Pregenerated sensors for SOAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023045Ensembl transcript IDs: ENSMUST00000023806.14, ENSMUST00000160465.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACTCCAAATaGGGTAGTGAGGAACCCTGGCTCTGGGCTTTGCAGGCAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PWPPGRSYVQVPDSK*GSEEPWLWALQAEK Trigger: CTTCTCTGCCTGCAAAGCCCAGAGCCAGGGTTCCTCACTACCTCATTTGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| 3UTR TCA 90 bp | TTGGTGTGCCCTGTTCCTCTGAGTCTCCGCACACTTGGAGAGACATaGAGGGAACCTGTGCCCAGTCCACAGAGGGTAGGTGCTCGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LVCPVPLSLRTLGET*REPVPSPQRVGARV Trigger: GACTCGAGCACCTACCCTCTGTGGACTGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGAGGAACAGGGCACACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR GCA 90 bp | AGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTaGAAGTCCCTGACTCCAAATGAGGTAGTGAGGAACCCTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: RGGYLSPHGPLEGPM*KSLTPNEVVRNPGS Trigger: AGAGCCAGGGTTCCTCACTACCTCATTTGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| 3UTR CCA 90 bp | AATGTTGTCTGGGGCAGGGGACAGTGTCGACGAGCATACCACTCCTaGCAGTATAGGCTGACCTGGATGCCCTGGCCCATGAAGAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: NVVWGRGQCRRAYHS*QYRLTWMPWPMKRK Trigger: CTTTCTCTTCATGGGCCAGGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCCCCTGCCCCAGACAACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR TCA 90 bp | GCAGAAAGAACCAAACGTGTCAGACTTTGGTGTGCCCTGTTCCTCTaGGTCTCCGCACACTTGGAGAGACATGAAGGGAACCTGTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: AERTKRVRLWCALFL*VSAHLERHEGNLCP Trigger: TGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGAGGAACAGGGCACACCAAAGTCTGACACGTTTGGTTCTTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR CCA 90 bp | CTGAGCCATCTCTCCAGTCCGAGACTAAGATTTTTATTGTTGCATTaGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTGGTGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: LSHLSSPRLRFLLLH*EKQKEPNVSDFGVP Trigger: GGGCACACCAAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCTTAGTCTCGGACTGGAGAGATGGCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR-3UTR TCA 90 bp | CATGAACCACCGCAGACACCAGGAACACTCCCAGCATGGCCACCCCGCGAGCCCGAGCCTGTGGTCAGCTaGCCACAGAGGTGGGTACCT | + |
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Preference number: 2 (lower is better) Translates to: HEPPQTPGTLPAWPPREPEPVVS*PQRWVP Trigger: AGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTC...GGGCTCGCGGGGTGGCCATGCTGGGAGTGTTCCTGGTGTCTGCGGTGGTTCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAGTGTCGACGAGCATACCACTCCTGGCAGTATAGGCTGACCTGGATGCCCCCTGGCCCCGTGGCATaGAAGATGGAGAGCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GQCRRAYHSWQYRLTWMPPGPVA*KMESSR Trigger: TCTGCTGCTCTCCATCTTGCATGCCACGGGGCCAGG...GGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCATGAACCACCGCAGACACCAGGAACACTCCCAGCATGGCCACCCCGCGAGCCACGACGTTCCAGGTaGGGTAGTAGTTGGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: THEPPQTPGTLPAWPPREPRRSR*GSSWRR Trigger: CCTTCTCCAACTACTACCGCACCTGGAACGTCGTGG...CTCGCGGGGTGGCCATGCTGGGAGTGTTCCTGGTGTCTGCGGTGGTTCATGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGAAAGGTCCACATCAGGATGTTCCAGGCTGGACCTGTGTGCCTGTCGTTACAGAGGTGGGTACCTaGGTCCCCATGGCCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EEKGPHQDVPGWTCVPVVTEVGT*VPMAPW Trigger: CCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGT...AACGACAGGCACACAGGTCCAGCCTGGAACATCCTGATGTGGACCTTTCTCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCAGGGGACAGTGTCGACGAGCATACCACTCCTGGCAGTATAGGCTGACCCAGCATGAAGATGCCTaGCCCCGTGGCATGCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: WGRGQCRRAYHSWQYRLTQHEDA*PRGMQD Trigger: ATCTTGCATGCCACGGGGCCAGGCATCTTCATGCTG...GGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCCCCTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCAGGGGACAGTGTCGACGAGCATACCACTCCTGGCAGTATAGGCTGACCACCATACTGAGCCTGTaGTCAGCTGACCACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: WGRGQCRRAYHSWQYRLTTILSL*SADHRG Trigger: ACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGT...GGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCCCCTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCATGAACCACCGCAGACACCAGGAACACTCCCAGCATGGCCACCCCGCGAGAGGTGCGGTAGTAGTTaGAGAAGGAAGTCGAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: THEPPQTPGTLPAWPPRERCGSS*RRKSSS Trigger: GGAACTCGACTTCCTTCTCCAACTACTACCGCACCT...CTCGCGGGGTGGCCATGCTGGGAGTGTTCCTGGTGTCTGCGGTGGTTCATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTGTCGACGAGCATACCACTCCTGGCAGTATAGGCTGACCTGGATGCCCCTGTACAGCCAGTCATaGACCACGACGTTCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GQCRRAYHSWQYRLTWMPLYSQS*TTTFQV