAGAAAGCAAACAGTGAAACAGAATCCGGGGTaGTCTTTCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATAC | + |
|
Preference number: 1 (lower is better) Translates to: LNHDRRKQTVKQNPG*SFSLSLLFASACPY Trigger: GTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGAAAGATCACCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | AAGTGCACACAAGTAAATCTACCCTGTTATCCTCCACCCACTGATTaGGGATCGAATTGCACATTTCTCTTAACCATGACAGGAGAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: KCTQVNLPCYPPPTD*GSNCTFLLTMTGES Trigger: GCTTTCTCCTGTCATGGTTAAGAGAAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAACAGGGTAGATTTACTTGTGTGCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | GTACAAGTGCACACAAGTAAATCTACCCTGTTATCCTCCACCCACTaGTTGAGGATCGAATTGCACATTTCTCTTAACCATGACAGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: VQVHTSKSTLLSSTH*LRIELHISLNHDRR Trigger: TCTCCTGTCATGGTTAAGAGAAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAACAGGGTAGATTTACTTGTGTGCACTTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 90 bp | TCGAATTGCACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTaGAACAGAATCCGGGGTGATCTTTCTCACTTTCTCTCTTGTTTG | + |
|
Preference number: 1 (lower is better) Translates to: SNCTFLLTMTGESKQ*NRIRGDLSHFLSCL Trigger: CAAACAAGAGAGAAAGTGAGAAAGATCACCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGTGCAATTCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR GCA 90 bp | CGTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTGCCAGTACACGCCCTCTCTCCATaGAATGTACCCTGGGAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: RTHQTGALYDCLSDSVPVHALSP*NVPWER Trigger: TCGCTCCCAGGGTACATTGCATGGAGAGAGGGCGTG...TACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGAGGGAGGTGGTGAGCTaGCCAGCTGGTGTCACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: AERDCLADFLDHRKPSGLREVVS*PAGVTG Trigger: TCCAGTGACACCAGCTGGTCAGCTCACCACCTCCCT...CAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR CAA 90 bp | CTTATTTTCCAGTCCCTGTCATCCTCCGGCCTCATCCATAGAGCCTaGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LIFQSLSSSGLIHRA*KMGRGYLHWSLWRV Trigger: AACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAAGGCTCTATGGATGAGGCCGGAGGATGACAGGGACTGGAAAATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR TCA 90 bp | CACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTGAAACAGAATCCGGGGTGGTGGGCCCGGGCTTaGTGGGTCCAAGACCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HISLNHDRRKQTVKQNPGWWARA*WVQDLL Trigger: CAGCAGGTCTTGGACCCATCAAGCCCGGGCCCACCA...CCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR TCA 90 bp | CGACTGTACAAAGGCGTAGATAGAAATACAGTCTGTACACGCGGACCGCGGCCCGGAGAAAGCAAACAGTaGAACAGAATCCGGGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: RLYKGVDRNTVCTRGPRPGESKQ*NRIRGD Trigger: ATCACCCCGGATTCTGTTTCACTGTTTGCTTTCTCC...GGGCCGCGGTCCGCGTGTACAGACTGTATTTCTATCTACGCCTTTGTACAGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTGGTGTTTTGGCTGGTGTCACTGGATaGCATGACATGGTTTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LKMGRGYLHWSLWRVGVLAGVTG*HDMVCS Trigger: GGAGCAAACCATGTCATGCCATCCAGTGACACCAGC...CAAAACACCAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CCA 90 bp | CGACTGTACAAAGGCGTAGATAGAAATACAGTCTGTACACGCGGACCGCGGCCCGTTCTAGAGGACTTCTaGACTCGCAGCTACAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: RLYKGVDRNTVCTRGPRPVLEDF*TRSYNC Trigger: ACAGTTGTAGCTGCGAGTCCAGAAGTCCTCTAGAAC...GGGCCGCGGTCCGCGTGTACAGACTGTATTTCTATCTACGCCTTTGTACAGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTGGTGTTTTGGCTGTGTTATTTGCTTaGGTTTTAGCCAGAGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LKMGRGYLHWSLWRVGVLAVLFA*VLARGR Trigger: CCTCCCTCTGGCTAAAACTCAAGCAAATAACACAGC...CAAAACACCAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR GCA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTAGTATAAACTATCCATaGTGCTTCCTGCATCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AQREIVSLTSWTTENHQGSINYP*CFLHLA Trigger: TGCCAGATGCAGGAAGCAGCATGGATAGTTTATACT...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CCA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTTTACCGAGTTCTCTTaGCATTCGGTCTCCGTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AQREIVSLTSWTTENHQGFTEFS*HSVSVK Trigger: TTTTACGGAGACCGAATGCCAAGAGAACTCGGTAAA...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR CAA 90 bp | AGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTaGAAATTTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RDCLADFLDHRKPSG*KFHPVFPDAQQIFP Trigger: GGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAAATTTCAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGCTACATTGGTCCTTGTaGCGGGTTGGTGTTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FGLQFNTLALFPNGALFRLHWSL*RVGVLF Trigger: AAACAAAACACCAACCCGCCACAAGGACCAATGTAG...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR CAA 90 bp | TTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACACCTaGAGGGCATTTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: FPDAQQIFPLRLYYT*RAFWSSVQHSCSVP Trigger: GGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAAATGCCCTCAAGGTGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR GCA 90 bp | ACATTTACCGAGTTCTCTTGGCATTCGGTCTCCGTAAAACCACAGTATAAACTATGGCATGACATGGTTTaGTCCACGCCCTCTCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TFTEFSWHSVSVKPQYKLWHDMV*STPSLH Trigger: ATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCA...TAGTTTATACTGTGGTTTTACGGAGACCGAATGCCAAGAGAACTCGGTAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATACCATTCTAATTATCATGTCAGTTCAACACTCTTaGTCTGTTCCCAAATGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SHFLSCLHRLVHTILIIMSVQHS*SVPKWG Trigger: GCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGA...CATGATAATTAGAATGGTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACAGTCCTTGTGGCGGGTTaGTGTTTTGTTTTGCTATTT | + |
|
Preference number: 2 (lower is better) Translates to: FIQSFLTPSKYSPSDYITVLVAG*CFVLLF Trigger: AAATAGCAAAACAAAACACCAACCCGCCACAAGGAC...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATACCATTCTAATTATCATGATCCATGCTGCTTCCTaGATCTGGCAGATTGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SHFLSCLHRLVHTILIIMIHAAS*IWQIEN Trigger: ATTTTCAATCTGCCAGATGCAGGAAGCAGCATGGAT...CATGATAATTAGAATGGTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATACCATTCTAATTATGAAAACCATCAGGGTTaGAATTTCATCCAGTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SFSLSLLFASACPYHSNYENHQG*NFIQSF Trigger: GAAAGACTGGATGAAATTTCAACCCTGATGGTTTTC...ATAATTAGAATGGTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 72 bp | CCTCCTGCCCTCCCGCCGCGTCTGTCACCCTCCTGCTaGGGCTCTGTGGCCTGGAGGGGCGGGGCACCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPALPPRLSPSC*GSVAWRGGAPG Trigger: TCCAGGTGCCCCGCCCCTCCAGGCCACAGAGCCTCAGCAGGAGGGTGACAGACGCGGCGGGAGGGCAGGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR GCA 72 bp | AGAAATACAGTCTGTACACGCGGACCGCGGCCCCAGTaGAGCCGTAAAGCCCCTCCTGCCCTCCCGCCGCGT | + |
|
Preference number: 3 (lower is better) Translates to: RNTVCTRGPRPQ*SRKAPPALPPR Trigger: ACGCGGCGGGAGGGCAGGAGGGGCTTTACGGCTGCACTGGGGCCGCGGTCCGCGTGTACAGACTGTATTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR GCA 72 bp | CGACGCAGCAGGAAAAGGAGTTCCCAGAGGGGCGGCTaGTTCCTGCAGGGCGTGGCTTGGTGGTGGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RRSRKRSSQRGG*FLQGVAWWWVV Trigger: TACAACCCACCACCAAGCCACGCCCTGCAGGAAGCAGCCGCCCCTCTGGGAACTCCTTTTCCTGCTGCGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGCTGGCTTCTCCGGCCTaGAGGCCACCAGGGAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FGLQFNTLALFPNGALFRLASPA*RPPGRA Trigger: GGCTCTCCCTGGTGGCCTCAAGGCCGGAGAAGCCAG...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 72 bp | GGTGGTGAGCTGACCAGCTGGTGTCACTGGATGGCATaGCATGGTTTGCTCCACGCCCTCTCTCCATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GGELTSWCHWMA*HGLLHALSPCN Trigger: ATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATCCAGTGACACCAGCTGGTCAGCTCACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 72 bp | AGTCCCTGTCATCCTCCGGCCTCATCCATAGAGCCTTaGAGATGGGGCGAGGATACCTACATTGGTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPCHPPASSIEP*RWGEDTYIGPC Trigger: ACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAAGGCTCTATGGATGAGGCCGGAGGATGACAGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR GCA 72 bp | AGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTaGCAGTACACATGTTCTAGAGGACTTCTGGACTCG | + |
