Pregenerated sensors for SNX8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029560Ensembl transcript IDs: ENSMUST00000031539.12, ENSMUST00000196130.5, ENSMUST00000196566.5, ENSMUST00000197880.5, ENSMUST00000198945.5
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTCCGCCAGCAGTGCAAACTCCACGGAGAGGCCCTTGAGCGCTTaGTTCAGGGAGCCCCATGTGCTGAGGTGCAGAGCAGCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LSASSANSTERPLSA*FREPHVLRCRAAQE Trigger: CTCCTGGGCTGCTCTGCACCTCAGCACATGGGGCTCCCTGAAGCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR TCA 90 bp | CACACGCCATCCTCCTGCGGGGAGCGCGGTGGCGTCAACACACTGTaGGGTCCAGCGAAGAGGCAGCTCAGCTTCGGCTTCAGGTCATTC | + |
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Preference number: 1 (lower is better) Translates to: HTPSSCGERGGVNTL*GPAKRQLSFGFRSF Trigger: GAATGACCTGAAGCCGAAGCTGAGCTGCCTCTTCGCTGGACCTCACAGTGTGTTGACGCCACCGCGCTCCCCGCAGGAGGATGGCGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR GCA 90 bp | GCCCCACTCAGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTaGCTCTTGTGCTTCTCTGTCTTTCTGGCAGCCCCAAGCGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: APLRPGKGTSRREIR*LLCFSVFLAAPSVA Trigger: AGCCACGCTTGGGGCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCTGAGTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR CCA 90 bp | TTGCCACTAGTGGGGACACACGCCATCCTCCTGCGGGGAGCGCGGTaGCGTCAACACACTGTGAGGTCCAGCGAAGAGGCAGCTCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: LPLVGTHAILLRGAR*RQHTVRSSEEAAQL Trigger: AAGCTGAGCTGCCTCTTCGCTGGACCTCACAGTGTGTTGACGCCACCGCGCTCCCCGCAGGAGGATGGCGTGTGTCCCCACTAGTGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR GCA 90 bp | AGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCTTGTaGTTCTCTGTCTTTCTGGCAGCCCCAAGCGTGGCTGGGGCACAA | + |
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Preference number: 1 (lower is better) Translates to: RPGKGTSRREIRCLL*FSVFLAAPSVAGAQ Trigger: TTGTGCCCCAGCCACGCTTGGGGCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR GCA 90 bp | AAGGAGAGGAAGAGTTTAAGGAGCACGTCCTCAGAGAAGGGTGGGTaGCGGGCCACCAGGTTGATGAAGCGCTTCAGGGCCCTCCGGCGG | + |
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Preference number: 1 (lower is better) Translates to: KERKSLRSTSSEKGG*RATRLMKRFRALRR Trigger: CCGCCGGAGGGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGACGTGCTCCTTAAACTCTTCCTCTCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR GCA 90 bp | ATTCTCCTCCTTCTTGCCCTGCTGTGCAGCTCTGTCCGCCAGCAGTaGAAACTCCACGGAGAGGCCCTTGAGCGCTTGCTTCAGGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: ILLLLALLCSSVRQQ*KLHGEALERLLQGA Trigger: GGCTCCCTGAAGCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR CCA 90 bp | TCCGGTGCCTCTTGTGCTTCTCTGTCTTTCTGGCAGCCCCAAGCGTaGCTGGGGCACAACACAGGCTCAGACAGCACGATACCCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SGASCASLSFWQPQA*LGHNTGSDSTIPRR Trigger: CCTTCTGGGTATCGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTGGGGCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR CCA 90 bp | ACTGAAGGAGAGGAAGAGTTTAAGGAGCACGTCCTCAGAGAAGGGTaGGTGCCGGGCCACCAGGTTGATGAAGCGCTTCAGGGCCCTCCG | + |
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Preference number: 1 (lower is better) Translates to: TEGEEEFKEHVLREG*VPGHQVDEALQGPP Trigger: CGGAGGGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGACGTGCTCCTTAAACTCTTCCTCTCCTTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR GCA 90 bp | CGCTGCACTCATCATCTGCCTCTTCATCAGGCCGTACTTGTGCAGTaGCCGCTGGTGTTTGTGAAGCACGCCCTTCTCGTGCCGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: RCTHHLPLHQAVLVQ*PLVFVKHALLVPLT Trigger: TGTGAGCGGCACGAGAAGGGCGTGCTTCACAAACACCAGCGGGCACTGCACAAGTACGGCCTGATGAAGAGGCAGATGATGAGTGCAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR GCA 90 bp | TGCTCCACAGACTCAGGTTCTCGGCCGTGCGCTGCACTCATCATCTaGCTCTTCATCAGGCCGTACTTGTGCAGTGCCCGCTGGTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: CSTDSGSRPCAALII*LFIRPYLCSARWCL Trigger: CAAACACCAGCGGGCACTGCACAAGTACGGCCTGATGAAGAGGCAGATGATGAGTGCAGCGCACGGCCGAGAACCTGAGTCTGTGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR TCA 90 bp | ATGTCTGTAGGCCCAAGGCTAGAGTCACTGCCCACTCTGAGAGATTaGCCAGCTCTTTGCCAGGCCACAGGACAGGCCAGTCCTCCCATC | + |
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Preference number: 1 (lower is better) Translates to: MSVGPRLESLPTLRD*PALCQATGQASPPI Trigger: GATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCTAGCCTTGGGCCTACAGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR TCA 90 bp | AAGTTTGGAGTCAGGCACCCACAGTCCAGTCAGGGAAAGACTATGTaGGAAAAGGCAGGCTCTATTGCAGGCGTGGGGGACCCAGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: KFGVRHPQSSQGKTM*EKAGSIAGVGDPEH Trigger: GTGCTCTGGGTCCCCCACGCCTGCAATAGAGCCTGCCTTTTCTCACATAGTCTTTCCCTGACTGGACTGTGGGTGCCTGACTCCAAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR TCA 90 bp | ATGAACTCATCTCCCACGCACTGGGCCGCCTCCTTGAGCTTGTGCTaGACATCCGAGCCACTGAAGGAGAGGAAGAGTTTAAGGAGCACG | + |
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Preference number: 1 (lower is better) Translates to: MNSSPTHWAASLSLC*TSEPLKERKSLRST Trigger: CGTGCTCCTTAAACTCTTCCTCTCCTTCAGTGGCTCGGATGTTCAGCACAAGCTCAAGGAGGCGGCCCAGTGCGTGGGAGATGAGTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR CCA 90 bp | GCTTGTAGAAGCTGTTGTAGACATTTCGAATCAGCTCCCGGCTCATaGCAAATTGAGTCTGGATGTCAGCTGGGAGGAAGTCCTTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: ACRSCCRHFESAPGS*QIESGCQLGGSPWP Trigger: GGGCCAAGGACTTCCTCCCAGCTGACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGATTCGAAATGTCTACAACAGCTTCTACAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCCCACTCAGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCGCCCGCTGGTGTTTGTaGAGCACGCCCTTCTCGTGC | + |
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Preference number: 2 (lower is better) Translates to: WAPLRPGKGTSRREIRCLARWCL*STPFSC Trigger: GCACGAGAAGGGCGTGCTTCACAAACACCAGCGGGC...GAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCTGAGTGGGGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | CTCAGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCTaGTGCTTCTCTGTCTTTCTGGCAGCCCCAAGCGTGGCTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LRPGKGTSRREIRCL*CFSVFLAAPSVAGA Trigger: TGCCCCAGCCACGCTTGGGGCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | TCTGTCCGCCAGCAGTGCAAACTCCACGGAGAGGCCCTTGAGCGCTaGCTTCAGGGAGCCCCATGTGCTGAGGTGCAGAGCAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SVRQQCKLHGEALER*LQGAPCAEVQSSPG Trigger: TCCTGGGCTGCTCTGCACCTCAGCACATGGGGCTCCCTGAAGCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTCCTCCCACTCTGAGAGATTaGCCAGCTCTTTGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AWAPNRDAHLQCFPTTPPPTLRD*PALCQA Trigger: GGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGG...AGGAGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | TGTGCAGCTCTGTCCGCCAGCAGTGCAAACTCCACGGAGAGGCCCTaGAGCGCTTGCTTCAGGGAGCCCCATGTGCTGAGGTGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: CAALSASSANSTERP*SACFREPHVLRCRA Trigger: TGCTCTGCACCTCAGCACATGGGGCTCCCTGAAGCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGAGCTGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | GACCCTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAGCTCAGGGGAACGGCTaGTGCCTGGAGGGAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: DPEPSSTVDLDRPWTRAPAQGNG*CLEGIS Trigger: GCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGC...TGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | GATCAACAGGCCAAGGGGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACTGCGGCCTGACAGCCTaGGGCCTGGGCACCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: DQQAKGQTGGTKTSYNKNCGLTA*GLGTQQ Trigger: CTGTTGGGTGCCCAGGCCTCAGGCTGTCAGGCCGCA...GTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCCCCTTGGCCTGTTGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | GACCCTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCACCCACTCTGAGAGATTaGCCAGCTCTTTGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: DPEPSSTVDLDRPWTRAPPTLRD*PALCQA Trigger: GGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGG...TGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | AGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTGCTCAGGGGAACGGCTaGTGCCTGGAGGGAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: RPPPGFKCSSQNVCRPKAAQGNG*CLEGIS Trigger: GCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGC...AGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCCAAGGGGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGAGCTCAGGGGAACGGCTaGTGCCTGGAGGGAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: RPRGRLGAQRPPTTRTGRAQGNG*CLEGIS Trigger: GCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGC...TCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCCCCTTGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCATAGCACCAGCTTGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCTCAGAGAAGGGTGGGTaGCGGGCCACCAGGTTGATG | + |