Trigger: CACCTGGAACGTCGTGGTCCATGACTGGCTGTACAG...GGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGTCTCCGCACACTTGGAGAGACATGAAGGGAACCTGTGCCCAGTCCACAGGTAGTGAGGAACCCTaGCTCTGGGCTTTGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SESPHTWRDMKGTCAQSTGSEEP*LWALQA Trigger: TGCCTGCAAAGCCCAGAGCCAGGGTTCCTCACTACC...TGTGGACTGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR-3UTR CCA 90 bp | CACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACCTGAGTCCCACCATACTGAGCCTGTaGTCAGCTGACCACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: HTILSLWSADHRGGYLSPTILSL*SADHRG Trigger: ACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGT...GGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCCTAAGAGCCACAGCCCATCTTGATACACATAGCTGTACAGCCAGTCATCCGTGGCATGCAAGATaGAGAGCAGCAGAGCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: ACLRATAHLDTHSCTASHPWHAR*RAAEPG Trigger: CCCGGGCTCTGCTGCTCTCCATCTTGCATGCCACGG...ATGACTGGCTGTACAGCTATGTGTATCAAGATGGGCTGTGGCTCTTAGGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR GCA 90 bp | CGACGAGCATACCACTCCTGGCAGTATAGGCTGACCTGGATGCCCTGGCCCATGCTGGAAGGTCCTATGTaGAAGTCCCTGACTCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: RRAYHSWQYRLTWMPWPMLEGPM*KSLTPN Trigger: ATTTGGAGTCAGGGACTTGCACATAGGACCTTCCAG...CATGGGCCAGGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCCTAAGAGCCACAGCCCATCTTGATACACATAGCTGTACAGCCAGTCATGGTAGTGAGGAACCCTaGCTCTGGGCTTTGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ACLRATAHLDTHSCTASHGSEEP*LWALQA Trigger: TGCCTGCAAAGCCCAGAGCCAGGGTTCCTCACTACC...ATGACTGGCTGTACAGCTATGTGTATCAAGATGGGCTGTGGCTCTTAGGCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGTCCGAGACTAAGATTTTTATTACAGAGGTGGGTACCTaGGTCCCCATGGCCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SVLLTTEPSLQSETKIFITEVGT*VPMAPW Trigger: CCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGT...AATAAAAATCTTAGTCTCGGACTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR CAA 90 bp | GATCCCATTTCAGATGGCTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCACTCAGTGCTCTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: DPISDGCEPPCGCWE*NSGPLEEHSVLLTT Trigger: AGTGGTTAAGAGCACTGAGTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAGCCATCTGAAATGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCTTTTTATTGTTGCATTaGGAGAAGCAGAAAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: RGGYLSPHGPLEGPMCKSFLLLH*EKQKEP Trigger: TGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAA...GGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR CAA 90 bp | ACTGAGCCATCTCTCCAGTCCGAGACTAAGATTTTTATTGTTGCATaGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTGGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TEPSLQSETKIFIVA*GEAERTKRVRLWCA Trigger: GGCACACCAAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCTTAGTCTCGGACTGGAGAGATGGCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR CCA 72 bp | CATGAACCACCGCAGACACCAGGAACACTCCCAGCATaGCCACCCCGCGAGCCCGCCTGCCTAAGAGCCACA | + |
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Preference number: 3 (lower is better) Translates to: HEPPQTPGTLPA*PPREPACLRAT Trigger: TGTGGCTCTTAGGCAGGCGGGCTCGCGGGGTGGCCATGCTGGGAGTGTTCCTGGTGTCTGCGGTGGTTCATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR GCA 72 bp | GGAACACTCCCAGCATGGCCACCCCGCGAGCCCGCCTaGCTAAGAGCCACAGCCCATCTTGATACACATAGC | + |
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Preference number: 3 (lower is better) Translates to: GTLPAWPPREPA*LRATAHLDTHS Trigger: GCTATGTGTATCAAGATGGGCTGTGGCTCTTAGGCAGGCGGGCTCGCGGGGTGGCCATGCTGGGAGTGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR CCA 72 bp | TGGGGCAGGGGACAGTGTCGACGAGCATACCACTCCTaGCAGTATAGGCTGACCTGGATGCCCTGGCCCATG | + |
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Preference number: 3 (lower is better) Translates to: WGRGQCRRAYHS*QYRLTWMPWPM Trigger: CATGGGCCAGGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCCCCTGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR TCA 72 bp | GTGCTCGAGTCACACCATACTGAGCCTGTGGTCAGCTaGCCACAGAGGTGGGTACCTGAGTCCCCATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: VLESHHTEPVVS*PQRWVPESPWP Trigger: GGGCCATGGGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTGACTCGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR CCA 72 bp | GAGGGTAGGTGCTCGAGTCACACCATACTGAGCCTGTaGTCAGCTGACCACAGAGGTGGGTACCTGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: EGRCSSHTILSL*SADHRGGYLSP Trigger: GGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTGACTCGAGCACCTACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR TCA 72 bp | AGTCCACAGAGGGTAGGTGCTCGAGTCACACCATACTaGGCCTGTGGTCAGCTGACCACAGAGGTGGGTACC | + |