|
Preference number: 3 (lower is better) Translates to: RLGHCTTVSATQ*QYTCSRGLLDS Trigger: CGAGTCCAGAAGTCCTCTAGAACATGTGTACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CAA 90 bp | CGACTGTACAAAGGCGTAGATAGAAATACAGTCTGTACACGCGGACCGCGGCCCAGCTGTGTTATTTGCTaGAGTTTTAGCCAGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLYKGVDRNTVCTRGPRPSCVIC*SFSQRE Trigger: CTCCCTCTGGCTAAAACTCAAGCAAATAACACAGCT...GGGCCGCGGTCCGCGTGTACAGACTGTATTTCTATCTACGCCTTTGTACAGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTCACCTTGAGGGCATTTaGGTCTTCAGTTCAACACTC | + |
|
Preference number: 3 (lower is better) Translates to: AQREIVSLTSWTTENHQGHLEGI*VFSSTL Trigger: GAGTGTTGAACTGAAGACCAAAATGCCCTCAAGGTG...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 72 bp | ATTTGCTTGAGTTTTAGCCAGAGGGAGGTGGTGAGCTaGCCAGCTGGTGTCACTGGATGGCATGACATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ICLSFSQREVVS*PAGVTGWHDMV Trigger: AACCATGTCATGCCATCCAGTGACACCAGCTGGTCAGCTCACCACCTCCCTCTGGCTAAAACTCAAGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 72 bp | TCTTCATTTAAAAGTGCATCGTGGGCTGGGCAGAGATaGATCGGAAGCATTGAGAACTCCAGCACCATCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SSFKSASWAGQR*IGSIENSSTIP Trigger: CGGGATGGTGCTGGAGTTCTCAATGCTTCCGATTCATCTCTGCCCAGCCCACGATGCACTTTTAAATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR CCA 72 bp | CGACTCAGTGCCAGTACACATGTTCTAGAGGACTTCTaGACTCGCAGCTACAACTGTACAAGTGCACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RLSASTHVLEDF*TRSYNCTSAHK Trigger: CTTGTGTGCACTTGTACAGTTGTAGCTGCGAGTCCAGAAGTCCTCTAGAACATGTGTACTGGCACTGAGTCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 72 bp | TCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTaGAATTTCATCCAGTCTTTCCTGACGCCCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLTSWTTENHQG*NFIQSFLTPSK Trigger: TTTGCTGGGCGTCAGGAAAGACTGGATGAAATTTCAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR CCA 72 bp | TTCCCCCTCAGATTATATTACACCTTGAGGGCATTTTaGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FPLRLYYTLRAF*SSVQHSCSVPK Trigger: TTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAAATGCCCTCAAGGTGTAATATAATCTGAGGGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACATGGCGGGTTGGTGTTTaGTTTTGCTATTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FIQSFLTPSKYSPSDYITWRVGV*FCYLLL Trigger: CAACAACAAATAGCAAAACAAAACACCAACCCGCCA...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR TCA 72 bp | ACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTaGAACAGAATCCGGGGTGATCTTTCTCACTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TFLLTMTGESKQ*NRIRGDLSHFL Trigger: GAGAAAGTGAGAAAGATCACCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCTGCTGGCTTCTCCGGCGCATGGGCGAGGAGATaGCGCACGGCGTCATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGMVGPGLMGPRPAGFSGAWARR*RTASWQ Trigger: CTGCCATGACGCCGTGCGTCATCTCCTCGCCCATGC...GCCGGAGAAGCCAGCAGGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCTGCTGGCTTCTCCGGCTTGGGGTTGGAGGCGTaGTGCGGTGGTCCGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGMVGPGLMGPRPAGFSGLGLEA*CGGPRM Trigger: CATCCGCGGACCACCGCACCACGCCTCCAACCCCAA...GCCGGAGAAGCCAGCAGGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | CGTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTGCCAGTAGGAGGCGTGGTGCGGTaGTCCGCGGATGAAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RTHQTGALYDCLSDSVPVGGVVR*SADEGR Trigger: CCGCCCTTCATCCGCGGACCACCGCACCACGCCTCC...TACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTGAGGGAAGGGAAGGCTaGGCAAGGGCGCGCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQREIVSLTSWTTENHQGEGREG*ARARPG Trigger: CCCCGGGCGCGCCCTTGCCCAGCCTTCCCTTCCCTC...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | ACTCTAGATGAAGTGGGCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCTCTGGCGTGAGCAGCTaGACCCCGGTGCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLDEVGRNGGPGLDGSKTSGVSS*TPVPSA Trigger: AGCAGAAGGCACCGGGGTGCAGCTGCTCACGCCAGA...GGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGCCCACTTCATCTAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGCAGTGGCCGTCCCTaGAGCCGCCGCAGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQREIVSLTSWTTENHQGCSGRP*SRRRSC Trigger: GCAGGACCTGCGGCGGCTGCAGGGACGGCCACTGCA...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTGCCAGGCTCAGAGCCTaGCCGGAGCTTCCGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQREIVSLTSWTTENHQGARLRA*PELPGG Trigger: GCCACCCGGAAGCTCCGGCCAGGCTCTGAGCCTGGC...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | CGACTGTACAAAGGCGTAGATAGAAATACAGTCTGTACACGCGGACCGCGGCCCTGCAGCCGGGCTCGGTaGCCCACGGTCAGGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLYKGVDRNTVCTRGPRPCSRAR*PTVRSM Trigger: CATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCA...GGGCCGCGGTCCGCGTGTACAGACTGTATTTCTATCTACGCCTTTGTACAGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTCGATGACGCCGTCCTaGGGGCCGTGCAACACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQREIVSLTSWTTENHQGSMTPS*GPCNTP Trigger: GGGCGTGTTGCACGGCCCGCAGGACGGCGTCATCGA...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAGCCGGTGCATGGGGCTaGAAGTGGGGCCTAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGMTWFAPRPLSMQCTLGAGAWG*KWGLGS Trigger: GGAACCTAGGCCCCACTTCCAGCCCCATGCACCGGC...TCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | CTCATCCATAGAGCCTTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGGGGTGCCGTTCACGATaGCGTTGCAGGCGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIHRALKMGRGYLHWSLWGCRSR*RCRRQR Trigger: CCGCTGCCGCCTGCAACGTCATCGTGAACGGCACCC...CCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAAGGCTCTATGGATGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAGCGAGTGTCGTCCGCGGGGTTATTaGGGTTCGGGTCCGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DMVCSTPSLHAMYPGSECRPRGY*GSGPTC Trigger: ACAAGTCGGACCCGAACCTCAATAACCCCGCGGACG...ACACTCGCTCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | CGACTGTACAAAGGCGTAGATAGAAATACAGTCTGTACACGCGGACCGCGGCCCAGGCGGGACACCCAGTaGAGGTCCGATGCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLYKGVDRNTVCTRGPRPRRDTQ*RSDASR Trigger: CCTGCTAGCATCGGACCTCCACTGGGTGTCCCGCCT...GGGCCGCGGTCCGCGTGTACAGACTGTATTTCTATCTACGCCTTTGTACAGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGGCTCGCGCTCCGCCTTaGCGTGAGCGTGCAGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGLQFNTLALFPNGALFRARAPP*RERAAH Trigger: GTGCGCTGCACGCTCACGTCAAGGCGGAGCGCGAGC...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCTGCTGGCTTCTCCGGCAGAACAGAAATGTGTTaGCGGCTTTCTCCATCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGMVGPGLMGPRPAGFSGRTEMC*RLSPSV Trigger: TACGGATGGAGAAAGCCGGCAACACATTTCTGTTCT...GCCGGAGAAGCCAGCAGGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | CGTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTGCCAGTAGAGGGTGGAGTGTGCTaGACAGCCCGGCTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTHQTGALYDCLSDSVPVEGGVC*TARLED Trigger: ATCTTCCAGCCGGGCTGTGCAGCACACTCCACCCTC...TACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTGGTGTTTTGTGTGGGGCGATAGCATaGGCCGGTGCATGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKMGRGYLHWSLWRVGVLCGAIA*AGAWGW Trigger: CCAGCCCCATGCACCGGCCCATGCTATCGCCCCACA...CAAAACACCAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGTGGAAGAGCCCTGCTTaGAGTCCCGCGGGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AERDCLADFLDHRKPSGLWKSPA*SPAGTG Trigger: CCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCA...CAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAGCTTCCCCGTCCAGGTaGCAGTTGGAAGCGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DGMTWFAPRPLSMQCTLGASPSR*QLEAQL Trigger: