Pregenerated sensors for SNX21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050373Ensembl transcript IDs: ENSMUST00000056181.7, ENSMUST00000140519.2, ENSMUST00000152471.2, ENSMUST00000172577.8, ENSMUST00000174070.8
Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCTGGGCCAGATaGGGTGCCCAACTGGGTCTGCAGCTGCCAGGCGTTGGCCCACAA | + |
|
Preference number: 1 (lower is better) Translates to: HGQPSQSQQGTVWAR*GAQLGLQLPGVGPQ Trigger: TTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 90 bp | GGCGGTGGGGTAGAGGTAAGGCCTGCTTCCTGTAGTGCCTGGAGCTaGGCCTCCGACTGCCGTTTGTCCAGGCCCAGGCGCCAGGAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: GGGVEVRPASCSAWS*ASDCRLSRPRRQES Trigger: GCTCTCCTGGCGCCTGGGCCTGGACAAACGGCAGTCGGAGGCCCAGCTCCAGGCACTACAGGAAGCAGGCCTTACCTCTACCCCACCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 90 bp | AGGCTGGGCGGTGGGGTAGAGGTAAGGCCTGCTTCCTGTAGTGCCTaGAGCTGGGCCTCCGACTGCCGTTTGTCCAGGCCCAGGCGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: RLGGGVEVRPASCSA*SWASDCRLSRPRRQ Trigger: CTGGCGCCTGGGCCTGGACAAACGGCAGTCGGAGGCCCAGCTCCAGGCACTACAGGAAGCAGGCCTTACCTCTACCCCACCGCCCAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR TCA 90 bp | GCCTTCTCACTGCAGGCTCGGGCTTCCCCGGGATCCTCCAGCTCCTaGTGGCACACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: AFSLQARASPGSSSS*WHTASPARVNRGRS Trigger: AGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTGTGCCATCAGGAGCTGGAGGATCCCGGGGAAGCCCGAGCCTGCAGTGAGAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 90 bp | CCAGCCCAGCCAGAGTCAACAGGGGACGGTCTGGGCCAGATGGGGTaGCCAACTGGGTCTGCAGCTGCCAGGCGTTGGCCCACAATGCCA | + |
|
Preference number: 1 (lower is better) Translates to: PAQPESTGDGLGQMG*PTGSAAARRWPTMP Trigger: TGGCATTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 90 bp | CTGATGGCACACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCTaGGCCAGATGGGGTGCCCAACTGGGTCTGCAGCTGCCAGGCGTT | + |
|
Preference number: 1 (lower is better) Translates to: LMAHGQPSQSQQGTV*ARWGAQLGLQLPGV Trigger: AACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTGTGCCATCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 90 bp | GTGAGGCTCTGTGCCCGCCGCAACTCGGGCAGCACAAAGAAGTCCTaGAGGTCCGGAGCTTGGCGTAGCTCTGGCACTGCCTGCAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: VRLCARRNSGSTKKS*RSGAWRSSGTACRW Trigger: CCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCAGGACTTCTTTGTGCTGCCCGAGTTGCGGCGGGCACAGAGCCTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 90 bp | TCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTaGCGTCGGGATGGGGTCCTTGCTGTGACCTGTGCCCAGGAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: SLLTGGSRGLVHGRL*RRDGVLAVTCAQEG Trigger: ACCCTCCTGGGCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR GCA 90 bp | TCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTaGTGTGACCTGTGCCCAGGAGGGTGTGATCCGATTGAAGCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: SRAGAWAAVASGWGP*CDLCPGGCDPIEAS Trigger: TGAGGCTTCAATCGGATCACACCCTCCTGGGCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR GCA 90 bp | GCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGTaGCCAGGAGGGTGTGATCCGATTGAAGCCTCAGGTGTCAGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: AWAAVASGWGPCCDL*PGGCDPIEASGVRE Trigger: CTCTCTGACACCTGAGGCTTCAATCGGATCACACCCTCCTGGGCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 90 bp | TCTCACCTTCTCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATaGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: SHLLLAYRWLSRAGA*AAVASGWGPCCDLC Trigger: GCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 90 bp | CTTGTGCTGAAGCAGGGGCCATCTCACCTTCTCCTTGCTTACAGGTaGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGG | + |
|
Preference number: 1 (lower is better) Translates to: LVLKQGPSHLLLAYR*LSRAGAWAAVASGW Trigger: CCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 90 bp | GCAAAGCACGCTTGTGCTGAAGCAGGGGCCATCTCACCTTCTCCTTaGTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: AKHACAEAGAISPSP*LQVALEGWCMGGCG Trigger: GCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACAAGCGTGCTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 90 bp | GAGATGGCAGACATGGGGCCCCGGAATTGCCGCTGCAGGTTTCTGTaGAGCCGCTCAAAGTCCGAGTATCGGCGAGAGATCTGGGCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: EMADMGPRNCRCRFL*SRSKSEYRREIWAG Trigger: GCCAGCCCAGATCTCTCGCCGATACTCGGACTTTGAGCGGCTGCACAGAAACCTGCAGCGGCAATTCCGGGGCCCCATGTCTGCCATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 90 bp | TGGGGTGCCCAACTGGGTCTGCAGCTGCCAGGCGTTGGCCCACAATaGCAGAGCCTCACGATAAAGACCAGTGCAGGTGAGGCTCTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: WGAQLGLQLPGVGPQ*QSLTIKTSAGEALC Trigger: GCACAGAGCCTCACCTGCACTGGTCTTTATCGTGAGGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 90 bp | AAGAAGTCCTGCAGGTCCGGAGCTTGGCGTAGCTCTGGCACTGCCTaGAGGTGGCCCAAAAACTGTTCAAAGGCCCTGCTGCGACGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: KKSCRSGAWRSSGTA*RWPKNCSKALLRRA Trigger: TGCCCGTCGCAGCAGGGCCTTTGAACAGTTTTTGGGCCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCAGGACTTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 90 bp | CAATGCCAGAGCCTCACGATAAAGACCAGTGCAGGTGAGGCTCTGTaGCCGCCGCAACTCGGGCAGCACAAAGAAGTCCTGCAGGTCCGG | + |
|
Preference number: 1 (lower is better) Translates to: QCQSLTIKTSAGEAL*PPQLGQHKEVLQVR Trigger: CCGGACCTGCAGGACTTCTTTGTGCTGCCCGAGTTGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTTATCGTGAGGCTCTGGCATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 90 bp | TCCTGCAGGTCCGGAGCTTGGCGTAGCTCTGGCACTGCCTGCAGGTaGCCCAAAAACTGTTCAAAGGCCCTGCTGCGACGGGCAATGGTT | + |
|
Preference number: 1 (lower is better) Translates to: SCRSGAWRSSGTACR*PKNCSKALLRRAMV Trigger: AACCATTGCCCGTCGCAGCAGGGCCTTTGAACAGTTTTTGGGCCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 90 bp | CGCCGCAACTCGGGCAGCACAAAGAAGTCCTGCAGGTCCGGAGCTTaGCGTAGCTCTGGCACTGCCTGCAGGTGGCCCAAAAACTGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: RRNSGSTKKSCRSGA*RSSGTACRWPKNCS Trigger: TGAACAGTTTTTGGGCCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCAGGACTTCTTTGTGCTGCCCGAGTTGCGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR TCA 90 bp | CGTTGGCCCACAATGCCAGAGCCTCACGATAAAGACCAGTGCAGGTaGGGCTCTGTGCCCGCCGCAACTCGGGCAGCACAAAGAAGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: RWPTMPEPHDKDQCR*GSVPAATRAAQRSP Trigger: AGGACTTCTTTGTGCTGCCCGAGTTGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTTATCGTGAGGCTCTGGCATTGTGGGCCAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 90 bp | GCCCAAAAACTGTTCAAAGGCCCTGCTGCGACGGGCAATGGTTTCTaGAGTAAAGTTCCGGCGCAGGCGCTTACGGGGAAAGGAGATGGC | + |
|
Preference number: 1 (lower is better) Translates to: AQKLFKGPAATGNGF*SKVPAQALTGKGDG Trigger: GCCATCTCCTTTCCCCGTAAGCGCCTGCGCCGGAACTTTACTGCAGAAACCATTGCCCGTCGCAGCAGGGCCTTTGAACAGTTTTTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR TCA 90 bp | GCTCTGCCCTGTGTCAGATCCTTTGCAGGCAAAGCACGCTTGTGCTaGAGCAGGGGCCATCTCACCTTCTCCTTGCTTACAGGTGGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: ALPCVRSFAGKARLC*SRGHLTFSLLTGGS Trigger: AGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACAAGCGTGCTTTGCCTGCAAAGGATCTGACACAGGGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 90 bp | TGTCATTGTCTGGAAAACAGGACAGGGAGTGACGCTCACACCCTGTaGCTAAAGCAGACCTCAGTGGGCTCTGCTGTGTCACCTGAAGCT | + |
|
Preference number: 1 (lower is better) Translates to: CHCLENRTGSDAHTL*LKQTSVGSAVSPEA Trigger: AGCTTCAGGTGACACAGCAGAGCCCACTGAGGTCTGCTTTAGCCACAGGGTGTGAGCGTCACTCCCTGTCCTGTTTTCCAGACAATGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR TCA 90 bp | CCTGGTTGTACTTTAGTGTCATTGTCTGGAAAACAGGACAGGGAGTaGCGCTCACACCCTGTGGCTAAAGCAGACCTCAGTGGGCTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: PGCTLVSLSGKQDRE*RSHPVAKADLSGLC Trigger: GCAGAGCCCACTGAGGTCTGCTTTAGCCACAGGGTGTGAGCGTCACTCCCTGTCCTGTTTTCCAGACAATGACACTAAAGTACAACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 90 bp | TCTGACAGGTGGCCAGAGATGTGGCAGTCTGCTTGGCCAAGCCTTTaGAGACTTGTCAGAGCCCCTCTGATCTTTTTGAGAAGTGAGCAG | + |
|
Preference number: 1 (lower is better) Translates to: SDRWPEMWQSAWPSL*RLVRAPLIFLRSEQ Trigger: CTGCTCACTTCTCAAAAAGATCAGAGGGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 90 bp | GTGTCAGAAAGGAAAGAATGGGATTCTGACAGGTGGCCAGAGATGTaGCAGTCTGCTTGGCCAAGCCTTTGGAGACTTGTCAGAGCCCCT | + |
|
Preference number: 1 (lower is better) Translates to: VSERKEWDSDRWPEM*QSAWPSLWRLVRAP Trigger: AGGGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGAATCCCATTCTTTCCTTTCTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 90 bp | AGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTaGTGCAGACTCTTTCTGGAACTACTCAATAGGCTCCCAGCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: SLLGVLSGIIKFPSV*CRLFLELLNRLPAA Trigger: AGCAGCTGGGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| 3UTR CCA 90 bp | AGTCCCCAGCCCTTCACCAAACTGTTTCACTGGTTTAGAGGCCCATaGATACAGAGACATACTGATTCTGACCTTGGCCACAGCCTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: SPQPFTKLFHWFRGP*IQRHTDSDLGHSLQ Trigger: CTGGAGGCTGTGGCCAAGGTCAGAATCAGTATGTCTCTGTATCCATGGGCCTCTAAACCAGTGAAACAGTTTGGTGAAGGGCTGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR TCA 90 bp | TGGAAGGACTTGGCTTTGTGTGTCAGAAAGGAAAGAATGGGATTCTaGCAGGTGGCCAGAGATGTGGCAGTCTGCTTGGCCAAGCCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: WKDLALCVRKERMGF*QVARDVAVCLAKPL Trigger: CAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGAATCCCATTCTTTCCTTTCTGACACACAAAGCCAAGTCCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 90 bp | TCCCTGCGCCTGGCCTCATTTACCTCCTATTATAATCCCATGTATTaGCTATTGCTCAAAAGAGGAAACTGGGGGCCACTGAGGCCACAG | + |