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Preference number: 3 (lower is better) Translates to: SPQRVGARVTPY*ACGQLTTEVGT Trigger: GGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTGACTCGAGCACCTACCCTCTGTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR TCA 72 bp | CCTGTTCCTCTGAGTCTCCGCACACTTGGAGAGACATaGAGGGAACCTGTGCCCAGTCCACAGAGGGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: PVPLSLRTLGET*REPVPSPQRVG Trigger: ACCTACCCTCTGTGGACTGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGAGGAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR GCA 72 bp | ATGAAGGGAACCTGTGCCCAGTCCACAGAGGGTAGGTaGTCGAGTCACACCATACTGAGCCTGTGGTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: MKGTCAQSTEGR*SSHTILSLWSA Trigger: AGCTGACCACAGGCTCAGTATGGTGTGACTCGAGCACCTACCCTCTGTGGACTGGGCACAGGTTCCCTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR CCA 72 bp | CGACGAGCATACCACTCCTGGCAGTATAGGCTGACCTaGATGCCCTGGCCCATGAAGAGAAAGGTCCACATC | + |
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Preference number: 3 (lower is better) Translates to: RRAYHSWQYRLT*MPWPMKRKVHI Trigger: GATGTGGACCTTTCTCTTCATGGGCCAGGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTGCCTAAGAGCCACAGCCCATCTTGATACACATAGCTGTACAGCCAGTCATATCTCGGCGAAGGCGTaGAGCCAGCAGTGCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ACLRATAHLDTHSCTASHISAKA*SQQCRK Trigger: CTTCCTGCACTGCTGGCTCAACGCCTTCGCCGAGAT...ATGACTGGCTGTACAGCTATGTGTATCAAGATGGGCTGTGGCTCTTAGGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| 3UTR TCA 72 bp | CCTGGAAGGTCCTATGTGCAAGTCCCTGACTCCAAATaGGGTAGTGAGGAACCCTGGCTCTGGGCTTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PGRSYVQVPDSK*GSEEPWLWALQ Trigger: CTGCAAAGCCCAGAGCCAGGGTTCCTCACTACCTCATTTGGAGTCAGGGACTTGCACATAGGACCTTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| 3UTR GCA 72 bp | TACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTaGAAGTCCCTGACTCCAAATGAGGTAGTGAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: YLSPHGPLEGPM*KSLTPNEVVRN Trigger: GTTCCTCACTACCTCATTTGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| 3UTR CCA 72 bp | TTTGGTGTGCCCTGTTCCTCTGAGTCTCCGCACACTTaGAGAGACATGAAGGGAACCTGTGCCCAGTCCACA | + |
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Preference number: 3 (lower is better) Translates to: FGVPCSSESPHT*RDMKGTCAQST Trigger: TGTGGACTGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGAGGAACAGGGCACACCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| 3UTR GCA 72 bp | AGAAGCAGAAAGAACCAAACGTGTCAGACTTTGGTGTaGCCTGTTCCTCTGAGTCTCCGCACACTTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: RSRKNQTCQTLV*PVPLSLRTLGE Trigger: CTCTCCAAGTGTGCGGAGACTCAGAGGAACAGGGCACACCAAAGTCTGACACGTTTGGTTCTTTCTGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR CCA 90 bp | TACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACTCCACCCCAGCGCGCGGCCTaGCCCACAGCCACAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YLSPHGPLEGPMCKSLTPPQRAA*PTATGS Trigger: AGACCCTGTGGCTGTGGGCCAGGCCGCGCGCTGGGG...TGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | CACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACCTGAGTCCCGAACGCAGCCCAGGCTaGCCCCCAGCATCCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: HTILSLWSADHRGGYLSPERSPG*PPASRH Trigger: GTGCCTGGATGCTGGGGGCCAGCCTGGGCTGCGTTC...GGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | GGACAGTGTCGACGAGCATACCACTCCTGGCAGTATAGGCTGACCTGGATGCCCGAACGCAGCCCAGGCTaGCCCCCAGCATCCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GQCRRAYHSWQYRLTWMPERSPG*PPASRH Trigger: GTGCCTGGATGCTGGGGGCCAGCCTGGGCTGCGTTC...GGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| CDS-3UTR TCA 90 bp | AGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCCTGGCAGTATAGGCTaGCCTGGATGCCCTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGGYLSPHGPLEGPMCKSPGSIG*PGCPGP Trigger: TGGGCCAGGGCATCCAGGTCAGCCTATACTGCCAGG...GGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR TCA 90 bp | TGGGGCAGGGGACAGTGTCGACGAGCATACCACTCCTGGCAGTATAGGCTGACCAAGCTCATGCCTCACTaGCACGTGCACCGGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: WGRGQCRRAYHSWQYRLTKLMPH*HVHRQD Trigger: GTCCTGCCGGTGCACGTGTCAGTGAGGCATGAGCTT...GGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCCCCTGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| CDS-3UTR GCA 90 bp | CCAGGAACACTCCCAGCATGGCCACCCCGCGAGCCCGCCTGCCTAAGAGCCACAATCAGCAATCTGACCTaGTCAAAGACCAGCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGTLPAWPPREPACLRATISNLT*SKTSTQ Trigger: CTGCGTGCTGGTCTTTGAGCAGGTCAGATTGCTGAT...TGTGGCTCTTAGGCAGGCGGGCTCGCGGGGTGGCCATGCTGGGAGTGTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | TACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACTCCACAGAGCACCACAGCGTaGGCAGCCAGCAGAACGCAG | + |