CAACTGCGCTTCCAACTGCCACCTGGACGGGGAAGC...TCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTCGGTCTCCGTAAAACCACAGTATAAACTATCCATGCTGCTTCCTGCACCACGGTCAGGTCGATaGCGCCGTCCTGCGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WHSVSVKPQYKLSMLLPAPRSGR*RRPAGR Trigger: ACGGCCCGCAGGACGGCGTCATCGACCTGACCGTGG...TGCAGGAAGCAGCATGGATAGTTTATACTGTGGTTTTACGGAGACCGAATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGTCACTGGATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAGATATTCCAAGAGTCTaGCGTGAGCAGCTGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGVTGWHDMVCSTPSLHADIPRV*REQLHP Trigger: GGGGTGCAGCTGCTCACGCCAGACTCTTGGAATATC...TGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATCCAGTGACACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGTCACTGGATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAGAGGGACTTGGGCACTaGCGTGGGGATTTTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGVTGWHDMVCSTPSLHAEGLGH*RGDFSD Trigger: GTCACTAAAATCCCCACGCCAGTGCCCAAGTCCCTC...TGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATCCAGTGACACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAGCGAGTGTGGCGGGCGGATCTGCTaGATAATTTGCTGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DMVCSTPSLHAMYPGSECGGRIC*IICCSM Trigger: CATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCC...ACACTCGCTCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | CGTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTGCCAGTACAGCAGGTGAGTCACTaGGTCCATTCCCAGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTHQTGALYDCLSDSVPVQQVSH*VHSQWQ Trigger: TTGCCACTGGGAATGGACTCAGTGACTCACCTGCTG...TACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGTCACTGGATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAGCCCGGCTGGAAGATTaGCCTGTGTCTCTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGVTGWHDMVCSTPSLHAARLED*PVSLCR Trigger: TCTACAAAGAGACACAGGCCAATCTTCCAGCCGGGC...TGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATCCAGTGACACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | CACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTGAAACAGAATCCGGGGCCGGGGCCCTGGCTTTaGCCAGCTGCAGTCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HISLNHDRRKQTVKQNPGPGPWL*PAAVTG Trigger: CCCCGTGACTGCAGCTGGCCAAAGCCAGGGCCCCGG...CCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGGGTGGTGGACGAGGATaGGCCGGGGCCCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEPLPPRCLMTGSCVICLGGGRG*AGALAL Trigger: CAAAGCCAGGGCCCCGGCCCATCCTCGTCCACCACC...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGGCATGGGGCTGGAAGTaGGGCCTAGGTTCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FGLQFNTLALFPNGALFRAWGWK*GLGSWG Trigger: GCCCCAGGAACCTAGGCCCCACTTCCAGCCCCATGC...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTGGTGTTTTGCCGAAGTTCATCATCTaGGGAACCGGCATCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKMGRGYLHWSLWRVGVLPKFII*GTGIGP Trigger: CGGCCCGATGCCGGTTCCCCAGATGATGAACTTCGG...CAAAACACCAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTGGTGTTTTGTCACGCAGCCGGTCTTaGGCAGCATCCGCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKMGRGYLHWSLWRVGVLSRSRS*AASAEH Trigger: ATGCTCTGCGGATGCTGCCCAAGACCGGCTGCGTGA...CAAAACACCAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAGCGAGTGTTCTTCATCTCCTCGTTaGTCTCCCTCTTCACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DMVCSTPSLHAMYPGSECSSSPR*SPSSQG Trigger: ACCCTGTGAAGAGGGAGATCAACGAGGAGATGAAGA...ACACTCGCTCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGTCCAAGAGTCTGGCGTaGGCAGCTGCACCCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEPLPPRCLMTGSCVICLSKSLA*AAAPRC Trigger: GCACCGGGGTGCAGCTGCTCACGCCAGACTCTTGGA...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCTGCTGGCTTCTCCGGCATTCATGGTGTTTTCTaGAAAGTTCTTCATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGMVGPGLMGPRPAGFSGIHGVF*KVLHLL Trigger: GAGGAGATGAAGAACTTTGCAGAAAACACCATGAAT...GCCGGAGAAGCCAGCAGGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | CGACTGTACAAAGGCGTAGATAGAAATACAGTCTGTACACGCGGACCGCGGCCCCACCCCGGTGCCTTCTaGTTTACTTTCCATGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLYKGVDRNTVCTRGPRPHPGAF*FTFHVR Trigger: CCTCACATGGAAAGTAAAGCAGAAGGCACCGGGGTG...GGGCCGCGGTCCGCGTGTACAGACTGTATTTCTATCTACGCCTTTGTACAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | ACATTTACCGAGTTCTCTTGGCATTCGGTCTCCGTAAAACCACAGTATAAACTACCGTCCTGCGGGCCGTaGAACACGCCCGCGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TFTEFSWHSVSVKPQYKLPSCGP*NTPAKP Trigger: GGGCTTCGCGGGCGTGTTGCACGGCCCGCAGGACGG...TAGTTTATACTGTGGTTTTACGGAGACCGAATGCCAAGAGAACTCGGTAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TGGCATTCGGTCTCCGTAAAACCACAGTATAAACTATCCATGCTGCTTCCTGCAGATGGGCAGGGGCACTaGGCCGCGGTTGGTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: WHSVSVKPQYKLSMLLPADGQGH*AAVGHH Trigger: GTGATGACCAACCGCGGCCCAGTGCCCCTGCCCATC...TGCAGGAAGCAGCATGGATAGTTTATACTGTGGTTTTACGGAGACCGAATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTGGTGTTTTGGCGAGTCGGCTGACTTaGAAGAGCCCTGCTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKMGRGYLHWSLWRVGVLASRLT*KSPAWS Trigger: ACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGC...CAAAACACCAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTAGATGAAGTGGGCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCGTTCGCAGTTATTCTTaGAGGCAAGCCTTGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLDEVGRNGGPGLDGSKTVRSYS*RQALEF Trigger: AAACTCCAAGGCTTGCCTTCAAGAATAACTGCGAAC...GGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGCCCACTTCATCTAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGGGGTGGCGAGTCGGCTaGCTTGGAAGAGCCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEPLPPRCLMTGSCVICLGWRVG*LGRALL Trigger: AAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCC...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTCGGTCTCCGTAAAACCACAGTATAAACTATCCATGCTGCTTCCTGCAGGAGGCACCTCCTTTTaGGCGGAGGCTCCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WHSVSVKPQYKLSMLLPAGGTSF*AEAPGP Trigger: AGGACCTGGAGCCTCCGCTCAAAAGGAGGTGCCTCC...TGCAGGAAGCAGCATGGATAGTTTATACTGTGGTTTTACGGAGACCGAATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGGCAGCTGCACCCCGGTaGCTTCTGCTTTACTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AERDCLADFLDHRKPSGLAAAPR*LLLYFP Trigger: TGGAAAGTAAAGCAGAAGGCACCGGGGTGCAGCTGC...CAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | TTTAAACCAGCGAAATCCCTAAGTTCTTCTGGGGAGACTCTAGATGAAGTGGGCGACTTGGAAGAGCCCTaGTTGGAGTCCCGCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKPAKSLSSSGETLDEVGDLEEP*LESRGD Trigger: GTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTC...GCCCACTTCATCTAGAGTCTCCCCAGAAGAACTTAGGGATTTCGCTGGTTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGCCCAGTGGCAAGGCCTaGGTAGCCTGTGCTTATATT | + |
|
Preference number: 4 (lower is better) Translates to: AERDCLADFLDHRKPSGLPSGKA*VACAYI Trigger: AATATAAGCACAGGCTACTCAGGCCTTGCCACTGGG...CAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAAGCTGAGAAGAATAAACATTTACCGAGTTCTCTTGGCATTCGGTCTCCGCTCCGCCTTGACGTaGGCGTGCAGCGCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRKLRRINIYRVLLAFGLRSALT*ACSARC Trigger: ACACCGTGCGCTGCACGCTCACGTCAAGGCGGAGCG...GAGACCGAATGCCAAGAGAACTCGGTAAATGTTTATTCTTCTCAGCTTTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACACTGGCTTTGGCCAGCTaGAGTCACGGGGGAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIQSFLTPSKYSPSDYITLALAS*SHGGRG Trigger: GCCCCTTCCCCCGTGACTGCAGCTGGCCAAAGCCAG...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAGCGAGTGTATCTGCTGGATAATTTaGTGCTCCATGAAGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DMVCSTPSLHAMYPGSECICWII*CSMKMG Trigger: GCCCATCTTCATGGAGCAGCAAATTATCCAGCAGAT...ACACTCGCTCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACAGGGTTGGAGGCGTGGTaGGGTGGTCCGCGGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIQSFLTPSKYSPSDYITGLEAW*GGPRMK Trigger: CTTCATCCGCGGACCACCGCACCACGCCTCCAACCC...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACACGGTGTATCACGTTGTaGAGCCGGGCTCGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FIQSFLTPSKYSPSDYITRCITL*SRARWP Trigger: GGGCCACCGAGCCCGGCTGCACAACGTGATACACCG...