Pregenerated sensors for SOAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026600Ensembl transcript IDs: ENSMUST00000051396.13, ENSMUST00000187507.7, ENSMUST00000189661.7
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCTCTCTTCTGTAAGTCCCCTGGCTGTCGGAATCCAGAGCCCCTaGATCAGCCACCTCCCTACTGGCTCTCAACCTTGGTGTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: ALSSVSPLAVGIQSP*ISHLPTGSQPWCSQ Trigger: CTGAGAACACCAAGGTTGAGAGCCAGTAGGGAGGTGGCTGATGCAGGGGCTCTGGATTCCGACAGCCAGGGGACTTACAGAAGAGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CCA 90 bp | CCAGTACAGCTCCCCATCAATGAGACACACACCACTACCAGACCCTaGGTGCCATCTTCTCACCTGAAGGAAAGTGCTCCAGCAGCGGGG | + |
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Preference number: 1 (lower is better) Translates to: PVQLPINETHTTTRP*VPSSHLKESAPAAG Trigger: CCCCGCTGCTGGAGCACTTTCCTTCAGGTGAGAAGATGGCACCCAGGGTCTGGTAGTGGTGTGTGTCTCATTGATGGGGAGCTGTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CCA 90 bp | AGTAGACCAGAACTTTCAGAAAAATACAGTGGAAGGCCTGGGCTGTaGCTCAGGGTGCTGTCCCTGAGCGAGACCCTGGGTTCCACTCCT | + |
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Preference number: 1 (lower is better) Translates to: SRPELSEKYSGRPGL*LRVLSLSETLGSTP Trigger: AGGAGTGGAACCCAGGGTCTCGCTCAGGGACAGCACCCTGAGCCACAGCCCAGGCCTTCCACTGTATTTTTCTGAAAGTTCTGGTCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR CCA 90 bp | ATCCAGAGCCCCTGCATCAGCCACCTCCCTACTGGCTCTCAACCTTaGTGTTCTCAGGGAAGGAGAGAATCTCTACCAACCGAGAATCAC | + |
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Preference number: 1 (lower is better) Translates to: IQSPCISHLPTGSQP*CSQGRRESLPTENH Trigger: GTGATTCTCGGTTGGTAGAGATTCTCTCCTTCCCTGAGAACACCAAGGTTGAGAGCCAGTAGGGAGGTGGCTGATGCAGGGGCTCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CCA 90 bp | CCCCAAACACCGCAGTGTGGGGATTCAGTAACCGCTGAAGACGGCTaGCTCGGAATCAGGAAGAATATCCAATCTTCAATGGCAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: PQTPQCGDSVTAEDG*LGIRKNIQSSMASK Trigger: CTTGCTTGCCATTGAAGATTGGATATTCTTCCTGATTCCGAGCCAGCCGTCTTCAGCGGTTACTGAATCCCCACACTGCGGTGTTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR TCA 90 bp | AAGGAAAAAGATATCCAAGTAAGAGATAAGTGTGGTGATTCCGCCTaGTACTCGGGAGACAGGCAGGGGCACTGCACCTGGCACAAACCC | + |
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Preference number: 1 (lower is better) Translates to: KEKDIQVRDKCGDSA*YSGDRQGHCTWHKP Trigger: GGGTTTGTGCCAGGTGCAGTGCCCCTGCCTGTCTCCCGAGTATCAGGCGGAATCACCACACTTATCTCTTACTTGGATATCTTTTTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR TCA 90 bp | AGACTTCCCAAAACTGTACGGATGGTTGCCAGGAAACCACCAAAGTaGCTGTGCCATGGGATTTTGTGTGTGAGCAACTTGTACGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RLPKTVRMVARKPPK*LCHGILCVSNLYGS Trigger: TGAGCCGTACAAGTTGCTCACACACAAAATCCCATGGCACAGTCACTTTGGTGGTTTCCTGGCAACCATCCGTACAGTTTTGGGAAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR TCA 90 bp | CACGAACACACACAATTTAAAAACAGCTTTTTCTCCTGTGACTCCTaGCATGCAGACCCAAGACACGAAGGCACAGTCCAATGGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: HEHTQFKNSFFSCDS*HADPRHEGTVQWQG Trigger: GCCCTGCCATTGGACTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGTTTTTAAATTGTGTGTGTTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CCA 90 bp | AACTGTACGGATGGTTGCCAGGAAACCACCAAAGTGACTGTGCCATaGGATTTTGTGTGTGAGCAACTTGTACGGCTCATTTCTTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: NCTDGCQETTKVTVP*DFVCEQLVRLISLG Trigger: GCCCAAAGAAATGAGCCGTACAAGTTGCTCACACACAAAATCCCATGGCACAGTCACTTTGGTGGTTTCCTGGCAACCATCCGTACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR TCA 90 bp | CAGCCCTATGTAGATAACATTGTGTCTGTTTTACCTGAAGGGGCTTaGGAGAGGGTCACTTGTAGCCAAGGCTGGTCTCCAACTTCAACT | + |
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Preference number: 1 (lower is better) Translates to: QPYVDNIVSVLPEGA*ERVTCSQGWSPTST Trigger: AGTTGAAGTTGGAGACCAGCCTTGGCTACAAGTGACCCTCTCTCAAGCCCCTTCAGGTAAAACAGACACAATGTTATCTACATAGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR TCA 90 bp | CAGCTAATTGTTTTTATCTGCTGCTATCTCAGCTTCCTGTTGAGTTaGAGGTGGAGGAGGGCTCCAATCTCTCTGTTTCAACAGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: QLIVFICCYLSFLLS*RWRRAPISLFQQPA Trigger: AGCTGGCTGTTGAAACAGAGAGATTGGAGCCCTCCTCCACCTTCAACTCAACAGGAAGCTGAGATAGCAGCAGATAAAAACAATTAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR GCA 90 bp | AGGGGGAAGGGTGGCCATGATCAGTCCAACATTGGAATGGAGAACTaGTACAAAGTAATGCCCTTTCCTAAAAATGCATATCTAGTACTT | + |
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Preference number: 1 (lower is better) Translates to: RGKGGHDQSNIGMEN*YKVMPFPKNAYLVL Trigger: AAGTACTAGATATGCATTTTTAGGAAAGGGCATTACTTTGTAGCAGTTCTCCATTCCAATGTTGGACTGATCATGGCCACCCTTCCCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CCA 90 bp | TTATCAAGGGGCTATGGTTCTGTGACAACACAGAACACTATTGTTTaGGAACAAAGAACTGACAGAAACAGCCACTATTCATCCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LSRGYGSVTTQNTIV*EQRTDRNSHYSSPA Trigger: TGCTGGGGATGAATAGTGGCTGTTTCTGTCAGTTCTTTGTTCCCAAACAATAGTGTTCTGTGTTGTCACAGAACCATAGCCCCTTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR GCA 90 bp | GGTCAACATGAGTTCCAGGATAGACAGAGATATGAAGAGTCACCCTaGTTCAAAAACAAACAAAGAACAACAGAAACAAACAGCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: GQHEFQDRQRYEESP*FKNKQRTTETNSTR Trigger: TCTGGTGCTGTTTGTTTCTGTTGTTCTTTGTTTGTTTTTGAAGCAGGGTGACTCTTCATATCTCTGTCTATCCTGGAACTCATGTTGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CCA 90 bp | AACAAAACAACACACACAAGCCTTTACAGACTTATCAAGGGGCTATaGTTCTGTGACAACACAGAACACTATTGTTTGGGAACAAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: NKTTHTSLYRLIKGL*FCDNTEHYCLGTKN Trigger: GTTCTTTGTTCCCAAACAATAGTGTTCTGTGTTGTCACAGAACCATAGCCCCTTGATAAGTCTGTAAAGGCTTGTGTGTGTTGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCGGAATCCAGAGCCCCTGCATCAGCCACCTCCCTACTGGCTCTCAACCGTACATTTTCCACACTaGCAAATGCTGCAGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: GCRNPEPLHQPPPYWLSTVHFPH*QMLQLL Trigger: CAGTAACTGCAGCATTTGGCAGTGTGGAAAATGTAC...GGTTGAGAGCCAGTAGGGAGGTGGCTGATGCAGGGGCTCTGGATTCCGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCTCAGAAGCCAGCTTCTaGAGCCTTAGGAGCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: AVSARPSALQQPYEEAPISEASF*SLRSHF Trigger: AAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGA...GATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CAA 90 bp | AATCCAGAGCCCCTGCATCAGCCACCTCCCTACTGGCTCTCAACCTaGGTGTTCTCAGGGAAGGAGAGAATCTCTACCAACCGAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: NPEPLHQPPPYWLST*VFSGKERISTNRES Trigger: TGATTCTCGGTTGGTAGAGATTCTCTCCTTCCCTGAGAACACCAAGGTTGAGAGCCAGTAGGGAGGTGGCTGATGCAGGGGCTCTGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCCTCACATCCGGATTACAAGTaGGCATCACCCTATCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: FLPGPVLCSNPMRKLPSSHPDYK*ASPYPV Trigger: AACTGGATAGGGTGATGCGCACTTGTAATCCGGATG...TGAGGATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCTTTTATGTAATGTCTTGTCTGACAGAGGGCCTAGCGCTCCATTGCCGAATACAGTGGAAGGCCTaGGCTGTGGCTCAGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: MGFYVMSCLTEGLALHCRIQWKA*AVAQGA Trigger: AGCACCCTGAGCCACAGCCCAGGCCTTCCACTGTAT...TCGGCAATGGAGCGCTAGGCCCTCTGTCAGACAAGACATTACATAAAAGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAGCACCAGAAATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGTCAGGGTGCTGTCCCTaGGCGAGACCCTGGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TNSTRNSSLSVLIKSNPRSGCCP*ARPWVP Trigger: TGGAACCCAGGGTCTCGCTCAGGGACAGCACCCTGA...CCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATTTCTGGTGCTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCCTGAAAGCTATAAAGCATTGCTTATGCTGTCAGAAGTCCTCAGGAGGTCCTAGGGCCCAGCTATaGAATGTGCACACTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LPLKAIKHCLCCQKSSGGPRAQL*NVHTGS Trigger: AGAACCAGTGTGCACATTTCATAGCTGGGCCCTAGG...ACCTCCTGAGGACTTCTGACAGCATAAGCAATGCTTTATAGCTTTCAGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTTTTTCTCCTGTGACTCCTGACATGCAGACCCAAGACACGAAGGCACAGAACTGTACGGATGGTTaGCAGGAAACCACCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TAFSPVTPDMQTQDTKAQNCTDG*QETTKV Trigger: CACTTTGGTGGTTTCCTGGCAACCATCCGTACAGTT...CTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTTTTCTCCTGTGACTCCTGACATGCAGACCCAAGACACGAAGGCACAGCTTCTTTCACAGAAGTaGCCACCTCGTTTGGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: TAFSPVTPDMQTQDTKAQLLSQK*PPRLGF Trigger: AAACCCCAAACGAGGTGGCCACTTCTGTGAAAGAAG...CTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGACAGCCCAACTCCAGGTaGATCATCAGAAAGGATAGA | + |
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Preference number: 2 (lower is better) Translates to: TEQMFQKPASGALGAILGQPNSR*IIRKDR Trigger: TCTATCCTTTCTGATGATTCACCTGGAGTTGGGCTG...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | ATGGGCTTTTATGTAATGTCTTGTCTGACAGAGGGCCTAGCGCTCCATTGCCGAGCCATGATGACTCCCTaGTACAGCACAGAAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: MGFYVMSCLTEGLALHCRAMMTP*YSTEKE Trigger: TTCCTTTTCTGTGCTGTATCAGGGAGTCATCATGGC...TCGGCAATGGAGCGCTAGGCCCTCTGTCAGACAAGACATTACATAAAAGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTTTTTCTCCTGTGACTCCTGACATGCAGACCCAAGACACGAAGGCACAGCCCAGCTATGAAATGTaGACACTGGTTCTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: TAFSPVTPDMQTQDTKAQPSYEM*TLVLTT Trigger: AGTGGTTAGAACCAGTGTGCACATTTCATAGCTGGG...CTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGGAAGGCCTGGGCTGTaGCTCAGGGTGCTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KINTSTMDSLVYNKESHYGRPGL*LRVLSL Trigger: CAGGGACAGCACCCTGAGCCACAGCCCAGGCCTTCC...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACTCAGGGTGCTGTCCCTaGGCGAGACCCTGGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: KINTSTMDSLVYNKESHYSGCCP*ARPWVP Trigger: TGGAACCCAGGGTCTCGCTCAGGGACAGCACCCTGA...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCCTCATTCTTTCTTCTCAATTaGACTAGCATACCTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: FLPGPVLCSNPMRKLPSSFFLLN*TSIPLD Trigger: ATCAAGAGGTATGCTAGTGCAATTGAGAAGAAAGAA...TGAGGATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR CAA 90 bp | ACAGCTAATTGTTTTTATCTGCTGCTATCTCAGCTTCCTGTTGAGTaGAAGGTGGAGGAGGGCTCCAATCTCTCTGTTTCAACAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TANCFYLLLSQLPVE*KVEEGSNLSVSTAS Trigger: GCTGGCTGTTGAAACAGAGAGATTGGAGCCCTCCTCCACCTTCAACTCAACAGGAAGCTGAGATAGCAGCAGATAAAAACAATTAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTTTTTCTCCTGTGACTCCTGACATGCAGACCCAAGACACGAAGGCACAGAACCCTGCAAAAATCTaGCATTATCTCAACTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TAFSPVTPDMQTQDTKAQNPAKI*HYLNCQ Trigger: CTGACAGTTGAGATAATGGCAGATTTTTGCAGGGTT...CTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCTTTTATGTAATGTCTTGTCTGACAGAGGGCCTAGCGCTCCATTGCCGAAAAGTGACTGTGCCATaGGATTTTGTGTGTGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: MGFYVMSCLTEGLALHCRKVTVP*DFVCEQ Trigger: TTGCTCACACACAAAATCCCATGGCACAGTCACTTT...TCGGCAATGGAGCGCTAGGCCCTCTGTCAGACAAGACATTACATAAAAGCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | ATGGGCTTTTATGTAATGTCTTGTCTGACAGAGGGCCTAGCGCTCCATTGCCGATCTACTTCTGACCCTTaGATTTGTACTAGCATTGAG | + |
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Preference number: 2 (lower is better) Translates to: MGFYVMSCLTEGLALHCRSTSDP*ICTSIE Trigger: CTCAATGCTAGTACAAATTCAAGGGTCAGAAGTAGA...TCGGCAATGGAGCGCTAGGCCCTCTGTCAGACAAGACATTACATAAAAGCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTTTTCTCCTGTGACTCCTGACATGCAGACCCAAGACACGAAGGCACAGGATATGTTTAGTCTCTaGTTGGATGGAATCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TAFSPVTPDMQTQDTKAQDMFSL*LDGIKE Trigger: TTCCTTGATTCCATCCAACCAGAGACTAAACATATC...CTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACCAGCCCAACTCCAGGTaGATCATCAGAAAGGATAGA | + |
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Preference number: 2 (lower is better) Translates to: TSTMDSLVYNKESHYALDQPNSR*IIRKDR Trigger: TCTATCCTTTCTGATGATTCACCTGGAGTTGGGCTG...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | GAGGACAACCTGGTCAACATGAGTTCCAGGATAGACAGAGATATGAAGAGTCACTTGGGAACAAAGAACTaGCAGAAACAGCCACTATTC | + |
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Preference number: 2 (lower is better) Translates to: EDNLVNMSSRIDRDMKSHLGTKN*QKQPLF Trigger: GAATAGTGGCTGTTTCTGTCAGTTCTTTGTTCCCAA...GTGACTCTTCATATCTCTGTCTATCCTGGAACTCATGTTGACCAGGTTGTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCCTGAAAGCTATAAAGCATTGCTTATGCTGTCAGAAGTCCTCAGGAGGTCAACAACTTTTCCCTTaGATAGAAGGGAAACAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LPLKAIKHCLCCQKSSGGQQLFP*IEGKQV Trigger: TACCTGTTTCCCTTCTATTCAAGGGAAAAGTTGTTG...ACCTCCTGAGGACTTCTGACAGCATAAGCAATGCTTTATAGCTTTCAGGGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACATATCCAATCTTCAATaGCAAGCAAGGAGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TSTMDSLVYNKESHYALDISNLQ*QARRQS Trigger: GCTCTGCCTCCTTGCTTGCCATTGAAGATTGGATAT...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | TGGACCACCACTACTAGGCTAAATTCCATCTTTTTAGGTTATACAGACCAAGTGAGTGGCCACCTCGTTTaGGGTTTTGTATTTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WTTTTRLNSIFLGYTDQVSGHLV*GFVFLR Trigger: CCTCAAAAATACAAAACCCCAAACGAGGTGGCCACT...CACTTGGTCTGTATAACCTAAAAAGATGGAATTTAGCCTAGTAGTGGTGGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAACAATAAACAAACCAGCTTGGAACACACTGCTAGCAAGAGGTTTGGTTTTTTCAGAAAAATACAGTaGAAGGCCTGGGCTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: INNKQTSLEHTASKRFGFFRKIQ*KAWAVA Trigger: AGCCACAGCCCAGGCCTTCCACTGTATTTTTCTGAA...AAAACCAAACCTCTTGCTAGCAGTGTGTTCCAAGCTGGTTTGTTTATTGTTTAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAACAGCACCAGAAATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGTACGGCTCATTTCTTTaGGCAGAAGGTTTGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: TNSTRNSSLSVLIKSNPRYGSFL*AEGLNS Trigger: AGAGTTCAAACCTTCTGCCCAAAGAAATGAGCCGTA...CCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATTTCTGGTGCTGTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | TGGACCACCACTACTAGGCTAAATTCCATCTTTTTAGGTTATACAGACCAAGTGTTATATTATAAACTCTaGCACCTGAGGAGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WTTTTRLNSIFLGYTDQVLYYKL*HLRRLR Trigger: CCTCAGCCTCCTCAGGTGCCAGAGTTTATAATATAA...CACTTGGTCTGTATAACCTAAAAAGATGGAATTTAGCCTAGTAGTGGTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACATATCCAATCTTCAATaGCAAGCAAGGAGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KINTSTMDSLVYNKESHYISNLQ*QARRQS Trigger: GCTCTGCCTCCTTGCTTGCCATTGAAGATTGGATAT...