|
Preference number: 1 (lower is better) Translates to: SLRLASFTSYYNPMY*LLLKRGNWGPLRPQ Trigger: CTGTGGCCTCAGTGGCCCCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGATTATAATAGGAGGTAAATGAGGCCAGGCGCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CCA 90 bp | AAAGAATGGGATTCTGACAGGTGGCCAGAGATGTGGCAGTCTGCTTaGCCAAGCCTTTGGAGACTTGTCAGAGCCCCTCTGATCTTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: KEWDSDRWPEMWQSA*PSLWRLVRAPLIFL Trigger: CAAAAAGATCAGAGGGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGAATCCCATTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 90 bp | TTACCAGCTGGAAGGACTTGGCTTTGTGTGTCAGAAAGGAAAGAATaGGATTCTGACAGGTGGCCAGAGATGTGGCAGTCTGCTTGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: LPAGRTWLCVSERKE*DSDRWPEMWQSAWP Trigger: TGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGAATCCCATTCTTTCCTTTCTGACACACAAAGCCAAGTCCTTCCAGCTGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 90 bp | CTCCTTATGGTCAGGAAAGGGTTACTCGAGTACAGACACCATCGCTaGGCAGGATTCGTGACCTTGAAGTTAGGACACTCAGTCAGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: LLMVRKGLLEYRHHR*AGFVTLKLGHSVSF Trigger: AAAGCTGACTGAGTGTCCTAACTTCAAGGTCACGAATCCTGCGCAGCGATGGTGTCTGTACTCGAGTAACCCTTTCCTGACCATAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR TCA 90 bp | TCAGTTTTAGAGAAACTAAGTCATTTGCCTGAGGACGTGTTCAGTTaGCACCCATCTTCTCATCTGGTCTCAGTTCCCCCAGGTGTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: SVLEKLSHLPEDVFS*HPSSHLVSVPPGVK Trigger: TTTTACACCTGGGGGAACTGAGACCAGATGAGAAGATGGGTGTCAACTGAACACGTCCTCAGGCAAATGACTTAGTTTCTCTAAAACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR GCA 90 bp | TACAGTTTTAATCTATCACAGTGCCAGACAATGCTAAGGTTTCCCTaGGCCTGGCCTCATTTACCTCCTATTATAATCCCATGTATTGCC | + |
|
Preference number: 1 (lower is better) Translates to: YSFNLSQCQTMLRFP*AWPHLPPIIIPCIA Trigger: GGCAATACATGGGATTATAATAGGAGGTAAATGAGGCCAGGCGCAGGGAAACCTTAGCATTGTCTGGCACTGTGATAGATTAAAACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCTGATGGCACACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCTGGGCGAGATCTGGGCTGGCTaGCGATCTGGTGGCCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: APDGTRPAQPESTGDGLGEIWAG*RSGGPG Trigger: CCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTC...GCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTGTGCCATCAGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCTGATGGCACACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCTGGGCGCGAGAGATCTGGGCTaGCTGGCGATCTGGTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: APDGTRPAQPESTGDGLGARDLG*LAIWWP Trigger: GGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGC...GCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTGTGCCATCAGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCTGATGGCACACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCTGGGCCCCCGGAATTGCCGCTaGAGGTTTCTGTGCAGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: APDGTRPAQPESTGDGLGPRNCR*RFLCSR Trigger: GCGGCTGCACAGAAACCTGCAGCGGCAATTCCGGGG...GCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTGTGCCATCAGGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCCAGGCGCCAGGAGAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGAAAGACCAGTGCAGGTaGGGCTCTGTGCCCGCCGCA | + |
|
Preference number: 2 (lower is better) Translates to: AQAPGEPDMGLKKGCQERKDQCR*GSVPAA Trigger: TGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTT...CCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTCTCCTGGCGCCTGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGCCTTGCTGTGACCTGTaGCCAGGAGGGTGTGATCCG | + |
|
Preference number: 2 (lower is better) Translates to: RAGAWAAVASGWGPCCDLPCCDL*PGGCDP Trigger: CGGATCACACCCTCCTGGGCACAGGTCACAGCAAGG...CAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCAACAGGGGACGGTCTGGGCCAGATGGGGTGCCCAACTGGGTCTGCAGCGAGATCTGGGCTGGCTaGCGATCTGGTGGCCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RVNRGRSGPDGVPNWVCSEIWAG*RSGGPG Trigger: CCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTC...GCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGTGCCCAACTGGGTCTGCAGCTGCCAGGCGTTGGCCCACAATGCCAGAGCTGCAGGTCCGGAGCTTaGCGTAGCTCTGGCACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: WGAQLGLQLPGVGPQCQSCRSGA*RSSGTA Trigger: GGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCA...GCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCCAGGCGCCAGGAGAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGCAACAGGGGACGGTCTaGGCCAGATGGGGTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AQAPGEPDMGLKKGCQERQQGTV*ARWGAQ Trigger: TTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTG...CCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTCTCCTGGCGCCTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCTGATGGCACACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCTGGGCCGCTGCAGGTTTCTGTaGAGCCGCTCAAAGTCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: APDGTRPAQPESTGDGLGRCRFL*SRSKSE Trigger: CTCGGACTTTGAGCGGCTGCACAGAAACCTGCAGCG...GCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTGTGCCATCAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCCAGAGTCAACAGGGGACGGTCTGGGCCAGATGGGGTGCCCAACTGGGTCATGGGGCCCCGGAATTaGCGCTGCAGGTTTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PARVNRGRSGPDGVPNWVMGPRN*RCRFLC Trigger: GCACAGAAACCTGCAGCGGCAATTCCGGGGCCCCAT...GACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTTATCGGCGAGAGATCTaGGCTGGCTGGCGATCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LSRAGAWAAVASGWGPCCYRREI*AGWRSG Trigger: ACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATA...ACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| 3UTR-3UTR GCA 90 bp | CGCCAGGAGAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGATGGGGTCCCCGGAATTGCCGCTaGAGGTTTCTGTGCAGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: RQESRTWASRKGARKGWGPRNCR*RFLCSR Trigger: GCGGCTGCACAGAAACCTGCAGCGGCAATTCCGGGG...ACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTCTCCTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCCAGGAGAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGATGGGGTAGGAGATGGCAGACATaGGGCCCCGGAATTGCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: RQESRTWASRKGARKGWGRRWQT*GPGIAA Trigger: AGCGGCAATTCCGGGGCCCCATGTCTGCCATCTCCT...ACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTCTCCTGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGGGCACTGCCTGCAGGTaGCCCAAAAACTGTTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RAGAWAAVASGWGPCCDLGTACR*PKNCSK Trigger: CTTTGAACAGTTTTTGGGCCACCTGCAGGCAGTGCC...CAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCCAGAGTCAACAGGGGACGGTCTGGGCCAGATGGGGTGCCCAACTGGGTCACTGTTCAAAGGCCCTaGTGCGACGGGCAATGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PARVNRGRSGPDGVPNWVTVQRP*CDGQWF Trigger: AAACCATTGCCCGTCGCAGCAGGGCCTTTGAACAGT...GACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGATGGGGTCTCTTGTCCCCTGTCCCCTAACCTaGGCCAGCCTGTCTCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: EPDMGLKKGCQERMGSLVPCPLT*ASLSPR Trigger: CCTAGGAGACAGGCTGGCCCAGGTTAGGGGACAGGG...GACAAGAGACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCAGACATGGGGCCCCGGAATTGCCGCTGCAGGTTTCTGTGCAGCCGCTCATATCGGCGAGAGATCTaGGCTGGCTGGCGATCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: MADMGPRNCRCRFLCSRSYRREI*AGWRSG Trigger: ACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATA...TGAGCGGCTGCACAGAAACCTGCAGCGGCAATTCCGGGGCCCCATGTCTGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGATGGGGTCTCTTGTCGGCAGGAGTCACAGTTaGGAGCTGGGCTTCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: EPDMGLKKGCQERMGSLVGRSHS*ELGFLP Trigger: AGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCC...GACAAGAGACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGCCAAGACTTCCTCCTaGTGTTATCCTAGGGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: SLLTGGSRGLVHGRLWRRAKTSS*CYPRVT Trigger: GGTTACCCTAGGATAACACCAGGAGGAAGTCTTGGC...CCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCAGGCGCCAGGAGAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGAAGTTCCCCTCAGTCTaGTGCAGACTCTTTCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GPGARRAGHGPQERVPGKKFPSV*CRLFLE Trigger: TTCCAGAAAGAGTCTGCAGCAGACTGAGGGGAACTT...CTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTCTCCTGGCGCCTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGATAAAGACCAGTGCAGGTGAGGCTCTGTGCCCGCCGCAACTCGGGCAGCACACTGTTCAAAGGCCCTaGTGCGACGGGCAATGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: TIKTSAGEALCPPQLGQHTVQRP*CDGQWF Trigger: AAACCATTGCCCGTCGCAGCAGGGCCTTTGAACAGT...GTGCTGCCCGAGTTGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTTATCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGTCACACAGGGGCACTTaGCACTTTGGAATCATGATG | + |
|
Preference number: 2 (lower is better) Translates to: SLLTGGSRGLVHGRLWRRSHRGT*HFGIMM Trigger: CATCATGATTCCAAAGTGCCAAGTGCCCCTGTGTGA...CCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGCAGGCGAGAGATCTGGGCTaGCTGGCGATCTGGTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KPARSPVWHNKVPLSLLQARDLG*LAIWWP Trigger: GGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGC...CTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| 3UTR CAA 90 bp | CAGTGTGCGGTTGTATGGGGACAGCTCTGCCCTGTGTCAGATCCTTaGCAGGCAAAGCACGCTTGTGCTGAAGCAGGGGCCATCTCACCT | + |
