Pregenerated sensors for SNX31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013611Ensembl transcript IDs: ENSMUST00000013755.12, ENSMUST00000161202.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGTGTGGGTGCCAGAGGAGGCCAGAAGAGGGCACTGGGTCCTCTaGAGCTGGAGTTACAGCTGGTTGTTAAGTACCATGTGGGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: YVWVPEEARRGHWVL*SWSYSWLLSTMWVK Trigger: CTTAACCCACATGGTACTTAACAACCAGCTGTAACTCCAGCTCCAGAGGACCCAGTGCCCTCTTCTGGCCTCCTCTGGCACCCACACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR CCA 90 bp | TATTATGTGTATGTGTGGGTGCCAGAGGAGGCCAGAAGAGGGCACTaGGTCCTCTGGAGCTGGAGTTACAGCTGGTTGTTAAGTACCATG | + |
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Preference number: 1 (lower is better) Translates to: YYVYVWVPEEARRGH*VLWSWSYSWLLSTM Trigger: CATGGTACTTAACAACCAGCTGTAACTCCAGCTCCAGAGGACCCAGTGCCCTCTTCTGGCCTCCTCTGGCACCCACACATACACATAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR TCA 90 bp | CTACACCATGTTAGCCCTGAGAGTTATGGAGTGCTGAAGTTAGACTaGTCAGCACAGGAGACTGCAATGTCAAAGAAAGAGAGAAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LHHVSPESYGVLKLD*SAQETAMSKKERSG Trigger: TCCACTTCTCTCTTTCTTTGACATTGCAGTCTCCTGTGCTGATCAGTCTAACTTCAGCACTCCATAACTCTCAGGGCTAACATGGTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR GCA 90 bp | TGGTGCCAAACATATTCCTATAATTTAGAACAAGCTTTTTATCCCTaGAATACGAGAACATACAAAGGGCTTCATGGAGCCAGGTACATC | + |
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Preference number: 1 (lower is better) Translates to: WCQTYSYNLEQAFYP*NTRTYKGLHGARYI Trigger: GATGTACCTGGCTCCATGAAGCCCTTTGTATGTTCTCGTATTGCAGGGATAAAAAGCTTGTTCTAAATTATAGGAATATGTTTGGCACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR GCA 90 bp | AGGTCAAAGAAGCCATACTTTCCCAATCTGGTGAATCTACTTTGGTaGCAAACATATTCCTATAATTTAGAACAAGCTTTTTATCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RSKKPYFPNLVNLLW*QTYSYNLEQAFYPC Trigger: GCAGGGATAAAAAGCTTGTTCTAAATTATAGGAATATGTTTGGCACCAAAGTAGATTCACCAGATTGGGAAAGTATGGCTTCTTTGACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR CCA 90 bp | GATAGGTCAAAGAAGCCATACTTTCCCAATCTGGTGAATCTACTTTaGTGCCAAACATATTCCTATAATTTAGAACAAGCTTTTTATCCC | + |
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Preference number: 1 (lower is better) Translates to: DRSKKPYFPNLVNLL*CQTYSYNLEQAFYP Trigger: GGGATAAAAAGCTTGTTCTAAATTATAGGAATATGTTTGGCACCAAAGTAGATTCACCAGATTGGGAAAGTATGGCTTCTTTGACCTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATAGAGAAGTGGATAAATaGCTGGATGGTGGGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHREVDK*LDGGKP Trigger: GGGCTTCCCACCATCCAGGCATTTATCCACTTCTCT...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTTTGAACCTGCCCACCTaGCACTTAAGTCAGCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFLNLPT*HLSQLY Trigger: ATAGAGCTGACTTAAGTGGCAGGTGGGCAGGTTCAA...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGTGCTGAAGTTAGACTaGTCAGCACAGGAGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPVLKLD*SAQETA Trigger: TGCAGTCTCCTGTGCTGATCAGTCTAACTTCAGCAC...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAAGAGAAGTGGATAAATaGCTGGATGGTGGGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPREVDK*LDGGKP Trigger: GGGCTTCCCACCATCCAGGCATTTATCCACTTCTCT...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGATCAGCACAGGAGACTaGAATGTCAAAGAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLIVEQNHTVRDAGQGSPISTGD*NVKERE Trigger: CTCTCTTTCTTTGACATTGCAGTCTCCTGTGCTGAT...CGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTCAAGCTTTTTATCCCTaGAATACGAGAACATACAAA | + |
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Preference number: 2 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFQAFYP*NTRTYK Trigger: TTTGTATGTTCTCGTATTGCAGGGATAAAAAGCTTG...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGACGCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGCTCCTTTTGCTCTCTaGATAGGTCAAAGAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GDASILTWVTQISLQRSYAPFAL*IGQRSH Trigger: ATGGCTTCTTTGACCTATCCAGAGAGCAAAAGGAGC...GTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGCGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
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| 3UTR-3UTR TCA 90 bp | AGAACAAACCTCCCATTGGTTGATTTGAACCTGCCCACCTGCCACTTAAGTCAGGTGCTGAAGTTAGACTaGTCAGCACAGGAGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: RTNLPLVDLNLPTCHLSQVLKLD*SAQETA Trigger: TGCAGTCTCCTGTGCTGATCAGTCTAACTTCAGCAC...CTGACTTAAGTGGCAGGTGGGCAGGTTCAAATCAACCAATGGGAGGTTTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCGGGAATTTAGTCCTCTaGAAAAGTAGCAAGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: ASILTWVTQISLQRSYDSGNLVL*KSSKCS Trigger: AGAGCACTTGCTACTTTTGCAGAGGACTAAATTCCC...GCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCAAAGAAAGAGAGAAGTaGATAAATGCCTGGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPKEREK*INAWMV Trigger: CACCATCCAGGCATTTATCCACTTCTCTCTTTCTTT...