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGGTTGGCAGTGTCAGATaGAGAAACGGTGGTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: AERDCLADFLDHRKPSGLVGSVR*RNGGGR Trigger: TCGTCCACCACCGTTTCTCCATCTGACACTGCCAAC...CAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | CACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTGAAACAGAATCCGGGGGGTTGGTCATCACCATaGGAGGGCTGCGAGGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HISLNHDRRKQTVKQNPGGWSSP*EGCEAG Trigger: TCCCGCCTCGCAGCCCTCCCATGGTGATGACCAACC...CCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTTAAACCAGCGAAATCCCTAAGTTCTTCTGGGGAGACTCTAGATGAAGTGGGCCAGGGGCACTATCACTaGGTACGGCACGAGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FKPAKSLSSSGETLDEVGQGHYH*VRHEQR Trigger: ACGCTGCTCGTGCCGTACCCAGTGATAGTGCCCCTG...GCCCACTTCATCTAGAGTCTCCCCAGAAGAACTTAGGGATTTCGCTGGTTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGCTGGAAAATCCGTTaGGGGGCTTGGAATCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQREIVSLTSWTTENHQGCWKIR*GAWNRS Trigger: TGAACGATTCCAAGCCCCCCAACGGATTTTCCAGCA...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGGGTTTTGGCACAGGCTaGATCACGCAGCCGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQFNTLALFPNGALFRGFGTG*ITQPVL Trigger: CAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACC...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGCTTCTCCGCGGGTTTTaGCACAGGCTGGATCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGLQFNTLALFPNGALFRLLRGF*HRLDHA Trigger: TGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAG...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGTTTGCACTGCAGAACTaGAGCCTTCTCTCCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGLQFNTLALFPNGALFRFALQN*SLLSPS Trigger: GGACGGGGAGAGAAGGCTTCAGTTCTGCAGTGCAAA...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATACCATTCTAATTATGCGGTGGTCCGCGGATaGAGGGCGGGCGGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSLSLLFASACPYHSNYAVVRG*RAGGSA Trigger: AGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGC...ATAATTAGAATGGTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | CGTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTGCCAGTACTTGAAGGCAAGCCTTaGAGTTTCCTTAGCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTHQTGALYDCLSDSVPVLEGKP*SFLSIV Trigger: CACTATGCTAAGGAAACTCCAAGGCTTGCCTTCAAG...TACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACATCCGATGCTAGCAGGTaGCTGGACCGAGACGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIQSFLTPSKYSPSDYITSDASR*LDRDGR Trigger: CCTCCCGTCTCGGTCCAGCCACCTGCTAGCATCGGA...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | ACATTTACCGAGTTCTCTTGGCATTCGGTCTCCGTAAAACCACAGTATAAACTAGCACTGGGCCGCGGTTaGTCATCACCATGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFTEFSWHSVSVKPQYKLALGRG*SSPWEG Trigger: GCCCTCCCATGGTGATGACCAACCGCGGCCCAGTGC...TAGTTTATACTGTGGTTTTACGGAGACCGAATGCCAAGAGAACTCGGTAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | CACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTGAAACAGAATCCGGGGCGGCATCGGGCCGTTTaGCATCATGCTAACCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HISLNHDRRKQTVKQNPGRHRAV*HHANRR Trigger: CCTCCGGTTAGCATGATGCCAAACGGCCCGATGCCG...CCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACAGCTGCACAGCCCGGCTaGAAGATTGGCCTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIQSFLTPSKYSPSDYITAAQPG*KIGLCL Trigger: GAGACACAGGCCAATCTTCCAGCCGGGCTGTGCAGC...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATACCATTCTAATTATGATGGGCCGGGGCCCTaGCTTTGGCCAGCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFSLSLLFASACPYHSNYDGPGP*LWPAAV Trigger: GACTGCAGCTGGCCAAAGCCAGGGCCCCGGCCCATC...ATAATTAGAATGGTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| 3UTR CAA 72 bp | CTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTaGAAATTTCATCCAGTCTTTCCTGACGCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LADFLDHRKPSG*KFHPVFPDAQQ Trigger: TTGCTGGGCGTCAGGAAAGACTGGATGAAATTTCAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGTCACTGGATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCACCATTTTGTATTGATTaGGACATTTTGCACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGVTGWHDMVCSTPSLHAPFCID*DILHCR Trigger: TCTGCAGTGCAAAATGTCTCAATCAATACAAAATGG...TGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATCCAGTGACACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTCGGTCTCCGTAAAACCACAGTATAAACTATCCATGCTGCTTCCTGCAGCTTTACTTTCCATGTaGGGGTGGAGTGTGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WHSVSVKPQYKLSMLLPAALLSM*GWSVLH Trigger: GTGCAGCACACTCCACCCTCACATGGAAAGTAAAGC...TGCAGGAAGCAGCATGGATAGTTTATACTGTGGTTTTACGGAGACCGAATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGATAGGCACATTGCCATaGTCCTTTGACCCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGLQFNTLALFPNGALFRIGTLP*SFDPAG Trigger: ACCTGCTGGGTCAAAGGACCATGGCAATGTGCCTAT...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAAGCTGAGAAGAATAAACATTTACCGAGTTCTCTTGGCATTCGGTCTCATGCTAGCAGGTGGCTaGACCGAGACGGGAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KRKLRRINIYRVLLAFGLMLAGG*TETGGM Trigger: CATCCCTCCCGTCTCGGTCCAGCCACCTGCTAGCAT...GAGACCGAATGCCAAGAGAACTCGGTAAATGTTTATTCTTCTCAGCTTTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | TTCATCCAGTCTTTCCTGACGCCCAGCAAATATTCCCCCTCAGATTATATTACATCAGGGAATAGCGCTTaGTCCCCACTTTCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FIQSFLTPSKYSPSDYITSGNSA*SPLSGT Trigger: GGTGCCAGAAAGTGGGGATCAAGCGCTATTCCCTGA...TGTAATATAATCTGAGGGGGAATATTTGCTGGGCGTCAGGAAAGACTGGATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAAGCTGAGAAGAATAAACATTTACCGAGTTCTCTTGGCATTCGGTCTCTGGACAAGGGACTATTaGGGTTGGAGGCGTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRKLRRINIYRVLLAFGLWTRDY*GWRRGA Trigger: CGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCA...GAGACCGAATGCCAAGAGAACTCGGTAAATGTTTATTCTTCTCAGCTTTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAAGCTGAGAAGAATAAACATTTACCGAGTTCTCTTGGCATTCGGTCTCCCGGGAGCATGGGGTTaGACAAGGGACTATTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRKLRRINIYRVLLAFGLPGAWG*TRDYWG Trigger: ACCCCAATAGTCCCTTGTCCAACCCCATGCTCCCGG...GAGACCGAATGCCAAGAGAACTCGGTAAATGTTTATTCTTCTCAGCTTTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGGCTTATATTGTAAGATaGAATAACACTGTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AERDCLADFLDHRKPSGLAYIVR*NNTVLR Trigger: CCGGAGGACAGTGTTATTTCATCTTACAATATAAGC...CAACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GTACGACTGTCTCAGCGACTCAGTGCCAGTACACATGTTCTAGAGGACTTCTGGGGCCTGAGTAGCCTGTaGTTATATTGTAAGATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRLSQRLSASTHVLEDFWGLSSL*LYCKMK Trigger: TTTCATCTTACAATATAAGCACAGGCTACTCAGGCC...CCAGAAGTCCTCTAGAACATGTGTACTGGCACTGAGTCGCTGAGACAGTCGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | TGGCATTCGGTCTCCGTAAAACCACAGTATAAACTATCCATGCTGCTTCCTGCACAAAGCATTTCTCGCTaGAGAAGCTTTTCACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WHSVSVKPQYKLSMLLPAQSISR*RSFSPR Trigger: GCGAGGTGAAAAGCTTCTGCAGCGAGAAATGCTTTG...TGCAGGAAGCAGCATGGATAGTTTATACTGTGGTTTTACGGAGACCGAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | TTTAAACCAGCGAAATCCCTAAGTTCTTCTGGGGAGACTCTAGATGAAGTGGGCTGCTGGATAATTTGCTaGTCCATGAAGATGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKPAKSLSSSGETLDEVGCWIIC*SMKMGR Trigger: CCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCA...GCCCACTTCATCTAGAGTCTCCCCAGAAGAACTTAGGGATTTCGCTGGTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGCACATCATCTTCTGCTaGCGGCTTTATGAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEPLPPRCLMTGSCVICLHIIFC*RLYERW Trigger: CCACCTTTCATAAAGCCGCCAGCAGAAGATGATGTG...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | TCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATACCATTCTAATTATCATGAAGGGCGGGCGGATCTaGTGGATAATTTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHFLSCLHRLVHTILIIMKGGRI*WIICCS Trigger: GGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTT...CATGATAATTAGAATGGTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGTTGATTGAGACATTTTaGACTGCAGAACTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEPLPPRCLMTGSCVICLLIETF*TAELKP Trigger: AGGCTTCAGTTCTGCAGTGCAAAATGTCTCAATCAA...