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Preference number: 4 (lower is better) Translates to: YLSPHGPLEGPMCKSLTPQSTTA*AASRTQ Trigger: CTGCGTTCTGCTGGCTGCCCACGCTGTGGTGCTCTG...TGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | CACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACCTGAGTCCCCAGAGCACCACAGCGTaGGCAGCCAGCAGAACGCAG | + |
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Preference number: 4 (lower is better) Translates to: HTILSLWSADHRGGYLSPQSTTA*AASRTQ Trigger: CTGCGTTCTGCTGGCTGCCCACGCTGTGGTGCTCTG...GGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | TACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACTCCACCGTGGCATGCAAGATaGAGAGCAGCAGAGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: YLSPHGPLEGPMCKSLTPPWHAR*RAAEPG Trigger: CCCGGGCTCTGCTGCTCTCCATCTTGCATGCCACGG...TGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR TCA 90 bp | AGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCACCTGCCCTCATCAATaGAGTCGATGGCCAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGGYLSPHGPLEGPMCKSTCPHQ*SRWPGC Trigger: GCACCCTGGCCATCGACTTCATTGATGAGGGCAGGT...GGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
||
| CDS-3UTR TCA 90 bp | CGACGAGCATACCACTCCTGGCAGTATAGGCTGACCTGGATGCCCTGGCCCATGAGAGGCGGCCCAGGATaGAGCAGGCATAGAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRAYHSWQYRLTWMPWPMRGGPG*SRHRAN Trigger: GTTTGCTCTATGCCTGCTTCATCCTGGGCCGCCTCT...CATGGGCCAGGGCATCCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
||
| CDS-3UTR TCA 90 bp | ACTCATGAACCACCGCAGACACCAGGAACACTCCCAGCATGGCCACCCCGCGAGTGCCCTCACCTCCTCTaGCACAAAAGATCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: THEPPQTPGTLPAWPPRECPHLL*HKRSQA Trigger: TGCCTGGGATCTTTTGTGTCAGAGGAGGTGAGGGCA...CTCGCGGGGTGGCCATGCTGGGAGTGTTCCTGGTGTCTGCGGTGGTTCATGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
||
| CDS-3UTR GCA 90 bp | TACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACTCCACCTGGCCCCGTGGCATaGAAGATGGAGAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLSPHGPLEGPMCKSLTPPGPVA*KMESSR Trigger: TCTGCTGCTCTCCATCTTGCATGCCACGGGGCCAGG...TGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR TCA 90 bp | GACCACAGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCTGCCCTTTCCTCCTCTaGCACAAAAGATCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DHRGGYLSPHGPLEGPMCCPFLL*HKRSQA Trigger: TGCCTGGGATCTTTTGTGTCAGAGGAGGAAAGGGCA...GCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR CCA 90 bp | CACAGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGGTAGCTGGAGAAACTTaGGGGGCTGATGCCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRGGYLSPHGPLEGPMCKVAGET*GADALS Trigger: GGAAAGGGCATCAGCCCCCCAAGTTTCTCCAGCTAC...CTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CCA 90 bp | GACCACAGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCGTTCCCGGCTCATGTTaGCAAAGACAGGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHRGGYLSPHGPLEGPMCVPGSC*QRQGHR Trigger: TCTGTGTCCCTGTCTTTGCCAACATGAGCCGGGAAC...GCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGTACAGCCAGTCATaGACCACGACGTTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGGYLSPHGPLEGPMCKSLYSQS*TTTFQV Trigger: CACCTGGAACGTCGTGGTCCATGACTGGCTGTACAG...GGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CCA 90 bp | TGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACCAGTATAGGCTGACCTaGATGCCCTGGCCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVPESPWPPGRSYVQVPDQYRLT*MPWPMK Trigger: CTTCATGGGCCAGGGCATCCAGGTCAGCCTATACTG...GTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR TCA 90 bp | TCTGAGTCTCCGCACACTTGGAGAGACATGAAGGGAACCTGTGCCCAGTCCACAAAGCTCATGCCTCACTaGCACGTGCACCGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SESPHTWRDMKGTCAQSTKLMPH*HVHRQD Trigger: GTCCTGCCGGTGCACGTGTCAGTGAGGCATGAGCTT...TGTGGACTGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR TCA 90 bp | CCCGTGGCATGCAAGATGGAGAGCAGCAGAGCCCGGGTGCTGAAGGGTTCCCGGTTTTCATCAGCAATCTaGCCTGCTCAAAGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVACKMESSRARVLKGSRFSSAI*PAQRPA Trigger: TGCTGGTCTTTGAGCAGGTCAGATTGCTGATGAAAA...CCGGGAACCCTTCAGCACCCGGGCTCTGCTGCTCTCCATCTTGCATGCCACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
||