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Preference number: 2 (lower is better) Translates to: SHSTSLTPLAQRPTALSSSEKGG*RATRLM Trigger: CATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGA...GCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTGGTCATTCCACACCTTaGTCATCTCCTTGTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: EAWAPNRDAHLQCFPTTPGHSTP*SSPCAL Trigger: AAGGGCACAAGGAGATGAGCAAGGTGTGGAATGACC...AGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR CCA 90 bp | CCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCGTCCTCAGAGAAGGGTaGGTGCCGGGCCACCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: PPGFKCSSQNVCRPKARVVLREG*VPGHQV Trigger: AACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGAC...GACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR CCA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCAGGAGGGCAGAGGGGTaGTGTCGGAGCCCAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPRRAEG*CRSPKH Trigger: GTGCTTTGGGCTCCGACACCACCCCTCTGCCCTCCT...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | CCAGCTCTTTGCCAGGCCACAGGACAGGCCAGTCCTCCCATCCCTTaGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACCACTTACTG | + |
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Preference number: 2 (lower is better) Translates to: PALCQATGQASPPIP*LLGEPLGSPRNHLL Trigger: CAGTAAGTGGTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | CCCAAGGCTAGAGTCACTGCCCACTCTGAGAGATTGACCAGCTCTTaGCCAGGCCACAGGACAGGCCAGTCCTCCCATCCCTTTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PKARVTAHSERLTSS*PGHRTGQSSHPFAA Trigger: AGCAGCAAAGGGATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCTAGCCTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTCCTAGGATCGCACTGAAGTaGAAGATGTCCTCCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: AWAPNRDAHLQCFPTTPPRIALK*KMSSKA Trigger: AGCTTTGGAGGACATCTTTCACTTCAGTGCGATCCT...AGGAGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTAACACAAAAAGACCCTaGGCCTTCATCCACTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: EAWAPNRDAHLQCFPTTPNTKRP*AFIHCG Trigger: TCCACAGTGGATGAAGGCTCAGGGTCTTTTTGTGTT...AGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGCGTGGCTGGGGCACAACACAGGCTCAGACAGCACGATACCCAGAAGGGTACTGCTCCACGATTCGTaGCTCCAGCTGCTCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: QAWLGHNTGSDSTIPRRVLLHDS*LQLLHR Trigger: TCTGTGGAGCAGCTGGAGTCACGAATCGTGGAGCAG...TACCCTTCTGGGTATCGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCATAGCACCAGCTTGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCGCTTCTCTGTCTTTCTaGCAGCCCCAAGCGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SHSTSLTPLAQRPTALSSASLSF*QPQAWL Trigger: CAGCCACGCTTGGGGCTGCCAGAAAGACAGAGAAGC...GCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCCCACTCAGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCCAGGAACACACTGTTTaGAAAGAGGTTTTAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WAPLRPGKGTSRREIRCLQEHTV*KEVLVR Trigger: CCTCACTAAAACCTCTTTTCAAACAGTGTGTTCCTG...GAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCTGAGTGGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGGCACCCACAGTCCAGTCAGGGAAAGACTATGTGAGAAAAGGCAGGCTCGCTCAGGGGAACGGCTaGTGCCTGGAGGGAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: SQAPTVQSGKDYVRKGRLAQGNG*CLEGIS Trigger: GCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGC...GAGCCTGCCTTTTCTCACATAGTCTTTCCCTGACTGGACTGTGGGTGCCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | GACAAGCAGGCGGGAGATCCGGTGCCTCTTGTGCTTCTCTGTCTTTCTGGCAGCGCCGTACTTGTGCAGTaGCCGCTGGTGTTTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: DKQAGDPVPLVLLCLSGSAVLVQ*PLVFVK Trigger: CTTCACAAACACCAGCGGGCACTGCACAAGTACGGC...GCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGACATCAGACCTCCGCCTaGCTTCAAATGCTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LSLHPLWTLTGPGPELQGHQTSA*LQMLLP Trigger: TGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATG...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR CCA 90 bp | AGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTGAACTCCCTGTCGGCTaGAGGACAGTACAGGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RPPPGFKCSSQNVCRPKAELPVG*RTVQGH Trigger: GTGACCCTGTACTGTCCTCCAGCCGACAGGGAGTTC...AGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | AATGTCTGTAGGCCCAAGGCTAGAGTCACTGCCCACTCTGAGAGATaGACCAGCTCTTTGCCAGGCCACAGGACAGGCCAGTCCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: NVCRPKARVTAHSER*TSSLPGHRTGQSSH Trigger: ATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCTAGCCTTGGGCCTACAGACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCGTGCCGCTCACACAGGTCTTTGTAGGACTGCAACAAATCCAAGAAGAGGTCCCCATGTGCTGAGGTaGAGAGCAGCCCAGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRAAHTGLCRTATNPRRGPHVLR*RAAQEG Trigger: GCCCTCCTGGGCTGCTCTGCACCTCAGCACATGGGG...ACCTCTTCTTGGATTTGTTGCAGTCCTACAAAGACCTGTGTGAGCGGCACGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR GCA 90 bp | CATCTCCTTGTGCCCTTGGATCTGGGAGTTCACGAAGGCCCCCAGGATGTGCGAGCTGCACTCATCATCTaGCTCTTCATCAGGCCGTAC | + |
|
Preference number: 2 (lower is better) Translates to: HLLVPLDLGVHEGPQDVRAALII*LFIRPY Trigger: GTACGGCCTGATGAAGAGGCAGATGATGAGTGCAGC...TCGCACATCCTGGGGGCCTTCGTGAACTCCCAGATCCAAGGGCACAAGGAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCCATAGCACCAGCTTGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCGTGGAACCTCAAGTTTaGAGTCAGGCACCCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SHSTSLTPLAQRPTALSSVEPQV*SQAPTV Trigger: GACTGTGGGTGCCTGACTCCAAACTTGAGGTTCCAC...GCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTCTGTCCGCCAGCAGTGCAAACTCCACGGAGAGGCCCTTGAGCGCTTGCCAGGAACACACTGTTTaGAAAGAGGTTTTAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AALSASSANSTERPLSACQEHTV*KEVLVR Trigger: CCTCACTAAAACCTCTTTTCAAACAGTGTGTTCCTG...GCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR TCA 90 bp | CCCGGGACGCAATCCGCTCGGCTCTGTCTCGAAGCTTGTAGAAGCTGTTGTAGATCCTTGAGCTTGTGCTaGACATCCGAGCCACTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PGTQSARLCLEACRSCCRSLSLC*TSEPLK Trigger: CTTCAGTGGCTCGGATGTTCAGCACAAGCTCAAGGA...TCTACAACAGCTTCTACAAGCTTCGAGACAGAGCCGAGCGGATTGCGTCCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGCGCGGTGGCGTCAACACACTGTGAGGTCCAGCGAAGAGGCAGCTCAGCTCTAGAAACCACTTACTaGGTACAAAAGGCCCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GSAVASTHCEVQRRGSSALETTY*VQKALN Trigger: GTTAAGGGCCTTTTGTACCCAGTAAGTGGTTTCTAG...AGCTGAGCTGCCTCTTCGCTGGACCTCACAGTGTGTTGACGCCACCGCGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR-3UTR CCA 90 bp | GACAAGCAGGCGGGAGATCCGGTGCCTCTTGTGCTTCTCTGTCTTTCTGGCAGCCTTCTTCAACCAGGGTaGCTAACACCAAGTAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DKQAGDPVPLVLLCLSGSLLQPG*LTPSRE Trigger: CTCCCTACTTGGTGTTAGCCACCCTGGTTGAAGAAG...GCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCATAGCACCAGCTTGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCCTTCTTCAACCAGGGTaGCTAACACCAAGTAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SHSTSLTPLAQRPTALSSLLQPG*LTPSRE Trigger: CTCCCTACTTGGTGTTAGCCACCCTGGTTGAAGAAG...GCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTGTCTTTCTGGCAGCCCCAAGCGTGGCTGGGGCACAACACAGGCTCAGATCAGCTCCCGGCTCATaGCAAATTGAGTCTGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: FSVFLAAPSVAGAQHRLRSAPGS*QIESGC Trigger: ACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGA...TCTGAGCCTGTGTTGTGCCCCAGCCACGCTTGGGGCTGCCAGAAAGACAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGGCACCCACAGTCCAGTCAGGGAAAGACTATGTGAGAAAAGGCAGGCTCCATCAGACCTCCGCCTaGCTTCAAATGCTCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SQAPTVQSGKDYVRKGRLHQTSA*LQMLLP Trigger: TGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATG...GAGCCTGCCTTTTCTCACATAGTCTTTCCCTGACTGGACTGTGGGTGCCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | GAAGCTGTTGTAGACATTTCGAATCAGCTCCCGGCTCATGGCAAATaGAGTCTGGATGTCAGCTGGGAGGAAGTCCTTGGCCCTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: EAVVDISNQLPAHGK*SLDVSWEEVLGPSS Trigger: GCTGCTAGGGCCAAGGACTTCCTCCCAGCTGACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGATTCGAAATGTCTACAACAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR CAA 90 bp | TCCATAAAGTGCTTCATTCATCGAGCCGAATCCCATAGCACCAGCTaGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SIKCFIHRAESHSTS*TPLAQRPTALSSFF Trigger: GAAGAAGCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGATTCGGCTCGATGAATGAAGCACTTTATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGACAGGAACACACTGTTTaGAAAGAGGTTTTAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSLHPLWTLTGPGPELQGQEHTV*KEVLVR Trigger: CCTCACTAAAACCTCTTTTCAAACAGTGTGTTCCTG...