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAACAGCACCAGAAATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGATAAACAAACCAGCTTaGAACACACTGCTAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: TNSTRNSSLSVLIKSNPRINKPA*NTLLAR Trigger: TCTTGCTAGCAGTGTGTTCCAAGCTGGTTTGTTTAT...CCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATTTCTGGTGCTGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| 3UTR-3UTR CCA 90 bp | AATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGCAAGCAATGTTACCCCAGAACACTATTGTTTaGGAACAAAGAACTGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: NSSLSVLIKSNPRQAMLPQNTIV*EQRTDR Trigger: TCTGTCAGTTCTTTGTTCCCAAACAATAGTGTTCTG...GGGTAACATTGCTTGCCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CAA 90 bp | CTCCCATTGGCACAACACGGAATAATAAACAATAAACAAACCAGCTaGGAACACACTGCTAGCAAGAGGTTTGGTTTTATTTTCTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LPLAQHGIINNKQTS*EHTASKRFGFIFSL Trigger: TAAAGAGAAAATAAAACCAAACCTCTTGCTAGCAGTGTGTTCCAAGCTGGTTTGTTTATTGTTTATTATTCCGTGTTGTGCCAATGGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAAACCCTGCAAAAATCTaGCATTATCTCAACTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SRIATKETSRMHNKIIFGNPAKI*HYLNCQ Trigger: CTGACAGTTGAGATAATGGCAGATTTTTGCAGGGTT...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGATATGTTTAGTCTCTaGTTGGATGGAATCAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KINTSTMDSLVYNKESHYDMFSL*LDGIKE Trigger: TTCCTTGATTCCATCCAACCAGAGACTAAACATATC...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | ACACCACTACCAGACCCTGGGTGCCATCTTCTCACCTaGAGGAAAGTGCTCCAGCAGCGGGGCATGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPLPDPGCHLLT*RKVLQQRGMLK Trigger: CTTCAGCATGCCCCGCTGCTGGAGCACTTTCCTTCAGGTGAGAAGATGGCACCCAGGGTCTGGTAGTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | CGGAATCCAGAGCCCCTGCATCAGCCACCTCCCTACTaGCTCTCAACCTTGGTGTTCTCAGGGAAGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNPEPLHQPPPY*LSTLVFSGKER Trigger: TCTCTCCTTCCCTGAGAACACCAAGGTTGAGAGCCAGTAGGGAGGTGGCTGATGCAGGGGCTCTGGATTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCGAGGTCCACACTAGCTaGGTTGCAGAGAAAGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: AVSARPSALQQPYEEAPIEVHTS*VAEKDL Trigger: AAGGTCTTTCTCTGCAACCAAGCTAGTGTGGACCTC...GATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | GCCCCAAACACCGCAGTGTGGGGATTCAGTAACCGCTaGAGACGGCTGGCTCGGAATCAGGAAGAATATCCA | + |
|
Preference number: 3 (lower is better) Translates to: APNTAVWGFSNR*RRLARNQEEYP Trigger: TGGATATTCTTCCTGATTCCGAGCCAGCCGTCTTCAGCGGTTACTGAATCCCCACACTGCGGTGTTTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR GCA 72 bp | GTAATGTCTTGTCTGACAGAGGGCCTAGCGCTCCATTaGCGAACTGAAGCTGTAGGGACATTGCGCCCGACA | + |
|
Preference number: 3 (lower is better) Translates to: VMSCLTEGLALH*RTEAVGTLRPT Trigger: TGTCGGGCGCAATGTCCCTACAGCTTCAGTTCGGCAATGGAGCGCTAGGCCCTCTGTCAGACAAGACATTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | GCCAGGCATGGAGATGTCTTCTGTGATCCTAGCACTTaGGACACAGGAGGTCAGGGGTTCAAGACCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARHGDVFCDPST*DTGGQGFKTSQ Trigger: CTGACTGGTCTTGAACCCCTGACCTCCTGTGTCCCAAGTGCTAGGATCACAGAAGACATCTCCATGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | CCACCTCTGAAATCCCATCCCCTTGCTTCAGAAGCCTaGCTTATAACCAAGTCCCTGGCCGGTCTGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPLKSHPLASEA*LITKSLAGLFP Trigger: AGGGAACAGACCGGCCAGGGACTTGGTTATAAGCCAGGCTTCTGAAGCAAGGGGATGGGATTTCAGAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | CCCTGCATCAGCCACCTCCCTACTGGCTCTCAACCTTaGTGTTCTCAGGGAAGGAGAGAATCTCTACCAACC | + |
|
Preference number: 3 (lower is better) Translates to: PCISHLPTGSQP*CSQGRRESLPT Trigger: GGTTGGTAGAGATTCTCTCCTTCCCTGAGAACACCAAGGTTGAGAGCCAGTAGGGAGGTGGCTGATGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | TGTTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATaGGGAAGCTCCCATCCTCATCTTACAGACGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CFCQAQCSAATL*GSSHPHLTDEE Trigger: TTCCTCGTCTGTAAGATGAGGATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | GATATCCAAGTAAGAGATAAGTGTGGTGATTCCGCCTaGTACTCGGGAGACAGGCAGGGGCACTGCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DIQVRDKCGDSA*YSGDRQGHCTW Trigger: CCAGGTGCAGTGCCCCTGCCTGTCTCCCGAGTATCAGGCGGAATCACCACACTTATCTCTTACTTGGATATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | CTCCCCATCAATGAGACACACACCACTACCAGACCCTaGGTGCCATCTTCTCACCTGAAGGAAAGTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPINETHTTTRP*VPSSHLKESAP Trigger: TGGAGCACTTTCCTTCAGGTGAGAAGATGGCACCCAGGGTCTGGTAGTGGTGTGTGTCTCATTGATGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCCTCACTGTGCCATGGGATTTaGTGTGTGAGCAACTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: FLPGPVLCSNPMRKLPSSLCHGI*CVSNLY Trigger: GTACAAGTTGCTCACACACAAAATCCCATGGCACAG...TGAGGATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | AATCACGAAGTGGGCTTCCCACAGCCCAACTCCAGGTaGATCATCAGAAAGGATAGAGAGCCCCAAACACCG | + |
|
Preference number: 3 (lower is better) Translates to: NHEVGFPQPNSR*IIRKDREPQTP Trigger: CGGTGTTTGGGGCTCTCTATCCTTTCTGATGATTCACCTGGAGTTGGGCTGTGGGAAGCCCACTTCGTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | AGGTGCCGCCCACTCAATAATCCTAGGGCCCAGCTATaGAATGTGCACACTGGTTCTAACCACTGGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RCRPLNNPRAQL*NVHTGSNHWVS Trigger: TGACACCCAGTGGTTAGAACCAGTGTGCACATTTCATAGCTGGGCCCTAGGATTATTGAGTGGGCGGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | TGCTTGCCCAGCATGCACAAGGCCATGATGACTCCCTaGTACAGCACAGAAAAGGAACTGATTCTGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CLPSMHKAMMTP*YSTEKELILPL Trigger: CAGGGGCAGAATCAGTTCCTTTTCTGTGCTGTATCAGGGAGTCATCATGGCCTTGTGCATGCTGGGCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR GCA 72 bp | GATTACAGGAGCTTGTCACCCCATCCGGATTACAAGTaGGCATCACCCTATCCAGTTTATGCCGTTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DYRSLSPHPDYK*ASPYPVYAVVA Trigger: TGCCACAACGGCATAAACTGGATAGGGTGATGCGCACTTGTAATCCGGATGGGGTGACAAGCTCCTGTAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR GCA 72 bp | CTGATTCTGCCCCTGAAAGCTATAAAGCATTGCTTATaGTGTCAGAAGTCCTCAGGAGGTGCCGCCCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LILPLKAIKHCL*CQKSSGGAAHS Trigger: TGAGTGGGCGGCACCTCCTGAGGACTTCTGACAGCATAAGCAATGCTTTATAGCTTTCAGGGGCAGAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | CCGCAGTGTGGGGATTCAGTAACCGCTGAAGACGGCTaGCTCGGAATCAGGAAGAATATCCAATCTTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: PQCGDSVTAEDG*LGIRKNIQSSM Trigger: CATTGAAGATTGGATATTCTTCCTGATTCCGAGCCAGCCGTCTTCAGCGGTTACTGAATCCCCACACTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGGACAACCTGGTCAACATGAGTTCCAGGATAGACAGAGATATGAAGAGTCACCTTTGGGCAGAAGGTTaGAACTCTGTGGTCCGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: EDNLVNMSSRIDRDMKSHLWAEG*NSVVRG Trigger: ACCACGGACCACAGAGTTCAAACCTTCTGCCCAAAG...GTGACTCTTCATATCTCTGTCTATCCTGGAACTCATGTTGACCAGGTTGTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR GCA 72 bp | CACTCTGAAAAGACTTCCCAAAACTGTACGGATGGTTaGCAGGAAACCACCAAAGTGACTGTGCCATGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HSEKTSQNCTDG*QETTKVTVPWD Trigger: ATCCCATGGCACAGTCACTTTGGTGGTTTCCTGGCAACCATCCGTACAGTTTTGGGAAGTCTTTTCAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | GATGGTTGCCAGGAAACCACCAAAGTGACTGTGCCATaGGATTTTGTGTGTGAGCAACTTGTACGGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: DGCQETTKVTVP*DFVCEQLVRLI Trigger: AATGAGCCGTACAAGTTGCTCACACACAAAATCCCATGGCACAGTCACTTTGGTGGTTTCCTGGCAACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGAAGTATCCTCAAGAGAAAACAGCTTTCTCCCATTGGCACAACACGGAATCACATAGGCTCACCCTaGCACACAAGCACAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: IRSILKRKQLSPIGTTRNHIGSP*HTSTAG Trigger: ACCTGCTGTGCTTGTGTGCAAGGGTGAGCCTATGTG...ATTCCGTGTTGTGCCAATGGGAGAAAGCTGTTTTCTCTTGAGGATACTTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | AAAACTGTACGGATGGTTGCCAGGAAACCACCAAAGTaGCTGTGCCATGGGATTTTGTGTGTGAGCAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KTVRMVARKPPK*LCHGILCVSNL Trigger: CAAGTTGCTCACACACAAAATCCCATGGCACAGTCACTTTGGTGGTTTCCTGGCAACCATCCGTACAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | GTCGCACAAGGCCGAAGCAGACATCCAAATACAACGTaGAATGGCTGTAGAGACAGTAGTTTTCTTGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VAQGRSRHPNTT*NGCRDSSFLGS Trigger: TGACCCAAGAAAACTACTGTCTCTACAGCCATTTCACGTTGTATTTGGATGTCTGCTTCGGCCTTGTGCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | ATTTTGTGTGTGAGCAACTTGTACGGCTCATTTCTTTaGGCAGAAGGTTTGAACTCTGTGGTCCGTGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: ILCVSNLYGSFL*AEGLNSVVRGT Trigger: GGTACCACGGACCACAGAGTTCAAACCTTCTGCCCAAAGAAATGAGCCGTACAAGTTGCTCACACACAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGGACAACCTGGTCAACATGAGTTCCAGGATAGACAGAGATATGAAGAGTCACGTCTTCCTAAGTGTTTaGGCTAACTCATGGTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EDNLVNMSSRIDRDMKSHVFLSV*ANSWSR Trigger: TCTTGACCATGAGTTAGCCAAAACACTTAGGAAGAC...GTGACTCTTCATATCTCTGTCTATCCTGGAACTCATGTTGACCAGGTTGTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | GACAACACAGAACACTATTGTTTGGGAACAAAGAACTaGCAGAAACAGCCACTATTCATCCCCAGCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: DNTEHYCLGTKN*QKQPLFIPSSG Trigger: ACCACTGCTGGGGATGAATAGTGGCTGTTTCTGTCAGTTCTTTGTTCCCAAACAATAGTGTTCTGTGTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR TCA 72 bp | ACACAATTTAAAAACAGCTTTTTCTCCTGTGACTCCTaGCATGCAGACCCAAGACACGAAGGCACAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TQFKNSFFSCDS*HADPRHEGTVQ Trigger: TTGGACTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGTTTTTAAATTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | ACACACACAAGCCTTTACAGACTTATCAAGGGGCTATaGTTCTGTGACAACACAGAACACTATTGTTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: THTSLYRLIKGL*FCDNTEHYCLG Trigger: TCCCAAACAATAGTGTTCTGTGTTGTCACAGAACCATAGCCCCTTGATAAGTCTGTAAAGGCTTGTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR GCA 72 bp | GGTGGCCATGATCAGTCCAACATTGGAATGGAGAACTaGTACAAAGTAATGCCCTTTCCTAAAAATGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: GGHDQSNIGMEN*YKVMPFPKNAY Trigger: ATATGCATTTTTAGGAAAGGGCATTACTTTGTAGCAGTTCTCCATTCCAATGTTGGACTGATCATGGCCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | GGCTATGGTTCTGTGACAACACAGAACACTATTGTTTaGGAACAAAGAACTGACAGAAACAGCCACTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GYGSVTTQNTIV*EQRTDRNSHYS Trigger: TGAATAGTGGCTGTTTCTGTCAGTTCTTTGTTCCCAAACAATAGTGTTCTGTGTTGTCACAGAACCATAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR-3UTR CAA 90 bp | AATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGCAAGCAATGTTACCCATGATCAGTCCAACATaGGAATGGAGAACTGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: NSSLSVLIKSNPRQAMLPMISPT*EWRTAT Trigger: TGTAGCAGTTCTCCATTCCAATGTTGGACTGATCAT...GGGTAACATTGCTTGCCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAAACAGCACCAGAAATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGAATAAACAAACCAGCTaGGAACACACTGCTAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TNSTRNSSLSVLIKSNPRNKQTS*EHTASK Trigger: CTTGCTAGCAGTGTGTTCCAAGCTGGTTTGTTTATT...CCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATTTCTGGTGCTGTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CCA 72 bp | ATGTTCGGGCATTCAGAACATTCATTGTACCTCCAATaGCTAGATGTGGGTATTGCATGTTTCAACAATACT | + |
|
Preference number: 3 (lower is better) Translates to: MFGHSEHSLYLQ*LDVGIACFNNT Trigger: AGTATTGTTGAAACATGCAATACCCACATCTAGCCATTGGAGGTACAATGAATGTTCTGAATGCCCGAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCCTCATTCTTCAGAGGACAGTaGTGGCGGGCATACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPGPVLCSNPMRKLPSSFFRGQ*WRAYHS Trigger: AGAGTGGTATGCCCGCCAGCACTGTCCTCTGAAGAA...TGAGGATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| 3UTR CAA 72 bp | CCCCTGCATCAGCCACCTCCCTACTGGCTCTCAACCTaGGTGTTCTCAGGGAAGGAGAGAATCTCTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLHQPPPYWLST*VFSGKERISTN Trigger: GTTGGTAGAGATTCTCTCCTTCCCTGAGAACACCAAGGTTGAGAGCCAGTAGGGAGGTGGCTGATGCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGACTCCTCCGCCTCTGCTaGCAACAGCCTCTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGLLRLC*QQPLLG Trigger: GCCAAGAAGAGGCTGTTGGCAGCAGAGGCGGAGGAG...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | CAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAACAGCGAGGGCATACTCGTaGACCACAGCCGACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QKSAIISTVSLLSPPKGTARAYS*TTADRA Trigger: CGCCCTGTCGGCTGTGGTGCACGAGTATGCCCTCGC...TGTTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | ATGGGCTTTTATGTAATGTCTTGTCTGACAGAGGGCCTAGCGCTCCATTGCCGAATGGGTGAGAACTCTTaGTGTAACCGTGGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: MGFYVMSCLTEGLALHCRMGENS*CNRGPI Trigger: GATGGGCCCACGGTTACAGCAAGAGTTCTCACCCAT...TCGGCAATGGAGCGCTAGGCCCTCTGTCAGACAAGACATTACATAAAAGCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | TGGACCACCACTACTAGGCTAAATTCCATCTTTTTAGGTTATACAGACCAAGTGGCGAGGGCATACTCGTaGACCACAGCCGACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WTTTTRLNSIFLGYTDQVARAYS*TTADRA Trigger: CGCCCTGTCGGCTGTGGTGCACGAGTATGCCCTCGC...CACTTGGTCTGTATAACCTAAAAAGATGGAATTTAGCCTAGTAGTGGTGGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCCTCAAATCTTCCCTTGTTCTaGAGGTGCTCTCAGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPGPVLCSNPMRKLPSSNLPLF*RCSQIF Trigger: AAAGATCTGAGAGCACCTCCAGAACAAGGGAAGATT...TGAGGATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCTGAAAGCTATAAAGCATTGCTTATGCTGTCAGAAGTCCTCAGGAGGTCATAGGCCAGGAGATTaGACTCAAGTACCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLKAIKHCLCCQKSSGGHRPGD*TQVPAF Trigger: GAAGGCTGGTACTTGAGTTCAATCTCCTGGCCTATG...ACCTCCTGAGGACTTCTGACAGCATAAGCAATGCTTTATAGCTTTCAGGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAAGTACAGGTACTGGTTaGCTGTGGGTAGTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGSTGTG*LWVVDL Trigger: AAGATCCACTACCCACAGTCAACCAGTACCTGTACT...