Pregenerated sensors for SNX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005656Ensembl transcript IDs: ENSMUST00000005798.9, ENSMUST00000218934.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGGTaGGCCCTGCTGCTCCACTGTCTCTCAGAAGAAGAGCTGATGCAC | + |
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Preference number: 1 (lower is better) Translates to: LEGGVRGGRPLPCSR*ALLLHCLSEEELMH Trigger: GTGCATCAGCTCTTCTTCTGAGAGACAGTGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR GCA 90 bp | GAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTaGCCTGCAGCCGGTGAGCCCTGCTGCTCCACTGTCTCTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: ELWASWKVECEVAGR*PAAGEPCCSTVSQK Trigger: CTTCTGAGAGACAGTGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR CCA 90 bp | AACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGAACTTTaGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: NTVRQASQRKERVEL*ASWKVECEVAGRCP Trigger: AGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR CCA 90 bp | AGATTTATTATCGCTACCCTGAATTCCAGAGCCATACAAGGAGCATaGAGTCAAAACGCCACTGCTGTCTCTGGGCGTTTACAATATTGG | + |
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Preference number: 1 (lower is better) Translates to: RFIIATLNSRAIQGA*SQNATAVSGRLQYW Trigger: CCAATATTGTAAACGCCCAGAGACAGCAGTGGCGTTTTGACTCCATGCTCCTTGTATGGCTCTGGAATTCAGGGTAGCGATAATAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGTCTCAGAAGAAGAGCTaGTGCACTGTGCCCGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FGLLGRWSARWQAAALQPSQKKS*CTVPAV Trigger: GACAGCGGGCACAGTGCATCAGCTCTTCTTCTGAGA...CGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGGTAGAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCGCCGGTGAGCCCTGCTaGTCCACTGTCTCTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ERVELWASWKVECEVAGRAGEPC*STVSQK Trigger: CTTCTGAGAGACAGTGGAGCAGCAGGGCTCACCGGC...GCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGGTGAGCCCTGCTGCTCCACTGAAAACAAACTGGATTTaGAGGCAGCCCTTTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: SARWQAAALQPVSPAAPLKTNWI*RQPFLT Trigger: TGTCAAAAAGGGCTGCCTTCAAATCCAGTTTGTTTT...CAGTGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTCGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR CAA 90 bp | CTGTCTCTCAGAAGAAGAGCTGATGCACTGTGCCCGCTGTCTCTGTaGTTCCCAGTGAGCTTAGATGCCGGAGGGAGGTCGTCAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LSLRRRADALCPLSL*FPVSLDAGGRSSGK Trigger: TTTTCCTGACGACCTCCCTCCGGCATCTAAGCTCACTGGGAACAACAGAGACAGCGGGCACAGTGCATCAGCTCTTCTTCTGAGAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR CAA 90 bp | AAACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGAACTTaGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: KHSKTGFSKKREGRT*GFLEGGVRGGRPLP Trigger: GGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATAAACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGAACTTTGGTCTTGGAAGGTGGAGTaGGAGGTGGCAGGCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: EINTVRQASQRKERVELWSWKVE*EVAGRC Trigger: GCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGA...CCAAAGTTCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTTTATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCATACAAGGAGCATGGAGTCAAAACGCCACTGCTGTCTCTGGGCGTTTAAAAACAAACTGGATTTaGAGGCAGCCCTTTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: RAIQGAWSQNATAVSGRLKTNWI*RQPFLT Trigger: TGTCAAAAAGGGCTGCCTTCAAATCCAGTTTGTTTT...TAAACGCCCAGAGACAGCAGTGGCGTTTTGACTCCATGCTCCTTGTATGGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| 3UTR GCA 72 bp | GCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTaGCCTGCAGCCGGTGAGCCCTGCTGCTCCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: ASWKVECEVAGR*PAAGEPCCSTV Trigger: GACAGTGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR TCA 72 bp | GGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGGTaGGCCCTGCTGCTCCACTGTCTCTCAGAAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: GVRGGRPLPCSR*ALLLHCLSEEE Trigger: CTCTTCTTCTGAGAGACAGTGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR TCA 72 bp | GAGCCCTGCTGCTCCACTGTCTCTCAGAAGAAGAGCTaGTGCACTGTGCCCGCTGTCTCTGTTGTTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: EPCCSTVSQKKS*CTVPAVSVVPS Trigger: ACTGGGAACAACAGAGACAGCGGGCACAGTGCATCAGCTCTTCTTCTGAGAGACAGTGGAGCAGCAGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR GCA 72 bp | GCTCCACTGTCTCTCAGAAGAAGAGCTGATGCACTGTaGCCGCTGTCTCTGTTGTTCCCAGTGAGCTTAGAT | + |