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | GGCCCTCCGGCGGCCCTCGATGAACTCCCTGTCGGCTaGAGGACAGTACAGGGTCACCACGCAGGCAGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: GPPAALDELPVG*RTVQGHHAGSR Trigger: TCGGCTGCCTGCGTGGTGACCCTGTACTGTCCTCCAGCCGACAGGGAGTTCATCGAGGGCCGCCGGAGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | GGCTCACATCCAGGTGGAGCCTGCGGCCTGACAGCCTaGGGCCTGGGCACCCAACAGGGATGCCCACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSHPGGACGLTA*GLGTQQGCPPP Trigger: TGGAGGTGGGCATCCCTGTTGGGTGCCCAGGCCTCAGGCTGTCAGGCCGCAGGCTCCACCTGGATGTGAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | GTGGGGACACACGCCATCCTCCTGCGGGGAGCGCGGTaGCGTCAACACACTGTGAGGTCCAGCGAAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGTHAILLRGAR*RQHTVRSSEEA Trigger: TGCCTCTTCGCTGGACCTCACAGTGTGTTGACGCCACCGCGCTCCCCGCAGGAGGATGGCGTGTGTCCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | TCCTCCTGCGGGGAGCGCGGTGGCGTCAACACACTGTaGGGTCCAGCGAAGAGGCAGCTCAGCTTCGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSCGERGGVNTL*GPAKRQLSFGF Trigger: GAAGCCGAAGCTGAGCTGCCTCTTCGCTGGACCTCACAGTGTGTTGACGCCACCGCGCTCCCCGCAGGAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR GCA 72 bp | ACCGCCGGCAGCCCACAGGCAGCTCAGGGGAACGGCTaGTGCCTGGAGGGAATCAGCCAGGAACACACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TAGSPQAAQGNG*CLEGISQEHTV Trigger: AACAGTGTGTTCCTGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCGGCGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCCCACTCAGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCGCCCACTCTGAGAGATaGACCAGCTCTTTGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WAPLRPGKGTSRREIRCLAHSER*TSSLPG Trigger: GCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGC...GAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCTGAGTGGGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR CAA 90 bp | GACCCTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCATGCCGGGCCACCAGGTaGATGAAGCGCTTCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DPEPSSTVDLDRPWTRAPCRATR*MKRFRA Trigger: GGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCA...TGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTAGTCCTCCCATCCCTTaGCTGCTAGGTGAACCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: EAWAPNRDAHLQCFPTTPSPPIP*LLGEPL Trigger: TAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT...AGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR CCA 72 bp | GGGAGATCCGGTGCCTCTTGTGCTTCTCTGTCTTTCTaGCAGCCCCAAGCGTGGCTGGGGCACAACACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GRSGASCASLSF*QPQAWLGHNTG Trigger: GCCTGTGTTGTGCCCCAGCCACGCTTGGGGCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR CAA 90 bp | TTGCCACTAGTGGGGACACACGCCATCCTCCTGCGGGGAGCGCGGTGGCGTCAAGAGATCCGGTGCCTCTaGTGCTTCTCTGTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPLVGTHAILLRGARWRQEIRCL*CFSVFL Trigger: CAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTC...TTGACGCCACCGCGCTCCCCGCAGGAGGATGGCGTGTGTCCCCACTAGTGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR GCA 72 bp | AGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTaGCTCTTGTGCTTCTCTGTCTTTCTGGCAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPGKGTSRREIR*LLCFSVFLAAP Trigger: TGGGGCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR GCA 72 bp | GACTCCAGCTGCTCCACAGACTCAGGTTCTCGGCCGTaGGCTGCACTCATCATCTGCCTCTTCATCAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: DSSCSTDSGSRP*AALIICLFIRP Trigger: CGGCCTGATGAAGAGGCAGATGATGAGTGCAGCGCACGGCCGAGAACCTGAGTCTGTGGAGCAGCTGGAGTC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCAAGCGTGGCTGGGGCACAACACAGGCTCAGACAGCACGATACCCAGAAGAGTCCTCCCATCCCTTaGCTGCTAGGTGAACCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: APSVAGAQHRLRQHDTQKSPPIP*LLGEPL Trigger: TAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT...CTTCTGGGTATCGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCATAGCACCAGCTTGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCAAAAGGCAGGCTCTATaGCAGGCGTGGGGGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SHSTSLTPLAQRPTALSSKRQAL*QAWGTQ Trigger: CTGGGTCCCCCACGCCTGCAATAGAGCCTGCCTTTT...GCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR TCA 72 bp | GGCCCAAGGCTAGAGTCACTGCCCACTCTGAGAGATTaGCCAGCTCTTTGCCAGGCCACAGGACAGGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GPRLESLPTLRD*PALCQATGQAS Trigger: ACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCTAGCCTTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR TCA 72 bp | ATCAGGCCGTACTTGTGCAGTGCCCGCTGGTGTTTGTaGAGCACGCCCTTCTCGTGCCGCTCACACAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IRPYLCSARWCL*STPFSCRSHRS Trigger: AGACCTGTGTGAGCGGCACGAGAAGGGCGTGCTTCACAAACACCAGCGGGCACTGCACAAGTACGGCCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| 3UTR GCA 72 bp | AAGAGTTTAAGGAGCACGTCCTCAGAGAAGGGTGGGTaGCGGGCCACCAGGTTGATGAAGCGCTTCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KSLRSTSSEKGG*RATRLMKRFRA Trigger: GGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGACGTGCTCCTTAAACTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGAGCCCACTCTGAGAGATaGACCAGCTCTTTGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSLHPLWTLTGPGPELQGAHSER*TSSLPG Trigger: GCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGC...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR-3UTR CAA 90 bp | CCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCGCCCACTCTGAGAGATaGACCAGCTCTTTGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPGFKCSSQNVCRPKARVAHSER*TSSLPG Trigger: GCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGC...GACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGCAGGCGGGAGATCCGGTGCCTCTTGTGCTTCTCTGTCTTTCTGGCAGCTCCCATAGCACCAGCTaGACTCCCTTAGCCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DKQAGDPVPLVLLCLSGSSHSTS*TPLAQR Trigger: TCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA...GCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR GCA 72 bp | CAGCTGCTCCACAGACTCAGGTTCTCGGCCGTGCGCTaGACTCATCATCTGCCTCTTCATCAGGCCGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: QLLHRLRFSAVR*THHLPLHQAVL Trigger: AAGTACGGCCTGATGAAGAGGCAGATGATGAGTGCAGCGCACGGCCGAGAACCTGAGTCTGTGGAGCAGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | GAGGAAGAGTTTAAGGAGCACGTCCTCAGAGAAGGGTaGGTGCCGGGCCACCAGGTTGATGAAGCGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EEEFKEHVLREG*VPGHQVDEALQ Trigger: CTGAAGCGCTTCATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGACGTGCTCCTTAAACTCTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | TTCCACACCTTGCTCATCTCCTTGTGCCCTTGGATCTaGGAGTTCACGAAGGCCCCCAGGATGTGCGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FHTLLISLCPWI*EFTKAPRMCEV Trigger: CACCTCGCACATCCTGGGGGCCTTCGTGAACTCCCAGATCCAAGGGCACAAGGAGATGAGCAAGGTGTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | AAAGAGGTTTTAGTGAGGCCACCGGGAGCTCTGTCGTaGGTCTTGCCACTAGTGGGGACACACGCCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KEVLVRPPGALS*VLPLVGTHAIL Trigger: GAGGATGGCGTGTGTCCCCACTAGTGGCAAGACCCACGACAGAGCTCCCGGTGGCCTCACTAAAACCTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCTCATTCTCCTCCTTCTaGCCCTGCTGTGCAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPSFSSF*PCCAAL Trigger: CAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAATGA...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | GTCAGGCACCCACAGTCCAGTCAGGGAAAGACTATGTaGGAAAAGGCAGGCTCTATTGCAGGCGTGGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VRHPQSSQGKTM*EKAGSIAGVGD Trigger: GTCCCCCACGCCTGCAATAGAGCCTGCCTTTTCTCACATAGTCTTTCCCTGACTGGACTGTGGGTGCCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | TCTCCCACGCACTGGGCCGCCTCCTTGAGCTTGTGCTaGACATCCGAGCCACTGAAGGAGAGGAAGAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SPTHWAASLSLC*TSEPLKERKSL Trigger: TAAACTCTTCCTCTCCTTCAGTGGCTCGGATGTTCAGCACAAGCTCAAGGAGGCGGCCCAGTGCGTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | CATAGTCTGGATCACGTTCTCCTGCTCCACGATTCGTaGCTCCAGCTGCTCCACAGACTCAGGTTCTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HSLDHVLLLHDS*LQLLHRLRFSA Trigger: GGCCGAGAACCTGAGTCTGTGGAGCAGCTGGAGTCACGAATCGTGGAGCAGGAGAACGTGATCCAGACTATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR GCA 72 bp | CATCATCTGCCTCTTCATCAGGCCGTACTTGTGCAGTaGCCGCTGGTGTTTGTGAAGCACGCCCTTCTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: HHLPLHQAVLVQ*PLVFVKHALLV Trigger: CACGAGAAGGGCGTGCTTCACAAACACCAGCGGGCACTGCACAAGTACGGCCTGATGAAGAGGCAGATGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | AGACTATGTGAGAAAAGGCAGGCTCTATTGCAGGCGTaGGGGACCCAGAGCACTAGAGCACAGAGGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLCEKRQALLQA*GTQSTRAQRLV Trigger: CACCAGCCTCTGTGCTCTAGTGCTCTGGGTCCCCCACGCCTGCAATAGAGCCTGCCTTTTCTCACATAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | AGGTCATTCCACACCTTGCTCATCTCCTTGTGCCCTTaGATCTGGGAGTTCACGAAGGCCCCCAGGATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RSFHTLLISLCP*IWEFTKAPRMC Trigger: GCACATCCTGGGGGCCTTCGTGAACTCCCAGATCCAAGGGCACAAGGAGATGAGCAAGGTGTGGAATGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR GCA 72 bp | ACTGAAGTGAAAGATGTCCTCCAAAGCTCCAAGCACTaGACACTCACCTCCCCCTTGCATCAGACCTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: TEVKDVLQSSKH*TLTSPLHQTSA Trigger: GGCGGAGGTCTGATGCAAGGGGGAGGTGAGTGTGCAGTGCTTGGAGCTTTGGAGGACATCTTTCACTTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | ACCCAACACAAAAAGACCCTGAGCCTTCATCCACTGTaGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TQHKKTLSLHPL*TLTGPGPELQG Trigger: TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTCTTTTTGTGTTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | TGCTGCCTGGAGGGAATCAGCCAGGAACACACTGTTTaGAAAGAGGTTTTAGTGAGGCCACCGGGAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CCLEGISQEHTV*KEVLVRPPGAL Trigger: CAGAGCTCCCGGTGGCCTCACTAAAACCTCTTTTCAAACAGTGTGTTCCTGGCTGATTCCCTCCAGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | TTGACAGGCCCTGGACCAGAGCTCCAAGGATCGCACTaGAGTGAAAGATGTCCTCCAAAGCTCCAAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LTGPGPELQGSH*SERCPPKLQAL Trigger: CAGTGCTTGGAGCTTTGGAGGACATCTTTCACTTCAGTGCGATCCTTGGAGCTCTGGTCCAGGGCCTGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGGCACCCACAGTCCAGTCAGGGAAAGACTATGTGAGAAAAGGCAGGCTCGAGATCCGGTGCCTCTaGTGCTTCTCTGTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQAPTVQSGKDYVRKGRLEIRCL*CFSVFL Trigger: CAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTC...GAGCCTGCCTTTTCTCACATAGTCTTTCCCTGACTGGACTGTGGGTGCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCCAGGAACACACTGTTaGAAAAGAGGTTTTAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SDLRLASNAPPRMSVGPRPGTHC*KRGFSE Trigger: CTCACTAAAACCTCTTTTCAAACAGTGTGTTCCTGG...CCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | CCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCCCAGGAACACACTGTTaGAAAAGAGGTTTTAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PPGFKCSSQNVCRPKARVPGTHC*KRGFSE Trigger: CTCACTAAAACCTCTTTTCAAACAGTGTGTTCCTGG...GACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR CCA 72 bp | AGCTGTTGTAGACATTTCGAATCAGCTCCCGGCTCATaGCAAATTGAGTCTGGATGTCAGCTGGGAGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SCCRHFESAPGS*QIESGCQLGGS Trigger: ACTTCCTCCCAGCTGACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGATTCGAAATGTCTACAACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCCAGGAACACACTGTTaGAAAAGAGGTTTTAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GRLGAQRPPTTRTGRHKDPGTHC*KRGFSE Trigger: CTCACTAAAACCTCTTTTCAAACAGTGTGTTCCTGG...GTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| 3UTR TCA 72 bp | TGTAAACACTTCCAGTTTATTGGGTGTGGCAGTAACTaGTCCCCGCAGTCCATAAAGTGCTTCATTCATCGA | + |
|
Preference number: 3 (lower is better) Translates to: CKHFQFIGCGSN*SPQSIKCFIHR Trigger: TCGATGAATGAAGCACTTTATGGACTGCGGGGATCAGTTACTGCCACACCCAATAAACTGGAAGTGTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| 3UTR CAA 72 bp | ACGTCCTCAGAGAAGGGTGGGTGCCGGGCCACCAGGTaGATGAAGCGCTTCAGGGCCCTCCGGCGGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSSEKGGCRATR*MKRFRALRRPS Trigger: CGAGGGCCGCCGGAGGGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGACGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | AGACCGCCGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAACTGCTCCACGATTCGTaGCTCCAGCTGCTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPPAAHRQLRGTAAAWRELLHDS*LQLLHR Trigger: TCTGTGGAGCAGCTGGAGTCACGAATCGTGGAGCAG...TTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCGGCGGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | CGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCACCAGGATGTGCGAGGTaGGAGGCAGGTAGACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQPTGSSGERLLPGGNQPPGCAR*EAGRRG Trigger: TCCACGTCTACCTGCCTCTCACCTCGCACATCCTGG...TGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | ACCCTAACTTCCCACTACCGACCTGATCAACAGGCCAAGGGGCAGACTGGGGGCCTCCGCCTCAGCAGCTaGAGCGACTGCCGGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTSHYRPDQQAKGQTGGLRLSS*SDCRRG Trigger: CCCTCGCCGGCAGTCGCTGCAGCTGCTGAGGCGGAG...GCCCCCAGTCTGCCCCTTGGCCTGTTGATCAGGTCGGTAGTGGGAAGTTAGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031539.12 |
||
| CDS-3UTR GCA 90 bp | CGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCATCTGTCCGCCAGCAGTaGAAACTCCACGGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQPTGSSGERLLPGGNQPSVRQQ*KLHGEA Trigger: GGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGA...TGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTCCTGTCCTCAGAGAAGGGTaGGTGCCGGGCCACCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AWAPNRDAHLQCFPTTPPVLREG*VPGHQV Trigger: AACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGAC...AGGAGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR CCA 90 bp | GAGGCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTGTCCTCAGAGAAGGGTaGGTGCCGGGCCACCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EAWAPNRDAHLQCFPTTPVLREG*VPGHQV Trigger: AACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGAC...AGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR GCA 90 bp | AGACCGCCGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAAGCCGTACTTGTGCAGTaGCCGCTGGTGTTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPPAAHRQLRGTAAAWREAVLVQ*PLVFVK Trigger: CTTCACAAACACCAGCGGGCACTGCACAAGTACGGC...TTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCGGCGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CCA 90 bp | TTGCCACTAGTGGGGACACACGCCATCCTCCTGCGGGGAGCGCGGTGGCGTCAAGTAGGACAGCAGCAGTaGGTTCCCCTGCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLVGTHAILLRGARWRQVGQQQ*VPLRHL Trigger: CAGATGCCGCAGGGGAACCCACTGCTGCTGTCCTAC...TTGACGCCACCGCGCTCCCCGCAGGAGGATGGCGTGTGTCCCCACTAGTGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| CDS-3UTR CCA 90 bp | CCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCAGGAACAGTCCTCAGAGAAGGGTaGGTGCCGGGCCACCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTGSSGERLLPGGNQPGTVLREG*VPGHQV Trigger: AACCTGGTGGCCCGGCACCCACCCTTCTCTGAGGAC...TGTTCCTGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| 3UTR CAA 72 bp | CTGTCCGCCAGCAGTGCAAACTCCACGGAGAGGCCCTaGAGCGCTTGCTTCAGGGAGCCCCATGTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSASSANSTERP*SACFREPHVLR Trigger: CCTCAGCACATGGGGCTCCCTGAAGCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | GCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCAGGCGGCTCATGGCAAATTaGGTCTGGATGTCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAHRQLRGTAAAWRESARRLMAN*VWMSAG Trigger: CCCAGCTGACATCCAGACTCAATTTGCCATGAGCCG...CCTGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | GCCACAGGACAGGCCAGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCAGCAGTGGGTTCCCCTaGGGCATCTGCATTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ATGQASPPIPLLLGEPLGSSGFP*GICIRP Trigger: CGGGCGAATGCAGATGCCGCAGGGGAACCCACTGCT...GCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACTGGCCTGTCCTGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031539.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCAGGGCCGTACTTGTGCAGTaGCCGCTGGTGTTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAHRQLRGTAAAWRESARAVLVQ*PLVFVK Trigger: CTTCACAAACACCAGCGGGCACTGCACAAGTACGGC...CCTGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | GCAGCTCTGTCCGCCAGCAGTGCAAACTCCACGGAGAGGCCCTTGAGCGCTTGCCCTTCTTCTCAGGGATaGGCTCCACCTGCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AALSASSANSTERPLSACPSSQG*APPAPC Trigger: ACACGGTGCAGGTGGAGCTCATCCCTGAGAAGAAGG...GCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGAGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGATTGACCAGCTCTTTGCCAGGCCACAGGACAGGCCAGTCCTCCCATCCCGCCCGCTGGTGTTTGTaGAGCACGCCCTTCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERLTSSLPGHRTGQSSHPARWCL*STPFSC Trigger: GCACGAGAAGGGCGTGCTTCACAAACACCAGCGGGC...GGGATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | GCCCCAAGCGTGGCTGGGGCACAACACAGGCTCAGACAGCACGATACCCAGAAGCCAGGATGTGCGAGGTaGGAGGCAGGTAGACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: APSVAGAQHRLRQHDTQKPGCAR*EAGRRG Trigger: TCCACGTCTACCTGCCTCTCACCTCGCACATCCTGG...CTTCTGGGTATCGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR GCA 90 bp | GACCCTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAGGGATGAGCTCCACCTaGACCGTGTCCTTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPEPSSTVDLDRPWTRAPGMSST*TVSLAS Trigger: GCTGGCCAAGGACACGGTGCAGGTGGAGCTCATCCC...TGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCACGGAGTTCCATAGTCTaGATCACGTTCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQPTGSSGERLLPGGNQPRSSIV*ITFSCS Trigger: GGAGCAGGAGAACGTGATCCAGACTATGGAACTCCG...TGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| 3UTR CAA 72 bp | CAGCAGTGCAAACTCCACGGAGAGGCCCTTGAGCGCTaGCTTCAGGGAGCCCCATGTGCTGAGGTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQCKLHGEALER*LQGAPCAEVQS Trigger: GCTCTGCACCTCAGCACATGGGGCTCCCTGAAGCAAGCGCTCAAGGGCCTCTCCGTGGAGTTTGCACTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| 3UTR CAA 72 bp | GTTTTAGTGAGGCCACCGGGAGCTCTGTCGTGGGTCTaGCCACTAGTGGGGACACACGCCATCCTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVRPPGALSWV*PLVGTHAILLR Trigger: CCGCAGGAGGATGGCGTGTGTCCCCACTAGTGGCAAGACCCACGACAGAGCTCCCGGTGGCCTCACTAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACCACGGGCCCTCCACTCAGTaGCCTGGGATGTTCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPIPLLLGEPLGSPRNHGPSTQ*PGMFVG Trigger: GCCCACGAACATCCCAGGTCACTGAGTGGAGGGCCC...GTGGTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031539.12 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACCACCCCCATGTGCTGAGGTaGAGAGCAGCCCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPIPLLLGEPLGSPRNHPHVLR*RAAQEG Trigger: GCCCTCCTGGGCTGCTCTGCACCTCAGCACATGGGG...GTGGTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | CCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCCCCCATGTGCTGAGGTaGAGAGCAGCCCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGFKCSSQNVCRPKARVPHVLR*RAAQEG Trigger: GCCCTCCTGGGCTGCTCTGCACCTCAGCACATGGGG...GACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | AGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTCCCCATGTGCTGAGGTaGAGAGCAGCCCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPPGFKCSSQNVCRPKAPHVLR*RAAQEG Trigger: GCCCTCCTGGGCTGCTCTGCACCTCAGCACATGGGG...AGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CCA 90 bp | GCCACAGGACAGGCCAGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTTGTGCCCTTGGATCTaGGAGTTCACGAAGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGQASPPIPLLLGEPLGLCPWI*EFTKAP Trigger: GGGGGCCTTCGTGAACTCCCAGATCCAAGGGCACAA...GCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACTGGCCTGTCCTGTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| 3UTR CAA 72 bp | GGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCTaGTGCTTCTCTGTCTTTCTGGCAGCCCCAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGTSRREIRCL*CFSVFLAAPSV Trigger: CACGCTTGGGGCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | CCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCGCCCGCTGGTGTTTGTaGAGCACGCCCTTCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGFKCSSQNVCRPKARVARWCL*STPFSC Trigger: GCACGAGAAGGGCGTGCTTCACAAACACCAGCGGGC...GACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | AGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTGCCCGCTGGTGTTTGTaGAGCACGCCCTTCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPPGFKCSSQNVCRPKAARWCL*STPFSC Trigger: GCACGAGAAGGGCGTGCTTCACAAACACCAGCGGGC...AGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | TCCCATAGCACCAGCTTGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCCCAGGATGTGCGAGGTaGGAGGCAGGTAGACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSTSLTPLAQRPTALSSPGCAR*EAGRRG Trigger: TCCACGTCTACCTGCCTCTCACCTCGCACATCCTGG...GCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCCCTTGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTGGGATGAGCTCCACCTaGACCGTGTCCTTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPLHQTSAWLQMLLPECGMSST*TVSLAS Trigger: GCTGGCCAAGGACACGGTGCAGGTGGAGCTCATCCC...ACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCAAGGGGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACCACGGGATGAGCTCCACCTaGACCGTGTCCTTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPIPLLLGEPLGSPRNHGMSST*TVSLAS Trigger: GCTGGCCAAGGACACGGTGCAGGTGGAGCTCATCCC...GTGGTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR GCA 90 bp | GAGGCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTGAAGAGCTGGAACCATaGGGTACGGGAACTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EAWAPNRDAHLQCFPTTPEELEP*GTGTCE Trigger: TTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTC...AGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| CDS-3UTR GCA 90 bp | CTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGATCGCACTCAGAGAAGGGTGGGTaGCGGGCCACCAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHPLWTLTGPGPELQGSHSEKGG*RATRLM Trigger: CATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGA...GTGCGATCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | CAAGCGTGGCTGGGGCACAACACAGGCTCAGACAGCACGATACCCAGAAGGGTATCAGAGAAGGGTGGGTaGCGGGCCACCAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QAWLGHNTGSDSTIPRRVSEKGG*RATRLM Trigger: CATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGA...TACCCTTCTGGGTATCGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTCTTTCTGGCAGCCCCAAGCGTGGCTGGGGCACAACACAGGCTCAGATCTGTCCGCCAGCAGTaGAAACTCCACGGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVFLAAPSVAGAQHRLRSVRQQ*KLHGEA Trigger: GGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGA...TCTGAGCCTGTGTTGTGCCCCAGCCACGCTTGGGGCTGCCAGAAAGACAGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR CCA 90 bp | GACAAGCAGGCGGGAGATCCGGTGCCTCTTGTGCTTCTCTGTCTTTCTGGCAGCGTAGGACAGCAGCAGTaGGTTCCCCTGCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKQAGDPVPLVLLCLSGSVGQQQ*VPLRHL Trigger: CAGATGCCGCAGGGGAACCCACTGCTGCTGTCCTAC...GCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| CDS-3UTR CCA 90 bp | GCCTGGGCACCCAACAGGGATGCCCACCTCCAGTGCTTCCCCACAACCCCTCCTTCAGCTCCCGGCTCATaGCAAATTGAGTCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AWAPNRDAHLQCFPTTPPSAPGS*QIESGC Trigger: ACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGA...AGGAGGGGTTGTGGGGAAGCACTGGAGGTGGGCATCCCTGTTGGGTGCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACCACAGGAGGGCAGAGGGGTaGTGTCGGAGCCCAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPPIPLLLGEPLGSPRNHRRAEG*CRSPKH Trigger: GTGCTTTGGGCTCCGACACCACCCCTCTGCCCTCCT...GTGGTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| 3UTR CAA 72 bp | AGAGTCACTGCCCACTCTGAGAGATTGACCAGCTCTTaGCCAGGCCACAGGACAGGCCAGTCCTCCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTAHSERLTSS*PGHRTGQSSHP Trigger: GGGATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| 3UTR CAA 72 bp | AGGCCCAAGGCTAGAGTCACTGCCCACTCTGAGAGATaGACCAGCTCTTTGCCAGGCCACAGGACAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPKARVTAHSER*TSSLPGHRTGQ Trigger: CTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCTAGCCTTGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR TCA 90 bp | CTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGATCGCACCCTTCTTCTCAGGGATaGGCTCCACCTGCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHPLWTLTGPGPELQGSHPSSQG*APPAPC Trigger: ACACGGTGCAGGTGGAGCTCATCCCTGAGAAGAAGG...GTGCGATCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | CGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCAGCTCCTTTCCAAATATaGGAAGATCAGCAGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQPTGSSGERLLPGGNQPAPFQI*EDQQRC Trigger: ACAACGCTGCTGATCTTCTCATATTTGGAAAGGAGC...TGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | CTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGATCGCACCTGCTCCACGATTCGTaGCTCCAGCTGCTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHPLWTLTGPGPELQGSHLLHDS*LQLLHR Trigger: TCTGTGGAGCAGCTGGAGTCACGAATCGTGGAGCAG...GTGCGATCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | AGGCCAAGGGGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGATCTGTCCGCCAGCAGTaGAAACTCCACGGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPRGRLGAQRPPTTRTGRSVRQQ*KLHGEA Trigger: GGCCTCTCCGTGGAGTTTGCACTGCTGGCGGACAGA...TCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCCCCTTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTGGCAGCCCCAAGCGTGGCTGGGGCACAACACAGGCTCAGACAGCACGCATTCTCCTCCTTCTTaGCCTGCTGTGCAGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFWQPQAWLGHNTGSDSTHSPPS*PAVQLC Trigger: ACAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAATG...CGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTGGGGCTGCCAGAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR GCA 90 bp | ACCCTAACTTCCCACTACCGACCTGATCAACAGGCCAAGGGGCAGACTGGGGGCATCAGGCCGTACTTGTaGAGTGCCCGCTGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLTSHYRPDQQAKGQTGGIRPYL*SARWCL Trigger: CAAACACCAGCGGGCACTGCACAAGTACGGCCTGAT...GCCCCCAGTCTGCCCCTTGGCCTGTTGATCAGGTCGGTAGTGGGAAGTTAGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGATTGACCAGCTCTTTGCCAGGCCACAGGACAGGCCAGTCCTCCCATCCCATCAGGCCGTACTTGTaGAGTGCCCGCTGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERLTSSLPGHRTGQSSHPIRPYL*SARWCL Trigger: CAAACACCAGCGGGCACTGCACAAGTACGGCCTGAT...GGGATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | AGGCCAAGGGGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGAGTAGGACAGCAGCAGTaGGTTCCCCTGCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPRGRLGAQRPPTTRTGRVGQQQ*VPLRHL Trigger: CAGATGCCGCAGGGGAACCCACTGCTGCTGTCCTAC...TCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCCCCTTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGACTCCCAGCACTCTCTTaGGCGGAAGAGCTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLHPLWTLTGPGPELQGLPALS*AEELEP Trigger: TGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAG...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR CCA 90 bp | AATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACTGCCCACTCTGAGGAGGGCAGAGGGGTaGTGTCGGAGCCCAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NAPPRMSVGPRLESLPTLRRAEG*CRSPKH Trigger: GTGCTTTGGGCTCCGACACCACCCCTCTGCCCTCCT...CAGAGTGGGCAGTGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | GCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACTGCCCAGGAGGGCAGAGGGGTaGTGTCGGAGCCCAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASNAPPRMSVGPRLESLPRRAEG*CRSPKH Trigger: GTGCTTTGGGCTCCGACACCACCCCTCTGCCCTCCT...GGGCAGTGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR TCA 90 bp | ACCTCCCCCTTGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCCTTCTTCTCAGGGATaGGCTCCACCTGCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSPLHQTSAWLQMLLPECPSSQG*APPAPC Trigger: ACACGGTGCAGGTGGAGCTCATCCCTGAGAAGAAGG...ACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCAAGGGGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | ACCCTAACTTCCCACTACCGACCTGATCAACAGGCCAAGGGGCAGACTGGGGGCCGGTACGGGAACTTGTaGAGCAGCACTTCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTSHYRPDQQAKGQTGGRYGNL*SSTSWK Trigger: CTTCCATGAAGTGCTGCTTCACAAGTTCCCGTACCG...GCCCCCAGTCTGCCCCTTGGCCTGTTGATCAGGTCGGTAGTGGGAAGTTAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR TCA 90 bp | GACAAGCAGGCGGGAGATCCGGTGCCTCTTGTGCTTCTCTGTCTTTCTGGCAGCCGGCTCATGGCAAATTaGGTCTGGATGTCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DKQAGDPVPLVLLCLSGSRLMAN*VWMSAG Trigger: CCCAGCTGACATCCAGACTCAATTTGCCATGAGCCG...GCTGCCAGAAAGACAGAGAAGCACAAGAGGCACCGGATCTCCCGCCTGCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