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAGAGAAGCCCAAACCATaGTGTTCCAGATTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGEKPKP*CSRLAF Trigger: AAAGGCCAATCTGGAACATCATGGTTTGGGCTTCTC...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR CAA 72 bp | AGCAACTTGTACGGCTCATTTCTTTGGGCAGAAGGTTaGAACTCTGTGGTCCGTGGTACCTTTCTGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNLYGSFLWAEG*NSVVRGTFLMH Trigger: GTGCATCAGAAAGGTACCACGGACCACAGAGTTCAAACCTTCTGCCCAAAGAAATGAGCCGTACAAGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAGTGGGATATTCTCTCTaGCAAATGAGTGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGVGYSL*QMSEPS Trigger: TGAAGGCTCACTCATTTGTCAGAGAGAATATCCCAC...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | ATAAGAAGTATCCTCAAGAGAAAACAGCTTTCTCCCATTGGCACAACACGGAATCAGCTCCTCCGCCTCTaGTGCCAACAGCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRSILKRKQLSPIGTTRNQLLRL*CQQPLL Trigger: AAGAAGAGGCTGTTGGCAGCAGAGGCGGAGGAGCTG...ATTCCGTGTTGTGCCAATGGGAGAAAGCTGTTTTCTCTTGAGGATACTTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | CAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAACATTCTTCAGAGGACAGTaGTGGCGGGCATACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKSAIISTVSLLSPPKGTFFRGQ*WRAYHS Trigger: AGAGTGGTATGCCCGCCAGCACTGTCCTCTGAAGAA...TGTTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAATGCGGACTTTTCAATaGGGTTGGTCACAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGMRTFQ*GWSQSH Trigger: ATGACTTTGTGACCAACCTCATTGAAAAGTCCGCAT...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | CAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAACACATAGGCCAGGAGATTaGACTCAAGTACCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKSAIISTVSLLSPPKGTHRPGD*TQVPAF Trigger: GAAGGCTGGTACTTGAGTTCAATCTCCTGGCCTATG...TGTTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGACTCCTCCGCCTCTGCTaGCAACAGCCTCTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRIATKETSRMHNKIIFGLLRLC*QQPLLG Trigger: GCCAAGAAGAGGCTGTTGGCAGCAGAGGCGGAGGAG...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACGGAGAAGGTTGTGAGTaGACACCCACCATTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSTMDSLVYNKESHYALDGEGCE*TPTIVQ Trigger: CTGGACAATGGTGGGTGTGCACTCACAACCTTCTCC...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAACAAAGTCATCGAAGTaGCACCCAACTTCCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGTKSSK*HPTSFI Trigger: TATGAAGGAAGTTGGGTGCCACTTCGATGACTTTGT...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGACAGTATCAAGACACCTaGCAAGATGGAGTTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGQYQDT*QDGVKH Trigger: GTGTTTAACTCCATCTTGCCAGGTGTCTTGATACTG...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR CAA 72 bp | GATTTTGTGTGTGAGCAACTTGTACGGCTCATTTCTTaGGGCAGAAGGTTTGAACTCTGTGGTCCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DFVCEQLVRLIS*GRRFELCGPWY Trigger: GTACCACGGACCACAGAGTTCAAACCTTCTGCCCAAAGAAATGAGCCGTACAAGTTGCTCACACACAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGATCTCTGACAAATGAGTaGGCCTTCATTATCAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGSLTNE*AFIIKR Trigger: TCGTTTGATAATGAAGGCTCACTCATTTGTCAGAGA...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAAGAGAAGCCCAAACCATaGTGTTCCAGATTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKNLPLSQLSVSFLPQREEKPKP*CSRLAF Trigger: AAAGGCCAATCTGGAACATCATGGTTTGGGCTTCTC...TTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGACAGCTCCTCCGCCTCTaGTGCCAACAGCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRIATKETSRMHNKIIFGQLLRL*CQQPLL Trigger: AAGAAGAGGCTGTTGGCAGCAGAGGCGGAGGAGCTG...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR CAA 72 bp | TACATAACAACAGCAGCAATTCTCTCCAGAAGCGGGTaGCCTTCCCCGAATGTTAAGGCAGATAAACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YITTAAILSRSG*PSPNVKADKPE Trigger: TTCAGGTTTATCTGCCTTAACATTCGGGGAAGGCAACCCGCTTCTGGAGAGAATTGCTGCTGTTGTTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACAAACAGCACCAGAAATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGCCATTCCAAAGAACATaGAGAGCACGAAGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TNSTRNSSLSVLIKSNPRPFQRT*RARRAP Trigger: CGGTGCTCTTCGTGCTCTTCATGTTCTTTGGAATGG...CCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATTTCTGGTGCTGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACGTGGGATATTCTCTCTaGCAAATGAGTGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTMDSLVYNKESHYALDVGYSL*QMSEPS Trigger: TGAAGGCTCACTCATTTGTCAGAGAGAATATCCCAC...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAAGATCTTTGGCTCTGTaGTTCTTTTTCATTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEQMFQKPASGALGAILGRSLAL*FFFISS Trigger: TGAAGAAATGAAAAAGAACCACAGAGCCAAAGATCT...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | TGCAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAAGTGCTCTCAGATCTTTaGCTCTGTGGTTCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKNLPLSQLSVSFLPQREVLSDL*LCGSFS Trigger: TGAAAAAGAACCACAGAGCCAAAGATCTGAGAGCAC...TTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | TGCAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAATGCTTGATTTCTCCTTaGCTGCATTTAGTACTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKNLPLSQLSVSFLPQRECLISP*LHLVLV Trigger: CACGAGTACTAAATGCAGCCAAGGAGAAATCAAGCA...TTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | CAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAACATGTTTCATGGTAATGTaGCCATTTCTGTATGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKSAIISTVSLLSPPKGTCFMVM*PFLYVS Trigger: GGACACATACAGAAATGGTCACATTACCATGAAACA...TGTTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACCCATTCCAAAGAACATaGAGAGCACGAAGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KINTSTMDSLVYNKESHYPFQRT*RARRAP Trigger: CGGTGCTCTTCGTGCTCTTCATGTTCTTTGGAATGG...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACAATAAAAGCACAGAATaGGTCCATAGCCCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TSTMDSLVYNKESHYALDNKSTE*VHSPGT Trigger: TGTTCCTGGGCTATGGACTCATTCTGTGCTTTTATT...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | AGATACAGAAATGATGTCTTCCTAAGTGTTTTGGCTAACTCATGGTCAAGATATATGGGTGAGAACTCTTaGTGTAACCGTGGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RYRNDVFLSVLANSWSRYMGENS*CNRGPI Trigger: GATGGGCCCACGGTTACAGCAAGAGTTCTCACCCAT...ATATCTTGACCATGAGTTAGCCAAAACACTTAGGAAGACATCATTTCTGTATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | TGGACCACCACTACTAGGCTAAATTCCATCTTTTTAGGTTATACAGACCAAGTGATGCGGACTTTTCAATaGGGTTGGTCACAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WTTTTRLNSIFLGYTDQVMRTFQ*GWSQSH Trigger: ATGACTTTGTGACCAACCTCATTGAAAAGTCCGCAT...CACTTGGTCTGTATAACCTAAAAAGATGGAATTTAGCCTAGTAGTGGTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | CAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAACAATTCTCTCTGACAAATaGGTGAGCCTTCATTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSAIISTVSLLSPPKGTILSDK*VSLHYQ Trigger: TTGATAATGAAGGCTCACTCATTTGTCAGAGAGAAT...TGTTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAAGTACAGGTACTGGTTaGCTGTGGGTAGTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRIATKETSRMHNKIIFGSTGTG*LWVVDL Trigger: AAGATCCACTACCCACAGTCAACCAGTACCTGTACT...