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGCTGGTGAATCTACTTTaGTGCCAAACATATTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: LLIVEQNHTVRDAGQGSPLVNLL*CQTYSY Trigger: ATAGGAATATGTTTGGCACCAAAGTAGATTCACCAG...CGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAATCAGCACAGGAGACTaGAATGTCAAAGAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPISTGD*NVKERE Trigger: CTCTCTTTCTTTGACATTGCAGTCTCCTGTGCTGAT...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGACGCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACAAAGAAAGAGAGAAGTaGATAAATGCCTGGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: GDASILTWVTQISLQRSYKEREK*INAWMV Trigger: CACCATCCAGGCATTTATCCACTTCTCTCTTTCTTT...GTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGCGTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGCTCTTAACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAATTTTAGCTCCTTTTaGTCTCTGGATAGGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QVLLTTEPFLQPRAQSSNNFSSF*SLDRSK Trigger: CTTTGACCTATCCAGAGAGCAAAAGGAGCTAAAATT...ATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGTTAAGAGCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATAATTTTAGCTCCTTTTaGTCTCTGGATAGGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSRFSSPEPSLLIVEQNHNFSSF*SLDRSK Trigger: CTTTGACCTATCCAGAGAGCAAAAGGAGCTAAAATT...ATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCACTGGTGAATCTACTTTaGTGCCAAACATATTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPLVNLL*CQTYSY Trigger: ATAGGAATATGTTTGGCACCAAAGTAGATTCACCAG...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCCTAAAACTCAAACAAGCTTTTTATCCCTaGAATACGAGAACATACAAA | + |
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Preference number: 2 (lower is better) Translates to: TWVTQISLQRSYDSLKLKQAFYP*NTRTYK Trigger: TTTGTATGTTCTCGTATTGCAGGGATAAAAAGCTTG...TTTGAGTTTTAGGCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
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| 3UTR CCA 72 bp | TGGATGGTGGGAAGCCCACCTCCCACACCCACGCGCTaGCACTGTCTTAAGACAGCCGTAGAGATGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: WMVGSPPPTPTR*HCLKTAVEMRF Trigger: GAATCTCATCTCTACGGCTGTCTTAAGACAGTGCCAGCGCGTGGGTGTGGGAGGTGGGCTTCCCACCATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR GCA 72 bp | CAGAGTCTGGGTTCCTGCTGTCTGAGACGGCCCCTGTaGTGTGCTATCAGGGTTAGATGGACCCTCACTAGT | + |
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Preference number: 3 (lower is better) Translates to: QSLGSCCLRRPL*CAIRVRWTLTS Trigger: ACTAGTGAGGGTCCATCTAACCCTGATAGCACAGCACAGGGGCCGTCTCAGACAGCAGGAACCCAGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
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| 3UTR CCA 72 bp | GTGCCAGAGGAGGCCAGAAGAGGGCACTGGGTCCTCTaGAGCTGGAGTTACAGCTGGTTGTTAAGTACCATG | + |
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Preference number: 3 (lower is better) Translates to: VPEEARRGHWVL*SWSYSWLLSTM Trigger: CATGGTACTTAACAACCAGCTGTAACTCCAGCTCCAGAGGACCCAGTGCCCTCTTCTGGCCTCCTCTGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATAGAACAAACCTCCCATaGGTTGATTTGAACCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHRTNLP*VDLNLP Trigger: GGGCAGGTTCAAATCAACCAATGGGAGGTTTGTTCT...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR GCA 72 bp | TTCAACCTTCTGATCTCAATACAGAGTCTGGGTTCCTaGTGTCTGAGACGGCCCCTGTGCTGTGCTATCAGG | + |
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Preference number: 3 (lower is better) Translates to: FNLLISIQSLGS*CLRRPLCCAIR Trigger: CCTGATAGCACAGCACAGGGGCCGTCTCAGACAGCAGGAACCCAGACTCTGTATTGAGATCAGAAGGTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
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| 3UTR-3UTR CAA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTTCTGGTGAATCTACTTaGGTGCCAAACATATTCCTA | + |
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Preference number: 3 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFSGEST*VPNIFL Trigger: TAGGAATATGTTTGGCACCAAAGTAGATTCACCAGA...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR CCA 72 bp | TCCATTAACTCTGATGGTGACGCCAGCATACTGACCTaGGTGACACAGATATCTCTGCAGAGATCCTACGAC | + |
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Preference number: 3 (lower is better) Translates to: SINSDGDASILT*VTQISLQRSYD Trigger: GTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGCGTCACCATCAGAGTTAATGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCTCTGGTGAATCTACTTaGGTGCCAAACATATTCCTA | + |
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Preference number: 3 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPSGEST*VPNIFL Trigger: TAGGAATATGTTTGGCACCAAAGTAGATTCACCAGA...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| 3UTR GCA 72 bp | ACAAACCTCCCATTGGTTGATTTGAACCTGCCCACCTaGCACTTAAGTCAGCTCTATAGCGTTGGTTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: TNLPLVDLNLPT*HLSQLYSVGSY Trigger: GTAGGAACCAACGCTATAGAGCTGACTTAAGTGGCAGGTGGGCAGGTTCAAATCAACCAATGGGAGGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR GCA 90 bp | AGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGAGCGCGTCTGGCCGCTaGTGGGACACCGGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SGTEPYSEGRRPGQPGTLSASGR*WDTGMQ Trigger: CTGCATCCCGGTGTCCCAGCAGCGGCCAGACGCGCT...CAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR GCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCAGGTTCCGGGTGGTTaGAGGTGCAGGGATCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHQVPGG*RCRDPA Trigger: AGCTGGATCCCTGCACCTGCAACCACCCGGAACCTG...