|
Preference number: 2 (lower is better) Translates to: QCAVVWGQLCPVSDP*QAKHACAEAGAISP Trigger: AGGTGAGATGGCCCCTGCTTCAGCACAAGCGTGCTTTGCCTGCAAAGGATCTGACACAGGGCAGAGCTGTCCCCATACAACCGCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGATGGGGTCTCTTGTCGGCGTTGGCCCACAATaGCAGAGCCTCACGATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EPDMGLKKGCQERMGSLVGVGPQ*QSLTIK Trigger: CTTTATCGTGAGGCTCTGGCATTGTGGGCCAACGCC...GACAAGAGACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCCCTGTCCCCTAACCTaGGCCAGCCTGTCTCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: QPKPARSPVWHNKVPLSLPCPLT*ASLSPR Trigger: CCTAGGAGACAGGCTGGCCCAGGTTAGGGGACAGGG...CAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTACCAAACTGTTTCACTaGTTTAGAGGCCCATGGATA | + |
|
Preference number: 2 (lower is better) Translates to: LSRAGAWAAVASGWGPCCTKLFH*FRGPWI Trigger: TATCCATGGGCCTCTAAACCAGTGAAACAGTTTGGT...ACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTGCCAGGCGTTGGCCCACAATGCCAGAGCCTCACGATAAAGACCAGTGCGGCACTGCCTGCAGGTaGCCCAAAAACTGTTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: AAARRWPTMPEPHDKDQCGTACR*PKNCSK Trigger: CTTTGAACAGTTTTTGGGCCACCTGCAGGCAGTGCC...GCACTGGTCTTTATCGTGAGGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CAA 90 bp | GCTCAGAGCCACCAAGGGAAAGATAGAGAAAGGAGGCCACACACTTaGAGGGCTCTAGATCCTCTCAGGTGCACCCTCCCCCTTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: AQSHQGKDRERRPHT*RALDPLRCTLPLVV Trigger: CACCACAAGGGGGAGGGTGCACCTGAGAGGATCTAGAGCCCTCAAAGTGTGTGGCCTCCTTTCTCTATCTTTCCCTTGGTGGCTCTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGGGCAGGAGTCACAGTTaGGAGCTGGGCTTCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QPKPARSPVWHNKVPLSLGRSHS*ELGFLP Trigger: AGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCC...CAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCTAAAATGGGGTCCTTGCTGTaGCCTGTGCCCAGGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RCQRVSYSERCLARPGAKMGSLL*PVPRRV Trigger: CACCCTCCTGGGCACAGGTCACAGCAAGGACCCCAT...TTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR-3UTR GCA 90 bp | CGCCAGGAGAGCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGATGGGGTTTCCCCTCAGTCTGCTaGAGACTCTTTCTGGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: RQESRTWASRKGARKGWGFPSVC*RLFLEL Trigger: TAGTTCCAGAAAGAGTCTGCAGCAGACTGAGGGGAA...ACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGCTCTCCTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCTAAAAGGGCTGTGGCGTCGGGATaGGGTCCTTGCTGTGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: CQRVSYSERCLARPGAKRAVASG*GPCCDL Trigger: CAGGTCACAGCAAGGACCCCATCCCGACGCCACAGC...CCTTTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGAGGCTGAAGAGCCCATaGCAAGACTTCCTCCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QPKPARSPVWHNKVPLSLRLKSP*QDFLLV Trigger: CACCAGGAGGAAGTCTTGGCATGGGCTCTTCAGCCT...CAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCTAGCCTCCTGAGGATAACTAGGCCAGGCTCAGAGCCACCAAGGGAAAGAGAAAGAATGGGATTCTaGCAGGTGGCCAGAGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: EASLLRITRPGSEPPRERERMGF*QVARDV Trigger: CACATCTCTGGCCACCTGTCAGAATCCCATTCTTTC...TCTTTCCCTTGGTGGCTCTGAGCCTGGCCTAGTTATCCTCAGGAGGCTAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGAGGAAATTAGTCCAGCACCTCTTTGATGAGCAGCTCCTTGAGGCTGGGACGGGCAATGGTTTCTaGAGTAAAGTTCCGGCGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DRRKLVQHLFDEQLLEAGTGNGF*SKVPAQ Trigger: CTGCGCCGGAACTTTACTGCAGAAACCATTGCCCGT...CCCAGCCTCAAGGAGCTGCTCATCAAAGAGGTGCTGGACTAATTTCCTCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCTAAAGTTCAAAGGCCCTGCTaGGACGGGCAATGGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RCQRVSYSERCLARPGAKVQRPC*DGQWFL Trigger: CAGAAACCATTGCCCGTCGCAGCAGGGCCTTTGAAC...TTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGACTATAATAGGCTCACACAGGGGCACTTGGCACTTTGGAATCATGATGTTCCCTGTCCCCTAACCTaGGCCAGCCTGTCTCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GDYNRLTQGHLALWNHDVPCPLT*ASLSPR Trigger: CCTAGGAGACAGGCTGGCCCAGGTTAGGGGACAGGG...AACATCATGATTCCAAAGTGCCAAGTGCCCCTGTGTGAGCCTATTATAGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGGAAAGATAGAGAAAGGAGGCCACACACTTTGAGGGCTCTAGATCCTCTCAGGCTGAAGAGCCCATaGCAAGACTTCCTCCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QGKDRERRPHTLRALDPLRLKSP*QDFLLV Trigger: CACCAGGAGGAAGTCTTGGCATGGGCTCTTCAGCCT...GAGAGGATCTAGAGCCCTCAAAGTGTGTGGCCTCCTTTCTCTATCTTTCCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGGCTGCAGACTCTTTCTaGAACTACTCAATAGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QPKPARSPVWHNKVPLSLAADSF*NYSIGS Trigger: GGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCAGC...CAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCGCAGGATTCGTGACCTTGAAGTTAGGACACTCAGTCAGCTTTGGCCTGATCGCCAAGACTTCCTCCTaGTGTTATCCTAGGGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: CAGFVTLKLGHSVSFGLIAKTSS*CYPRVT Trigger: GGTTACCCTAGGATAACACCAGGAGGAAGTCTTGGC...GATCAGGCCAAAGCTGACTGAGTGTCCTAACTTCAAGGTCACGAATCCTGCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGTCTGCTTGGCCAAGCCTTTGGAGACTTGTCAGAGCCCCTCTGATCTTTGGGCACTTGGCACTTTaGAATCATGATGTTCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: WQSAWPSLWRLVRAPLIFGHLAL*NHDVPV Trigger: CACTGGAACATCATGATTCCAAAGTGCCAAGTGCCC...AAAGATCAGAGGGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGTGAAGTTAGGTGTGGAATTTTCCACTTGCGGCCTCACGTGGACACTCAACTCAAAAGAGGAAACTaGGGGCCACTGAGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SSEVRCGIFHLRPHVDTQLKRGN*GPLRPQ Trigger: CTGTGGCCTCAGTGGCCCCCAGTTTCCTCTTTTGAG...TTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTTCACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CAA 90 bp | ATCCTGACCCATGCCACTGGGTCTCAATACTGTGTCCTGCTGCGGTaGACAGAAACCCACAGGGTACAGAAAGAAACACACATCAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ILTHATGSQYCVLLR*TETHRVQKETHISS Trigger: AGAACTGATGTGTGTTTCTTTCTGTACCCTGTGGGTTTCTGTCAACCGCAGCAGGACACAGTATTGAGACCCAGTGGCATGGGTCAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CAA 90 bp | CGCCTGGCCTCATTTACCTCCTATTATAATCCCATGTATTGCCTATaGCTCAAAAGAGGAAACTGGGGGCCACTGAGGCCACAGAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: RLASFTSYYNPMYCL*LKRGNWGPLRPQNP Trigger: TGGGTTCTGTGGCCTCAGTGGCCCCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGATTATAATAGGAGGTAAATGAGGCCAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTGAAGTTAGGTGTGGAATTTTCCACTTGCGGCCTCACGTGGACACTCAAAACATCCTTTTATAACTaGATGGCCACGACCCCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: QVKLGVEFSTCGLTWTLKTSFYN*MATTPA Trigger: GGCGGGGGTCGTGGCCATGCAGTTATAAAAGGATGT...TTTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTTCACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTGAAGTTAGGTGTGGAATTTTCCACTTGCGGCCTCACGTGGACACTCAAAACCCATCTTCTCATCTaGTCTCAGTTCCCCCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QVKLGVEFSTCGLTWTLKTHLLI*SQFPQV Trigger: CACCTGGGGGAACTGAGACCAGATGAGAAGATGGGT...TTTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTTCACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAGTTAGGTGTGGAATTTTCCACTTGCGGCCTCACGTGGACACTCAAATGCAGGTTTCCCTGCGCCTaGCCTCATTTACCTCCTATT | + |
|
Preference number: 2 (lower is better) Translates to: VKLGVEFSTCGLTWTLKCRFPCA*PHLPPI Trigger: AATAGGAGGTAAATGAGGCCAGGCGCAGGGAAACCT...GCATTTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGTGAAGTTAGGTGTGGAATTTTCCACTTGCGGCCTCACGTGGACACTCAAGAGGACGTGTTCAGTTaGCACCCATCTTCTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSEVRCGIFHLRPHVDTQEDVFS*HPSSHL Trigger: CAGATGAGAAGATGGGTGTCAACTGAACACGTCCTC...TTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTTCACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCGTAGTTAGCCTTGAACTTGGGGGCAGTCTTATTGCTTCAGCCTTTCAAGTCCTTAATCCTGACCCATaGCACTGGGTCTCAATACTG | + |
|
Preference number: 2 (lower is better) Translates to: AVVSLELGGSLIASAFQVLNPDP*HWVSIL Trigger: CAGTATTGAGACCCAGTGGCATGGGTCAGGATTAAG...GACTTGAAAGGCTGAAGCAATAAGACTGCCCCCAAGTTCAAGGCTAACTACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGAAAGATAGAGAAAGGAGGCCACACACTTTGAGGGCTCTAGATCCTCTCGCTGCAGACTCTTTCTaGAACTACTCAATAGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGKDRERRPHTLRALDPLAADSF*NYSIGS Trigger: GGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCAGC...GAGAGGATCTAGAGCCCTCAAAGTGTGTGGCCTCCTTTCTCTATCTTTCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCATGTATTGCCTATTGCTCAAAAGAGGAAACTGGGGGCCACTGAGGCCAGAATCAAGACTGGTCTaGATCCAAAGCCCATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NPMYCLLLKRGNWGPLRPESRLV*IQSPFP Trigger: AGGAAATGGGCTTTGGATCCAGACCAGTCTTGATTC...TGGCCTCAGTGGCCCCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCGTAGTTAGCCTTGAACTTGGGGGCAGTCTTATTGCTTCAGCCTTTCAAGTCCCATGTATTGCCTATTaGTCAAAAGAGGAAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AVVSLELGGSLIASAFQVPCIAY*SKEETG Trigger: CCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGG...GACTTGAAAGGCTGAAGCAATAAGACTGCCCCCAAGTTCAAGGCTAACTACGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGAAAGATAGAGAAAGGAGGCCACACACTTTGAGGGCTCTAGATCCTCTCTGGTTTAGAGGCCCATaGATACAGAGACATACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: QGKDRERRPHTLRALDPLWFRGP*IQRHTD Trigger: ATCAGTATGTCTCTGTATCCATGGGCCTCTAAACCA...GAGAGGATCTAGAGCCCTCAAAGTGTGTGGCCTCCTTTCTCTATCTTTCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR GCA 90 bp | TTACCTCCTATTATAATCCCATGTATTGCCTATTGCTCAAAAGAGGAAACTGGGCCGCCCCAAAATCTGTaGTATTTCCTTTCTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LPPIIIPCIAYCSKEETGPPQNL*YFLSLS Trigger: GCTGAGAGAAAGGAAATAGCACAGATTTTGGGGCGG...CCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGATTATAATAGGAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGATCTAAATATGTAGCCGTAGTTAGCCTTGAACTTGGGGGCAGTCTTATTACGTGGACACTCAAATaGTTCAGATTTTCAAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: TGSKYVAVVSLELGGSLITWTLK*FRFSSI Trigger: AATGCTTGAAAATCTGAAGCATTTGAGTGTCCACGT...AATAAGACTGCCCCCAAGTTCAAGGCTAACTACGGCTACATATTTAGATCCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR TCA 72 bp | CTGCAGGCTCGGGCTTCCCCGGGATCCTCCAGCTCCTaGTGGCACACGGCCAGCCCAGCCAGAGTCAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQARASPGSSSS*WHTASPARVNR Trigger: CCTGTTGACTCTGGCTGGGCTGGCCGTGTGCCATCAGGAGCTGGAGGATCCCGGGGAAGCCCGAGCCTGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | GGACGGTCTGGGCCAGATGGGGTGCCCAACTGGGTCTaGAGCTGCCAGGCGTTGGCCCACAATGCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRSGPDGVPNWV*SCQALAHNARA Trigger: GGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 72 bp | TCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATaGGGTCCTTGCTGTGACCTGTGCCCAGGAGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRAGAWAAVASG*GPCCDLCPGGC Trigger: ACACCCTCCTGGGCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | ACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTaGCGTCGGGATGGGGTCCTTGCTGTGACCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGGSRGLVHGRL*RRDGVLAVTCA Trigger: GGCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | CACGGCCAGCCCAGCCAGAGTCAACAGGGGACGGTCTaGGCCAGATGGGGTGCCCAACTGGGTCTGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGQPSQSQQGTV*ARWGAQLGLQL Trigger: CAGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGGCTGGGCTGGCCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 72 bp | CCCAGCCAGAGTCAACAGGGGACGGTCTGGGCCAGATaGGGTGCCCAACTGGGTCTGCAGCTGCCAGGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: PSQSQQGTVWAR*GAQLGLQLPGV Trigger: AACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | CCTTCTCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTaGATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSPCLQVALEGW*MGGCGVGMGSL Trigger: CAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR GCA 72 bp | TGTGCCCGCCGCAACTCGGGCAGCACAAAGAAGTCCTaGAGGTCCGGAGCTTGGCGTAGCTCTGGCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CARRNSGSTKKS*RSGAWRSSGTA Trigger: GGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCAGGACTTCTTTGTGCTGCCCGAGTTGCGGCGGGCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | TCTGGGCCAGATGGGGTGCCCAACTGGGTCTGCAGCTaGCAGGCGTTGGCCCACAATGCCAGAGCCTCACGA | + |
|
Preference number: 3 (lower is better) Translates to: SGPDGVPNWVCS*QALAHNARASR Trigger: TCGTGAGGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 72 bp | TCACCTTCTCCTTGCTTACAGGTGGCTCTCGAGGGCTaGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPSPCLQVALEG*CMGGCGVGMGS Trigger: GGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | GTAGAGGTAAGGCCTGCTTCCTGTAGTGCCTGGAGCTaGGCCTCCGACTGCCGTTTGTCCAGGCCCAGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: VEVRPASCSAWS*ASDCRLSRPRR Trigger: GCGCCTGGGCCTGGACAAACGGCAGTCGGAGGCCCAGCTCCAGGCACTACAGGAAGCAGGCCTTACCTCTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 72 bp | GGTGGGGTAGAGGTAAGGCCTGCTTCCTGTAGTGCCTaGAGCTGGGCCTCCGACTGCCGTTTGTCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GGVEVRPASCSA*SWASDCRLSRP Trigger: GGGCCTGGACAAACGGCAGTCGGAGGCCCAGCTCCAGGCACTACAGGAAGCAGGCCTTACCTCTACCCCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 72 bp | AAGCAGGGGCCATCTCACCTTCTCCTTGCTTACAGGTaGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KQGPSHLLLAYR*LSRAGAWAAVA Trigger: CGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | GGCGCAGGCGCTTACGGGGAAAGGAGATGGCAGACATaGGGCCCCGGAATTGCCGCTGCAGGTTTCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GAGAYGERRWQT*GPGIAAAGFCA Trigger: TGCACAGAAACCTGCAGCGGCAATTCCGGGGCCCCATGTCTGCCATCTCCTTTCCCCGTAAGCGCCTGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGATAAAGACCAGTGCAGGTGAGGCTCTGTGCCCGCCGCAACTCGGGCAGCACCATGGGGCCCCGGAATaGCCGCTGCAGGTTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TIKTSAGEALCPPQLGQHHGAPE*PLQVSV Trigger: CACAGAAACCTGCAGCGGCAATTCCGGGGCCCCATG...GTGCTGCCCGAGTTGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTTATCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCGGACATGGGCCTCAAGAAAGGGTGCCAGGAAAGGATGGGGTCTCTTGTCCCTGCAGCTGCCAGGCGTaGGCCCACAATGCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGHGPQERVPGKDGVSCPCSCQA*AHNARA Trigger: GGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCA...GGGACAAGAGACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCCCATGTCCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | GCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGTaGCCAGGAGGGTGTGATCCGATTGAAGCCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AVASGWGPCCDL*PGGCDPIEASG Trigger: ACCTGAGGCTTCAATCGGATCACACCCTCCTGGGCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | TCCGGAGCTTGGCGTAGCTCTGGCACTGCCTGCAGGTaGCCCAAAAACTGTTCAAAGGCCCTGCTGCGACGG | + |
|
Preference number: 3 (lower is better) Translates to: SGAWRSSGTACR*PKNCSKALLRR Trigger: CCGTCGCAGCAGGGCCTTTGAACAGTTTTTGGGCCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | GCTTGTGCTGAAGCAGGGGCCATCTCACCTTCTCCTTaGTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ACAEAGAISPSP*LQVALEGWCMG Trigger: GCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 72 bp | GACATGGGGCCCCGGAATTGCCGCTGCAGGTTTCTGTaGAGCCGCTCAAAGTCCGAGTATCGGCGAGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: DMGPRNCRCRFL*SRSKSEYRREI Trigger: GATCTCTCGCCGATACTCGGACTTTGAGCGGCTGCACAGAAACCTGCAGCGGCAATTCCGGGGCCCCATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | TGCAGGTCCGGAGCTTGGCGTAGCTCTGGCACTGCCTaGAGGTGGCCCAAAAACTGTTCAAAGGCCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CRSGAWRSSGTA*RWPKNCSKALL Trigger: CAGCAGGGCCTTTGAACAGTTTTTGGGCCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 72 bp | ATGGGGTGCCCAACTGGGTCTGCAGCTGCCAGGCGTTaGCCCACAATGCCAGAGCCTCACGATAAAGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: MGCPTGSAAARR*PTMPEPHDKDQ Trigger: CTGGTCTTTATCGTGAGGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR TCA 72 bp | ACAATGCCAGAGCCTCACGATAAAGACCAGTGCAGGTaGGGCTCTGTGCCCGCCGCAACTCGGGCAGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: TMPEPHDKDQCR*GSVPAATRAAQ Trigger: TTGTGCTGCCCGAGTTGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTTATCGTGAGGCTCTGGCATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | AGCCTCACGATAAAGACCAGTGCAGGTGAGGCTCTGTaGCCGCCGCAACTCGGGCAGCACAAAGAAGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLTIKTSAGEAL*PPQLGQHKEVL Trigger: CAGGACTTCTTTGTGCTGCCCGAGTTGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTTATCGTGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | CAACTGGGTCTGCAGCTGCCAGGCGTTGGCCCACAATaGCAGAGCCTCACGATAAAGACCAGTGCAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QLGLQLPGVGPQ*QSLTIKTSAGE Trigger: CTCACCTGCACTGGTCTTTATCGTGAGGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCAGACCCAGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGCCCCTCTGATCTTTTaGAGAAGTGAGCAGATACGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLTGGSRGLVHGRLWRRAPLIF*RSEQIR Trigger: ACGTATCTGCTCACTTCTCAAAAAGATCAGAGGGGC...CCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 72 bp | AAGGAGATGGCAGACATGGGGCCCCGGAATTGCCGCTaGAGGTTTCTGTGCAGCCGCTCAAAGTCCGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KEMADMGPRNCR*RFLCSRSKSEY Trigger: ATACTCGGACTTTGAGCGGCTGCACAGAAACCTGCAGCGGCAATTCCGGGGCCCCATGTCTGCCATCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR GCA 72 bp | CTGTTCAAAGGCCCTGCTGCGACGGGCAATGGTTTCTaGAGTAAAGTTCCGGCGCAGGCGCTTACGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LFKGPAATGNGF*SKVPAQALTGK Trigger: TTTCCCCGTAAGCGCCTGCGCCGGAACTTTACTGCAGAAACCATTGCCCGTCGCAGCAGGGCCTTTGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| 3UTR CCA 72 bp | GATTCTGACAGGTGGCCAGAGATGTGGCAGTCTGCTTaGCCAAGCCTTTGGAGACTTGTCAGAGCCCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DSDRWPEMWQSA*PSLWRLVRAPL Trigger: CAGAGGGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGTCACCTGAAGCTAGCCTCCTGAGGATAACTAGGCCAGGCTCAGAGCCAATACTGATTCTGACCTaGGCCACAGCCTCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AVSPEASLLRITRPGSEPILILT*ATASSC Trigger: ACAGCTGGAGGCTGTGGCCAAGGTCAGAATCAGTAT...TGGCTCTGAGCCTGGCCTAGTTATCCTCAGGAGGCTAGCTTCAGGTGACACAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 72 bp | ATTCGTGACCTTGAAGTTAGGACACTCAGTCAGCTTTaGCCTGATCCTCGGGGCCGAGTTCCTGAGCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IRDLEVRTLSQL*PDPRGRVPEPG Trigger: ACCAGGCTCAGGAACTCGGCCCCGAGGATCAGGCCAAAGCTGACTGAGTGTCCTAACTTCAAGGTCACGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 72 bp | AATCCCATGTATTGCCTATTGCTCAAAAGAGGAAACTaGGGGCCACTGAGGCCACAGAACCCACCCAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: NPMYCLLLKRGN*GPLRPQNPPKG Trigger: CCCCTTGGGTGGGTTCTGTGGCCTCAGTGGCCCCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR TCA 72 bp | TGTGTCAGATCCTTTGCAGGCAAAGCACGCTTGTGCTaGAGCAGGGGCCATCTCACCTTCTCCTTGCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: CVRSFAGKARLC*SRGHLTFSLLT Trigger: TGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACAAGCGTGCTTTGCCTGCAAAGGATCTGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 72 bp | AGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATaGCTGGCTCGGCCTGGGGCTAAAAGGACTTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLRCQRVSYSER*LARPGAKRTLH Trigger: GTGCAAAGTCCTTTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | CCCCCGGTGACTATAATAGGCTCACACAGGGGCACTTaGCACTTTGGAATCATGATGTTCCAGTGTGCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPVTIIGSHRGT*HFGIMMFQCAV Trigger: AACCGCACACTGGAACATCATGATTCCAAAGTGCCAAGTGCCCCTGTGTGAGCCTATTATAGTCACCGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 72 bp | TGGCCAGAGATGTGGCAGTCTGCTTGGCCAAGCCTTTaGAGACTTGTCAGAGCCCCTCTGATCTTTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: WPEMWQSAWPSL*RLVRAPLIFLR Trigger: TCTCAAAAAGATCAGAGGGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CCA 72 bp | AGGAAAGAATGGGATTCTGACAGGTGGCCAGAGATGTaGCAGTCTGCTTGGCCAAGCCTTTGGAGACTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RKEWDSDRWPEM*QSAWPSLWRLV Trigger: GACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGAATCCCATTCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGATACTGATTCTGACCTaGGCCACAGCCTCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGLKGLCTAISEAGVTVEILILT*ATASSC Trigger: ACAGCTGGAGGCTGTGGCCAAGGTCAGAATCAGTAT...CTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR GCA 72 bp | GTCAGGAAAGGGTTACTCGAGTACAGACACCATCGCTaGGCAGGATTCGTGACCTTGAAGTTAGGACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: VRKGLLEYRHHR*AGFVTLKLGHS Trigger: TGAGTGTCCTAACTTCAAGGTCACGAATCCTGCGCAGCGATGGTGTCTGTACTCGAGTAACCCTTTCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 72 bp | TCTGGATCCAAAGCCCATTTCCTTAATCCTGACCCATaGCACTGGGTCTCAATACTGTGTCCTGCTGCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SGSKAHFLNPDP*HWVSILCPAAV Trigger: AACCGCAGCAGGACACAGTATTGAGACCCAGTGGCATGGGTCAGGATTAAGGAAATGGGCTTTGGATCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CCA 72 bp | TGTGTGTCAGAAAGGAAAGAATGGGATTCTGACAGGTaGCCAGAGATGTGGCAGTCTGCTTGGCCAAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: CVSERKEWDSDR*PEMWQSAWPSL Trigger: AAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCCACCTGTCAGAATCCCATTCTTTCCTTTCTGACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR TCA 72 bp | ACTTTAGTGTCATTGTCTGGAAAACAGGACAGGGAGTaGCGCTCACACCCTGTGGCTAAAGCAGACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TLVSLSGKQDRE*RSHPVAKADLS Trigger: ACTGAGGTCTGCTTTAGCCACAGGGTGTGAGCGTCACTCCCTGTCCTGTTTTCCAGACAATGACACTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR TCA 72 bp | ATGCCACTGGGTCTCAATACTGTGTCCTGCTGCGGTTaGCAGAAACCCACAGGGTACAGAAAGAAACACACA | + |
|
Preference number: 3 (lower is better) Translates to: MPLGLNTVSCCG*QKPTGYRKKHT Trigger: TGTGTGTTTCTTTCTGTACCCTGTGGGTTTCTGTCAACCGCAGCAGGACACAGTATTGAGACCCAGTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CCA 72 bp | AGTCGCAGTCCCCAGCCCTTCACCAAACTGTTTCACTaGTTTAGAGGCCCATGGATACAGAGACATACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SRSPQPFTKLFH*FRGPWIQRHTD Trigger: ATCAGTATGTCTCTGTATCCATGGGCCTCTAAACCAGTGAAACAGTTTGGTGAAGGGCTGGGGACTGCGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | GACTATAATAGGCTCACACAGGGGCACTTGGCACTTTaGAATCATGATGTTCCAGTGTGCGGTTGTATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DYNRLTQGHLAL*NHDVPVCGCMG Trigger: CCCCATACAACCGCACACTGGAACATCATGATTCCAAAGTGCCAAGTGCCCCTGTGTGAGCCTATTATAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR GCA 72 bp | GTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTaGAGACTCTTTCTGGAACTACTCAATAGGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLSGIIKFPSVC*RLFLELLNRLP Trigger: TGGGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| 3UTR GCA 72 bp | GGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTaGTGCAGACTCTTTCTGGAACTACTCAATAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GVLSGIIKFPSV*CRLFLELLNRL Trigger: GAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| 3UTR CCA 72 bp | ACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAGCTaGGCTTCCTGCCTCTTACATACAATAAAGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: TAISEAGVTVES*ASCLLHTIKRL Trigger: CAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR GCA 72 bp | CTGGCCTCATTTACCTCCTATTATAATCCCATGTATTaGCTATTGCTCAAAAGAGGAAACTGGGGGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LASFTSYYNPMY*LLLKRGNWGPL Trigger: CAGTGGCCCCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGATTATAATAGGAGGTAAATGAGGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR GCA 72 bp | AATCTATCACAGTGCCAGACAATGCTAAGGTTTCCCTaGGCCTGGCCTCATTTACCTCCTATTATAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: NLSQCQTMLRFP*AWPHLPPIIIP Trigger: TGGGATTATAATAGGAGGTAAATGAGGCCAGGCGCAGGGAAACCTTAGCATTGTCTGGCACTGTGATAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR GCA 72 bp | TTGACACTATACAGCTACAGTTTTAATCTATCACAGTaGCAGACAATGCTAAGGTTTCCCTGCGCCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTLYSYSFNLSQ*QTMLRFPCAWP Trigger: AGGCCAGGCGCAGGGAAACCTTAGCATTGTCTGGCACTGTGATAGATTAAAACTGTAGCTGTATAGTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CCA 72 bp | TCACAGTGCCAGACAATGCTAAGGTTTCCCTGCGCCTaGCCTCATTTACCTCCTATTATAATCCCATGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SQCQTMLRFPCA*PHLPPIIIPCI Trigger: AATACATGGGATTATAATAGGAGGTAAATGAGGCCAGGCGCAGGGAAACCTTAGCATTGTCTGGCACTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR GCA 72 bp | ACATATCAAGTGAAGTTAGGTGTGGAATTTTCCACTTaGGGCCTCACGTGGACACTCAAATGCTTCAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: TYQVKLGVEFST*GLTWTLKCFRF Trigger: AAATCTGAAGCATTTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTTCACTTGATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CCA 72 bp | AAGTTAGGTGTGGAATTTTCCACTTGCGGCCTCACGTaGACACTCAAATGCTTCAGATTTTCAAGCATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLGVEFSTCGLT*TLKCFRFSSIS Trigger: TGAAATGCTTGAAAATCTGAAGCATTTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR TCA 72 bp | CACATTCTCAGTTTTAGAGAAACTAAGTCATTTGCCTaGGGACGTGTTCAGTTGACACCCATCTTCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HILSFRETKSFA*GRVQLTPIFSS Trigger: AGATGAGAAGATGGGTGTCAACTGAACACGTCCTCAGGCAAATGACTTAGTTTCTCTAAAACTGAGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGTGCCCAACTGGGTCTaGAGCTGCCAGGCGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRAGAWAAVASGWGPCCVPNWV*SCQALA Trigger: GGCCAACGCCTGGCAGCTGCAGACCCAGTTGGGCAC...ACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | CTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTAAAGACCAGTGCAGGTaGGGCTCTGTGCCCGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRAGAWAAVASGWGPCCKDQCR*GSVPAA Trigger: TGCGGCGGGCACAGAGCCTCACCTGCACTGGTCTTT...ACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGGTCCGGAGCTTGGCGTAGCTCTGGCACTGCCTGCAGGTGGCCCAAAAGAGCTCTCAGGGAACTaGTCGGCCTCTGGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAGPELGVALALPAGGPKELSGN*SASGPA Trigger: GGCGGGCCCAGAGGCCGAGCAGTTCCCTGAGAGCTC...TTTTGGGCCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS-3UTR GCA 90 bp | TCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGGGCCAGATGGGGTaGCCAACTGGGTCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGAWAAVASGWGPCCDLGQMG*PTGSAA Trigger: AGCTGCAGACCCAGTTGGGCACCCCATCTGGCCCAG...GTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | CTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTCTTGAGGCTGGGCGGTaGGGTAGAGGTAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRAGAWAAVASGWGPCCLEAGR*GRGKAC Trigger: GCAGGCCTTACCTCTACCCCACCGCCCAGCCTCAAG...ACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | CTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTTGGCGGGCCAGGAGTTaGCTGCTCCGTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRAGAWAAVASGWGPCCWRARS*LLRCPS Trigger: TGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCA...ACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGCCCCGGAATTGCCGCTaGAGGTTTCTGTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTGGSRGLVHGRLWRRPRNCR*RFLCSR Trigger: GCGGCTGCACAGAAACCTGCAGCGGCAATTCCGGGG...CCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAGATGTGGCAGTCTGCTTGGCCAAGCCTTTGGAGACTTGTCAGAGCCCTGGCTGGCGATCTGGTaGCCCTGGGCCCATCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQRCGSLLGQAFGDLSEPWLAIW*PWAHHG Trigger: GCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCA...GGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | TTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCTCAGCCCCTGTCCCCTGCAGGGCCTTCTCACTaGAGGCTCGGGCTTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FWNYSIGSQLLCPQPLSPAGPSH*RLGLPR Trigger: CCGGGGAAGCCCGAGCCTGCAGTGAGAAGGCCCTGC...AGGGGACAGGGGCTGAGGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGAAGCAGGGGCCATCTCACCTTCTCCTTGCTTACAGGTGGCTCTCGAGGCGATCTGGTGGCCCTaGGCCCATCACGGCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CAEAGAISPSPCLQVALEAIWWP*AHHGEG Trigger: ACCCTCGCCGTGATGGGCCCAGGGCCACCAGATCGC...CTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGAAGCAGGGGCCATCTCACCTTCTCCTTGCTTACAGGTGGCTCTCGAGGGCTGGCTGGCGATCTaGTGGCCCTGGGCCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: CAEAGAISPSPCLQVALEGWLAI*WPWAHH Trigger: GTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCC...CTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | CCAGAGTCAACAGGGGACGGTCTGGGCCAGATGGGGTGCCCAACTGGGTCTGCATGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PESTGDGLGQMGCPTGSAWREGL*QHWRWS Trigger: TGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCA...TGCAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTGACTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGCCCAGGAGGGTGTGATCCGATTGAAGCCTCAGGTGTCAGAGAGTAAGGAGCTCTCAGGGAACTaGTCGGCCTCTGGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TCAQEGVIRLKPQVSESKELSGN*SASGPA Trigger: GGCGGGCCCAGAGGCCGAGCAGTTCCCTGAGAGCTC...CTTACTCTCTGACACCTGAGGCTTCAATCGGATCACACCCTCCTGGGCACAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTGTCCCCTAACCTGGGCCAGCCTGTCTCCTAGGCATGGCCTTAAGACATTGTCCCCCAGCAGCTaGAGGGCCTTCTCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPLTWASLSPRHGLKTLSPSS*RAFSLQ Trigger: CTGCAGTGAGAAGGCCCTGCAGCTGCTGGGGGACAA...TGTCTTAAGGCCATGCCTAGGAGACAGGCTGGCCCAGGTTAGGGGACAGGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTCACCTGAAGCTAGCCTCCTGAGGATAACTAGGCCAGGCTCAGAGCCAAGCTGGGCCTCCGACTaGCGTTTGTCCAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVSPEASLLRITRPGSEPSWASD*RLSRPR Trigger: CCTGGGCCTGGACAAACGGCAGTCGGAGGCCCAGCT...TGGCTCTGAGCCTGGCCTAGTTATCCTCAGGAGGCTAGCTTCAGGTGACACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGCTGTGTCACCTGAAGCTAGCCTCCTGAGGATAACTAGGCCAGGCTCAGCGAGAGATCTGGGCTaGCTGGCGATCTGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSAVSPEASLLRITRPGSARDLG*LAIWWP Trigger: GGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGC...TGAGCCTGGCCTAGTTATCCTCAGGAGGCTAGCTTCAGGTGACACAGCAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAGATGTGGCAGTCTGCTTGGCCAAGCCTTTGGAGACTTGTCAGAGCCCTGCAGGTCCGGAGCTTaGCGTAGCTCTGGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQRCGSLLGQAFGDLSEPCRSGA*RSSGTA Trigger: GGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCA...GGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | AGCCCCTGTCCCCTAACCTGGGCCAGCCTGTCTCCTAGGCATGGCCTTAAGACAATCGTCCTCCAGCTCTaGGCTCTCAGGGAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPCPLTWASLSPRHGLKTIVLQL*ALRELL Trigger: GAGCAGTTCCCTGAGAGCTCAGAGCTGGAGGACGAT...TGTCTTAAGGCCATGCCTAGGAGACAGGCTGGCCCAGGTTAGGGGACAGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCATCTCACCTTCTCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATAGGAGATGGCAGACATaGGGCCCCGGAATTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGHLTFSLLTGGSRGLVHRRWQT*GPGIAA Trigger: AGCGGCAATTCCGGGGCCCCATGTCTGCCATCTCCT...ATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | TTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCTCAGCCCCTGTCCCCTACGGTCTGGGCCAGATaGGGTGCCCAACTGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FWNYSIGSQLLCPQPLSPTVWAR*GAQLGL Trigger: CAGACCCAGTTGGGCACCCCATCTGGCCCAGACCGT...AGGGGACAGGGGCTGAGGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAGATGTGGCAGTCTGCTTGGCCAAGCCTTTGGAGACTTGTCAGAGCCCCAGGAGAGCCGGACATaGGCCTCAAGAAAGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQRCGSLLGQAFGDLSEPQESRT*ASRKGA Trigger: GGCACCCTTTCTTGAGGCCCATGTCCGGCTCTCCTG...GGGCTCTGACAAGTCTCCAAAGGCTTGGCCAAGCAGACTGCCACATCTCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCATCTCACCTTCTCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATATCGTCCTCCAGCTCTaGGCTCTCAGGGAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGHLTFSLLTGGSRGLVHIVLQL*ALRELL Trigger: GAGCAGTTCCCTGAGAGCTCAGAGCTGGAGGACGAT...ATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| CDS-3UTR TCA 90 bp | TGCCGCTGCAGGTTTCTGTGCAGCCGCTCAAAGTCCGAGTATCGGCGAGAGATCATCGTCCTCCAGCTCTaGGCTCTCAGGGAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRCRFLCSRSKSEYRREIIVLQL*ALRELL Trigger: GAGCAGTTCCCTGAGAGCTCAGAGCTGGAGGACGAT...GATCTCTCGCCGATACTCGGACTTTGAGCGGCTGCACAGAAACCTGCAGCGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS-3UTR GCA 90 bp | TGCGCAGGATTCGTGACCTTGAAGTTAGGACACTCAGTCAGCTTTGGCCTGATCGAGCTCTCAGGGAACTaGTCGGCCTCTGGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CAGFVTLKLGHSVSFGLIELSGN*SASGPA Trigger: GGCGGGCCCAGAGGCCGAGCAGTTCCCTGAGAGCTC...GATCAGGCCAAAGCTGACTGAGTGTCCTAACTTCAAGGTCACGAATCCTGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCTAAAGCAGGTGAGGCTCTGTaGCCGCCGCAACTCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCQRVSYSERCLARPGAKAGEAL*PPQLGQ Trigger: CTGCCCGAGTTGCGGCGGGCACAGAGCCTCACCTGC...TTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | GTCTGCTGCAGACTCTTTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCGAGATCTGGGCTGGCTaGCGATCTGGTGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCCRLFLELLNRLPAAVSEIWAG*RSGGPG Trigger: CCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTC...GGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCAGCAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGCAGACTCGATGGGGTGCCCAACTaGGTCTGCAGCTGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVLSGIIKFPSVCCRLDGVPN*VCSCQA Trigger: CGCCTGGCAGCTGCAGACCCAGTTGGGCACCCCATC...GAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCTAAAGGATCCTCCAGCTCCTaGTGGCACACGGCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCQRVSYSERCLARPGAKGSSSS*WHTASP Trigger: TGGGCTGGCCGTGTGCCATCAGGAGCTGGAGGATCC...TTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | GCCGTAGTTAGCCTTGAACTTGGGGGCAGTCTTATTGCTTCAGCCTTTCAAGTCGAGCTCTCAGGGAACTaGTCGGCCTCTGGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVVSLELGGSLIASAFQVELSGN*SASGPA Trigger: GGCGGGCCCAGAGGCCGAGCAGTTCCCTGAGAGCTC...GACTTGAAAGGCTGAAGCAATAAGACTGCCCCCAAGTTCAAGGCTAACTACGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTGTCCCCTAACCTGGGCCAGCCTGTCTCCTAGGCATGGCCTTAAGACATTTTTCCAGAAATCCTaGAGCTGGCGGGCCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPCPLTWASLSPRHGLKTFFQKS*SWRARS Trigger: ACTCCTGGCCCGCCAGCTGCAGGATTTCTGGAAAAA...TGTCTTAAGGCCATGCCTAGGAGACAGGCTGGCCCAGGTTAGGGGACAGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTGTCCCCTAACCTGGGCCAGCCTGTCTCCTAGGCATGGCCTTAAGACAACGGGCAATGGTTTCTaGAGTAAAGTTCCGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPLTWASLSPRHGLKTTGNGF*SKVPAQ Trigger: CTGCGCCGGAACTTTACTGCAGAAACCATTGCCCGT...TGTCTTAAGGCCATGCCTAGGAGACAGGCTGGCCCAGGTTAGGGGACAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTCACCTGAAGCTAGCCTCCTGAGGATAACTAGGCCAGGCTCAGAGCCATATCGGCGAGAGATCTaGGCTGGCTGGCGATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSPEASLLRITRPGSEPYRREI*AGWRSG Trigger: ACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATA...TGGCTCTGAGCCTGGCCTAGTTATCCTCAGGAGGCTAGCTTCAGGTGACACAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | CAGCCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTTGAGGCTGGGCGGTaGGGTAGAGGTAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPKPARSPVWHNKVPLSLLEAGR*GRGKAC Trigger: GCAGGCCTTACCTCTACCCCACCGCCCAGCCTCAAG...CAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 |
||
| 3UTR CAA 72 bp | GTTGTATGGGGACAGCTCTGCCCTGTGTCAGATCCTTaGCAGGCAAAGCACGCTTGTGCTGAAGCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVWGQLCPVSDP*QAKHACAEAGA Trigger: GGCCCCTGCTTCAGCACAAGCGTGCTTTGCCTGCAAAGGATCTGACACAGGGCAGAGCTGTCCCCATACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCTCAGCCCCTGTCCCCTGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLELLNRLPAAVSSAPVPWREGL*QHWRWS Trigger: TGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCA...GGGGACAGGGGCTGAGGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGAAGCAGGGGCCATCTCACCTTCTCCTTGCTTACAGGTGGCTCTCGAGTGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CAEAGAISPSPCLQVALEWREGL*QHWRWS Trigger: TGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCA...CTCGAGAGCCACCTGTAAGCAAGGAGAAGGTGAGATGGCCCCTGCTTCAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCTGCAGACTCTTTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCATGGGGCCCCGGAATTaGCGCTGCAGGTTTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCCRLFLELLNRLPAAVSMGPRN*RCRFLC Trigger: GCACAGAAACCTGCAGCGGCAATTCCGGGGCCCCAT...GGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCAGCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | AGGACAGGGAGTGACGCTCACACCCTGTGGCTAAAGCAGACCTCAGTGGGCTCTACTGTTCAAAGGCCCTaGTGCGACGGGCAATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTGSDAHTLWLKQTSVGSTVQRP*CDGQWF Trigger: AAACCATTGCCCGTCGCAGCAGGGCCTTTGAACAGT...AGAGCCCACTGAGGTCTGCTTTAGCCACAGGGTGTGAGCGTCACTCCCTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGGCAGCTGCCAGGCGTTaGCCCACAATGCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLKGLCTAISEAGVTVEAAARR*PTMPEP Trigger: AGGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGC...CTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | TGCAGACTCTTTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCTCAGCCGGTGCCAGGAAAGGATaGGGTCTCTTGTCCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CRLFLELLNRLPAAVSSAGARKG*GLLSPS Trigger: GCTGGGGGACAAGAGACCCCATCCTTTCCTGGCACC...GGCTGAGGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAAGATAGAGAAAGGAGGCCACACACTTTGAGGGCTCTAGATCCTCTCCAACAGGGGACGGTCTaGGCCAGATGGGGTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGKDRERRPHTLRALDPLQQGTV*ARWGAQ Trigger: TTGGGCACCCCATCTGGCCCAGACCGTCCCCTGTTG...GAGAGGATCTAGAGCCCTCAAAGTGTGTGGCCTCCTTTCTCTATCTTTCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CAA 72 bp | GAGGCCCATGGATACAGAGACATACTGATTCTGACCTaGGCCACAGCCTCCAGCTGTGGTAGGCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAHGYRDILILT*ATASSCGRLKS