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | TGGACCACCACTACTAGGCTAAATTCCATCTTTTTAGGTTATACAGACCAAGTGGTGCTCTCAGATCTTTaGCTCTGTGGTTCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WTTTTRLNSIFLGYTDQVVLSDL*LCGSFS Trigger: TGAAAAAGAACCACAGAGCCAAAGATCTGAGAGCAC...CACTTGGTCTGTATAACCTAAAAAGATGGAATTTAGCCTAGTAGTGGTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACAAGGGAATAGATCAATaGGTGAGAACTCTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSTMDSLVYNKESHYALDKGIDQ*VRTLAV Trigger: TACAGCAAGAGTTCTCACCCATTGATCTATTCCCTT...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | TGGACCACCACTACTAGGCTAAATTCCATCTTTTTAGGTTATACAGACCAAGTGTGCTTGATTTCTCCTTaGCTGCATTTAGTACTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: WTTTTRLNSIFLGYTDQVCLISP*LHLVLV Trigger: CACGAGTACTAAATGCAGCCAAGGAGAAATCAAGCA...CACTTGGTCTGTATAACCTAAAAAGATGGAATTTAGCCTAGTAGTGGTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGATGGGTAGTGGATCTTTaGTTGATTTCTCCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRIATKETSRMHNKIIFGWVVDL*LISPWL Trigger: CAGCCAAGGAGAAATCAAGCAAAGATCCACTACCCA...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGCACCAGAAATTCCAGTCTTAGTGTTCTAATAAAGTCTAACCCGAGGAAGGGAATAGATCAATaGGTGAGAACTCTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TNSTRNSSLSVLIKSNPRKGIDQ*VRTLAV Trigger: TACAGCAAGAGTTCTCACCCATTGATCTATTCCCTT...CCTCGGGTTAGACTTTATTAGAACACTAAGACTGGAATTTCTGGTGCTGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACAATAAAAGCACAGAATaGGTCCATAGCCCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KINTSTMDSLVYNKESHYNKSTE*VHSPGT Trigger: TGTTCCTGGGCTATGGACTCATTCTGTGCTTTTATT...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR GCA 90 bp | AGATACAGAAATGATGTCTTCCTAAGTGTTTTGGCTAACTCATGGTCAAGATATTGGGTAGTGGATCTTTaGTTGATTTCTCCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RYRNDVFLSVLANSWSRYWVVDL*LISPWL Trigger: CAGCCAAGGAGAAATCAAGCAAAGATCCACTACCCA...ATATCTTGACCATGAGTTAGCCAAAACACTTAGGAAGACATCATTTCTGTATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGACCAACAGCCTCTTCTTaGCTATCAATTGTTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRIATKETSRMHNKIIFGPTASS*LSIVSW Trigger: CCATGAAACAATTGATAGCCAAGAAGAGGCTGTTGG...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACCCAACAGCCTCTTCTTaGCTATCAATTGTTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KINTSTMDSLVYNKESHYPTASS*LSIVSW Trigger: CCATGAAACAATTGATAGCCAAGAAGAGGCTGTTGG...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAACAAAGTCATCGAAGTaGCACCCAACTTCCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SRIATKETSRMHNKIIFGTKSSK*HPTSFI Trigger: TATGAAGGAAGTTGGGTGCCACTTCGATGACTTTGT...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACAATCTTCCCTTGTTCTaGAGGTGCTCTCAGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KINTSTMDSLVYNKESHYNLPLF*RCSQIF Trigger: AAAGATCTGAGAGCACCTCCAGAACAAGGGAAGATT...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACTGTTTCATGGTAATGTaGCCATTTCTGTATGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KINTSTMDSLVYNKESHYCFMVM*PFLYVS Trigger: GGACACATACAGAAATGGTCACATTACCATGAAACA...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACTGTGGTAAATTGTTCTaGTGTGGTCCACTTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KINTSTMDSLVYNKESHYCGKLF*CGPLQT Trigger: TGTTTGAAGTGGACCACATCAGAACAATTTACCACA...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | ATAAACAATAAACAAACCAGCTTGGAACACACTGCTAGCAAGAGGTTTGGTTTTTCTCTGACAAATGAGTaGGCCTTCATTATCAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: INNKQTSLEHTASKRFGFSLTNE*AFIIKR Trigger: TCGTTTGATAATGAAGGCTCACTCATTTGTCAGAGA...AAAACCAAACCTCTTGCTAGCAGTGTGTTCCAAGCTGGTTTGTTTATTGTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR CCA 90 bp | AGATACAGAAATGATGTCTTCCTAAGTGTTTTGGCTAACTCATGGTCAAGATATCAGTATCAAGACACCTaGCAAGATGGAGTTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RYRNDVFLSVLANSWSRYQYQDT*QDGVKH Trigger: GTGTTTAACTCCATCTTGCCAGGTGTCTTGATACTG...ATATCTTGACCATGAGTTAGCCAAAACACTTAGGAAGACATCATTTCTGTATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| 3UTR CAA 72 bp | GCACAACACGGAATAATAAACAATAAACAAACCAGCTaGGAACACACTGCTAGCAAGAGGTTTGGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: AQHGIINNKQTS*EHTASKRFGFI Trigger: AATAAAACCAAACCTCTTGCTAGCAGTGTGTTCCAAGCTGGTTTGTTTATTGTTTATTATTCCGTGTTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR TCA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAATTCTCTCTGACAAATaGGTGAGCCTTCATTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRIATKETSRMHNKIIFGILSDK*VSLHYQ Trigger: TTGATAATGAAGGCTCACTCATTTGTCAGAGAGAAT...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | GCTGTTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCCTGAAGGGCTCCTGTTaGATATTCCGGAATAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVSARPSALQQPYEEAPILKGSC*IFRNSG Trigger: CCCACTATTCCGGAATATCAAACAGGAGCCCTTCAG...GATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS TCA 90 bp | GCACCACAGCCGACAGGGCGAAGACGGCCAGCATGGCGGCAGATTTaGACCTCTTCGAGAAAAACCAGAGCAGGTCTTTGTAAACATAGT | + |
|
Preference number: 5 (lower is better) Translates to: APQPTGRRRPAWRQI*TSSRKTRAGLCKHS Trigger: ACTATGTTTACAAAGACCTGCTCTGGTTTTTCTCGAAGAGGTTCAAATCTGCCGCCATGCTGGCCGTCTTCGCCCTGTCGGCTGTGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | TTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCCTCAATCTCAGCAAAGGCATaGAGCCAGCAGTGCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLPGPVLCSNPMRKLPSSISAKA*SQQCKK Trigger: CTTTTTGCACTGCTGGCTCAATGCCTTTGCTGAGAT...TGAGGATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | GCTGTTTCTGCCAGGCCCAGTGCTCTGCAGCAACCCTATGAGGAAGCTCCCATCTTGCTTGATTTCTCCTaGGCTGCATTTAGTACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: AVSARPSALQQPYEEAPILLDFS*AAFSTR Trigger: ACGAGTACTAAATGCAGCCAAGGAGAAATCAAGCAA...GATGGGAGCTTCCTCATAGGGTTGCTGCAGAGCACTGGGCCTGGCAGAAACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS TCA 90 bp | CTTGCTGTAACCGTGGGCCCATCGCTGGAACAGGAAATAGGGGATTaGCAGTGTAGACAGGAACATGGCCCACCATGTCCAAATAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAVTVGPSLEQEIGD*QCRQEHGPPCPNNS Trigger: ACTGTTATTTGGACATGGTGGGCCATGTTCCTGTCTACACTGTCAATCCCCTATTTCCTGTTCCAGCGATGGGCCCACGGTTACAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS GCA 90 bp | AGAGCAAGCCATGGACAAGGGAATAGATCAATGGGTGAGAACTCTTaGTGTAACCGTGGGCCCATCGCTGGAACAGGAAATAGGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: RASHGQGNRSMGENS*CNRGPIAGTGNRGL Trigger: CAATCCCCTATTTCCTGTTCCAGCGATGGGCCCACGGTTACAGCAAGAGTTCTCACCCATTGATCTATTCCCTTGTCCATGGCTTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTTTTCTCCTGTGACTCCTGACATGCAGACCCAAGACACGAAGGCACAGTTTCTGGGCTTCATCTaGCTCAGGATTCTCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TAFSPVTPDMQTQDTKAQFLGFI*LRILPR Trigger: TCTGGGGAGAATCCTGAGCAAGATGAAGCCCAGAAA...CTGTGCCTTCGTGTCTTGGGTCTGCATGTCAGGAGTCACAGGAGAAAAAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS CCA 90 bp | AGCGATGCGGACTTTTCAATGAGGTTGGTCACAAAGTCATCGAAGTaGCACCCAACTTCCTTCATAAATAGTGGCTTCAGCTCCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SDADFSMRLVTKSSK*HPTSFINSGFSSSA Trigger: GGCGGAGGAGCTGAAGCCACTATTTATGAAGGAAGTTGGGTGCCACTTCGATGACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS GCA 90 bp | AAGAATGGAGAAGGTTGTGAGTGCACACCCACCATTGTCCAGCGATaGGGACTTTTCAATGAGGTTGGTCACAAAGTCATCGAAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KNGEGCECTPTIVQR*GLFNEVGHKVIEVA Trigger: TGCCACTTCGATGACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGGGTGTGCACTCACAACCTTCTCCATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAGCGGGCATACCACTCTaGAGAATAAAAGCACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TEQMFQKPASGALGAILGAGIPL*RIKAQN Trigger: ATTCTGTGCTTTTATTCTCAAGAGTGGTATGCCCGC...