| CDS-3UTR TCA 90 bp | GACCACAGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCCAGAAGATATACTCATaGACCACCGCAGACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DHRGGYLSPHGPLEGPMCQKIYS*TTADTR Trigger: CCTGGTGTCTGCGGTGGTTCATGAGTATATCTTCTG...GCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR GCA 90 bp | TGCTCGAGTCACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACGGTTCCGTGTGTCCTTaGGTTCCCTTCTCCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CSSHTILSLWSADHRGGYGSVCP*VPFSST Trigger: CGTGGAGGAGAAGGGAACGCAAGGACACACGGAACC...GTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTGACTCGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR TCA 90 bp | CACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACCTGAGTCCCCGCATAGGCCCGCTATaGACATGTGGTAGATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTILSLWSADHRGGYLSPRIGPL*TCGRWF Trigger: GAACCATCTACCACATGTTCATAGCGGGCCTATGCG...GGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCCTGGCCCATGAAGAGAAAGGTCCACATCAGGATGTTCCAGGCTGGACCTACCTGCCCTCATCAATaGAGTCGATGGCCAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPWPMKRKVHIRMFQAGPTCPHQ*SRWPGC Trigger: GCACCCTGGCCATCGACTTCATTGATGAGGGCAGGT...AGGTCCAGCCTGGAACATCCTGATGTGGACCTTTCTCTTCATGGGCCAGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACAGGTGCGGTAGTAGTTaGAGAAGGAAGTCGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WVPESPWPPGRSYVQVPDRCGSS*RRKSSS Trigger: GGAACTCGACTTCCTTCTCCAACTACTACCGCACCT...GTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CCA 90 bp | TGCTCGAGTCACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACCTGACCTGGATGCCCTaGCCCATGAAGAGAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSSHTILSLWSADHRGGYLTWMP*PMKRKV Trigger: GACCTTTCTCTTCATGGGCCAGGGCATCCAGGTCAG...GTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTGACTCGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR GCA 90 bp | CACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACCTGAGTCCCATATGTCGAGTCCATTaGACCAAGTCTGGGGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTILSLWSADHRGGYLSPICRVH*TKSGVP Trigger: CGGAACCCCAGACTTGGTGCAATGGACTCGACATAT...GGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
||
| CDS-3UTR GCA 90 bp | GGAACCCTGGCTCTGGGCTTTGCAGGCAGAGAAGAGCTTGATGCTGTCATCTGTGCGTTGAGCCAGCAGTaGAGGAAGGCGAAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GTLALGFAGREELDAVICALSQQ*RKAKKM Trigger: CATCTTCTTCGCCTTCCTGCACTGCTGGCTCAACGC...ACAGATGACAGCATCAAGCTCTTCTCTGCCTGCAAAGCCCAGAGCCAGGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CCA 90 bp | ATGCCCTGGCCCATGAAGAGAAAGGTCCACATCAGGATGTTCCAGGCTGGACCTCTTGCTTGTAGAATCTaGGGCAGCGGAGGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPWPMKRKVHIRMFQAGPLACRI*GSGGKR Trigger: CCTCTTCCCTCCGCTGCCCCAGATTCTACAAGCAAG...AGGTCCAGCCTGGAACATCCTGATGTGGACCTTTCTCTTCATGGGCCAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | GACCACAGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCCCAGGGTGTAACTCTTaGGTCTTGCTTGTAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DHRGGYLSPHGPLEGPMCPGCNS*VLLVES Trigger: AGATTCTACAAGCAAGACCCAAGAGTTACACCCTGG...GCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | CTGGCTCTGGGCTTTGCAGGCAGAGAAGAGCTTGATGCTGTCATCTGTGTAGCACTTGCTTGTAGAATCTaGGGCAGCGGAGGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LALGFAGREELDAVICVALACRI*GSGGKR Trigger: CCTCTTCCCTCCGCTGCCCCAGATTCTACAAGCAAG...TGCTACACAGATGACAGCATCAAGCTCTTCTCTGCCTGCAAAGCCCAGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR TCA 90 bp | TCTGAGTCTCCGCACACTTGGAGAGACATGAAGGGAACCTGTGCCCAGTCCACAGCAGCTGTCCGAAGCTaGAGAGGAGTAAGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SESPHTWRDMKGTCAQSTAAVRS*RGVSQT Trigger: AGTTTGACTTACTCCTCTTCAGCTTCGGACAGCTGC...TGTGGACTGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR GCA 90 bp | CACACCATACTGAGCCTGTGGTCAGCTGACCACAGAGGTGGGTACCTGAGTCCCAACTCTCTCTGTGCTTaGTCCAGAAACTGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTILSLWSADHRGGYLSPNSLCA*SRNCVF Trigger: GAAGACACAGTTTCTGGAGCAAGCACAGAGAGAGTT...GGGACTCAGGTACCCACCTCTGTGGTCAGCTGACCACAGGCTCAGTATGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CCA 90 bp | TACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCTGACTCCACCAGGGTGTAACTCTTaGGTCTTGCTTGTAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: YLSPHGPLEGPMCKSLTPPGCNS*VLLVES Trigger: AGATTCTACAAGCAAGACCCAAGAGTTACACCCTGG...TGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTGGGCTTTGCAGGCAGAGAAGAGCTTGATGCTGTCATCTGTGTAGCAATATGTCGAGTCCATTaGACCAAGTCTGGGGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LALGFAGREELDAVICVAICRVH*TKSGVP Trigger: CGGAACCCCAGACTTGGTGCAATGGACTCGACATAT...TGCTACACAGATGACAGCATCAAGCTCTTCTCTGCCTGCAAAGCCCAGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTGGGCTTTGCAGGCAGAGAAGAGCTTGATGCTGTCATCTGTGTAGCAATCAGCAATCTGACCTaGTCAAAGACCAGCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LALGFAGREELDAVICVAISNLT*SKTSTQ Trigger: CTGCGTGCTGGTCTTTGAGCAGGTCAGATTGCTGAT...TGCTACACAGATGACAGCATCAAGCTCTTCTCTGCCTGCAAAGCCCAGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR TCA 90 bp | CTGGCTCTGGGCTTTGCAGGCAGAGAAGAGCTTGATGCTGTCATCTGTGTAGCATTTTCATCAGCAATCTaGCCTGCTCAAAGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LALGFAGREELDAVICVAFSSAI*PAQRPA Trigger: TGCTGGTCTTTGAGCAGGTCAGATTGCTGATGAAAA...TGCTACACAGATGACAGCATCAAGCTCTTCTCTGCCTGCAAAGCCCAGAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR GCA 90 bp | CGGGTAGAAGAACCCCAGGACGAAGCAGAAGATATACTCATGAACCACCGCAGATGCCAACTCTCTCTGTaGTTGCTCCAGAAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVEEPQDEAEDILMNHRRCQLSL*LLQKLC Trigger: ACACAGTTTCTGGAGCAAGCACAGAGAGAGTTGGCA...TCTGCGGTGGTTCATGAGTATATCTTCTGCTTCGTCCTGGGGTTCTTCTACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| CDS-3UTR TCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGTCCGAGACTAAGATTTTTATTAGAGGCGGCCCAGGATaGAGCAGGCATAGAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQSETKIFIRGGPG*SRHRAN Trigger: GTTTGCTCTATGCCTGCTTCATCCTGGGCCGCCTCT...AATAAAAATCTTAGTCTCGGACTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR TCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGTCCGAGACTAAGATTTTTATTCGCATAGGCCCGCTATaGACATGTGGTAGATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQSETKIFIRIGPL*TCGRWF Trigger: GAACCATCTACCACATGTTCATAGCGGGCCTATGCG...AATAAAAATCTTAGTCTCGGACTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR GCA 90 bp | GATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTGCCACGACGTTCCAGGTaGGGTAGTAGTTGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFYCCIGRSRKNQTCQTLPRRSR*GSSWRR Trigger: CCTTCTCCAACTACTACCGCACCTGGAACGTCGTGG...CAAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR CCA 90 bp | GATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTGCGAGCATACCACTCCTaGCAGTATAGGCTGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFYCCIGRSRKNQTCQTLRAYHS*QYRLTW Trigger: CCAGGTCAGCCTATACTGCCAGGAGTGGTATGCTCG...CAAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR TCA 90 bp | GATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTGGGAATAGCATCAGCATaGCCGGGTAGAAGAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFYCCIGRSRKNQTCQTLGIASA*PGRRTP Trigger: TGGGGTTCTTCTACCCGGTCATGCTGATGCTATTCC...CAAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CCA 90 bp | AGATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTCAGCATGAAGATGCCTaGCCCCGTGGCATGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFLLLHWEKQKEPNVSDFQHEDA*PRGMQD Trigger: ATCTTGCATGCCACGGGGCCAGGCATCTTCATGCTG...AAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR GCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGTCCGAGACTAAGATTTTTATTAACTCTCTCTGTGCTTaGTCCAGAAACTGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQSETKIFINSLCA*SRNCVF Trigger: GAAGACACAGTTTCTGGAGCAAGCACAGAGAGAGTT...AATAAAAATCTTAGTCTCGGACTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CCA 90 bp | AGATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTAAACAGCCCAGGACCTaGGCAAAGTTCTTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RFLLLHWEKQKEPNVSDFKQPRT*AKFLAT Trigger: TGTGGCCAAGAACTTTGCCCAGGTCCTGGGCTGTTT...AAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| 3UTR CAA 72 bp | AGCCATCTCTCCAGTCCGAGACTAAGATTTTTATTGTaGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLSSPRLRFLL*HWEKQKEPNVS Trigger: TGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCTTAGTCTCGGACTGGAGAGATGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR GCA 90 bp | AGATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTTGCCAACTCTCTCTGTaGTTGCTCCAGAAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFLLLHWEKQKEPNVSDFCQLSL*LLQKLC Trigger: ACACAGTTTCTGGAGCAAGCACAGAGAGAGTTGGCA...AAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS GCA 90 bp | AGCACGCAGCGCGAGGCGGGCGGAAGCTCATGCCTCACTGACACGTaGACCGGCAGGACGCAGAGCACCACAGCGTGGGCAGCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STQREAGGSSCLTDT*TGRTQSTTAWAASR Trigger: TCTGCTGGCTGCCCACGCTGTGGTGCTCTGCGTCCTGCCGGTGCACGTGTCAGTGAGGCATGAGCTTCCGCCCGCCTCGCGCTGCGTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
||