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR TCA 90 bp | AGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGGCTCTAGGTTCTGGTTaGGAGTTCGCTGGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SGTEPYSEGRRPGQPGTLALGSG*EFAGAH Trigger: ATGGGCCCCAGCGAACTCTCAACCAGAACCTAGAGC...CAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR GCA 90 bp | AGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGCCGGGTGGTTGCAGGTaGAGGGATCCAGCTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: SGTEPYSEGRRPGQPGTLPGGCR*RDPAEH Trigger: ATGTTCAGCTGGATCCCTGCACCTGCAACCACCCGG...CAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR GCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCCGGGTGGTTGCAGGTaGAGGGATCCAGCTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHPGGCR*RDPAEH Trigger: ATGTTCAGCTGGATCCCTGCACCTGCAACCACCCGG...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR GCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATTCACCACAGAGAGCTTaGCCTCCGGGAAACACTGGA | + |
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Preference number: 4 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHSPQRA*PPGNTG Trigger: TCCAGTGTTTCCCGGAGGGCAAGCTCTCTGTGGTGA...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR CCA 90 bp | AGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGCAATCCGAGTTTGTaGGCCATCACCTCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: SGTEPYSEGRRPGQPGTLCNPSL*AITSRT Trigger: GGTCCTGGAGGTGATGGCCCACAAACTCGGATTGCA...CAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR CCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCTCAGCTCTAGGTTCTaGTTGAGAGTTCGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHLSSRF*LRVRWG Trigger: GCCCCAGCGAACTCTCAACCAGAACCTAGAGCTGAG...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR CCA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTCTCAGCTCTAGGTTCTaGTTGAGAGTTCGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFLSSRF*LRVRWG Trigger: GCCCCAGCGAACTCTCAACCAGAACCTAGAGCTGAG...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGCTCTTAACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATGCGTCTGGCCGCTGCTaGGACACCGGGATGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QVLLTTEPFLQPRAQSSNASGRC*DTGMQK Trigger: CTTCTGCATCCCGGTGTCCCAGCAGCGGCCAGACGC...ATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGTTAAGAGCACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR CCA 90 bp | CTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGTGGTTGAGAGTTCGCTaGGGCCCATCGGTATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLIVEQNHTVRDAGQGSPWLRVR*GPSVSS Trigger: GCTGGATACCGATGGGCCCCAGCGAACTCTCAACCA...CGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR TCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGCTCTAGGTTCTGGTTaGGAGTTCGCTGGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPALGSG*EFAGAH Trigger: ATGGGCCCCAGCGAACTCTCAACCAGAACCTAGAGC...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS-3UTR GCA 90 bp | GGTGACGCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACCAGGTTCCGGGTGGTTaGAGGTGCAGGGATCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDASILTWVTQISLQRSYQVPGG*RCRDPA Trigger: AGCTGGATCCCTGCACCTGCAACCACCCGGAACCTG...GTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGCGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR GCA 90 bp | AGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGCATCTCTGGGCTCTaGTCAGTGAGCTTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SGTEPYSEGRRPGQPGTLCISGL*SVSFVI Trigger: GATGACAAAGCTCACTGAGCAGAGCCCAGAGATGCA...CAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCTTGCCAGGTAGTACTTaGGTGGGAAAGGGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPLPGST*VGKGAG Trigger: GCCTGCCCCCTTTCCCACCCAAGTACTACCTGGCAA...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGTGCAATCCGAGTTTGTaGGCCATCACCTCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLIVEQNHTVRDAGQGSPCNPSL*AITSRT Trigger: GGTCCTGGAGGTGATGGCCCACAAACTCGGATTGCA...CGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | AACCTTCTGATCTCAATACAGAGTCTGGGTTCCTGCTGTCTGAGACGGCCCCTGTTGCCGATGGAAAGCTaGGCCCCACAGCCAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLLISIQSLGSCCLRRPLLPMES*APQPGS Trigger: GGAACCTGGCTGTGGGGCCCAGCTTTCCATCGGCAA...CAGGGGCCGTCTCAGACAGCAGGAACCCAGACTCTGTATTGAGATCAGAAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR TCA 90 bp | CTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGAGTTCCAAGGAAAGTaGCCTGCCAGCACTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLIVEQNHTVRDAGQGSPEFQGK*PASTSL Trigger: GAGTGAAGTGCTGGCAGGTCACTTTCCTTGGAACTC...CGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCCTAAAACTCAAAAGCGCGTCTGGCCGCTaGTGGGACACCGGGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TWVTQISLQRSYDSLKLKSASGR*WDTGMQ Trigger: CTGCATCCCGGTGTCCCAGCAGCGGCCAGACGCGCT...TTTGAGTTTTAGGCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR GCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATTTCAATGTCCTGCACTaGCTGCATGTACAGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHFNVLH*LHVQQV Trigger: GACTTGCTGTACATGCAGGCAGTGCAGGACATTGAA...