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | GCAACACGCCCGCGAAGCCCGGCTGGCCTCCCGCACCCGCGGGGCTaGCTGCGCGCCGGGTCAGGTCCACCACCTCCCCACGACCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATRPRSPAGLPHPRG*LRAGSGPPPPHDRA Trigger: AGCGCGGTCGTGGGGAGGTGGTGGACCTGACCCGGCGCGCAGGCAGCCCCGCGGGTGCGGGAGGCCAGCCGGGCTTCGCGGGCGTGTTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | ATGACGCCGTCCTGCGGGCCGTGCAACACGCCCGCGAAGCCCGGCTaGCCTCCCGCACCCGCGGGGCTGCCTGCGCGCCGGGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MTPSCGPCNTPAKPG*PPAPAGLPARRVRS Trigger: GGACCTGACCCGGCGCGCAGGCAGCCCCGCGGGTGCGGGAGGCCAGCCGGGCTTCGCGGGCGTGTTGCACGGCCCGCAGGACGGCGTCAT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | GCTCGGTGGCCCACGGTCAGGTCGATGACGCCGTCCTGCGGGCCGTaGAACACGCCCGCGAAGCCCGGCTGGCCTCCCGCACCCGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARWPTVRSMTPSCGP*NTPAKPGWPPAPAG Trigger: CCCCGCGGGTGCGGGAGGCCAGCCGGGCTTCGCGGGCGTGTTGCACGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | TGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATGACGCCGTCCTaGGGGCCGTGCAACACGCCCGCGAAGCCCGGCTGGCCTCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSRARWPTVRSMTPS*GPCNTPAKPGWPPA Trigger: TGCGGGAGGCCAGCCGGGCTTCGCGGGCGTGTTGCACGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | CGCCGCAGGTCCTGCGCTCCGCGGCTCCCGGCTCGCGCTCCGCCTTaGCGTGAGCGTGCAGCGCACGGTGTATCACGTTGTGCAGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRSCAPRLPARAPP*RERAAHGVSRCAAG Trigger: CCCGGCTGCACAACGTGATACACCGTGCGCTGCACGCTCACGTCAAGGCGGAGCGCGAGCCGGGAGCCGCGGAGCGCAGGACCTGCGGCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | ACCACCTCCCCACGACCGCGCTCCGCGGGCGCCAGGCTCAGAGCCTaGCCGGAGCTTCCGGGTGGCGAGTCGGCTGACTTGGAAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTSPRPRSAGARLRA*PELPGGESADLEEP Trigger: GGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGGCTCTGAGCCTGGCGCCCGCGGAGCGCGGTCGTGGGGAGGTGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | CCGCGGGGACAGGGAGCGTCCACCAGCCTTGCCTCCCGCCGCCGATaGGTCGCCCGGAGCGCTCGGAACGAAGCTCTCCCCGTTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRGQGASTSLASRRR*VARSARNEALPVAG Trigger: TCCAGCAACGGGGAGAGCTTCGTTCCGAGCGCTCCGGGCGACTCATCGGCGGCGGGAGGCAAGGCTGGTGGACGCTCCCTGTCCCCGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | CAGGTCCTGCGCTCCGCGGCTCCCGGCTCGCGCTCCGCCTTGACGTaGGCGTGCAGCGCACGGTGTATCACGTTGTGCAGCCGGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVLRSAAPGSRSALT*ACSARCITLCSRAR Trigger: CCGAGCCCGGCTGCACAACGTGATACACCGTGCGCTGCACGCTCACGTCAAGGCGGAGCGCGAGCCGGGAGCCGCGGAGCGCAGGACCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | CGCCAGGCTCAGAGCCTGGCCGGAGCTTCCGGGTGGCGAGTCGGCTaGCTTGGAAGAGCCCTGCTTGGAGTCCCGCGGGGACAGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RQAQSLAGASGWRVG*LGRALLGVPRGQGA Trigger: CGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGGCTCTGAGCCTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | GTATCACGTTGTGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATaGCGCCGTCCTGCGGGCCGTGCAACACGCCCGCGAAGCCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSRCAAGLGGPRSGR*RRPAGRATRPRSPA Trigger: AGCCGGGCTTCGCGGGCGTGTTGCACGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | CGGAGCTTCCGGGTGGCGAGTCGGCTGACTTGGAAGAGCCCTGCTTaGAGTCCCGCGGGGACAGGGAGCGTCCACCAGCCTTGCCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSFRVASRLTWKSPA*SPAGTGSVHQPCLP Trigger: CGGGAGGCAAGGCTGGTGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | GGCTCAGAGCCTGGCCGGAGCTTCCGGGTGGCGAGTCGGCTGACTTaGAAGAGCCCTGCTTGGAGTCCCGCGGGGACAGGGAGCGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSEPGRSFRVASRLT*KSPAWSPAGTGSVH Trigger: GTGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGGCTCTGAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | TGGCCGGAGCTTCCGGGTGGCGAGTCGGCTGACTTGGAAGAGCCCTaGTTGGAGTCCCGCGGGGACAGGGAGCGTCCACCAGCCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WPELPGGESADLEEP*LESRGDRERPPALP Trigger: AGGCAAGGCTGGTGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | CTGCGAGGCGGGACACCCAGTGGAGGTCCGATGCTAGCAGGTGGCTaGACCGAGACGGGAGGGATGCTCGGAGTCTCGCTGATGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRGGTPSGGPMLAGG*TETGGMLGVSLMGR Trigger: CCTCCCCATCAGCGAGACTCCGAGCATCCCTCCCGTCTCGGTCCAGCCACCTGCTAGCATCGGACCTCCACTGGGTGTCCCGCCTCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | AGGGCTGCGAGGCGGGACACCCAGTGGAGGTCCGATGCTAGCAGGTaGCTGGACCGAGACGGGAGGGATGCTCGGAGTCTCGCTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAARRDTQWRSDASR*LDRDGRDARSLADG Trigger: CCCATCAGCGAGACTCCGAGCATCCCTCCCGTCTCGGTCCAGCCACCTGCTAGCATCGGACCTCCACTGGGTGTCCCGCCTCGCAGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | GCGGTTGGTCATCACCATGGGAGGGCTGCGAGGCGGGACACCCAGTaGAGGTCCGATGCTAGCAGGTGGCTGGACCGAGACGGGAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVGHHHGRAARRDTQ*RSDASRWLDRDGRD Trigger: ATCCCTCCCGTCTCGGTCCAGCCACCTGCTAGCATCGGACCTCCACTGGGTGTCCCGCCTCGCAGCCCTCCCATGGTGATGACCAACCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | GGCGGCACCAGCGGGGCCAGCGAAGGCAGCCCGAAGTTCATCATCTaGGGAACCGGCATCGGGCCGTTTGGCATCATGCTAACCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGTSGASEGSPKFII*GTGIGPFGIMLTGG Trigger: CCCTCCGGTTAGCATGATGCCAAACGGCCCGATGCCGGTTCCCCAGATGATGAACTTCGGGCTGCCTTCGCTGGCCCCGCTGGTGCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | CCTTCTCCGCGGGTTTTGGCACAGGCTGGATCACGCAGCCGGTCTTaGGCAGCATCCGCAGAGCATAGGCGTGGTCCTCGTCCGCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPRVLAQAGSRSRS*AASAEHRRGPRPRG Trigger: ACCCCGCGGACGAGGACCACGCCTATGCTCTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | GAGGCGTGGTGCGGTGGTCCGCGGATGAAGGGCGGGCGGATCTGCTaGATAATTTGCTGCTCCATGAAGATGGGCAGGGGCACTGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EAWCGGPRMKGGRIC*IICCSMKMGRGTGP Trigger: CGGCCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | CCCGGGAGCATGGGGTTGGACAAGGGACTATTGGGGTTGGAGGCGTaGTGCGGTGGTCCGCGGATGAAGGGCGGGCGGATCTGCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: PGSMGLDKGLLGLEA*CGGPRMKGGRICWI Trigger: TATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAACCCCATGCTCCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | CGAGGAGATGACGCACGGCGTCATGGCAGCCTTCTCCGCGGGTTTTaGCACAGGCTGGATCACGCAGCCGGTCTTGGGCAGCATCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGDDARRHGSLLRGF*HRLDHAAGLGQHPQ Trigger: CTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGGCTGCCATGACGCCGTGCGTCATCTCCTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | TGCGGTGGTCCGCGGATGAAGGGCGGGCGGATCTGCTGGATAATTTaGTGCTCCATGAAGATGGGCAGGGGCACTGGGCCGCGGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CGGPRMKGGRICWII*CSMKMGRGTGPRLV Trigger: GACCAACCGCGGCCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | AGAGCAGTTGGCAGTGTCAGATGGAGAAACGGTGGTGGACGAGGATaGGCCGGGGCCCTGGCTTTGGCCAGCTGCAGTCACGGGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAVGSVRWRNGGGRG*AGALALASCSHGGR Trigger: CCTTCCCCCGTGACTGCAGCTGGCCAAAGCCAGGGCCCCGGCCCATCCTCGTCCACCACCGTTTCTCCATCTGACACTGCCAACTGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | GGTGGTCCGCGGATGAAGGGCGGGCGGATCTGCTGGATAATTTGCTaGTCCATGAAGATGGGCAGGGGCACTGGGCCGCGGTTGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GGPRMKGGRICWIIC*SMKMGRGTGPRLVI Trigger: GATGACCAACCGCGGCCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | TTGGAGGCGTGGTGCGGTGGTCCGCGGATGAAGGGCGGGCGGATCTaGTGGATAATTTGCTGCTCCATGAAGATGGGCAGGGGCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEAWCGGPRMKGGRI*WIICCSMKMGRGTG Trigger: CCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | AGGCAGCCCGAAGTTCATCATCTGGGGAACCGGCATCGGGCCGTTTaGCATCATGCTAACCGGAGGGAAGGGAAGGCTGGGCAAGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RQPEVHHLGNRHRAV*HHANRREGKAGQGR Trigger: GCGCCCTTGCCCAGCCTTCCCTTCCCTCCGGTTAGCATGATGCCAAACGGCCCGATGCCGGTTCCCCAGATGATGAACTTCGGGCTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAGCCGGGGCCCTGGCTTaGGCCAGCTGCAGTCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: DGMTWFAPRPLSMQCTLGAGALA*ASCSHG Trigger: CCCGTGACTGCAGCTGGCCAAAGCCAGGGCCCCGGC...TCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | GGGAGCATGGGGTTGGACAAGGGACTATTGGGGTTGGAGGCGTGGTaGGGTGGTCCGCGGATGAAGGGCGGGCGGATCTGCTGGATAATT | + |