| CDS TCA 90 bp | AAAGACCAGCACGCAGCGCGAGGCGGGCGGAAGCTCATGCCTCACTaGCACGTGCACCGGCAGGACGCAGAGCACCACAGCGTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KDQHAARGGRKLMPH*HVHRQDAEHHSVGS Trigger: GCTGCCCACGCTGTGGTGCTCTGCGTCCTGCCGGTGCACGTGTCAGTGAGGCATGAGCTTCCGCCCGCCTCGCGCTGCGTGCTGGTCTTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
||
| CDS GCA 90 bp | ACCTGCTCAAAGACCAGCACGCAGCGCGAGGCGGGCGGAAGCTCATaGCTCACTGACACGTGCACCGGCAGGACGCAGAGCACCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TCSKTSTQREAGGSS*LTDTCTGRTQSTTA Trigger: CGCTGTGGTGCTCTGCGTCCTGCCGGTGCACGTGTCAGTGAGGCATGAGCTTCCGCCCGCCTCGCGCTGCGTGCTGGTCTTTGAGCAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
||
| CDS TCA 90 bp | CTGGCCCCGTGGCATGCAAGATGGAGAGCAGCAGAGCCCGGGTGCTaGAGGGTTCCCGGCTCATGTTGGCAAAGACAGGGACACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPWHARWRAAEPGC*RVPGSCWQRQGHRG Trigger: GCCTCTGTGTCCCTGTCTTTGCCAACATGAGCCGGGAACCCTTCAGCACCCGGGCTCTGCTGCTCTCCATCTTGCATGCCACGGGGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS TCA 90 bp | CAGGCACAGTCTCTCTCAGGAAGGAGTAGCTTTTCATCAGCAATCTaGCCTGCTCAAAGACCAGCACGCAGCGCGAGGCGGGCGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QAQSLSGRSSFSSAI*PAQRPARSARRAEA Trigger: AGCTTCCGCCCGCCTCGCGCTGCGTGCTGGTCTTTGAGCAGGTCAGATTGCTGATGAAAAGCTACTCCTTCCTGAGAGAGACTGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
||
| CDS CCA 90 bp | CTGTGTCTTCACAGCCTCCATATGTCGAGTCCATTGCACCAAGTCTaGGGTTCCGTGTGTCCTTGCGTTCCCTTCTCCTCCACGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCLHSLHMSSPLHQV*GSVCPCVPFSSTGS Trigger: GGAGCCCGTGGAGGAGAAGGGAACGCAAGGACACACGGAACCCCAGACTTGGTGCAATGGACTCGACATATGGAGGCTGTGAAGACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
||
| CDS-3UTR CAA 90 bp | GCTGACCACAGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGCAACTCTCTCTGTGCTaGCTCCAGAAACTGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ADHRGGYLSPHGPLEGPMQLSLC*LQKLCL Trigger: AAGACACAGTTTCTGGAGCAAGCACAGAGAGAGTTG...CATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCTGTGGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGGGTACCTGAGTCCCCATGGCCCCCTGGAAGGTCCTATGTGCAAGTCCCAACTCTCTCTGTGCTaGCTCCAGAAACTGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: RGGYLSPHGPLEGPMCKSQLSLC*LQKLCL Trigger: AAGACACAGTTTCTGGAGCAAGCACAGAGAGAGTTG...GGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGACTCAGGTACCCACCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTCTGGGCTTTGCAGGCAGAGAAGAGCTTGATGCTGTCATCTGTGTAGCAGGTTCCCGGCTCATGTaGGCAAAGACAGGGACACAG | + |
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Preference number: 5 (lower is better) Translates to: LALGFAGREELDAVICVAGSRLM*AKTGTQ Trigger: CTGTGTCCCTGTCTTTGCCAACATGAGCCGGGAACC...TGCTACACAGATGACAGCATCAAGCTCTTCTCTGCCTGCAAAGCCCAGAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS TCA 90 bp | ACATGGGAACCCAGGTCATCAGCGCCAAGGGCAGCTGTCCGAAGCTaGAGAGGAGTAAGTCAAACTCCAGCATCAACCTGCCCTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: TWEPRSSAPRAAVRS*RGVSQTPASTCPHQ Trigger: TTGATGAGGGCAGGTTGATGCTGGAGTTTGACTTACTCCTCTTCAGCTTCGGACAGCTGCCCTTGGCGCTGATGACCTGGGTTCCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCAGGGGACAGTGTCGACGAGCATACCACTCCTGGCAGTATAGGCTGACCTCATCGATCAGTGACTaGCGGGTGATGAAAACTTTC | + |
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Preference number: 5 (lower is better) Translates to: WGRGQCRRAYHSWQYRLTSSISD*RVMKTF Trigger: GAAAGTTTTCATCACCCGCAAGTCACTGATCGATGA...GGTCAGCCTATACTGCCAGGAGTGGTATGCTCGTCGACACTGTCCCCTGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160465.2 |
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| CDS GCA 90 bp | TGCTCCAGAAACTGTGTCTTCACAGCCTCCATATGTCGAGTCCATTaGACCAAGTCTGGGGTTCCGTGTGTCCTTGCGTTCCCTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: CSRNCVFTASICRVH*TKSGVPCVLAFPSP Trigger: AGGAGAAGGGAACGCAAGGACACACGGAACCCCAGACTTGGTGCAATGGACTCGACATATGGAGGCTGTGAAGACACAGTTTCTGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS GCA 90 bp | TCCCATAGGGCCCGATCCAACAGCTCTGCCAACTCTCTCTGTGCTTaGTCCAGAAACTGTGTCTTCACAGCCTCCATATGTCGAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SHRARSNSSANSLCA*SRNCVFTASICRVH Trigger: ATGGACTCGACATATGGAGGCTGTGAAGACACAGTTTCTGGAGCAAGCACAGAGAGAGTTGGCAGAGCTGTTGGATCGGGCCCTATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS-3UTR CAA 90 bp | TCTGAGTCTCCGCACACTTGGAGAGACATGAAGGGAACCTGTGCCCAGTCCACAGAGCCACAGCCCATCTaGATACACATAGCTGTACAG | + |