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Preference number: 3 (lower is better) Translates to: APLSLRRRADAL*PLSLLFPVSLD Trigger: ATCTAAGCTCACTGGGAACAACAGAGACAGCGGGCACAGTGCATCAGCTCTTCTTCTGAGAGACAGTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR CCA 72 bp | ATCGCTACCCTGAATTCCAGAGCCATACAAGGAGCATaGAGTCAAAACGCCACTGCTGTCTCTGGGCGTTTA | + |
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Preference number: 3 (lower is better) Translates to: IATLNSRAIQGA*SQNATAVSGRL Trigger: TAAACGCCCAGAGACAGCAGTGGCGTTTTGACTCCATGCTCCTTGTATGGCTCTGGAATTCAGGGTAGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| 3UTR-3UTR CAA 90 bp | TACATAAAGTCTGACCCGAAACTTCTACGTTCATTAATTCAAAGTAAGTCTCGTAGAGAGGGTAGAACTTaGGGCTTCTTGGAAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: YIKSDPKLLRSLIQSKSRREGRT*GFLEGG Trigger: TCCACCTTCCAAGAAGCCCAAAGTTCTACCCTCTCT...ACGAGACTTACTTTGAATTAATGAACGTAGAAGTTTCGGGTCAGACTTTATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR GCA 90 bp | AGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGGTGAGCCCTGCTGCTCCACTGAGGTTGCCCTTTGCATaGTTCAGTTCTAGTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SARWQAAALQPVSPAAPLRLPFA*FSSSSA Trigger: TGCAGAACTAGAACTGAAGCATGCAAAGGGCAACCT...CAGTGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTCGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR TCA 90 bp | GAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAATAGGTCAGAGAGCTTaGGGTCCTCGTCAGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: ELWASWKVECEVAGRCPAIGQRA*GPRQQT Trigger: TGTCTGCTGACGAGGACCTCAAGCTCTCTGACCTAT...TGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR TCA 90 bp | AGGGTAGAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCATAGGTCAGAGAGCTTaGGGTCCTCGTCAGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: RVELWASWKVECEVAGRCIGQRA*GPRQQT Trigger: TGTCTGCTGACGAGGACCTCAAGCTCTCTGACCTAT...GCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCCGCTGCCCTGCAGCCGGTGAGCCCTGCTGCTCCACTGTCTCTCTTAAAATTTGGCAATaGACTCTTTGTGTGAACGGT | + |
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Preference number: 4 (lower is better) Translates to: EVAGRCPAAGEPCCSTVSLKIWQ*TLCVNG Trigger: ACCGTTCACACAAAGAGTTCATTGCCAAATTTTAAG...AGAGACAGTGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGGTAGAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCCAAAATAGGATGCGCTaGAACCCGACACAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: ERVELWASWKVECEVAGRQNRMR*NPTQEH Trigger: GTGTTCCTGTGTCGGGTTGCAGCGCATCCTATTTTG...GCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | GAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCATTTCTCAAAATAGGATaGGCTGCAACCCGACACAGG | + |
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Preference number: 4 (lower is better) Translates to: ELWASWKVECEVAGRCPAFLKIG*AATRHR Trigger: CCTGTGTCGGGTTGCAGCGCATCCTATTTTGAGAAA...TGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR CAA 72 bp | AGAAGAAGAGCTGATGCACTGTGCCCGCTGTCTCTGTaGTTCCCAGTGAGCTTAGATGCCGGAGGGAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: RRRADALCPLSL*FPVSLDAGGRS Trigger: CGACCTCCCTCCGGCATCTAAGCTCACTGGGAACAACAGAGACAGCGGGCACAGTGCATCAGCTCTTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR TCA 90 bp | AGAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCTTGCAACTGTCTTCTTaGAGATCGCCAGGTATTCAG | + |
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Preference number: 4 (lower is better) Translates to: RTLGFLEGGVRGGRPLPCLQLSS*RSPGIQ Trigger: CTGAATACCTGGCGATCTTCAAGAAGACAGTTGCAA...GCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | TTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGGAACACCTCATGCATTaGAACTGTCTTCTTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FGLLGRWSARWQAAALQPEHLMH*NCLLED Trigger: ATCTTCAAGAAGACAGTTGCAATGCATGAGGTGTTC...CGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | AGAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAGGTTGCCCTTTGCATaGTTCAGTTCTAGTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RTLGFLEGGVRGGRPLPCRLPFA*FSSSSA Trigger: TGCAGAACTAGAACTGAAGCATGCAAAGGGCAACCT...GCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | TTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGTTTGTTTTTCGCTCTTaGCTTGTCCAGTGCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: FGLLGRWSARWQAAALQPFVFRS*LVQCFI Trigger: AATAAAGCACTGGACAAGGCAAGAGCGAAAAACAAA...CGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR CCA 90 bp | AGGGTAGAACTTTGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGGCCGCTGCAAAATCAGGTCTTGGTaGTGCTGGTGGGATAATGTA | + |