|
Preference number: 5 (lower is better) Translates to: GSMGLDKGLLGLEAW*GGPRMKGGRICWII Trigger: AATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAACCCCATGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | CATGGGGTTGGACAAGGGACTATTGGGGTTGGAGGCGTGGTGCGGTaGTCCGCGGATGAAGGGCGGGCGGATCTGCTGGATAATTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HGVGQGTIGVGGVVR*SADEGRADLLDNLL Trigger: CAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAACCCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | CGTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTGCCAGTACCGTTCACGATGACGTaGCAGGCGGCAGCGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTHQTGALYDCLSDSVPVPFTMT*QAAAAS Trigger: CGAGGCCGCTGCCGCCTGCAACGTCATCGTGAACGG...TACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | TCGCTTCCCCGTCCAGGTGGCAGTTGGAAGCGCAGTTGTTCTCCTTaGCCGACTCCAGCTCGTTCACCACAGGCTCCTCGGACGACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLPRPGGSWKRSCSP*PTPARSPQAPRTTV Trigger: TACTGTCGTCCGAGGAGCCTGTGGTGAACGAGCTGGAGTCGGTCAAGGAGAACAACTGCGCTTCCAACTGCCACCTGGACGGGGAAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | ACTCTAGATGAAGTGGGCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCTCGTCCGCGGGGTTATaGAGGTTCGGGTCCGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLDEVGRNGGPGLDGSKTSSAGL*RFGSDL Trigger: CAAGTCGGACCCGAACCTCAATAACCCCGCGGACGA...GGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGCCCACTTCATCTAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 90 bp | GATATTCCAAGAGTCTGGCGTGAGCAGCTGCACCCCGGTGCCTTCTaGTTTACTTTCCATGTGAGGGTGGAGTGTGCTGCACAGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: DIPRVWREQLHPGAF*FTFHVRVECAAQPG Trigger: GCCGGGCTGTGCAGCACACTCCACCCTCACATGGAAAGTAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACGCCAGACTCTTGGAATATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGAATGGTGGGCCCGGGCTTGATGGGTCCAAGACCTGCTGGCTTCTCCGGCTTAGTGACAGAGCAGTaGGCAGTGTCAGATGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGMVGPGLMGPRPAGFSGLVTEQ*AVSDGE Trigger: TTCTCCATCTGACACTGCCAACTGCTCTGTCACTAA...GCCGGAGAAGCCAGCAGGTCTTGGACCCATCAAGCCCGGGCCCACCATTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | CGTACTCATCAGACTGGGGCACTGTACGACTGTCTCAGCGACTCAGTGCCAGTACCCGGGAGCATGGGGTaGGACAAGGGACTATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTHQTGALYDCLSDSVPVPGSMG*DKGLLG Trigger: CCCCAATAGTCCCTTGTCCAACCCCATGCTCCCGGG...TACTGGCACTGAGTCGCTGAGACAGTCGTACAGTGCCCCAGTCTGATGAGTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGAAAGGGACTATTGGGGTaGGAGGCGTGGTGCGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DGMTWFAPRPLSMQCTLGKGLLG*EAWCGG Trigger: ACCACCGCACCACGCCTCCAACCCCAATAGTCCCTT...TCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | CTCATCCATAGAGCCTTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCTGATGGGGAGGGACTaGGGCACTGGCGTGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LIHRALKMGRGYLHWSLWLMGRD*GTGVGI Trigger: AATCCCCACGCCAGTGCCCAAGTCCCTCCCCATCAG...CCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAAGGCTCTATGGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | CTTTCCTCCGAGCATCTGTTAGCGGGATATTCCAAGAGTCTGGCGTaGGCAGCTGCACCCCGGTGCCTTCTGCTTTACTTTCCATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSEHLLAGYSKSLA*AAAPRCLLLYFPCE Trigger: CTCACATGGAAAGTAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACGCCAGACTCTTGGAATATCCCGCTAACAGATGCTCGGAGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGGCACGGTGTATCACGTaGTGCAGCCGGGCTCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GEPLPPRCLMTGSCVICLARCIT*CSRARW Trigger: CCACCGAGCCCGGCTGCACAACGTGATACACCGTGC...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GATGGCATGACATGGTTTGCTCCACGCCCTCTCTCCATGCAATGTACCCTGGGATTCTTCATCTCCTCGTaGATCTCCCTCTTCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DGMTWFAPRPLSMQCTLGFFISS*ISLFTG Trigger: CCCTGTGAAGAGGGAGATCAACGAGGAGATGAAGAA...TCCCAGGGTACATTGCATGGAGAGAGGGCGTGGAGCAAACCATGTCATGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | CGACTGTACAAAGGCGTAGATAGAAATACAGTCTGTACACGCGGACCGCGGCCCGAGAACAGAAATGTGTaGCCGGCTTTCTCCATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLYKGVDRNTVCTRGPRPENRNV*PAFSIR Trigger: ACGGATGGAGAAAGCCGGCAACACATTTCTGTTCTC...GGGCCGCGGTCCGCGTGTACAGACTGTATTTCTATCTACGCCTTTGTACAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | TTGAAGATGGGGCGAGGATACCTACATTGGTCCTTGTGGCGGGTTGGTGTTTTGCAGTTGGAAGCGCAGTaGTTCTCCTTGACCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKMGRGYLHWSLWRVGVLQLEAQ*FSLTDS Trigger: GGAGTCGGTCAAGGAGAACAACTGCGCTTCCAACTG...CAAAACACCAACCCGCCACAAGGACCAATGTAGGTATCCTCGCCCCATCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGCCTTCTCCGCGGGTTTaGGCACAGGCTGGATCACGC | + |
|
Preference number: 5 (lower is better) Translates to: GEPLPPRCLMTGSCVICLPSPRV*AQAGSR Trigger: GCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGG...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | ACATTTACCGAGTTCTCTTGGCATTCGGTCTCCGTAAAACCACAGTATAAACTAGGCACTGGGCCGCGGTaGGTCATCACCATGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFTEFSWHSVSVKPQYKLGTGPR*VITMGG Trigger: CCCTCCCATGGTGATGACCAACCGCGGCCCAGTGCC...TAGTTTATACTGTGGTTTTACGGAGACCGAATGCCAAGAGAACTCGGTAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTCGGTCTCCGTAAAACCACAGTATAAACTATCCATGCTGCTTCCTGCATTGGACAAGGGACTATaGGGGTTGGAGGCGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WHSVSVKPQYKLSMLLPALDKGL*GLEAWC Trigger: GCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAA...TGCAGGAAGCAGCATGGATAGTTTATACTGTGGTTTTACGGAGACCGAATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTGAAACAGAATCCGGGGCCGTCCAGGTGGCAGTaGGAAGCGCAGTTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HISLNHDRRKQTVKQNPGPSRWQ*EAQLFS Trigger: GGAGAACAACTGCGCTTCCAACTGCCACCTGGACGG...CCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAAGCTGAGAAGAATAAACATTTACCGAGTTCTCTTGGCATTCGGTCTCCGGAGGCACCTCCTTTaGAGCGGAGGCTCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRKLRRINIYRVLLAFGLRRHLL*SGGSRS Trigger: GGACCTGGAGCCTCCGCTCAAAAGGAGGTGCCTCCG...GAGACCGAATGCCAAGAGAACTCGGTAAATGTTTATTCTTCTCAGCTTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | TCTGCAAAGTTCTTCATCTCCTCGTTGATCTCCCTCTTCACAGGGTaGGCGGGTTTCCGGCTTCTTTTATTTTCCGGAGGTCTCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAKFFISSLISLFTG*AGFRLLLFSGGLPS Trigger: AGAAGGGAGACCTCCGGAAAATAAAAGAAGCCGGAAACCCGCTCACCCTGTGAAGAGGGAGATCAACGAGGAGATGAAGAACTTTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | TCTCACTTTCTCTCTTGTTTGCATCGGCTTGTCCATACCATTCTAATTATCATGTTGGAAGAGCCCTGCTaGGAGTCCCGCGGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHFLSCLHRLVHTILIIMLEEPC*ESRGDR Trigger: CCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAA...CATGATAATTAGAATGGTATGGACAAGCCGATGCAAACAAGAGAGAAAGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAAGCTGAGAAGAATAAACATTTACCGAGTTCTCTTGGCATTCGGTCTCGGCGAGTCGGCTGACTaGGAAGAGCCCTGCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KRKLRRINIYRVLLAFGLGESAD*EEPCLE Trigger: CTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCC...GAGACCGAATGCCAAGAGAACTCGGTAAATGTTTATTCTTCTCAGCTTTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | ATGAAAGGTGGTGGGATTAAAGGGACAATAATAGGCACATTGCCATaGTCCTTTGACCCAGCAGGTGAGTCACTGAGTCCATTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MKGGGIKGTIIGTLP*SFDPAGESLSPFPV Trigger: CACTGGGAATGGACTCAGTGACTCACCTGCTGGGTCAAAGGACCATGGCAATGTGCCTATTATTGTCCCTTTAATCCCACCACCTTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 90 bp | TGCAGAAGCTTTTCACCTCGCTTCCCATACTCAGGGAATAGCGCTTaGTCCCCACTTTCTGGCACCAGGCACACATTATTTGTACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CRSFSPRFPYSGNSA*SPLSGTRHTLFVHL Trigger: CAAATGTACAAATAATGTGTGCCTGGTGCCAGAAAGTGGGGATCAAGCGCTATTCCCTGAGTATGGGAAGCGAGGTGAAAAGCTTCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 90 bp | TGCTTTACTTTCCATGTGAGGGTGGAGTGTGCTGCACAGCCCGGCTaGAAGATTGGCCTGTGTCTCTTTGTAGAAAATGTCCATTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CFTFHVRVECAAQPG*KIGLCLFVENVHFV Trigger: TACAAAATGGACATTTTCTACAAAGAGACACAGGCCAATCTTCCAGCCGGGCTGTGCAGCACACTCCACCCTCACATGGAAAGTAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | TTTGGTCTTCAGTTCAACACTCTTGCTCTGTTCCCAAATGGGGCGCTGTTTAGGGATCTGCTGGATAATTaGCTGCTCCATGAAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: FGLQFNTLALFPNGALFRDLLDN*LLHEDG Trigger: CCCATCTTCATGGAGCAGCAAATTATCCAGCAGATC...CCTAAACAGCGCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAAGACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GCGCAGAGAGAGATTGTCTCGCTGACTTCCTGGACCACAGAAAACCATCAGGGTTGTCCTCCGGTAATTTaGGTTTTGGCAAAGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: AQREIVSLTSWTTENHQGCPPVI*VLAKNF Trigger: AAAATTCTTTGCCAAAACCAAAATTACCGGAGGACA...ACCCTGATGGTTTTCTGTGGTCCAGGAAGTCAGCGAGACAATCTCTCTCTGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCTTAACCATGACAGGAGAAAGCAAACAGTGAAACAGAATCCGGGGAGTTCGCAGTTATTCTaGAAGGCAAGCCTTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HISLNHDRRKQTVKQNPGSSQLF*KASLGV Trigger: AACTCCAAGGCTTGCCTTCAAGAATAACTGCGAACT...CCCCGGATTCTGTTTCACTGTTTGCTTTCTCCTGTCATGGTTAAGAGAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGCCACTTCCTCCAAGATGTTTAATGACCGGAAGCTGTGTTATTTGCTTGAATCCAGGTATTCTTTaGTGTGCCTTATGTGTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: GEPLPPRCLMTGSCVICLNPGIL*CALCVY Trigger: GTAAACACATAAGGCACACAAAAGAATACCTGGATT...CAAGCAAATAACACAGCTTCCGGTCATTAAACATCTTGGAGGAAGTGGCTCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 72 bp | CCCACGGTCAGGTCGATGACGCCGTCCTGCGGGCCGTaGAACACGCCCGCGAAGCCCGGCTGGCCTCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTVRSMTPSCGP*NTPAKPGWPPA Trigger: TGCGGGAGGCCAGCCGGGCTTCGCGGGCGTGTTGCACGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | CCACGACCGCGCTCCGCGGGCGCCAGGCTCAGAGCCTaGCCGGAGCTTCCGGGTGGCGAGTCGGCTGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PRPRSAGARLRA*PELPGGESADL Trigger: CAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGGCTCTGAGCCTGGCGCCCGCGGAGCGCGGTCGTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | TGTGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATaGCGCCGTCCTGCGGGCCGTGCAACACGCCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: CAAGLGGPRSGR*RRPAGRATRPR Trigger: TCGCGGGCGTGTTGCACGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | CGCTCCGCGGCTCCCGGCTCGCGCTCCGCCTTGACGTaGGCGTGCAGCGCACGGTGTATCACGTTGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSAAPGSRSALT*ACSARCITLCS Trigger: GCTGCACAACGTGATACACCGTGCGCTGCACGCTCACGTCAAGGCGGAGCGCGAGCCGGGAGCCGCGGAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | TGGGCAGGGGCACTGGGCCGCGGTTGGTCATCACCATaGGAGGGCTGCGAGGCGGGACACCCAGTGGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WAGALGRGWSSP*EGCEAGHPVEV Trigger: GACCTCCACTGGGTGTCCCGCCTCGCAGCCCTCCCATGGTGATGACCAACCGCGGCCCAGTGCCCCTGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | CCTGGCCGGAGCTTCCGGGTGGCGAGTCGGCTGACTTaGAAGAGCCCTGCTTGGAGTCCCGCGGGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGRSFRVASRLT*KSPAWSPAGTG Trigger: CCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | CCGGGTGGCGAGTCGGCTGACTTGGAAGAGCCCTGCTaGGAGTCCCGCGGGGACAGGGAGCGTCCACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGGESADLEEPC*ESRGDRERPPA Trigger: GGCTGGTGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | GCCTGGCCGGAGCTTCCGGGTGGCGAGTCGGCTGACTaGGAAGAGCCCTGCTTGGAGTCCCGCGGGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AWPELPGGESAD*EEPCLESRGDR Trigger: CCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 90 bp | CCGGAGCTTCCGGGTGGCGAGTCGGCTGACTTGGAAGAGCCCTGCTaGGAGTCCCGCGGGGACAGGGAGCGTCCACCAGCCTTGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PELPGGESADLEEPC*ESRGDRERPPALPP Trigger: GGGAGGCAAGGCTGGTGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 90 bp | AGGCTCAGAGCCTGGCCGGAGCTTCCGGGTGGCGAGTCGGCTGACTaGGAAGAGCCCTGCTTGGAGTCCCGCGGGGACAGGGAGCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLRAWPELPGGESAD*EEPCLESRGDRERP Trigger: TGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGGCTCTGAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | CAGAGCCTGGCCGGAGCTTCCGGGTGGCGAGTCGGCTaGCTTGGAAGAGCCCTGCTTGGAGTCCCGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QSLAGASGWRVG*LGRALLGVPRG Trigger: TCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAGCTCCGGCCAGGCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | TCCTGCGCTCCGCGGCTCCCGGCTCGCGCTCCGCCTTaGCGTGAGCGTGCAGCGCACGGTGTATCACGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCAPRLPARAPP*RERAAHGVSRC Trigger: ACAACGTGATACACCGTGCGCTGCACGCTCACGTCAAGGCGGAGCGCGAGCCGGGAGCCGCGGAGCGCAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | CGGGTGGCGAGTCGGCTGACTTGGAAGAGCCCTGCTTaGAGTCCCGCGGGGACAGGGAGCGTCCACCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RVASRLTWKSPA*SPAGTGSVHQP Trigger: AGGCTGGTGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | AGCGCACGGTGTATCACGTTGTGCAGCCGGGCTCGGTaGCCCACGGTCAGGTCGATGACGCCGTCCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SARCITLCSRAR*PTVRSMTPSCG Trigger: CCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATACACCGTGCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 72 bp | CTTCCGGGTGGCGAGTCGGCTGACTTGGAAGAGCCCTaGTTGGAGTCCCGCGGGGACAGGGAGCGTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGGESADLEEP*LESRGDRERPP Trigger: TGGTGGACGCTCCCTGTCCCCGCGGGACTCCAAGCAGGGCTCTTCCAAGTCAGCCGACTCGCCACCCGGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 72 bp | GGGTTGGACAAGGGACTATTGGGGTTGGAGGCGTGGTaGGGTGGTCCGCGGATGAAGGGCGGGCGGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLDKGLLGLEAW*GGPRMKGGRIC Trigger: GCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | AGGCGGGACACCCAGTGGAGGTCCGATGCTAGCAGGTaGCTGGACCGAGACGGGAGGGATGCTCGGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRDTQWRSDASR*LDRDGRDARSL Trigger: GAGACTCCGAGCATCCCTCCCGTCTCGGTCCAGCCACCTGCTAGCATCGGACCTCCACTGGGTGTCCCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | CATCACCATGGGAGGGCTGCGAGGCGGGACACCCAGTaGAGGTCCGATGCTAGCAGGTGGCTGGACCGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HHHGRAARRDTQ*RSDASRWLDRD Trigger: GTCTCGGTCCAGCCACCTGCTAGCATCGGACCTCCACTGGGTGTCCCGCCTCGCAGCCCTCCCATGGTGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | GACGCACGGCGTCATGGCAGCCTTCTCCGCGGGTTTTaGCACAGGCTGGATCACGCAGCCGGTCTTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DARRHGSLLRGF*HRLDHAAGLGQ Trigger: CTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGGCTGCCATGACGCCGTGCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | TGCTCCATGAAGATGGGCAGGGGCACTGGGCCGCGGTaGGTCATCACCATGGGAGGGCTGCGAGGCGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: CSMKMGRGTGPR*VITMGGLRGGT Trigger: TGTCCCGCCTCGCAGCCCTCCCATGGTGATGACCAACCGCGGCCCAGTGCCCCTGCCCATCTTCATGGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | CCCGGGAGCATGGGGTTGGACAAGGGACTATTGGGGTaGGAGGCGTGGTGCGGTGGTCCGCGGATGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGSMGLDKGLLG*EAWCGGPRMKG Trigger: GCCCTTCATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAACCCCATGCTCCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | GGCAGTGTCAGATGGAGAAACGGTGGTGGACGAGGATaGGCCGGGGCCCTGGCTTTGGCCAGCTGCAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSVRWRNGGGRG*AGALALASCSH Trigger: GTGACTGCAGCTGGCCAAAGCCAGGGCCCCGGCCCATCCTCGTCCACCACCGTTTCTCCATCTGACACTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | GGACAAGGGACTATTGGGGTTGGAGGCGTGGTGCGGTaGTCCGCGGATGAAGGGCGGGCGGATCTGCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GQGTIGVGGVVR*SADEGRADLLD Trigger: ATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | ATGGGGTTGGACAAGGGACTATTGGGGTTGGAGGCGTaGTGCGGTGGTCCGCGGATGAAGGGCGGGCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: MGLDKGLLGLEA*CGGPRMKGGRI Trigger: GATCCGCCCGCCCTTCATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAACCCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | CCAATGCCCGGGAGCATGGGGTTGGACAAGGGACTATaGGGGTTGGAGGCGTGGTGCGGTGGTCCGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: PMPGSMGLDKGL*GLEAWCGGPRM Trigger: CATCCGCGGACCACCGCACCACGCCTCCAACCCCAATAGTCCCTTGTCCAACCCCATGCTCCCGGGCATTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 90 bp | GTGCGGTGGTCCGCGGATGAAGGGCGGGCGGATCTGCTGGATAATTaGCTGCTCCATGAAGATGGGCAGGGGCACTGGGCCGCGGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VRWSADEGRADLLDN*LLHEDGQGHWAAVG Trigger: ACCAACCGCGGCCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 72 bp | CCGCGGATGAAGGGCGGGCGGATCTGCTGGATAATTTaGTGCTCCATGAAGATGGGCAGGGGCACTGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRMKGGRICWII*CSMKMGRGTGP Trigger: CGGCCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | CAGAGCAGTTGGCAGTGTCAGATGGAGAAACGGTGGTaGACGAGGATGGGCCGGGGCCCTGGCTTTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSSWQCQMEKRW*TRMGRGPGFGQ Trigger: CTGGCCAAAGCCAGGGCCCCGGCCCATCCTCGTCCACCACCGTTTCTCCATCTGACACTGCCAACTGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | CGGGTTTTGGCACAGGCTGGATCACGCAGCCGGTCTTaGGCAGCATCCGCAGAGCATAGGCGTGGTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RVLAQAGSRSRS*AASAEHRRGPR Trigger: ACGAGGACCACGCCTATGCTCTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | GTCATGGCAGCCTTCTCCGCGGGTTTTGGCACAGGCTaGATCACGCAGCCGGTCTTGGGCAGCATCCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VMAAFSAGFGTG*ITQPVLGSIRR Trigger: TCTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGGCTGCCATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 90 bp | ATAATTTGCTGCTCCATGAAGATGGGCAGGGGCACTGGGCCGCGGTaGGTCATCACCATGGGAGGGCTGCGAGGCGGGACACCCAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: IICCSMKMGRGTGPR*VITMGGLRGGTPSG Trigger: TCCACTGGGTGTCCCGCCTCGCAGCCCTCCCATGGTGATGACCAACCGCGGCCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | TGCGGTGGTCCGCGGATGAAGGGCGGGCGGATCTGCTaGATAATTTGCTGCTCCATGAAGATGGGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CGGPRMKGGRIC*IICCSMKMGRG Trigger: GCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | AGCGGGGCCAGCGAAGGCAGCCCGAAGTTCATCATCTaGGGAACCGGCATCGGGCCGTTTGGCATCATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGASEGSPKFII*GTGIGPFGIML Trigger: TAGCATGATGCCAAACGGCCCGATGCCGGTTCCCCAGATGATGAACTTCGGGCTGCCTTCGCTGGCCCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | TCCGCGGATGAAGGGCGGGCGGATCTGCTGGATAATTaGCTGCTCCATGAAGATGGGCAGGGGCACTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SADEGRADLLDN*LLHEDGQGHWA Trigger: GGCCCAGTGCCCCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 90 bp | GTCGCTTCCCCGTCCAGGTGGCAGTTGGAAGCGCAGTTGTTCTCCTaGACCGACTCCAGCTCGTTCACCACAGGCTCCTCGGACGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: VASPSRWQLEAQLFS*TDSSSFTTGSSDDS Trigger: ACTGTCGTCCGAGGAGCCTGTGGTGAACGAGCTGGAGTCGGTCAAGGAGAACAACTGCGCTTCCAACTGCCACCTGGACGGGGAAGCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | CGTCCAGGTGGCAGTTGGAAGCGCAGTTGTTCTCCTTaGCCGACTCCAGCTCGTTCACCACAGGCTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RPGGSWKRSCSP*PTPARSPQAPR Trigger: CCGAGGAGCCTGTGGTGAACGAGCTGGAGTCGGTCAAGGAGAACAACTGCGCTTCCAACTGCCACCTGGACG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 72 bp | TGGTGCGGTGGTCCGCGGATGAAGGGCGGGCGGATCTaGTGGATAATTTGCTGCTCCATGAAGATGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WCGGPRMKGGRI*WIICCSMKMGR Trigger: CCTGCCCATCTTCATGGAGCAGCAAATTATCCAGCAGATCCGCCCGCCCTTCATCCGCGGACCACCGCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | CCGTCCAGGTGGCAGTTGGAAGCGCAGTTGTTCTCCTaGACCGACTCCAGCTCGTTCACCACAGGCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PSRWQLEAQLFS*TDSSSFTTGSS Trigger: CGAGGAGCCTGTGGTGAACGAGCTGGAGTCGGTCAAGGAGAACAACTGCGCTTCCAACTGCCACCTGGACGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 90 bp | GGGAGGGACTTGGGCACTGGCGTGGGGATTTTAGTGACAGAGCAGTaGGCAGTGTCAGATGGAGAAACGGTGGTGGACGAGGATGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GRDLGTGVGILVTEQ*AVSDGETVVDEDGP Trigger: CGGCCCATCCTCGTCCACCACCGTTTCTCCATCTGACACTGCCAACTGCTCTGTCACTAAAATCCCCACGCCAGTGCCCAAGTCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | GAAGTTCATCATCTGGGGAACCGGCATCGGGCCGTTTaGCATCATGCTAACCGGAGGGAAGGGAAGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVHHLGNRHRAV*HHANRREGKAG Trigger: CCCAGCCTTCCCTTCCCTCCGGTTAGCATGATGCCAAACGGCCCGATGCCGGTTCCCCAGATGATGAACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | GTCGCTTCCCCGTCCAGGTGGCAGTTGGAAGCGCAGTaGTTCTCCTTGACCGACTCCAGCTCGTTCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: VASPSRWQLEAQ*FSLTDSSSFTT Trigger: TGTGGTGAACGAGCTGGAGTCGGTCAAGGAGAACAACTGCGCTTCCAACTGCCACCTGGACGGGGAAGCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 72 bp | AGAGTCTGGCGTGAGCAGCTGCACCCCGGTGCCTTCTaGTTTACTTTCCATGTGAGGGTGGAGTGTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVWREQLHPGAF*FTFHVRVECAA Trigger: TGCAGCACACTCCACCCTCACATGGAAAGTAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACGCCAGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS GCA 72 bp | AGTAGGCTCTCCGGCAGGCCGCAAAGCATTTCTCGCTaGAGAAGCTTTTCACCTCGCTTCCCATACTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRLSGRPQSISR*RSFSPRFPYSG Trigger: CCCTGAGTATGGGAAGCGAGGTGAAAAGCTTCTGCAGCGAGAAATGCTTTGCGGCCTGCCGGAGAGCCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | TTGGGCACTGGCGTGGGGATTTTAGTGACAGAGCAGTaGGCAGTGTCAGATGGAGAAACGGTGGTGGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGTGVGILVTEQ*AVSDGETVVDE Trigger: CTCGTCCACCACCGTTTCTCCATCTGACACTGCCAACTGCTCTGTCACTAAAATCCCCACGCCAGTGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CAA 72 bp | TACTTATTCTGGTTTCTAATTCGGAGGCACCTCCTTTaGAGCGGAGGCTCCAGGTCCTCAGGGCCAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YLFWFLIRRHLL*SGGSRSSGPAL Trigger: CAGCGCTGGCCCTGAGGACCTGGAGCCTCCGCTCAAAAGGAGGTGCCTCCGAATTAGAAACCAGAATAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | GAGCATCTGTTAGCGGGATATTCCAAGAGTCTGGCGTaGGCAGCTGCACCCCGGTGCCTTCTGCTTTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: EHLLAGYSKSLA*AAAPRCLLLYF Trigger: AAAGTAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACGCCAGACTCTTGGAATATCCCGCTAACAGATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | TTCCATGTGAGGGTGGAGTGTGCTGCACAGCCCGGCTaGAAGATTGGCCTGTGTCTCTTTGTAGAAAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: FHVRVECAAQPG*KIGLCLFVENV Trigger: GACATTTTCTACAAAGAGACACAGGCCAATCTTCCAGCCGGGCTGTGCAGCACACTCCACCCTCACATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | TCATGGTGTTTTCTGCAAAGTTCTTCATCTCCTCGTTaGTCTCCCTCTTCACAGGGTGAGCGGGTTTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SWCFLQSSSSPR*SPSSQGERVSG Trigger: GCCGGAAACCCGCTCACCCTGTGAAGAGGGAGATCAACGAGGAGATGAAGAACTTTGCAGAAAACACCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | TTCTTCATCTCCTCGTTGATCTCCCTCTTCACAGGGTaGGCGGGTTTCCGGCTTCTTTTATTTTCCGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FFISSLISLFTG*AGFRLLLFSGG Trigger: ACCTCCGGAAAATAAAAGAAGCCGGAAACCCGCTCACCCTGTGAAGAGGGAGATCAACGAGGAGATGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS CCA 72 bp | GGTGGGATTAAAGGGACAATAATAGGCACATTGCCATaGTCCTTTGACCCAGCAGGTGAGTCACTGAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGIKGTIIGTLP*SFDPAGESLSP Trigger: TGGACTCAGTGACTCACCTGCTGGGTCAAAGGACCATGGCAATGTGCCTATTATTGTCCCTTTAATCCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||
| CDS TCA 72 bp | TTTTCACCTCGCTTCCCATACTCAGGGAATAGCGCTTaGTCCCCACTTTCTGGCACCAGGCACACATTATTT | + |
|
Preference number: 6 (lower is better) Translates to: FSPRFPYSGNSA*SPLSGTRHTLF Trigger: AAATAATGTGTGCCTGGTGCCAGAAAGTGGGGATCAAGCGCTATTCCCTGAGTATGGGAAGCGAGGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040275.9 |
||