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| CDS-3UTR GCA 90 bp | ACCTCCCCCTTGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTAGCACGCCCTTCTCGTaGCGCTCACACAGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSPLHQTSAWLQMLLPECSTPFS*RSHRSL Trigger: CAAAGACCTGTGTGAGCGGCACGAGAAGGGCGTGCT...ACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCAAGGGGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | AGGCCAAGGGGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGAAGCACGCCCTTCTCGTaGCGCTCACACAGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPRGRLGAQRPPTTRTGRSTPFS*RSHRSL Trigger: CAAAGACCTGTGTGAGCGGCACGAGAAGGGCGTGCT...TCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCCCCTTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | TGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAGCACGCCCTTCTCGTaGCGCTCACACAGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CIRPPPGFKCSSQNVCRPSTPFS*RSHRSL Trigger: CAAAGACCTGTGTGAGCGGCACGAGAAGGGCGTGCT...GGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGAATCAGGCCGTACTTGTaGAGTGCCCGCTGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLHPLWTLTGPGPELQGIRPYL*SARWCL Trigger: CAAACACCAGCGGGCACTGCACAAGTACGGCCTGAT...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | AGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACCACTTGTGCCCTTGGATCTaGGAGTTCACGAAGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPPIPLLLGEPLGSPRNHLCPWI*EFTKAP Trigger: GGGGGCCTTCGTGAACTCCCAGATCCAAGGGCACAA...GTGGTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| 3UTR CAA 72 bp | CTCCAAAGCTCCAAGCACTGCACACTCACCTCCCCCTaGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQSSKHCTLTSP*HQTSAWLQMLL Trigger: GAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCAAGGGGGAGGTGAGTGTGCAGTGCTTGGAGCTTTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR TCA 90 bp | AATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACTGCCCACTCTGCCTTCTTCTCAGGGATaGGCTCCACCTGCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NAPPRMSVGPRLESLPTLPSSQG*APPAPC Trigger: ACACGGTGCAGGTGGAGCTCATCCCTGAGAAGAAGG...CAGAGTGGGCAGTGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR TCA 90 bp | CGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACTGCTCCACGATTCGTaGCTCCAGCTGCTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLASNAPPRMSVGPRLESLLHDS*LQLLHR Trigger: TCTGTGGAGCAGCTGGAGTCACGAATCGTGGAGCAG...TGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | GAGAGATTGACCAGCTCTTTGCCAGGCCACAGGACAGGCCAGTCCTCCCATCCCGAAGAGCTGGAACCATaGGGTACGGGAACTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERLTSSLPGHRTGQSSHPEELEP*GTGTCE Trigger: TTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTC...GGGATGGGAGGACTGGCCTGTCCTGTGGCCTGGCAAAGAGCTGGTCAATCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR GCA 90 bp | CAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGTCAGAGAAGGGTGGGTaGCGGGCCACCAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QTGGTKTSYNKNRETQRPSEKGG*RATRLM Trigger: CATCAACCTGGTGGCCCGGCACCCACCCTTCTCTGA...CGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | CAAGCGTGGCTGGGGCACAACACAGGCTCAGACAGCACGATACCCAGAAGGGTAGCTGCACTCATCATCTaGCTCTTCATCAGGCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QAWLGHNTGSDSTIPRRVAALII*LFIRPY Trigger: GTACGGCCTGATGAAGAGGCAGATGATGAGTGCAGC...TACCCTTCTGGGTATCGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
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| CDS-3UTR GCA 90 bp | AAGACCCTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCGCTGCACTCATCATCTaGCTCTTCATCAGGCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSLHPLWTLTGPGPELAALII*LFIRPY Trigger: GTACGGCCTGATGAAGAGGCAGATGATGAGTGCAGC...GAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | CGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACTCCCAGCACTCTCTTaGGCGGAAGAGCTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RLASNAPPRMSVGPRLESLPALS*AEELEP Trigger: TGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAG...TGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR CCA 90 bp | AGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACCACAGTCTGGATGTCAGCTaGGAGGAAGTCCTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPIPLLLGEPLGSPRNHSLDVS*EEVLGP Trigger: AGGGCCAAGGACTTCCTCCCAGCTGACATCCAGACT...GTGGTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | AGGCCAAGGGGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGAAGTCTGGATGTCAGCTaGGAGGAAGTCCTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPRGRLGAQRPPTTRTGRSLDVS*EEVLGP Trigger: AGGGCCAAGGACTTCCTCCCAGCTGACATCCAGACT...TCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCCCCTTGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| 3UTR CAA 72 bp | CACAAAAAGACCCTGAGCCTTCATCCACTGTGGACCTaGACAGGCCCTGGACCAGAGCTCCAAGGATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKKTLSLHPLWT*TGPGPELQGSH Trigger: GTGCGATCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTCTTTTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR TCA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCCGGTACGGGAACTTGTaGAGCAGCACTTCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPRYGNL*SSTSWK Trigger: CTTCCATGAAGTGCTGCTTCACAAGTTCCCGTACCG...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR TCA 90 bp | AGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTCGGTACGGGAACTTGTaGAGCAGCACTTCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPPPGFKCSSQNVCRPKARYGNL*SSTSWK Trigger: CTTCCATGAAGTGCTGCTTCACAAGTTCCCGTACCG...AGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | ACCTCCCCCTTGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTTCCTTGAGCTTGTGCTaGACATCCGAGCCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSPLHQTSAWLQMLLPECSLSLC*TSEPLK Trigger: CTTCAGTGGCTCGGATGTTCAGCACAAGCTCAAGGA...ACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCAAGGGGGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | TCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGTCCTTGAGCTTGTGCTaGACATCCGAGCCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDLRLASNAPPRMSVGPRSLSLC*TSEPLK Trigger: CTTCAGTGGCTCGGATGTTCAGCACAAGCTCAAGGA...CCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGACTATGTGAGAAAAGGCAGGCTCTATTGCAGGCGTGGGGGACCCAGACGGCTCATGGCAAATTaGGTCTGGATGTCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKDYVRKGRLYCRRGGPRRLMAN*VWMSAG Trigger: CCCAGCTGACATCCAGACTCAATTTGCCATGAGCCG...TCTGGGTCCCCCACGCCTGCAATAGAGCCTGCCTTTTCTCACATAGTCTTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR GCA 90 bp | CAAGCGTGGCTGGGGCACAACACAGGCTCAGACAGCACGATACCCAGAAGGGTAGAAGAGCTGGAACCATaGGGTACGGGAACTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAWLGHNTGSDSTIPRRVEELEP*GTGTCE Trigger: TTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTC...TACCCTTCTGGGTATCGTGCTGTCTGAGCCTGTGTTGTGCCCCAGCCACGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
||
| CDS-3UTR GCA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCCATTCTCCTCCTTCTTaGCCTGCTGTGCAGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPHSPPS*PAVQLC Trigger: ACAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAATG...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | AGGCCCAAGGCTAGAGTCACTGCCCACTCTGAGAGATTGACCAGCTCTTTGCCAGCCGTACTTGTGCAGTaGCCGCTGGTGTTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPKARVTAHSERLTSSLPAVLVQ*PLVFVK Trigger: CTTCACAAACACCAGCGGGCACTGCACAAGTACGGC...TGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCTAGCCTTGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCCCTTGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTGCTGCACTCATCATCTaGCTCTTCATCAGGCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TSPLHQTSAWLQMLLPECAALII*LFIRPY Trigger: GTACGGCCTGATGAAGAGGCAGATGATGAGTGCAGC...ACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCAAGGGGGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGATCGCACTTGCTCATCTCCTTGTaGCCTTGGATCTGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHPLWTLTGPGPELQGSHLLISL*PWIWEF Trigger: GAACTCCCAGATCCAAGGGCACAAGGAGATGAGCAA...GTGCGATCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGATTGCTCATCTCCTTGTaGCCTTGGATCTGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLHPLWTLTGPGPELQGLLISL*PWIWEF Trigger: GAACTCCCAGATCCAAGGGCACAAGGAGATGAGCAA...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | GCCAGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACGGTCATTCCACACCTTaGTCATCTCCTTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASPPIPLLLGEPLGSPRNGHSTP*SSPCAL Trigger: AAGGGCACAAGGAGATGAGCAAGGTGTGGAATGACC...GTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGAGGTCATTCCACACCTTaGTCATCTCCTTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLHPLWTLTGPGPELQGGHSTP*SSPCAL Trigger: AAGGGCACAAGGAGATGAGCAAGGTGTGGAATGACC...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CCA 90 bp | TCCCATAGCACCAGCTTGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCTAGCTCAGCTCCCGGCTCATaGCAAATTGAGTCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSTSLTPLAQRPTALSSSAPGS*QIESGC Trigger: ACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGA...GCTAGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