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATGCCAGCACTTCACTCTaGTCATCTGGAAAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHASTSL*SSGKQC Trigger: ACATTGCTTTCCAGATGAGCAGAGTGAAGTGCTGGC...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTGCCAGCACTTCACTCTaGTCATCTGGAAAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFASTSL*SSGKQC Trigger: ACATTGCTTTCCAGATGAGCAGAGTGAAGTGCTGGC...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCTAGGTTGGCTCGGGTaGTTTTTACTTCTGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHLGWLG*FLLLPC Trigger: ACAAGGCAGAAGTAAAAAGCACCCGAGCCAACCTAG...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAAACCTCCCATTGGTTGATTTGAACCTGCCCACCTGCCACTTAAGTCAGGCGTCTGGCCGCTGCTaGGACACCGGGATGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTNLPLVDLNLPTCHLSQASGRC*DTGMQK Trigger: CTTCTGCATCCCGGTGTCCCAGCAGCGGCCAGACGC...CTGACTTAAGTGGCAGGTGGGCAGGTTCAAATCAACCAATGGGAGGTTTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCCAGGTAGTACTTGGGTaGGAAAGGGGGCAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPQVVLG*ERGQAV Trigger: AACTGCCTGCCCCCTTTCCCACCCAAGTACTACCTG...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAATTGCCGATGGAAAGCTaGGCCCCACAGCCAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTEPFLQPRAQSSNSGTELPMES*APQPGS Trigger: GGAACCTGGCTGTGGGGCCCAGCTTTCCATCGGCAA...TTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR TCA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTCTTTGTCATCCTCTCTaGGATCATCTTCTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFLCHPL*DHLLQA Trigger: TGCCTGAAGAAGATGATCTCAGAGAGGATGACAAAG...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR TCA 90 bp | AACCTTCTGATCTCAATACAGAGTCTGGGTTCCTGCTGTCTGAGACGGCCCCTGCTGGGCTCTGCTCAGTaGGCTTTGTCATCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLLISIQSLGSCCLRRPLLGSAQ*ALSSSL Trigger: CAGAGAGGATGACAAAGCTCACTGAGCAGAGCCCAG...CAGGGGCCGTCTCAGACAGCAGGAACCCAGACTCTGTATTGAGATCAGAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR GCA 90 bp | AGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTCTTTTTCAATGTCCTaGACTGCCTGCATGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGTEPYSEGRRPGQPGTLSFSMS*TACMYS Trigger: GCTGTACATGCAGGCAGTGCAGGACATTGAAAAAGA...CAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | AACCTTCTGATCTCAATACAGAGTCTGGGTTCCTGCTGTCTGAGACGGCCCCTGCAGGTAGTACTTGGGTaGGAAAGGGGGCAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLLISIQSLGSCCLRRPLQVVLG*ERGQAV Trigger: AACTGCCTGCCCCCTTTCCCACCCAAGTACTACCTG...CAGGGGCCGTCTCAGACAGCAGGAACCCAGACTCTGTATTGAGATCAGAAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR CCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCTCTCATTATTGCCGATaGAAAGCTGGGCCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPSHYCR*KAGPHS Trigger: GCTGTGGGGCCCAGCTTTCCATCGGCAATAATGAGA...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTTCACTCTGCTCATCTaGAAAGCAATGTCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SGTEPYSEGRRPGQPGTLFTLLI*KAMSWI Trigger: GATCCAGGACATTGCTTTCCAGATGAGCAGAGTGAA...CAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAATGGTTGAGAGTTCGCTaGGGCCCATCGGTATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTEPFLQPRAQSSNSGTEWLRVR*GPSVSS Trigger: GCTGGATACCGATGGGCCCCAGCGAACTCTCAACCA...TTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | ACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAATCACCACAGAGAGCTTaGCCTCCGGGAAACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTEPFLQPRAQSSNSGTESPQRA*PPGNTG Trigger: TCCAGTGTTTCCCGGAGGGCAAGCTCTCTGTGGTGA...TTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGTTCAATGTCCTGCACTaGCTGCATGTACAGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLIVEQNHTVRDAGQGSPFNVLH*LHVQQV Trigger: GACTTGCTGTACATGCAGGCAGTGCAGGACATTGAA...CGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCCCAAGGAAAGTGACCTaGCAGCACTTCACTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASILTWVTQISLQRSYDSPRKVT*QHFTLL Trigger: GAGCAGAGTGAAGTGCTGGCAGGTCACTTTCCTTGG...GCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR CCA 90 bp | GCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCCATGGAGTCCAGAGCTaGGTCCAGGTACCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASILTWVTQISLQRSYDSHGVQS*VQVPLS Trigger: AGAAAGTGGTACCTGGACCCAGCTCTGGACTCCATG...GCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR CCA 90 bp | GCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCTCTCATTATTGCCGATaGAAAGCTGGGCCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASILTWVTQISLQRSYDSSHYCR*KAGPHS Trigger: GCTGTGGGGCCCAGCTTTCCATCGGCAATAATGAGA...GCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR TCA 90 bp | CTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGCGACATTCTGGATGGTaGTATTCAATGTGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLIVEQNHTVRDAGQGSPRHSGW*YSMCAA Trigger: AGCTGCACACATTGAATATCACCATCCAGAATGTCG...CGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTGCTCTTAACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATGGCTGTAGCGTACTTTaGAGAAGAGGAACCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVLLTTEPFLQPRAQSSNGCSVL*RRGTRP Trigger: TGGACGGGTTCCTCTTCTGCAAAGTACGCTACAGCC...ATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGTTAAGAGCACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGGCTGTAGCGTACTTTaGAGAAGAGGAACCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPSLLIVEQNHTVRDGCSVL*RRGTRP Trigger: TGGACGGGTTCCTCTTCTGCAAAGTACGCTACAGCC...GTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATCCAAGGAAAGTGACCTaGCAGCACTTCACTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRFSSPEPSLLIVEQNHPRKVT*QHFTLL Trigger: GAGCAGAGTGAAGTGCTGGCAGGTCACTTTCCTTGG...ATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACATGGAGTCCAGAGCTaGGTCCAGGTACCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEPFLQPRAQSSNSGTEHGVQS*VQVPLS Trigger: AGAAAGTGGTACCTGGACCCAGCTCTGGACTCCATG...TTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCTCTTAACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATTGCAGTCCATCAACATaGAGTCCAGAGCTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVLLTTEPFLQPRAQSSNCSPST*SPELGP Trigger: TGGACCCAGCTCTGGACTCCATGTTGATGGACTGCA...ATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGTTAAGAGCACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATTTTAGTTCCTCCCTCTaGGCCTGTGTGGGTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSRFSSPEPSLLIVEQNHFSSSL*ACVGFI Trigger: GATGAAACCCACACAGGCTCAGAGGGAGGAACTAAA...ATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR TCA 90 bp | AGAACAAACCTCCCATTGGTTGATTTGAACCTGCCCACCTGCCACTTAAGTCAGCTGGGCTCTGCTCAGTaGGCTTTGTCATCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTNLPLVDLNLPTCHLSQLGSAQ*ALSSSL Trigger: CAGAGAGGATGACAAAGCTCACTGAGCAGAGCCCAG...CTGACTTAAGTGGCAGGTGGGCAGGTTCAAATCAACCAATGGGAGGTTTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCTCTTTTTCAATGTCCTaGACTGCCTGCATGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPSFSMS*TACMYS Trigger: GCTGTACATGCAGGCAGTGCAGGACATTGAAAAAGA...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCATGCATCTCTGGGCTCTaGTCAGTGAGCTTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPCISGL*SVSFVI Trigger: GATGACAAAGCTCACTGAGCAGAGCCCAGAGATGCA...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGTGCTTTTTACTTCTaGCTTGTTCTGGAACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPGAFYF*LVLEPR Trigger: TCGAGGTTCCAGAACAAGGCAGAAGTAAAAAGCACC...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCCCCTCTGAGCCTGTGTaGGTTTCATCCATTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPPSEPV*VSSILF Trigger: AAAAAGAATGGATGAAACCCACACAGGCTCAGAGGG...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTATAACAAACCACTGCTaGCAACTATCTTCACTATAC | + |
|
Preference number: 4 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFITNHC*QLSSLY Trigger: GTATAGTGAAGATAGTTGCCAGCAGTGGTTTGTTAT...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATCTAGGTTGGCTCGGGTaGTTTTTACTTCTGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRFSSPEPSLLIVEQNHLGWLG*FLLLPC Trigger: ACAAGGCAGAAGTAAAAAGCACCCGAGCCAACCTAG...ATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACGCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACTGGAAAGCAATGTCCTaGATCTGGCCATTAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GDASILTWVTQISLQRSYWKAMS*IWPLGK Trigger: TTTGCCTAATGGCCAGATCCAGGACATTGCTTTCCA...GTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGCGTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR TCA 90 bp | GCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCAAGTTATACAGCAGCTaGTCTCATTATTGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ASILTWVTQISLQRSYDSKLYSS*SHYCRW Trigger: CCATCGGCAATAATGAGATCAGCTGCTGTATAACTT...GCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACTTTGTCATCCTCTCTaGGATCATCTTCTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTEPFLQPRAQSSNSGTELCHPL*DHLLQA Trigger: TGCCTGAAGAAGATGATCTCAGAGAGGATGACAAAG...TTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGTGCTTTTTACTTCTaGCTTGTTCTGGAACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPGAFYF*LVLEPR Trigger: TCGAGGTTCCAGAACAAGGCAGAAGTAAAAAGCACC...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCCTAAAACTCAAATGCAGTCCATCAACATaGAGTCCAGAGCTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWVTQISLQRSYDSLKLKCSPST*SPELGP Trigger: TGGACCCAGCTCTGGACTCCATGTTGATGGACTGCA...TTTGAGTTTTAGGCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR CCA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCATGGAAAGCAATGTCCTaGATCTGGCCATTAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPWKAMS*IWPLGK Trigger: TTTGCCTAATGGCCAGATCCAGGACATTGCTTTCCA...