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCAGATGTTTCAGAAGCCAGCTTCTGGAGCCTTAGGAGCCATTTTGGGAGACTTTTCAATGAGGTaGGTCACAAAGTCATCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TEQMFQKPASGALGAILGDFSMR*VTKSSK Trigger: CTTCGATGACTTTGTGACCAACCTCATTGAAAAGTC...TCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | GAGGACAACCTGGTCAACATGAGTTCCAGGATAGACAGAGATATGAAGAGTCACGGTGCTCTCAGATCTTaGGCTCTGTGGTTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EDNLVNMSSRIDRDMKSHGALRS*ALWFFF Trigger: GAAAAAGAACCACAGAGCCAAAGATCTGAGAGCACC...GTGACTCTTCATATCTCTGTCTATCCTGGAACTCATGTTGACCAGGTTGTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS TCA 90 bp | ATGAGTGAGCCTTCATTATCAAACGAATCTGTTCCAGTATCAGAATaGACCGGGAGGCTGGTGGCAGTGTGTATGCTAAGACAACGTATG | + |
|
Preference number: 5 (lower is better) Translates to: MSEPSLSNESVPVSE*TGRLVAVCMLRQRM Trigger: CATACGTTGTCTTAGCATACACACTGCCACCAGCCTCCCGGTTCATTCTGATACTGGAACAGATTCGTTTGATAATGAAGGCTCACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS CCA 90 bp | TCCATAGCCCAGGAACAGAGAAGCCCAAACCATGATGTTCCAGATTaGCCTTTTCCGACTGTCGTTAACAATGAAGTTAAAAGCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIAQEQRSPNHDVPD*PFPTVVNNEVKSHS Trigger: GGAATGGCTTTTAACTTCATTGTTAACGACAGTCGGAAAAGGCCAATCTGGAACATCATGGTTTGGGCTTCTCTGTTCCTGGGCTATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACTTTCTGGGCTTCATCTaGCTCAGGATTCTCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSTMDSLVYNKESHYALDFLGFI*LRILPR Trigger: TCTGGGGAGAATCCTGAGCAAGATGAAGCCCAGAAA...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | CAAAAATCTGCCATTATCTCAACTGTCAGTCTCCTTTCTCCCCCAAAGGGAACAATCTCAGCAAAGGCATaGAGCCAGCAGTGCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKSAIISTVSLLSPPKGTISAKA*SQQCKK Trigger: CTTTTTGCACTGCTGGCTCAATGCCTTTGCTGAGAT...TGTTCCCTTTGGGGGAGAAAGGAGACTGACAGTTGAGATAATGGCAGATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCTGAAAGCTATAAAGCATTGCTTATGCTGTCAGAAGTCCTCAGGAGGTCTTCTTGGCTATCAATaGTTTCATGGTAATGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LPLKAIKHCLCCQKSSGGLLGYQ*FHGNVT Trigger: GGTCACATTACCATGAAACAATTGATAGCCAAGAAG...ACCTCCTGAGGACTTCTGACAGCATAAGCAATGCTTTATAGCTTTCAGGGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | ACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCATTAGACGCGGGCATACCACTCTaGAGAATAAAAGCACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TSTMDSLVYNKESHYALDAGIPL*RIKAQN Trigger: ATTCTGTGCTTTTATTCTCAAGAGTGGTATGCCCGC...GTCTAATGCGTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | TGGACCACCACTACTAGGCTAAATTCCATCTTTTTAGGTTATACAGACCAAGTGGTAGTGGATCTTTGCTaGATTTCTCCTTGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WTTTTRLNSIFLGYTDQVVVDLC*ISPWLH Trigger: ATGCAGCCAAGGAGAAATCAAGCAAAGATCCACTAC...CACTTGGTCTGTATAACCTAAAAAGATGGAATTTAGCCTAGTAGTGGTGGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGACTGAAGGGCTCCTGTTaGATATTCCGGAATAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRIATKETSRMHNKIIFGLKGSC*IFRNSG Trigger: CCCACTATTCCGGAATATCAAACAGGAGCCCTTCAG...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS TCA 90 bp | GCTGCCAACAGCCTCTTCTTGGCTATCAATTGTTTCATGGTAATGTaGCCATTTCTGTATGTGTCCATGAAATTTTTCTGGGCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: AANSLFLAINCFMVM*PFLYVSMKFFWASS Trigger: AGATGAAGCCCAGAAAAATTTCATGGACACATACAGAAATGGTCACATTACCATGAAACAATTGATAGCCAAGAAGAGGCTGTTGGCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS-3UTR CAA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAGGTGCTCTCAGATCTTaGGCTCTGTGGTTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRIATKETSRMHNKIIFGGALRS*ALWFFF Trigger: GAAAAAGAACCACAGAGCCAAAGATCTGAGAGCACC...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | ATAAGAAGTATCCTCAAGAGAAAACAGCTTTCTCCCATTGGCACAACACGGAATAATAAAAATCTTCCCTaGTTCTGGAGGTGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRSILKRKQLSPIGTTRNNKNLP*FWRCSQ Trigger: CTGAGAGCACCTCCAGAACAAGGGAAGATTTTTATT...ATTCCGTGTTGTGCCAATGGGAGAAAGCTGTTTTCTCTTGAGGATACTTCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAGTGGGTAGTGGATCTTaGCTTGATTTCTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRIATKETSRMHNKIIFGVGSGS*LDFSLA Trigger: AGCCAAGGAGAAATCAAGCAAAGATCCACTACCCAC...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGTGGGTAGTGGATCTTaGCTTGATTTCTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KINTSTMDSLVYNKESHYVGSGS*LDFSLA Trigger: AGCCAAGGAGAAATCAAGCAAAGATCCACTACCCAC...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACAGCATGGCGGCAGATTaGAACCTCTTCGAGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KINTSTMDSLVYNKESHYSMAAD*NLFEKN Trigger: GTTTTTCTCGAAGAGGTTCAAATCTGCCGCCATGCT...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS TCA 90 bp | TTGGCTGCATTTAGTACTCGTGGGATATTCTCTCTGACAAATGAGTaGGCCTTCATTATCAAACGAATCTGTTCCAGTATCAGAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAAFSTRGIFSLTNE*AFIIKRICSSIRMN Trigger: GTTCATTCTGATACTGGAACAGATTCGTTTGATAATGAAGGCTCACTCATTTGTCAGAGAGAATATCCCACGAGTACTAAATGCAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS TCA 90 bp | TTGATTTCTCCTTGGCTGCATTTAGTACTCGTGGGATATTCTCTCTaGCAAATGAGTGAGCCTTCATTATCAAACGAATCTGTTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LISPWLHLVLVGYSL*QMSEPSLSNESVPV Trigger: TACTGGAACAGATTCGTTTGATAATGAAGGCTCACTCATTTGTCAGAGAGAATATCCCACGAGTACTAAATGCAGCCAAGGAGAAATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACGCCAACAGCCTCTTCTaGGCTATCAATTGTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KINTSTMDSLVYNKESHYANSLF*AINCFM Trigger: CATGAAACAATTGATAGCCAAGAAGAGGCTGTTGGC...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAGTAGTGGATCTTTGCTaGATTTCTCCTTGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRIATKETSRMHNKIIFGVVDLC*ISPWLH Trigger: ATGCAGCCAAGGAGAAATCAAGCAAAGATCCACTAC...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AGATACAGAAATGATGTCTTCCTAAGTGTTTTGGCTAACTCATGGTCAAGATATAGCATGGCGGCAGATTaGAACCTCTTCGAGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RYRNDVFLSVLANSWSRYSMAAD*NLFEKN Trigger: GTTTTTCTCGAAGAGGTTCAAATCTGCCGCCATGCT...ATATCTTGACCATGAGTTAGCCAAAACACTTAGGAAGACATCATTTCTGTATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGAAATAAAAATCTTCCCTaGTTCTGGAGGTGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRIATKETSRMHNKIIFGNKNLP*FWRCSQ Trigger: CTGAGAGCACCTCCAGAACAAGGGAAGATTTTTATT...