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| CDS-3UTR CCA 90 bp | CAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGTTGTGCCCTTGGATCTaGGAGTTCACGAAGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTGGTKTSYNKNRETQRPLCPWI*EFTKAP Trigger: GGGGGCCTTCGTGAACTCCCAGATCCAAGGGCACAA...CGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| 3UTR CAA 72 bp | TGCTTCATTCATCGAGCCGAATCCCATAGCACCAGCTaGACTCCCTTAGCCCAGAGACCCACTGCCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFIHRAESHSTS*TPLAQRPTALS Trigger: AGACAGGGCAGTGGGTCTCTGGGCTAAGGGAGTCAAGCTGGTGCTATGGGATTCGGCTCGATGAATGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| 3UTR CAA 72 bp | AGGCAGCTCAGCTTCGGCTTCAGGTCATTCCACACCTaGCTCATCTCCTTGTGCCCTTGGATCTGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLSFGFRSFHT*LISLCPWIWEF Trigger: GAACTCCCAGATCCAAGGGCACAAGGAGATGAGCAAGGTGTGGAATGACCTGAAGCCGAAGCTGAGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGACTATGTGAGAAAAGGCAGGCTCTATTGCAGGCGTGGGGGACCCAGATCCTTGAGCTTGTGCTaGACATCCGAGCCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKDYVRKGRLYCRRGGPRSLSLC*TSEPLK Trigger: CTTCAGTGGCTCGGATGTTCAGCACAAGCTCAAGGA...TCTGGGTCCCCCACGCCTGCAATAGAGCCTGCCTTTTCTCACATAGTCTTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCCCTTGCATCAGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTACCTCGTACTCCACATaGTTAAGGAAGAGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPLHQTSAWLQMLLPECTSYST*LRKRPF Trigger: GAAGGGCCTCTTCCTTAAGCATGTGGAGTACGAGGT...ACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCTGATGCAAGGGGGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR GCA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCACCTCGTACTCCACATaGTTAAGGAAGAGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPTSYST*LRKRPF Trigger: GAAGGGCCTCTTCCTTAAGCATGTGGAGTACGAGGT...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR GCA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCGAAGAGCTGGAACCATaGGGTACGGGAACTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPEELEP*GTGTCE Trigger: TTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTC...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR GCA 90 bp | AATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACTGCCCACTCTGCATTCTCCTCCTTCTTaGCCTGCTGTGCAGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NAPPRMSVGPRLESLPTLHSPPS*PAVQLC Trigger: ACAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAATG...CAGAGTGGGCAGTGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR GCA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCTTGCTCATCTCCTTGTaGCCTTGGATCTGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPLLISL*PWIWEF Trigger: GAACTCCCAGATCCAAGGGCACAAGGAGATGAGCAA...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CCA 90 bp | CAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGAGTCTGGATGTCAGCTaGGAGGAAGTCCTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTGGTKTSYNKNRETQRPSLDVS*EEVLGP Trigger: AGGGCCAAGGACTTCCTCCCAGCTGACATCCAGACT...CGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | CGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACGGAGTTCCATAGTCTaGATCACGTTCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLASNAPPRMSVGPRLESRSSIV*ITFSCS Trigger: GGAGCAGGAGAACGTGATCCAGACTATGGAACTCCG...TGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAAGGCTAGAGTCACTGCCCACTCTGAGAGATTGACCAGCTCTTTGCCACGGAGTTCCATAGTCTaGATCACGTTCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPKARVTAHSERLTSSLPRSSIV*ITFSCS Trigger: GGAGCAGGAGAACGTGATCCAGACTATGGAACTCCG...TGGCAAAGAGCTGGTCAATCTCTCAGAGTGGGCAGTGACTCTAGCCTTGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | CCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCATCTCCTTGTGCCCTTaGATCTGGGAGTTCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPGFKCSSQNVCRPKARVISLCP*IWEFTK Trigger: CTTCGTGAACTCCCAGATCCAAGGGCACAAGGAGAT...GACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR TCA 90 bp | GCCAGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCTCCCCTAGAAACGCTCCTTTCCAAATATaGGAAGATCAGCAGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPPIPLLLGEPLGSPRNAPFQI*EDQQRC Trigger: ACAACGCTGCTGATCTTCTCATATTTGGAAAGGAGC...GTTTCTAGGGGAGCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR GCA 90 bp | CAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCACAACCTCGTACTCCACATaGTTAAGGAAGAGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRPPTTRTGRHKDRRQPTTSYST*LRKRPF Trigger: GAAGGGCCTCTTCCTTAAGCATGTGGAGTACGAGGT...TGTGGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR GCA 90 bp | GGGAAAGACTATGTGAGAAAAGGCAGGCTCTATTGCAGGCGTGGGGGACCCAGAACCTCGTACTCCACATaGTTAAGGAAGAGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKDYVRKGRLYCRRGGPRTSYST*LRKRPF Trigger: GAAGGGCCTCTTCCTTAAGCATGTGGAGTACGAGGT...TCTGGGTCCCCCACGCCTGCAATAGAGCCTGCCTTTTCTCACATAGTCTTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000197880.5 |
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| CDS-3UTR GCA 90 bp | AATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCACTGCCCACTCTGGGTCATTCCACACCTTaGTCATCTCCTTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NAPPRMSVGPRLESLPTLGHSTP*SSPCAL Trigger: AAGGGCACAAGGAGATGAGCAAGGTGTGGAATGACC...CAGAGTGGGCAGTGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | AAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCACAGTCAGCTCCCGGCTCATaGCAAATTGAGTCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KDLLQQEQGDTKTAGSPQSAPGS*QIESGC Trigger: ACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGA...CTGTGGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | AAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCACAGATCTCCTTGTGCCCTTaGATCTGGGAGTTCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDLLQQEQGDTKTAGSPQISLCP*IWEFTK Trigger: CTTCGTGAACTCCCAGATCCAAGGGCACAAGGAGAT...CTGTGGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CCA 90 bp | CGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTAGAGTCAATCTCCTTGTGCCCTTaGATCTGGGAGTTCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLASNAPPRMSVGPRLESISLCP*IWEFTK Trigger: CTTCGTGAACTCCCAGATCCAAGGGCACAAGGAGAT...TGACTCTAGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| 3UTR CAA 72 bp | GTAGACATTTCGAATCAGCTCCCGGCTCATGGCAAATaGAGTCTGGATGTCAGCTGGGAGGAAGTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDISNQLPAHGK*SLDVSWEEVLG Trigger: GCCAAGGACTTCCTCCCAGCTGACATCCAGACTCAATTTGCCATGAGCCGGGAGCTGATTCGAAATGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| CDS CCA 90 bp | TCGCCCGGGGTCCAGGGCCCTCCACTCAGTGACCTGGGATGTTCGTaGGCCTGTCGCCGGCGGATCCGCCTCCTCGTCAGCCTCCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGVQGPPLSDLGCS*ACRRRIRLLVSLRL Trigger: GAGGCGGAGGCTGACGAGGAGGCGGATCCGCCGGCGACAGGCCCACGAACATCCCAGGTCACTGAGTGGAGGGCCCTGGACCCCGGGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031539.12 |
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| CDS-3UTR CAA 90 bp | AGACCGCCGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATGCCGGGCCACCAGGTaGATGAAGCGCTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPAAHRQLRGTAAAWRECRATR*MKRFRA Trigger: GGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCA...TTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCGGCGGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS CCA 90 bp | CGTGTCCTTGGCCAGCAGCTCCTGCAGGGTGTAGGACAGCAGCAGTaGGTTCCCCTGCGGCATCTGCATTCGCCCGGGGTCCAGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RVLGQQLLQGVGQQQ*VPLRHLHSPGVQGP Trigger: AGGGCCCTGGACCCCGGGCGAATGCAGATGCCGCAGGGGAACCCACTGCTGCTGTCCTACACCCTGCAGGAGCTGCTGGCCAAGGACACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000198945.5 |
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| CDS-3UTR CAA 90 bp | GCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCAGGTGCCGGGCCACCAGGTaGATGAAGCGCTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAHRQLRGTAAAWRESARCRATR*MKRFRA Trigger: GGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCA...CCTGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CAA 90 bp | CCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCAGGAACATGCCGGGCCACCAGGTaGATGAAGCGCTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTGSSGERLLPGGNQPGTCRATR*MKRFRA Trigger: GGCCCTGAAGCGCTTCATCAACCTGGTGGCCCGGCA...TGTTCCTGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CAA 90 bp | AGACCGCCGGCAGCCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATTCATCAGGCCGTACTaGTGCAGTGCCCGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPPAAHRQLRGTAAAWREFIRPY*CSARWC Trigger: ACACCAGCGGGCACTGCACAAGTACGGCCTGATGAA...TTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGGCTGCCGGCGGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CAA 90 bp | TGGGCCCCACTCAGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCTCATTCTCCTCCTTCTaGCCCTGCTGTGCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WAPLRPGKGTSRREIRCLSFSSF*PCCAAL Trigger: CAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAATGA...GAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCTGAGTGGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR CAA 90 bp | TGGGCCCCACTCAGGCCAGGGAAAGGGACAAGCAGGCGGGAGATCCGGTGCCTCACCTTGCTCATCTCCTaGTGCCCTTGGATCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WAPLRPGKGTSRREIRCLTLLIS*CPWIWE Trigger: CTCCCAGATCCAAGGGCACAAGGAGATGAGCAAGGT...GAGGCACCGGATCTCCCGCCTGCTTGTCCCTTTCCCTGGCCTGAGTGGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