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACGACAGCGTGTTAAAAACTCAGTaGAGACATCACTCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASILTWVTQISLQRSYDSVLKTQ*RHHSLS Trigger: TGACAAGGAGTGATGTCTTCACTGAGTTTTTAACAC...GCTGTCGTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR TCA 90 bp | TCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACAAGTTATACAGCAGCTaGTCTCATTATTGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPSLLIVEQNHTVRDKLYSS*SHYCRW Trigger: CCATCGGCAATAATGAGATCAGCTGCTGTATAACTT...GTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR GCA 90 bp | GGTGACGCCAGCATACTGACCTGGGTGACACAGATATCTCTGCAGAGATCCTACTTCAATGTGTGCAGCTaGACCAGTGTTAAAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDASILTWVTQISLQRSYFNVCS*TSVKNS Trigger: TGAGTTTTTAACACTGGTGCAGCTGCACACATTGAA...GTAGGATCTCTGCAGAGATATCTGTGTCACCCAGGTCAGTATGCTGGCGTCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR CCA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCATAACAAACCACTGCTaGCAACTATCTTCACTATAC | + |
|
Preference number: 4 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPITNHC*QLSSLY Trigger: GTATAGTGAAGATAGTTGCCAGCAGTGGTTTGTTAT...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATGTGTTAAAAACTCAGTaGAGACATCACTCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRFSSPEPSLLIVEQNHVLKTQ*RHHSLS Trigger: TGACAAGGAGTGATGTCTTCACTGAGTTTTTAACAC...ATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR TCA 90 bp | AGAACAAACCTCCCATTGGTTGATTTGAACCTGCCCACCTGCCACTTAAGTCAGCGACATTCTGGATGGTaGTATTCAATGTGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTNLPLVDLNLPTCHLSQRHSGW*YSMCAA Trigger: AGCTGCACACATTGAATATCACCATCCAGAATGTCG...CTGACTTAAGTGGCAGGTGGGCAGGTTCAAATCAACCAATGGGAGGTTTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAAACCTCCCATTGGTTGATTTGAACCTGCCCACCTGCCACTTAAGTCAGTTCACTCTGCTCATCTaGAAAGCAATGTCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RTNLPLVDLNLPTCHLSQFTLLI*KAMSWI Trigger: GATCCAGGACATTGCTTTCCAGATGAGCAGAGTGAA...CTGACTTAAGTGGCAGGTGGGCAGGTTCAAATCAACCAATGGGAGGTTTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 90 bp | CGATGGAAAGCTGGGCCCCACAGCCAGGTTCCGGGTGGTTGCAGGTaGAGGGATCCAGCTGAACATACCCATAGTGCCGGACCTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RWKAGPHSQVPGGCR*RDPAEHTHSAGPPA Trigger: CGCAGGAGGTCCGGCACTATGGGTATGTTCAGCTGGATCCCTGCACCTGCAACCACCCGGAACCTGGCTGTGGGGCCCAGCTTTCCATCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CAA 90 bp | CCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCGTTTCCAGGTTCCGGGTGGTaGCAGGTGCAGGGATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PYSEGRRPGQPGTLWSSFPGSGW*QVQGSS Trigger: GCTGGATCCCTGCACCTGCAACCACCCGGAACCTGG...AAACGATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATGGCTGCAATCCGAGTTaGTGGGCCATCACCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHGCNPS*WAITSR Trigger: CCTGGAGGTGATGGCCCACAAACTCGGATTGCAGCC...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCCCAGGTTCCGGGTGGTaGCAGGTGCAGGGATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSNSGTEPYSEGRRPGQPPGSGW*QVQGSS Trigger: GCTGGATCCCTGCACCTGCAACCACCCGGAACCTGG...GGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACCATACAGTGAGGGACGCAGGCCAGGGCAGCCCGGGACTTTGTGGTCATCAGCTGATCTCATTATaGCCGATGGAAAGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QNHTVRDAGQGSPGLCGHQLISL*PMESWA Trigger: GGCCCAGCTTTCCATCGGCAATAATGAGATCAGCTG...ATGACCACAAAGTCCCGGGCTGCCCTGGCCTGCGTCCCTCACTGTATGGTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 90 bp | GTCTCAGCTGTTCATCCCAGCGGTGCAGCTGGCTGTAGCGTACTTTaGAGAAGAGGAACCCGTCCAGGTACACGGAGTACAACACGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSAVHPSGAAGCSVL*RRGTRPGTRSTTRS Trigger: GCTACGTGTTGTACTCCGTGTACCTGGACGGGTTCCTCTTCTGCAAAGTACGCTACAGCCAGCTGCACCGCTGGGATGAACAGCTGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 90 bp | GGCAAAGTTATACAGCAGCTGATCTCATTATTGCCGATGGAAAGCTaGGCCCCACAGCCAGGTTCCGGGTGGTTGCAGGTGCAGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GKVIQQLISLLPMES*APQPGSGWLQVQGS Trigger: GGATCCCTGCACCTGCAACCACCCGGAACCTGGCTGTGGGGCCCAGCTTTCCATCGGCAATAATGAGATCAGCTGCTGTATAACTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 90 bp | CGGGAAACACTGGATAAGGAAAAGGCCGAAGTAGCCCACCAGATCTaGCTGCAATCCGAGTTTGTGGGCCATCACCTCCAGGACCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RETLDKEKAEVAHQI*LQSEFVGHHLQDPF Trigger: GAAAGGGTCCTGGAGGTGATGGCCCACAAACTCGGATTGCAGCCAGATCTGGTGGGCTACTTCGGCCTTTTCCTTATCCAGTGTTTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 90 bp | GCGTTCCAACTGGTCCCTCCTCTCTTCAGCCATAGCAGTAGTCATTaGCAGGTAGTACTTGGGTGGGAAAGGGGGCAGGCAGTTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AFQLVPPLFSHSSSH*QVVLGWERGQAVSK Trigger: TTTGGAAACTGCCTGCCCCCTTTCCCACCCAAGTACTACCTGGCAATGACTACTGCTATGGCTGAAGAGAGGAGGGACCAGTTGGAACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCTCTTAACCACTGAGCCGTTTCTCCAGCCCAGAGCCCAGTCTTCTAATTTCACCACAGAGAGCTaGCCCTCCGGGAAACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVLLTTEPFLQPRAQSSNFTTES*PSGKHW Trigger: CCAGTGTTTCCCGGAGGGCAAGCTCTCTGTGGTGAA...ATTAGAAGACTGGGCTCTGGGCTGGAGAAACGGCTCAGTGGTTAAGAGCACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACGCAGGCCATTCACCACAGAGAGCTaGCCCTCCGGGAAACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAQSSNSGTEPYSEGRRPFTTES*PSGKHW Trigger: CCAGTGTTTCCCGGAGGGCAAGCTCTCTGTGGTGAA...TGGCCTGCGTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 90 bp | CTGCTGGCTAGGTTGGCTCGGGTGCTTTTTACTTCTGCCTTGTTCTaGAACCTCGATCTGCATCTCTGGGCTCTGCTCAGTGAGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLARLARVLFTSALF*NLDLHLWALLSELC Trigger: ACAAAGCTCACTGAGCAGAGCCCAGAGATGCAGATCGAGGTTCCAGAACAAGGCAGAAGTAAAAAGCACCCGAGCCAACCTAGCCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161202.8 |