Trigger: GCTCTTCAGCCTACCACAGCTGGAGGCTGTGGCCAAGGTCAGAATCAGTATGTCTCTGTATCCATGGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| 3UTR CAA 72 bp | CACCAAGGGAAAGATAGAGAAAGGAGGCCACACACTTaGAGGGCTCTAGATCCTCTCAGGTGCACCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQGKDRERRPHT*RALDPLRCTLP Trigger: GGGGAGGGTGCACCTGAGAGGATCTAGAGCCCTCAAAGTGTGTGGCCTCCTTTCTCTATCTTTCCCTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | TCCCATGTATTGCCTATTGCTCAAAAGAGGAAACTGGGGGCCACTGAGGCCACAATCGTCCTCCAGCTCTaGGCTCTCAGGGAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHVLPIAQKRKLGATEATIVLQL*ALRELL Trigger: GAGCAGTTCCCTGAGAGCTCAGAGCTGGAGGACGAT...TGTGGCCTCAGTGGCCCCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGCAGATGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLGVLSGIIKFPSVCCRWREGL*QHWRWS Trigger: TGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCA...TCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCTAAAAGGCGCTGCAGGTTTCTGTaGAGCCGCTCAAAGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQRVSYSERCLARPGAKRRCRFL*SRSKSE Trigger: CTCGGACTTTGAGCGGCTGCACAGAAACCTGCAGCG...CCTTTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGCAGACTCGTTCAAAGGCCCTGCTaGGACGGGCAATGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVLSGIIKFPSVCCRLVQRPC*DGQWFL Trigger: CAGAAACCATTGCCCGTCGCAGCAGGGCCTTTGAAC...GAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGAGCACAAAGAAGTCCTaGAGGTCCGGAGCTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PKPARSPVWHNKVPLSLLSTKKS*RSGAWR Trigger: ACGCCAAGCTCCGGACCTGCAGGACTTCTTTGTGCT...CAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR GCA 90 bp | TGCAGACTCTTTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCTCAGCCGGCCTCAAGAAAGGGTaGCAGGAAAGGATGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRLFLELLNRLPAAVSSAGLKKG*QERMGS Trigger: AGACCCCATCCTTTCCTGGCACCCTTTCTTGAGGCC...GGCTGAGGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGCAGACTCGGCACTGCCTGCAGGTaGCCCAAAAACTGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVLSGIIKFPSVCCRLGTACR*PKNCSK Trigger: CTTTGAACAGTTTTTGGGCCACCTGCAGGCAGTGCC...GAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR TCA 90 bp | AAGCCACTGGTAAACACAGGGGATGTGAATCAAGACTGGTCTGGATCCAAAGCCTGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPLVNTGDVNQDWSGSKAWREGL*QHWRWS Trigger: TGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCA...GGCTTTGGATCCAGACCAGTCTTGATTCACATCCCCTGTGTTTACCAGTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR CCA 90 bp | GCCACTGGTAAACACAGGGGATGTGAATCAAGACTGGTCTGGATCCAAAGCCCACTGCTCAAGGGTTCCTaGAACCTCACTCACCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: ATGKHRGCESRLVWIQSPLLKGS*NLTHHV Trigger: TACGTGGTGAGTGAGGTTCCAGGAACCCTTGAGCAG...TGGGCTTTGGATCCAGACCAGTCTTGATTCACATCCCCTGTGTTTACCAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CAA 72 bp | CATGCCACTGGGTCTCAATACTGTGTCCTGCTGCGGTaGACAGAAACCCACAGGGTACAGAAAGAAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: HATGSQYCVLLR*TETHRVQKETH Trigger: GTGTGTTTCTTTCTGTACCCTGTGGGTTTCTGTCAACCGCAGCAGGACACAGTATTGAGACCCAGTGGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR GCA 90 bp | GGTGACTATAATAGGCTCACACAGGGGCACTTGGCACTTTGGAATCATGATGTTGGCGTTGGCCCACAATaGCAGAGCCTCACGATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDYNRLTQGHLALWNHDVGVGPQ*QSLTIK Trigger: CTTTATCGTGAGGCTCTGGCATTGTGGGCCAACGCC...AACATCATGATTCCAAAGTGCCAAGTGCCCCTGTGTGAGCCTATTATAGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| 3UTR CAA 72 bp | TCATTTACCTCCTATTATAATCCCATGTATTGCCTATaGCTCAAAAGAGGAAACTGGGGGCCACTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTSYYNPMYCL*LKRGNWGPLRP Trigger: TGGCCTCAGTGGCCCCCAGTTTCCTCTTTTGAGCAATAGGCAATACATGGGATTATAATAGGAGGTAAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| 3UTR CAA 72 bp | CACATATCAAGTGAAGTTAGGTGTGGAATTTTCCACTaGCGGCCTCACGTGGACACTCAAATGCTTCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: HISSEVRCGIFH*RPHVDTQMLQI Trigger: AATCTGAAGCATTTGAGTGTCCACGTGAGGCCGCAAGTGGAAAATTCCACACCTAACTTCACTTGATATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTGCTTACAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGCCTCCGACTGCCGTTaGTCCAGGCCCAGGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLTGGSRGLVHGRLWRRASDCR*SRPRRQ Trigger: CTGGCGCCTGGGCCTGGACAAACGGCAGTCGGAGGC...CCGACGCCACAGCCGCCCATGCACCAGCCCTCGAGAGCCACCTGTAAGCAAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CCA 90 bp | CGAGTATCGGCGAGAGATCTGGGCTGGCTGGCGATCTGGTGGCCCTaGGCCCATCACGGCGAGGGTGTAGAGCACGTACTTGGAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSARDLGWLAIWWP*AHHGEGVEHVLGGR Trigger: CCTCCCTCCAAGTACGTGCTCTACACCCTCGCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATACTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CCA 90 bp | TCTGTGCAGCCGCTCAAAGTCCGAGTATCGGCGAGAGATCTGGGCTaGCTGGCGATCTGGTGGCCCTGGGCCCATCACGGCGAGGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SVQPLKVRVSARDLG*LAIWWPWAHHGEGV Trigger: TACACCCTCGCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATACTCGGACTTTGAGCGGCTGCACAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CCA 90 bp | AGGTTTCTGTGCAGCCGCTCAAAGTCCGAGTATCGGCGAGAGATCTaGGCTGGCTGGCGATCTGGTGGCCCTGGGCCCATCACGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RFLCSRSKSEYRREI*AGWRSGGPGPITAR Trigger: CCTCGCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATACTCGGACTTTGAGCGGCTGCACAGAAACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CCA 90 bp | AAAGTCCGAGTATCGGCGAGAGATCTGGGCTGGCTGGCGATCTGGTaGCCCTGGGCCCATCACGGCGAGGGTGTAGAGCACGTACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KVRVSARDLGWLAIW*PWAHHGEGVEHVLG Trigger: TCCAAGTACGTGCTCTACACCCTCGCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATACTCGGACTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CCA 90 bp | CTCAAAGTCCGAGTATCGGCGAGAGATCTGGGCTGGCTGGCGATCTaGTGGCCCTGGGCCCATCACGGCGAGGGTGTAGAGCACGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: LKVRVSARDLGWLAI*WPWAHHGEGVEHVL Trigger: AAGTACGTGCTCTACACCCTCGCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATACTCGGACTTTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGGTCCGGAGCTTGGCGTAGCTCTGGCACTGCCTGCAGGTGGCCCAAAAGGCGAGGGTGTAGAGTaGGAGGGAGGGTCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PAGPELGVALALPAGGPKGEGVE*EGGSLT Trigger: TGTCAAAGACCCTCCCTCCAACTCTACACCCTCGCC...TTTTGGGCCACCTGCAGGCAGTGCCAGAGCTACGCCAAGCTCCGGACCTGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGTGCAGCTGCCAGGCGTaGGCCCACAATGCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPKPARSPVWHNKVPLSLCSCQA*AHNARA Trigger: GGCTCTGGCATTGTGGGCCAACGCCTGGCAGCTGCA...CAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCGACGGGCAATGGTTTCTGCAGTAAAGTTCCGGCGCAGGCGCTTACGGGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRRAMVSAVKFRRRRLRGSLTT*ALVTSK Trigger: CTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCC...CCGTAAGCGCCTGCGCCGGAACTTTACTGCAGAAACCATTGCCCGTCGCAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS-3UTR CAA 90 bp | GCAGACTCTTTCTGGAACTACTCAATAGGCTCCCAGCTGCTGTGTCCTCAGCCCTTGATGAGCAGCTCCTaGAGGCTGGGCGGTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ADSFWNYSIGSQLLCPQPLMSSS*RLGGGV Trigger: TACCCCACCGCCCAGCCTCAAGGAGCTGCTCATCAA...GGGCTGAGGACACAGCAGCTGGGAGCCTATTGAGTAGTTCCAGAAAGAGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 |
||
| CDS TCA 90 bp | TTCCGAGACTTTTTCCAGAAATCCTGCAGCTGGCGGGCCAGGAGTTaGCTGCTCCGTTGTCCATCAGGTGGGGGACTTCGTTCTGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FRDFFQKSCSWRARS*LLRCPSGGGLRSAS Trigger: AGACGCAGAACGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGATTTCTGGAAAAAGTCTCGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS GCA 90 bp | GAGACTTTTTCCAGAAATCCTGCAGCTGGCGGGCCAGGAGTTGACTaGTCCGTTGTCCATCAGGTGGGGGACTTCGTTCTGCGTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETFSRNPAAGGPGVD*SVVHQVGDFVLRLL Trigger: GAGAAGACGCAGAACGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGATTTCTGGAAAAAGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS-3UTR CAA 90 bp | CCAAAGCCTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGTTGATGAGCAGCTCCTaGAGGCTGGGCGGTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PKPARSPVWHNKVPLSLLLMSSS*RLGGGV Trigger: TACCCCACCGCCCAGCCTCAAGGAGCTGCTCATCAA...CAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAGGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 |
||