||
| CDS-3UTR CAA 90 bp | AAGACCCTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCGCTCCCAGCACTCTCTaGGGCGGAAGAGCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: KTLSLHPLWTLTGPGPELAPSTL*GGRAGT Trigger: GGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAGC...GAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAGGGTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
||
| CDS-3UTR CAA 90 bp | CCCACAGGCAGCTCAGGGGAACGGCTGCTGCCTGGAGGGAATCAGCCAGGAACATCATTCTCCTCCTTCTaGCCCTGCTGTGCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTGSSGERLLPGGNQPGTSFSSF*PCCAAL Trigger: CAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAATGA...TGTTCCTGGCTGATTCCCTCCAGGCAGCAGCCGTTCCCCTGAGCTGCCTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS-3UTR CAA 90 bp | GCCACAGGACAGGCCAGTCCTCCCATCCCTTTGCTGCTAGGTGAACCCCTAGGCCCGGCTCATGGCAAATaGAGTCTGGATGTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATGQASPPIPLLLGEPLGPAHGK*SLDVSW Trigger: CCAGCTGACATCCAGACTCAATTTGCCATGAGCCGG...GCCTAGGGGTTCACCTAGCAGCAAAGGGATGGGAGGACTGGCCTGTCCTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
||
| CDS GCA 90 bp | CCCTGTCGGCTCCCAGCACTCTCTTGGGCGGAAGAGCTGGAACCATaGGGTACGGGAACTTGTGAAGCAGCACTTCATGGAAGACCACGA | + |
|
Preference number: 5 (lower is better) Translates to: PCRLPALSWAEELEP*GTGTCEAALHGRPR Trigger: TCGTGGTCTTCCATGAAGTGCTGCTTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAGCCGACAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000198945.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCTTCATCCACTGTGGACCTTGACAGGCCCTGGACCAGAGCTCCAAGGACTGTACACGGAGGACTaGAAGCGCTGGCTGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LSLHPLWTLTGPGPELQGLYTED*KRWLET Trigger: GGTTTCCAGCCAGCGCTTCAAGTCCTCCGTGTACAG...TCCTTGGAGCTCTGGTCCAGGGCCTGTCAAGGTCCACAGTGGATGAAGGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR CAA 90 bp | CAACAGGCCAAGGGGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGCTGTACACGGAGGACTaGAAGCGCTGGCTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: QQAKGQTGGTKTSYNKNRLYTED*KRWLET Trigger: GGTTTCCAGCCAGCGCTTCAAGTCCTCCGTGTACAG...CCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCCCCTTGGCCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR CAA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCTTCATCAGGCCGTACTaGTGCAGTGCCCGCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPFIRPY*CSARWC Trigger: ACACCAGCGGGCACTGCACAAGTACGGCCTGATGAA...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS CCA 90 bp | GATGAACTCCCTGTCGGCTCCCAGCACTCTCTTGGGCGGAAGAGCTaGAACCATGCGGTACGGGAACTTGTGAAGCAGCACTTCATGGAA | + |
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Preference number: 5 (lower is better) Translates to: DELPVGSQHSLGRKS*NHAVRELVKQHFME Trigger: TTCCATGAAGTGCTGCTTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAGCCGACAGGGAGTTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000198945.5 |
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| CDS-3UTR CAA 90 bp | AGACCTCCGCCTGGCTTCAAATGCTCCTCCCAGAATGTCTGTAGGCCCAAGGCTACCTTGCTCATCTCCTaGTGCCCTTGGATCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RPPPGFKCSSQNVCRPKATLLIS*CPWIWE Trigger: CTCCCAGATCCAAGGGCACAAGGAGATGAGCAAGGT...AGCCTTGGGCCTACAGACATTCTGGGAGGAGCATTTGAAGCCAGGCGGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CAA 90 bp | GCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCACCTTGCTCATCTCCTaGTGCCCTTGGATCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: AQRPPTTRTGRHKDRRQPTLLIS*CPWIWE Trigger: CTCCCAGATCCAAGGGCACAAGGAGATGAGCAAGGT...GGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS GCA 90 bp | TACACGGAGGACTTGAAGCGCTGGCTGGAAACCTCGTACTCCACATaGTTAAGGAAGAGGCCCTTCTTCTCAGGGATGAGCTCCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: YTEDLKRWLETSYST*LRKRPFFSGMSSTC Trigger: GCAGGTGGAGCTCATCCCTGAGAAGAAGGGCCTCTTCCTTAAGCATGTGGAGTACGAGGTTTCCAGCCAGCGCTTCAAGTCCTCCGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 ENSMUST00000198945.5 |
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| CDS-3UTR CAA 90 bp | GGCAGACTGGGGGCACAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCTGTACACGGAGGACTaGAAGCGCTGGCTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: GRLGAQRPPTTRTGRHKDLYTED*KRWLET Trigger: GGTTTCCAGCCAGCGCTTCAAGTCCTCCGTGTACAG...GTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTGTGCCCCCAGTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 |
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| CDS-3UTR CAA 90 bp | CGCCTCCTTGAGCTTGTGCTGAACATCCGAGCCACTGAAGGAGAGGAAGAGTTTCTGTACACGGAGGACTaGAAGCGCTGGCTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: RLLELVLNIRATEGEEEFLYTED*KRWLET Trigger: GGTTTCCAGCCAGCGCTTCAAGTCCTCCGTGTACAG...AAACTCTTCCTCTCCTTCAGTGGCTCGGATGTTCAGCACAAGCTCAAGGAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| CDS-3UTR CAA 90 bp | GGGAAAGACTATGTGAGAAAAGGCAGGCTCTATTGCAGGCGTGGGGGACCCAGACCGGCTCATGGCAAATaGAGTCTGGATGTCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GKDYVRKGRLYCRRGGPRPAHGK*SLDVSW Trigger: CCAGCTGACATCCAGACTCAATTTGCCATGAGCCGG...TCTGGGTCCCCCACGCCTGCAATAGAGCCTGCCTTTTCTCACATAGTCTTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 |
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| CDS-3UTR CAA 90 bp | AAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCACAGCCGGCTCATGGCAAATaGAGTCTGGATGTCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KDLLQQEQGDTKTAGSPQPAHGK*SLDVSW Trigger: CCAGCTGACATCCAGACTCAATTTGCCATGAGCCGG...CTGTGGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CAA 90 bp | CAAAGACCTCCTACAACAAGAACAGGGAGACACAAAGACCGCCGGCAGCCCACATCATTCTCCTCCTTCTaGCCCTGCTGTGCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: QRPPTTRTGRHKDRRQPTSFSSF*PCCAAL Trigger: CAGAGCTGCACAGCAGGGCAAGAAGGAGGAGAATGA...TGTGGGCTGCCGGCGGTCTTTGTGTCTCCCTGTTCTTGTTGTAGGAGGTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS-3UTR CAA 90 bp | TGTTTGAAAAGAGGTTTTAGTGAGGCCACCGGGAGCTCTGTCGTGGGTCTTGCCTTCATCAGGCCGTACTaGTGCAGTGCCCGCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: CLKRGFSEATGSSVVGLAFIRPY*CSARWC Trigger: ACACCAGCGGGCACTGCACAAGTACGGCCTGATGAA...GGCAAGACCCACGACAGAGCTCCCGGTGGCCTCACTAAAACCTCTTTTCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 |
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| CDS GCA 72 bp | CTCCTCGTCAGCCTCCGCCTCAGCAGCTGCAGCGACTaGCGGCGAGGGCAGCGGGTCCATCGCGCGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLVSLRLSSCSD*RRGQRVHRAAS Trigger: ACTGGCCGCGCGATGGACCCGCTGCCCTCGCCGGCAGTCGCTGCAGCTGCTGAGGCGGAGGCTGACGAGGAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031539.12 |
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| CDS GCA 72 bp | CGGATCCGCCTCCTCGTCAGCCTCCGCCTCAGCAGCTaGAGCGACTGCCGGCGAGGGCAGCGGGTCCATCGC | + |
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Preference number: 6 (lower is better) Translates to: RIRLLVSLRLSS*SDCRRGQRVHR Trigger: GCGATGGACCCGCTGCCCTCGCCGGCAGTCGCTGCAGCTGCTGAGGCGGAGGCTGACGAGGAGGCGGATCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031539.12 |
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| CDS CAA 72 bp | CCCTCGATGAACTCCCTGTCGGCTCCCAGCACTCTCTaGGGCGGAAGAGCTGGAACCATGCGGTACGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PSMNSLSAPSTL*GGRAGTMRYGN Trigger: GTTCCCGTACCGCATGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAGCCGACAGGGAGTTCATCGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000198945.5 |
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| CDS CCA 72 bp | CCTGTCGGCTCCCAGCACTCTCTTGGGCGGAAGAGCTaGAACCATGCGGTACGGGAACTTGTGAAGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PVGSQHSLGRKS*NHAVRELVKQH Trigger: GTGCTGCTTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAGCCGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000198945.5 |
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| CDS CCA 72 bp | CTAAGAGGCTCCCAGCACTCTCTTGGGCGGAAGAGCTaGAACCATGCGGTACGGGAACTTGTGAAGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LRGSQHSLGRKS*NHAVRELVKQH Trigger: GTGCTGCTTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAGCCTCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197880.5 |
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| CDS GCA 72 bp | CTCCCAGCACTCTCTTGGGCGGAAGAGCTGGAACCATaGGGTACGGGAACTTGTGAAGCAGCACTTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: LPALSWAEELEP*GTGTCEAALHG Trigger: TCCATGAAGTGCTGCTTCACAAGTTCCCGTACCGCATGGTTCCAGCTCTTCCGCCCAAGAGAGTGCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 ENSMUST00000198945.5 |
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| CDS GCA 72 bp | GACTTGAAGCGCTGGCTGGAAACCTCGTACTCCACATaGTTAAGGAAGAGGCCCTTCTTCTCAGGGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: DLKRWLETSYST*LRKRPFFSGMS Trigger: GCTCATCCCTGAGAAGAAGGGCCTCTTCCTTAAGCATGTGGAGTACGAGGTTTCCAGCCAGCGCTTCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031539.12 ENSMUST00000196130.5 ENSMUST00000196566.5 ENSMUST00000197880.5 ENSMUST00000198945.5 |
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