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Preference number: 4 (lower is better) Translates to: RVELWASWKVECEVAGRCKIRSW*CWWDNV Trigger: TACATTATCCCACCAGCACCACCAAGACCTGATTTT...GCAGCGGCCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR GCA 90 bp | GATGCCGGAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTTCTGAAATGTCCACCTaGAGAGCAGCGTCACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DAGGRSSGKQTGFEGSPFSEMST*RAASLW Trigger: CCAGAGTGACGCTGCTCTGCAGGTGGACATTTCAGA...AAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTCCGGCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR GCA 90 bp | CCGGTGAGCCCTGCTGCTCCACTGTCTCTCAGAAGAAGAGCTGATGCACTGTGCAGGAATGTTCGTTCGTaGTCAAAGAAGTCGTCTACA | + |
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Preference number: 4 (lower is better) Translates to: PVSPAAPLSLRRRADALCRNVRS*SKKSST Trigger: TGTAGACGACTTCTTTGAGCACGAACGAACATTCCT...GCACAGTGCATCAGCTCTTCTTCTGAGAGACAGTGGAGCAGCAGGGCTCACCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | CCACTGTCTCTCAGAAGAAGAGCTGATGCACTGTGCCCGCTGTCTCTGTTGTTCGAAGGAGCTGAAGGTTaGCCTTTGCATGCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: PLSLRRRADALCPLSLLFEGAEG*PLHASV Trigger: AACTGAAGCATGCAAAGGGCAACCTTCAGCTCCTTC...GAACAACAGAGACAGCGGGCACAGTGCATCAGCTCTTCTTCTGAGAGACAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| 3UTR CAA 72 bp | AAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGAACTTaGGGCTTCTTGGAAGGTGGAGTGCGAGGTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KTGFSKKREGRT*GFLEGGVRGGR Trigger: CCTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR TCA 90 bp | CCACTGTCTCTCAGAAGAAGAGCTGATGCACTGTGCCCGCTGTCTCTGTTGTTCTTGCAACTGTCTTCTTaGAGATCGCCAGGTATTCAG | + |
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Preference number: 4 (lower is better) Translates to: PLSLRRRADALCPLSLLFLQLSS*RSPGIQ Trigger: CTGAATACCTGGCGATCTTCAAGAAGACAGTTGCAA...GAACAACAGAGACAGCGGGCACAGTGCATCAGCTCTTCTTCTGAGAGACAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | GATGCCGGAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTATCAGGTCTTGGTGGTaGTGGTGGGATAATGTAACC | + |
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Preference number: 4 (lower is better) Translates to: DAGGRSSGKQTGFEGSPFIRSWW*WWDNVT Trigger: GGTTACATTATCCCACCAGCACCACCAAGACCTGAT...AAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTCCGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTTGACAGACAAAATAGGATGCGCTaGAACCCGACACAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: EGGRQENKLDLKAALFDRQNRMR*NPTQEH Trigger: GTGTTCCTGTGTCGGGTTGCAGCGCATCCTATTTTG...TCTGTCAAAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | ATGCCGGAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTTGTCCGACTTAGCAGATaGATCCTTAACTCGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: MPEGGRQENKLDLKAALFVRLSR*ILNSVV Trigger: CACAACCGAGTTAAGGATGCATCTGCTAAGTCGGAC...AAAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTCCGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | ATGCCGGAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTTGAGATCTACATTTATTaGTTTAAGTCCGCGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MPEGGRQENKLDLKAALFEIYIY*FKSAVF Trigger: GAAGACCGCGGACTTAAAGCAATAAATGTAGATCTC...AAAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTCCGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR TCA 90 bp | TACATAAAGTCTGACCCGAAACTTCTACGTTCATTAATTCAAAGTAAGTCTCGTCTCACTGAGCGCGTCTaGAATGTCCACCTGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YIKSDPKLLRSLIQSKSRLTERV*NVHLQS Trigger: GCTCTGCAGGTGGACATTTCAGACGCGCTCAGTGAG...ACGAGACTTACTTTGAATTAATGAACGTAGAAGTTTCGGGTCAGACTTTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR TCA 90 bp | CATACAAGGAGCATGGAGTCAAAACGCCACTGCTGTCTCTGGGCGTTTACAATATCCTTAACTCGGTTGTaGTACTCTAAAAGGAATGTT | + |