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Preference number: 5 (lower is better) Translates to: SESPHTWRDMKGTCAQSTEPQPI*IHIAVQ Trigger: CTGTACAGCTATGTGTATCAAGATGGGCTGTGGCTC...TGTGGACTGGGCACAGGTTCCCTTCATGTCTCTCCAAGTGTGCGGAGACTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR CAA 90 bp | AGATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTATCTCGGCGAAGGCGTaGAGCCAGCAGTGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RFLLLHWEKQKEPNVSDFISAKA*SQQCRK Trigger: CTTCCTGCACTGCTGGCTCAACGCCTTCGCCGAGAT...AAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS-3UTR CAA 90 bp | AGATTTTTATTGTTGCATTGGGAGAAGCAGAAAGAACCAAACGTGTCAGACTTTTCATCGATCAGTGACTaGCGGGTGATGAAAACTTTC | + |
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Preference number: 5 (lower is better) Translates to: RFLLLHWEKQKEPNVSDFSSISD*RVMKTF Trigger: GAAAGTTTTCATCACCCGCAAGTCACTGATCGATGA...AAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAACAATAAAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS CCA 72 bp | TGGCCCCCAGCATCCAGGCACCCCCAGCGCGCGGCCTaGCCCACAGCCACAGGGTCTGGTAGGGCACTAGGA | + |
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Preference number: 6 (lower is better) Translates to: WPPASRHPQRAA*PTATGSGRALG Trigger: TCCTAGTGCCCTACCAGACCCTGTGGCTGTGGGCCAGGCCGCGCGCTGGGGGTGCCTGGATGCTGGGGGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS TCA 72 bp | CACGCAGCGCGAGGCGGGCGGAAGCTCATGCCTCACTaGCACGTGCACCGGCAGGACGCAGAGCACCACAGC | + |
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Preference number: 6 (lower is better) Translates to: HAARGGRKLMPH*HVHRQDAEHHS Trigger: GCTGTGGTGCTCTGCGTCCTGCCGGTGCACGTGTCAGTGAGGCATGAGCTTCCGCCCGCCTCGCGCTGCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS GCA 72 bp | CGCGAGGCGGGCGGAAGCTCATGCCTCACTGACACGTaGACCGGCAGGACGCAGAGCACCACAGCGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: REAGGSSCLTDT*TGRTQSTTAWA Trigger: TGCCCACGCTGTGGTGCTCTGCGTCCTGCCGGTGCACGTGTCAGTGAGGCATGAGCTTCCGCCCGCCTCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS TCA 72 bp | TGGCATGCAAGATGGAGAGCAGCAGAGCCCGGGTGCTaGAGGGTTCCCGGCTCATGTTGGCAAAGACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: WHARWRAAEPGC*RVPGSCWQRQG Trigger: TCCCTGTCTTTGCCAACATGAGCCGGGAACCCTTCAGCACCCGGGCTCTGCTGCTCTCCATCTTGCATGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS GCA 72 bp | AGTCCATTGCACCAAGTCTGGGGTTCCGTGTGTCCTTaGGTTCCCTTCTCCTCCACGGGCTCCCTTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPLHQVWGSVCP*VPFSSTGSLLL Trigger: CAGGAGAAGGGAGCCCGTGGAGGAGAAGGGAACGCAAGGACACACGGAACCCCAGACTTGGTGCAATGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS CAA 72 bp | GAGTCCATTGCACCAAGTCTGGGGTTCCGTGTGTCCTaGCGTTCCCTTCTCCTCCACGGGCTCCCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ESIAPSLGFRVS*RSLLLHGLPSP Trigger: AGGAGAAGGGAGCCCGTGGAGGAGAAGGGAACGCAAGGACACACGGAACCCCAGACTTGGTGCAATGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS TCA 72 bp | TCTCTCTCAGGAAGGAGTAGCTTTTCATCAGCAATCTaGCCTGCTCAAAGACCAGCACGCAGCGCGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SLSGRSSFSSAI*PAQRPARSARR Trigger: CCGCCTCGCGCTGCGTGCTGGTCTTTGAGCAGGTCAGATTGCTGATGAAAAGCTACTCCTTCCTGAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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| CDS TCA 72 bp | GGACCTGGGCAAAGTTCTTGGCCACATAGTTCCACCTaGTGCTGGGTGTCCTGGGGTATGTCTCTCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GPGQSSWPHSST*CWVSWGMSLCR Trigger: TCTACAGAGAGACATACCCCAGGACACCCAGCATCAGGTGGAACTATGTGGCCAAGAACTTTGCCCAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS CAA 90 bp | TTGCTCCAGAAACTGTGTCTTCACAGCCTCCATATGTCGAGTCCATaGCACCAAGTCTGGGGTTCCGTGTGTCCTTGCGTTCCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLQKLCLHSLHMSSP*HQVWGSVCPCVPFS Trigger: GGAGAAGGGAACGCAAGGACACACGGAACCCCAGACTTGGTGCAATGGACTCGACATATGGAGGCTGTGAAGACACAGTTTCTGGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS GCA 72 bp | AACTGTGTCTTCACAGCCTCCATATGTCGAGTCCATTaGACCAAGTCTGGGGTTCCGTGTGTCCTTGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: NCVFTASICRVH*TKSGVPCVLAF Trigger: GAACGCAAGGACACACGGAACCCCAGACTTGGTGCAATGGACTCGACATATGGAGGCTGTGAAGACACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS CAA 72 bp | AAACTGTGTCTTCACAGCCTCCATATGTCGAGTCCATaGCACCAAGTCTGGGGTTCCGTGTGTCCTTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: KLCLHSLHMSSP*HQVWGSVCPCV Trigger: AACGCAAGGACACACGGAACCCCAGACTTGGTGCAATGGACTCGACATATGGAGGCTGTGAAGACACAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023806.14 |
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| CDS CAA 72 bp | AAATGTTGCACCTCCATTAGCTCATCGATCAGTGACTaGCGGGTGATGAAAACTTTCCGTTTTCCAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: KCCTSISSSISD*RVMKTFRFPGC Trigger: ACACCCTGGAAAACGGAAAGTTTTCATCACCCGCAAGTCACTGATCGATGAGCTAATGGAGGTGCAACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023806.14 ENSMUST00000160465.2 |
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