| CDS TCA 90 bp | GGGTTCCTGGAACCTCACTCACCACGTACTTGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFLEPHSPRTWREGL*QHWRWSPQRAASVE Trigger: TTCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGGTGAGTGAGGTTCCAGGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGATTCTGACCTTGGCCACAGCCTCCAGCTGTGGTAGGCTGAAGAGCCCAGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILILTLATASSCGRLKSPGSLTT*ALVTSK Trigger: CTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCC...TGGGCTCTTCAGCCTACCACAGCTGGAGGCTGTGGCCAAGGTCAGAATCAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056181.7 ENSMUST00000172577.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCGGAGTCCTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGCAGACTCGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGVLSGIIKFPSVCCRLGSLTT*ALVTSK Trigger: CTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCC...GAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAGGACTCCGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| CDS-3UTR CAA 90 bp | GGTGACTATAATAGGCTCACACAGGGGCACTTGGCACTTTGGAATCATGATGTTCATGGGGCCCCGGAATaGCCGCTGCAGGTTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GDYNRLTQGHLALWNHDVHGAPE*PLQVSV Trigger: CACAGAAACCTGCAGCGGCAATTCCGGGGCCCCATG...AACATCATGATTCCAAAGTGCCAAGTGCCCCTGTGTGAGCCTATTATAGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS-3UTR CAA 90 bp | GCCACTGGTAAACACAGGGGATGTGAATCAAGACTGGTCTGGATCCAAAGCCCATCACTCACCACGTACTaGGAGGGAGGGTCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ATGKHRGCESRLVWIQSPSLTTY*EGGSLT Trigger: TGTCAAAGACCCTCCCTCCAAGTACGTGGTGAGTGA...TGGGCTTTGGATCCAGACCAGTCTTGATTCACATCCCCTGTGTTTACCAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR CAA 90 bp | GACAATGCTAAGGTTTCCCTGCGCCTGGCCTCATTTACCTCCTATTATAATCCCGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DNAKVSLRLASFTSYYNPGSLTT*ALVTSK Trigger: CTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCC...GGGATTATAATAGGAGGTAAATGAGGCCAGGCGCAGGGAAACCTTAGCATTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGGCATAATAAAGTTCCCCTCAGTCTGCTGCAGACTCTTTCTGGAACTAGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSGIIKFPSVCCRLFLELGSLTT*ALVTSK Trigger: CTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCC...TAGTTCCAGAAAGAGTCTGCAGCAGACTGAGGGGAACTTTATTATGCCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056181.7 ENSMUST00000140519.2 ENSMUST00000172577.8 |
||
| CDS TCA 72 bp | GGAGGACAGGCCCTCGGCGTCATCGTCCTCCAGCTCTaGGCTCTCAGGGAACTGCTCGGCCTCTGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GGQALGVIVLQL*ALRELLGLWAR Trigger: GCGGGCCCAGAGGCCGAGCAGTTCCCTGAGAGCTCAGAGCTGGAGGACGATGACGCCGAGGGCCTGTCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS TCA 72 bp | ACTTCGTTCTGCGTCTTCTCCCGATGCCCCGTCTCCTaGGGGCGGCGAGTCGAGGCCCGCCTCGTCGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSFCVFSRCPVS*GRRVEARLVVL Trigger: GAGGACGACGAGGCGGGCCTCGACTCGCCGCCCTCAGGAGACGGGGCATCGGGAGAAGACGCAGAACGAAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS CCA 72 bp | GTATCGGCGAGAGATCTGGGCTGGCTGGCGATCTGGTaGCCCTGGGCCCATCACGGCGAGGGTGTAGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VSARDLGWLAIW*PWAHHGEGVEH Trigger: GTGCTCTACACCCTCGCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CCA 72 bp | CCGCTCAAAGTCCGAGTATCGGCGAGAGATCTGGGCTaGCTGGCGATCTGGTGGCCCTGGGCCCATCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLKVRVSARDLG*LAIWWPWAHHG Trigger: GCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGCCGATACTCGGACTTTGAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CCA 72 bp | GCGAGAGATCTGGGCTGGCTGGCGATCTGGTGGCCCTaGGCCCATCACGGCGAGGGTGTAGAGCACGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: ARDLGWLAIWWP*AHHGEGVEHVL Trigger: AAGTACGTGCTCTACACCCTCGCCGTGATGGGCCCAGGGCCACCAGATCGCCAGCCAGCCCAGATCTCTCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS CAA 72 bp | ATCCTGCAGCTGGCGGGCCAGGAGTTGACTGCTCCGTaGTCCATCAGGTGGGGGACTTCGTTCTGCGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILQLAGQELTAP*SIRWGTSFCVF Trigger: GAAGACGCAGAACGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS GCA 72 bp | TCCAGAAATCCTGCAGCTGGCGGGCCAGGAGTTGACTaGTCCGTTGTCCATCAGGTGGGGGACTTCGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRNPAAGGPGVD*SVVHQVGDFVL Trigger: CAGAACGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGATTTCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS CAA 72 bp | CACGGCGAGGGTGTAGAGCTGAGGCTCCTCACGTACTaGGAGGGAGGGTCTTTGACAACATTGGCGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HGEGVELRLLTY*EGGSLTTLALV Trigger: GACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGAGGAGCCTCAGCTCTACACCCTCGCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174070.8 |
||
| CDS CAA 90 bp | TTTCCAGAAATCCTGCAGCTGGCGGGCCAGGAGTTGACTGCTCCGTaGTCCATCAGGTGGGGGACTTCGTTCTGCGTCTTCTCCCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: FPEILQLAGQELTAP*SIRWGTSFCVFSRC Trigger: GCATCGGGAGAAGACGCAGAACGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGATTTCTGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS CAA 90 bp | GTTCCGAGACTTTTTCCAGAAATCCTGCAGCTGGCGGGCCAGGAGTaGACTGCTCCGTTGTCCATCAGGTGGGGGACTTCGTTCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPRLFPEILQLAGQE*TAPLSIRWGTSFCV Trigger: GACGCAGAACGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGATTTCTGGAAAAAGTCTCGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS CAA 72 bp | CTTTTTCCAGAAATCCTGCAGCTGGCGGGCCAGGAGTaGACTGCTCCGTTGTCCATCAGGTGGGGGACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LFPEILQLAGQE*TAPLSIRWGTS Trigger: CGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGATTTCTGGAAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS CAA 90 bp | GAGCTGAGGCTCCTCACGTACTTGGAGGGAGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGAACTAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ELRLLTYLEGGSLTT*ALVTSKSSLCGTRV Trigger: CACCCTAGTTCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGAGGAGCCTCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174070.8 |
||
| CDS CAA 90 bp | GAGGGTGTAGAGCTGAGGCTCCTCACGTACTTGGAGGGAGGGTCTTaGACAACATTGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EGVELRLLTYLEGGS*TTLALVTSKSSLCG Trigger: TCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGAGGAGCCTCAGCTCTACACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174070.8 |
||
| CDS TCA 72 bp | TTTTTCCAGAAATCCTGCAGCTGGCGGGCCAGGAGTTaGCTGCTCCGTTGTCCATCAGGTGGGGGACTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: FFQKSCSWRARS*LLRCPSGGGLR Trigger: ACGAAGTCCCCCACCTGATGGACAACGGAGCAGTCAACTCCTGGCCCGCCAGCTGCAGGATTTCTGGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056181.7 ENSMUST00000152471.2 ENSMUST00000172577.8 ENSMUST00000174070.8 |
||
| CDS TCA 72 bp | CGAGGGTGTAGAGCACGTACTTGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCACCTCAAAGAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGCRARTWREGL*QHWRWSPQRAA Trigger: GGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGCTCTACACCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056181.7 |
||
| CDS TCA 72 bp | GTAGTGCCTGGAGCACGTACTTGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCACCTCAAAGAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VVPGARTWREGL*QHWRWSPQRAA Trigger: GGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGCTCCAGGCACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140519.2 |
||
| CDS CAA 72 bp | GTAAGGCCTGCTTCCTGTAGTGCCTGGAGCACGTACTaGGAGGGAGGGTCTTTGACAACATTGGCGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VRPASCSAWSTY*EGGSLTTLALV Trigger: GACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGCTCCAGGCACTACAGGAAGCAGGCCTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140519.2 |
||
| CDS CAA 72 bp | GAGCTGAGGCTCCTCACGTACTTGGAGGGAGGGTCTTaGACAACATTGGCGCTGGTCACCTCAAAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ELRLLTYLEGGS*TTLALVTSKSS Trigger: GCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGAGGAGCCTCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174070.8 |
||
| CDS CAA 90 bp | GGAACCTCACTCACCACGTACTTGGAGGGAGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGAACTAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTSLTTYLEGGSLTT*ALVTSKSSLCGTRV Trigger: CACCCTAGTTCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGGTGAGTGAGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS CAA 90 bp | AGGGTTCCTGGAACCTCACTCACCACGTACTTGGAGGGAGGGTCTTaGACAACATTGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVPGTSLTTYLEGGS*TTLALVTSKSSLCG Trigger: TCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGGTGAGTGAGGTTCCAGGAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS TCA 72 bp | GAACCTCACTCACCACGTACTTGGAGGGAGGGTCTTTaGCAACATTGGCGCTGGTCACCTCAAAGAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPHSPRTWREGL*QHWRWSPQRAA Trigger: GGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGGTGAGTGAGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS CAA 72 bp | TGTAGTGCCTGGAGCACGTACTTGGAGGGAGGGTCTTaGACAACATTGGCGCTGGTCACCTCAAAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSAWSTYLEGGS*TTLALVTSKSS Trigger: GCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGCTCCAGGCACTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140519.2 |
||
| CDS CAA 72 bp | CTCACCACGTACTTGGAGGGAGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTTYLEGGSLTT*ALVTSKSSLCG Trigger: TCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS CAA 72 bp | GGAACCTCACTCACCACGTACTTGGAGGGAGGGTCTTaGACAACATTGGCGCTGGTCACCTCAAAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTSLTTYLEGGS*TTLALVTSKSS Trigger: GCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGGTGAGTGAGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152471.2 |
||
| CDS CAA 72 bp | GAGGGTGTAGAGTTGGAGGGAGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EGVELEGGSLTT*ALVTSKSSLCG Trigger: TCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAACTCTACACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172577.8 |
||
| CDS CAA 72 bp | CTCCTCACGTACTTGGAGGGAGGGTCTTTGACAACATaGGCGCTGGTCACCTCAAAGAGCAGCCTCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLTYLEGGSLTT*ALVTSKSSLCG Trigger: TCCACAGAGGCTGCTCTTTGAGGTGACCAGCGCCAATGTTGTCAAAGACCCTCCCTCCAAGTACGTGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174070.8 |
||