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Preference number: 4 (lower is better) Translates to: HTRSMESKRHCCLWAFTISLTRL*YSKRNV Trigger: AACATTCCTTTTAGAGTATCACAACCGAGTTAAGGA...TATTGTAAACGCCCAGAGACAGCAGTGGCGTTTTGACTCCATGCTCCTTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTTGACAGATTTGTTTTTCGCTCTTaGCTTGTCCAGTGCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: EGGRQENKLDLKAALFDRFVFRS*LVQCFI Trigger: AATAAAGCACTGGACAAGGCAAGAGCGAAAAACAAA...TCTGTCAAAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | CACATAGGAAATAAACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGATTTCTCAAAATAGGATaGGCTGCAACCCGACACAGG | + |
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Preference number: 4 (lower is better) Translates to: HIGNKHSKTGFSKKREGRFLKIG*AATRHR Trigger: CCTGTGTCGGGTTGCAGCGCATCCTATTTTGAGAAA...TCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTTTATTTCCTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | CACATAGGAAATAAACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGAGTCCGACTTAGCAGATaGATCCTTAACTCGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: HIGNKHSKTGFSKKREGRVRLSR*ILNSVV Trigger: CACAACCGAGTTAAGGATGCATCTGCTAAGTCGGAC...TCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTTTATTTCCTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR GCA 90 bp | TACATAAAGTCTGACCCGAAACTTCTACGTTCATTAATTCAAAGTAAGTCTCGTGAAGGAGCTGAAGGTTaGCCTTTGCATGCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: YIKSDPKLLRSLIQSKSREGAEG*PLHASV Trigger: AACTGAAGCATGCAAAGGGCAACCTTCAGCTCCTTC...ACGAGACTTACTTTGAATTAATGAACGTAGAAGTTTCGGGTCAGACTTTATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005798.9 |
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| CDS-3UTR GCA 90 bp | CACATAGGAAATAAACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGAGAACACCTCATGCATTaGAACTGTCTTCTTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: HIGNKHSKTGFSKKREGREHLMH*NCLLED Trigger: ATCTTCAAGAAGACAGTTGCAATGCATGAGGTGTTC...TCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTTTATTTCCTATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTGCGAGGTGGCAGGCCGCTGCCCTGCAGCCGGTGAGCCCTGCTGCTCCAGCTGAAGGTTGCCCTTaGCATGCTTCAGTTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: WSARWQAAALQPVSPAAPAEGCP*HASVLV Trigger: AACTAGAACTGAAGCATGCAAAGGGCAACCTTCAGC...TGGAGCAGCAGGGCTCACCGGCTGCAGGGCAGCGGCCTGCCACCTCGCACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR CAA 90 bp | GAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTTGACAGAGAGGTCCTTAGCTGCTaGAGACTCCCGCAAGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: EGGRQENKLDLKAALFDREVLSC*RLPQVV Trigger: TACTACTTGCGGGAGTCTCAAGCAGCTAAGGACCTC...TCTGTCAAAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR CAA 90 bp | GATGCCGGAGGGAGGTCGTCAGGAAAACAAACTGGATTTGAAGGCAGCCCTTTTCTTTGTTTTTCGCTCTaGCCTTGTCCAGTGCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: DAGGRSSGKQTGFEGSPFLCFSL*PCPVLY Trigger: ATAAAGCACTGGACAAGGCAAGAGCGAAAAACAAAG...AAAAGGGCTGCCTTCAAATCCAGTTTGTTTTCCTGACGACCTCCCTCCGGCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR CAA 90 bp | GAAATAAACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGAACTTTGGGAGGTCCTTAGCTGCTaGAGACTCCCGCAAGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: EINTVRQASQRKERVELWEVLSC*RLPQVV Trigger: TACTACTTGCGGGAGTCTCAAGCAGCTAAGGACCTC...CCAAAGTTCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTTTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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| CDS-3UTR CAA 90 bp | CACATAGGAAATAAACACAGTAAGACAGGCTTCTCAAAGAAAAGAGAGGGTAGACTTTGTTTTTCGCTCTaGCCTTGTCCAGTGCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: HIGNKHSKTGFSKKREGRLCFSL*PCPVLY Trigger: ATAAAGCACTGGACAAGGCAAGAGCGAAAAACAAAG...TCTACCCTCTCTTTTCTTTGAGAAGCCTGTCTTACTGTGTTTATTTCCTATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005798.9 ENSMUST00000218934.2 |
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