||
| CDS GCA 90 bp | TTTTTCAATGTCCTGCACTGCCTGCATGTACAGCAAGTCTCCAGCTaGTCTGCAGTCCATCAACATGGAGTCCAGAGCTGGGTCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FFNVLHCLHVQQVSS*SAVHQHGVQSWVQV Trigger: TACCTGGACCCAGCTCTGGACTCCATGTTGATGGACTGCAGAGCAGCTGGAGACTTGCTGTACATGCAGGCAGTGCAGGACATTGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 90 bp | TGGCTCGGGTGCTTTTTACTTCTGCCTTGTTCTGGAACCTCGATCTaGATCTCTGGGCTCTGCTCAGTGAGCTTTGTCATCCTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WLGCFLLLPCSGTSI*ISGLCSVSFVILSE Trigger: CTCAGAGAGGATGACAAAGCTCACTGAGCAGAGCCCAGAGATGCAGATCGAGGTTCCAGAACAAGGCAGAAGTAAAAAGCACCCGAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 90 bp | TTTCTGGCTAGGTTGGCTCGGGTGCTTTTTACTTCTGCCTTGTTCTaGAACCTCGATCTGCATCTCTGGGCTCTGCTCAGTGAGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLARLARVLFTSALF*NLDLHLWALLSELC Trigger: ACAAAGCTCACTGAGCAGAGCCCAGAGATGCAGATCGAGGTTCCAGAACAAGGCAGAAGTAAAAAGCACCCGAGCCAACCTAGCCAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013755.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCCAGAGCCCAGTCTTCTAATAGTGGAACAGAACCATACAGTGAGGGACTTTCTGCTGGCTAGGTaGGCTCGGGTGCTTTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SSPEPSLLIVEQNHTVRDFLLAR*ARVLFT Trigger: AGTAAAAAGCACCCGAGCCAACCTAGCCAGCAGAAA...GTCCCTCACTGTATGGTTCTGTTCCACTATTAGAAGACTGGGCTCTGGGCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161202.8 |
||
| CDS TCA 90 bp | GGCAACTATCTTCACTATACTGAAATCTCAGCTCTAGGTTCTGGTTaGGAGTTCGCTGGGGCCCATCGGTATCCAGCAGAGTTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GNYLHYTEISALGSG*EFAGAHRYPAEFQG Trigger: TCCTTGGAACTCTGCTGGATACCGATGGGCCCCAGCGAACTCTCAACCAGAACCTAGAGCTGAGATTTCAGTATAGTGAAGATAGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 90 bp | TTACTTCTGCCTTGTTCTGGAACCTCGATCTGCATCTCTGGGCTCTaGTCAGTGAGCTTTGTCATCCTCTCTGAGATCATCTTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLPCSGTSICISGL*SVSFVILSEIIFFR Trigger: CCTGAAGAAGATGATCTCAGAGAGGATGACAAAGCTCACTGAGCAGAGCCCAGAGATGCAGATCGAGGTTCCAGAACAAGGCAGAAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 90 bp | TCTCTTTCTTCTGCAGTGCCTTTAGTTCCTCCCTCTGAGCCTGTGTaGGTTTCATCCATTCTTTTTCAATGTCCTGCACTGCCTGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSSAVPLVPPSEPV*VSSILFQCPALPAC Trigger: ACATGCAGGCAGTGCAGGACATTGAAAAAGAATGGATGAAACCCACACAGGCTCAGAGGGAGGAACTAAAGGCACTGCAGAAGAAAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 90 bp | TGCCAGCACTTCACTCTGCTCATCTGGAAAGCAATGTCCTGGATCTaGCCATTAGGCAAAGTTATACAGCAGCTGATCTCATTATTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CQHFTLLIWKAMSWI*PLGKVIQQLISLLP Trigger: CGGCAATAATGAGATCAGCTGCTGTATAACTTTGCCTAATGGCCAGATCCAGGACATTGCTTTCCAGATGAGCAGAGTGAAGTGCTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 90 bp | AGGAATACAGCCAGCTCGACATTCTGGATGGTGATATTCAATGTGTaGAGCTGCACCAGTGTTAAAAACTCAGTGAAGACATCACTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNTASSTFWMVIFNV*SCTSVKNSVKTSLL Trigger: AAGGAGTGATGTCTTCACTGAGTTTTTAACACTGGTGCAGCTGCACACATTGAATATCACCATCCAGAATGTCGAGCTGGCTGTATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 72 bp | GCTGGGCCCCACAGCCAGGTTCCGGGTGGTTGCAGGTaGAGGGATCCAGCTGAACATACCCATAGTGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGPHSQVPGGCR*RDPAEHTHSAG Trigger: TCCGGCACTATGGGTATGTTCAGCTGGATCCCTGCACCTGCAACCACCCGGAACCTGGCTGTGGGGCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 72 bp | GTTCATCCCAGCGGTGCAGCTGGCTGTAGCGTACTTTaGAGAAGAGGAACCCGTCCAGGTACACGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: VHPSGAAGCSVL*RRGTRPGTRST Trigger: TGTACTCCGTGTACCTGGACGGGTTCCTCTTCTGCAAAGTACGCTACAGCCAGCTGCACCGCTGGGATGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 72 bp | ATACAGCAGCTGATCTCATTATTGCCGATGGAAAGCTaGGCCCCACAGCCAGGTTCCGGGTGGTTGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IQQLISLLPMES*APQPGSGWLQV Trigger: CACCTGCAACCACCCGGAACCTGGCTGTGGGGCCCAGCTTTCCATCGGCAATAATGAGATCAGCTGCTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 72 bp | CTGGATAAGGAAAAGGCCGAAGTAGCCCACCAGATCTaGCTGCAATCCGAGTTTGTGGGCCATCACCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LDKEKAEVAHQI*LQSEFVGHHLQ Trigger: CTGGAGGTGATGGCCCACAAACTCGGATTGCAGCCAGATCTGGTGGGCTACTTCGGCCTTTTCCTTATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CAA 72 bp | AGCTCAAAGTCGGCCAGCTTCTTCACCACAGAGAGCTaGCCCTCCGGGAAACACTGGATAAGGAAAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSKSASFFTTES*PSGKHWIRKRP Trigger: CGGCCTTTTCCTTATCCAGTGTTTCCCGGAGGGCAAGCTCTCTGTGGTGAAGAAGCTGGCCGACTTTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 72 bp | AGCTGCTCTGCAGTCCATCAACATGGAGTCCAGAGCTaGGTCCAGGTACCACTTTCTGAGCCCGATCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: SCSAVHQHGVQS*VQVPLSEPDLT Trigger: TGTAAGATCGGGCTCAGAAAGTGGTACCTGGACCCAGCTCTGGACTCCATGTTGATGGACTGCAGAGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CAA 72 bp | CTGGCTAGGTTGGCTCGGGTGCTTTTTACTTCTGCCTaGTTCTGGAACCTCGATCTGCATCTCTGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LARLARVLFTSA*FWNLDLHLWAL Trigger: CAGAGCCCAGAGATGCAGATCGAGGTTCCAGAACAAGGCAGAAGTAAAAAGCACCCGAGCCAACCTAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CAA 90 bp | TGGATCTGGCCATTAGGCAAAGTTATACAGCAGCTGATCTCATTATaGCCGATGGAAAGCTGGGCCCCACAGCCAGGTTCCGGGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WIWPLGKVIQQLISL*PMESWAPQPGSGWL Trigger: CAACCACCCGGAACCTGGCTGTGGGGCCCAGCTTTCCATCGGCAATAATGAGATCAGCTGCTGTATAACTTTGCCTAATGGCCAGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CCA 72 bp | AGGTTGGCTCGGGTGCTTTTTACTTCTGCCTTGTTCTaGAACCTCGATCTGCATCTCTGGGCTCTGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RLARVLFTSALF*NLDLHLWALLS Trigger: ACTGAGCAGAGCCCAGAGATGCAGATCGAGGTTCCAGAACAAGGCAGAAGTAAAAAGCACCCGAGCCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CAA 72 bp | ATCACTCCTTGTCACACGGGGATCCGCAGTTACATTTaGCAGGTAGCGTTCCAACTGGTCCCTCCTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ITPCHTGIRSYI*QVAFQLVPPLF Trigger: GAAGAGAGGAGGGACCAGTTGGAACGCTACCTGCAAAATGTAACTGCGGATCCCCGTGTGACAAGGAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS CAA 90 bp | AGTGAAGACATCACTCCTTGTCACACGGGGATCCGCAGTTACATTTaGCAGGTAGCGTTCCAACTGGTCCCTCCTCTCTTCAGCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: SEDITPCHTGIRSYI*QVAFQLVPPLFSHS Trigger: GCTATGGCTGAAGAGAGGAGGGACCAGTTGGAACGCTACCTGCAAAATGTAACTGCGGATCCCCGTGTGACAAGGAGTGATGTCTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 72 bp | CCATCGGTATCCAGCAGAGTTCCAAGGAAAGTGACCTaGCAGCACTTCACTCTGCTCATCTGGAAAGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: PSVSSRVPRKVT*QHFTLLIWKAM Trigger: CATTGCTTTCCAGATGAGCAGAGTGAAGTGCTGGCAGGTCACTTTCCTTGGAACTCTGCTGGATACCGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS GCA 72 bp | CCTTGTTCTGGAACCTCGATCTGCATCTCTGGGCTCTaGTCAGTGAGCTTTGTCATCCTCTCTGAGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: PCSGTSICISGL*SVSFVILSEII Trigger: GATGATCTCAGAGAGGATGACAAAGCTCACTGAGCAGAGCCCAGAGATGCAGATCGAGGTTCCAGAACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
||
| CDS TCA 72 bp | CTCTGGGCTCTGCTCAGTGAGCTTTGTCATCCTCTCTaGGATCATCTTCTTCAGGCAGCTGCTCAGGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: LWALLSELCHPL*DHLLQAAAQEK Trigger: TTTTTCCTGAGCAGCTGCCTGAAGAAGATGATCTCAGAGAGGATGACAAAGCTCACTGAGCAGAGCCCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS GCA 72 bp | GCCTGTGTGGGTTTCATCCATTCTTTTTCAATGTCCTaGACTGCCTGCATGTACAGCAAGTCTCCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ACVGFIHSFSMS*TACMYSKSPAA Trigger: AGCAGCTGGAGACTTGCTGTACATGCAGGCAGTGCAGGACATTGAAAAAGAATGGATGAAACCCACACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS CCA 72 bp | CTTCCATCAGGCAGGAATACAGCCAGCTCGACATTCTaGATGGTGATATTCAATGTGTGCAGCTGCACCAGT | + |
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Preference number: 6 (lower is better) Translates to: LPSGRNTASSTF*MVIFNVCSCTS Trigger: ACTGGTGCAGCTGCACACATTGAATATCACCATCCAGAATGTCGAGCTGGCTGTATTCCTGCCTGATGGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS GCA 72 bp | TGTGGGTTTCATCCATTCTTTTTCAATGTCCTGCACTaGCTGCATGTACAGCAAGTCTCCAGCTGCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CGFHPFFFNVLH*LHVQQVSSCSA Trigger: TGCAGAGCAGCTGGAGACTTGCTGTACATGCAGGCAGTGCAGGACATTGAAAAAGAATGGATGAAACCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS CCA 72 bp | TCTGCAGTGCCTTTAGTTCCTCCCTCTGAGCCTGTGTaGGTTTCATCCATTCTTTTTCAATGTCCTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: SAVPLVPPSEPV*VSSILFQCPAL Trigger: CAGTGCAGGACATTGAAAAAGAATGGATGAAACCCACACAGGCTCAGAGGGAGGAACTAAAGGCACTGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS CAA 90 bp | GAACATACCCATAGTGCCGGACCTCCTGCGACAGCTCCAAAAACTTaGTTTGATTCTCTTTCTTCTGCAGTGCCTTTAGTTCCTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: EHTHSAGPPATAPKT*FDSLSSAVPLVPPS Trigger: AGAGGGAGGAACTAAAGGCACTGCAGAAGAAAGAGAATCAAACAAAGTTTTTGGAGCTGTCGCAGGAGGTCCGGCACTATGGGTATGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS TCA 72 bp | TTCTCTTTCTTCTGCAGTGCCTTTAGTTCCTCCCTCTaGGCCTGTGTGGGTTTCATCCATTCTTTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: FSFFCSAFSSSL*ACVGFIHSFSM Trigger: CATTGAAAAAGAATGGATGAAACCCACACAGGCTCAGAGGGAGGAACTAAAGGCACTGCAGAAGAAAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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| CDS TCA 72 bp | ATAACAAACCACTGCTGGCAACTATCTTCACTATACTaGAATCTCAGCTCTAGGTTCTGGTTGAGAGTTCGC | + |
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Preference number: 6 (lower is better) Translates to: ITNHCWQLSSLY*NLSSRFWLRVR Trigger: GCGAACTCTCAACCAGAACCTAGAGCTGAGATTTCAGTATAGTGAAGATAGTTGCCAGCAGTGGTTTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013755.12 ENSMUST00000161202.8 |
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