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AGCAGAATAGCAACAAAAGAGACGAGCAGAATGCATAACAAGATTATCTTTGGATTGCTTGATTTCTCCTaGGCTGCATTTAGTACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRIATKETSRMHNKIIFGLLDFS*AAFSTR Trigger: ACGAGTACTAAATGCAGCCAAGGAGAAATCAAGCAA...TCCAAAGATAATCTTGTTATGCATTCTGCTCGTCTCTTTTGTTGCTATTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS-3UTR CAA 90 bp | AAGATTAATACTTCCACTATGGACTCGCTAGTCTATAACAAGGAAAGTCACTACCTTCTTGGCTATCAATaGTTTCATGGTAATGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: KINTSTMDSLVYNKESHYLLGYQ*FHGNVT Trigger: GGTCACATTACCATGAAACAATTGATAGCCAAGAAG...GTAGTGACTTTCCTTGTTATAGACTAGCGAGTCCATAGTGGAAGTATTAATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS CCA 72 bp | GCACGAAGAGCACCGGGTAGAAGTAACTCAGGCAGATaGCGAGGGCATACTCGTGCACCACAGCCGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARRAPGRSNSGR*RGHTRAPQPTG Trigger: CCCTGTCGGCTGTGGTGCACGAGTATGCCCTCGCCATCTGCCTGAGTTACTTCTACCCGGTGCTCTTCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS CAA 72 bp | GCCGACAGGGCGAAGACGGCCAGCATGGCGGCAGATTaGAACCTCTTCGAGAAAAACCAGAGCAGGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ADRAKTASMAAD*NLFEKNQSRSL Trigger: CAAAGACCTGCTCTGGTTTTTCTCGAAGAGGTTCAAATCTGCCGCCATGCTGGCCGTCTTCGCCCTGTCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS TCA 72 bp | ACCGTGGGCCCATCGCTGGAACAGGAAATAGGGGATTaGCAGTGTAGACAGGAACATGGCCCACCATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVGPSLEQEIGD*QCRQEHGPPCP Trigger: TGGACATGGTGGGCCATGTTCCTGTCTACACTGTCAATCCCCTATTTCCTGTTCCAGCGATGGGCCCACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS TCA 72 bp | CACACCCACCATTGTCCAGCGATGCGGACTTTTCAATaGGGTTGGTCACAAAGTCATCGAAGTGGCACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: HTHHCPAMRTFQ*GWSQSHRSGTQ Trigger: TTGGGTGCCACTTCGATGACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS CAA 72 bp | CCACCATTGTCCAGCGATGCGGACTTTTCAATGAGGTaGGTCACAAAGTCATCGAAGTGGCACCCAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLSSDADFSMR*VTKSSKWHPTS Trigger: GGAAGTTGGGTGCCACTTCGATGACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS TCA 72 bp | GGCGGGCATACCACTCTTGAGAATAAAAGCACAGAATaGGTCCATAGCCCAGGAACAGAGAAGCCCAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: GGHTTLENKSTE*VHSPGTEKPKP Trigger: TGGTTTGGGCTTCTCTGTTCCTGGGCTATGGACTCATTCTGTGCTTTTATTCTCAAGAGTGGTATGCCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
||
| CDS GCA 72 bp | GAAGGTTGTGAGTGCACACCCACCATTGTCCAGCGATaGGGACTTTTCAATGAGGTTGGTCACAAAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: EGCECTPTIVQR*GLFNEVGHKVI Trigger: GATGACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGGGTGTGCACTCACAACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS GCA 72 bp | CATGGACAAGGGAATAGATCAATGGGTGAGAACTCTTaGTGTAACCGTGGGCCCATCGCTGGAACAGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: HGQGNRSMGENS*CNRGPIAGTGN Trigger: ATTTCCTGTTCCAGCGATGGGCCCACGGTTACAGCAAGAGTTCTCACCCATTGATCTATTCCCTTGTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS CAA 72 bp | TCAAGAATGGAGAAGGTTGTGAGTGCACACCCACCATaGTCCAGCGATGCGGACTTTTCAATGAGGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SRMEKVVSAHPP*SSDADFSMRLV Trigger: GACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGGGTGTGCACTCACAACCTTCTCCATTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS CAA 90 bp | AGTGCACACCCACCATTGTCCAGCGATGCGGACTTTTCAATGAGGTaGGTCACAAAGTCATCGAAGTGGCACCCAACTTCCTTCATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SAHPPLSSDADFSMR*VTKSSKWHPTSFIN Trigger: ATTTATGAAGGAAGTTGGGTGCCACTTCGATGACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGGGTGTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS CAA 90 bp | TTCATTTCTTCAAGAATGGAGAAGGTTGTGAGTGCACACCCACCATaGTCCAGCGATGCGGACTTTTCAATGAGGTTGGTCACAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FISSRMEKVVSAHPP*SSDADFSMRLVTKS Trigger: TGACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGGGTGTGCACTCACAACCTTCTCCATTCTTGAAGAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
||
| CDS TCA 72 bp | CCTTCATTATCAAACGAATCTGTTCCAGTATCAGAATaGACCGGGAGGCTGGTGGCAGTGTGTATGCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: PSLSNESVPVSE*TGRLVAVCMLR Trigger: TCTTAGCATACACACTGCCACCAGCCTCCCGGTTCATTCTGATACTGGAACAGATTCGTTTGATAATGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS CCA 72 bp | CATAGCGACATAACCCCATCTTACAGTAGGAGTCCTTaGGTAGTTGTCTCGGTAAATAAGTGTAGGCGCAAA | + |
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Preference number: 6 (lower is better) Translates to: HSDITPSYSRSP*VVVSVNKCRRK Trigger: TTTGCGCCTACACTTATTTACCGAGACAACTACCCAAGGACTCCTACTGTAAGATGGGGTTATGTCGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS CAA 72 bp | CGCCTCTGCTGCCAACAGCCTCTTCTTGGCTATCAATaGTTTCATGGTAATGTGACCATTTCTGTATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RLCCQQPLLGYQ*FHGNVTISVCV Trigger: GACACATACAGAAATGGTCACATTACCATGAAACAATTGATAGCCAAGAAGAGGCTGTTGGCAGCAGAGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS CAA 90 bp | AGGTACTGGTTGACTGTGGGTAGTGGATCTTTGCTTGATTTCTCCTaGGCTGCATTTAGTACTCGTGGGATATTCTCTCTGACAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: RYWLTVGSGSLLDFS*AAFSTRGIFSLTNE Trigger: CTCATTTGTCAGAGAGAATATCCCACGAGTACTAAATGCAGCCAAGGAGAAATCAAGCAAAGATCCACTACCCACAGTCAACCAGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS CCA 72 bp | GACTTTTCAATGAGGTTGGTCACAAAGTCATCGAAGTaGCACCCAACTTCCTTCATAAATAGTGGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: DFSMRLVTKSSK*HPTSFINSGFS Trigger: GCTGAAGCCACTATTTATGAAGGAAGTTGGGTGCCACTTCGATGACTTTGTGACCAACCTCATTGAAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
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| CDS CAA 72 bp | TTGACTGTGGGTAGTGGATCTTTGCTTGATTTCTCCTaGGCTGCATTTAGTACTCGTGGGATATTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LTVGSGSLLDFS*AAFSTRGIFSL Trigger: CAGAGAGAATATCCCACGAGTACTAAATGCAGCCAAGGAGAAATCAAGCAAAGATCCACTACCCACAGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS GCA 72 bp | ATGTGGTCCACTTCAAACAGCTCGTCTAAAAGAGACTaGCTTGAAATAAAAATCTTCCCTTGTTCTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: MWSTSNSSSKRD*LEIKIFPCSGG Trigger: ACCTCCAGAACAAGGGAAGATTTTTATTTCAAGGCAGTCTCTTTTAGACGAGCTGTTTGAAGTGGACCACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051396.13 ENSMUST00000187507.7 ENSMUST00000189661.7 |
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| CDS TCA 72 bp | TTTAGTACTCGTGGGATATTCTCTCTGACAAATGAGTaGGCCTTCATTATCAAACGAATCTGTTCCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: FSTRGIFSLTNE*AFIIKRICSSI Trigger: GATACTGGAACAGATTCGTTTGATAATGAAGGCTCACTCATTTGTCAGAGAGAATATCCCACGAGTACTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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| CDS TCA 72 bp | AGCCTCTTCTTGGCTATCAATTGTTTCATGGTAATGTaGCCATTTCTGTATGTGTCCATGAAATTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLFLAINCFMVM*PFLYVSMKFFW Trigger: CCAGAAAAATTTCATGGACACATACAGAAATGGTCACATTACCATGAAACAATTGATAGCCAAGAAGAGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051396.13 ENSMUST00000189661.7 |
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