Pregenerated sensors for SNX19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031993Ensembl transcript IDs: ENSMUST00000164099.3, ENSMUST00000216545.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCTCCGTTCCCACTCCCAGCCTGGAGCATCACCCCAACACCCGTaGCTCTCCCACATGCTCATGATCTTGAGGTTGGAGCCTGCTACT | + |
|
Preference number: 1 (lower is better) Translates to: SLRSHSQPGASPQHP*LSHMLMILRLEPAT Trigger: AGTAGCAGGCTCCAACCTCAAGATCATGAGCATGTGGGAGAGCCACGGGTGTTGGGGTGATGCTCCAGGCTGGGAGTGGGAACGGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR GCA 90 bp | CCTGAGCTGAGGGTTGGCTATGGTCTCTCATGGGTACCCTGGGGATaGCAGCTACTCATGTGCACTCACTGGGCAGCAGCACTCACCTTG | + |
|
Preference number: 1 (lower is better) Translates to: PELRVGYGLSWVPWG*QLLMCTHWAAALTL Trigger: CAAGGTGAGTGCTGCTGCCCAGTGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCAACCCTCAGCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 90 bp | AGACCTCCTGAGCTGAGGGTTGGCTATGGTCTCTCATGGGTACCCTaGGGATGCCAGCTACTCATGTGCACTCACTGGGCAGCAGCACTC | + |
|
Preference number: 1 (lower is better) Translates to: RPPELRVGYGLSWVP*GCQLLMCTHWAAAL Trigger: GAGTGCTGCTGCCCAGTGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCAACCCTCAGCTCAGGAGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 90 bp | TGCACATGTGTACCAGGACTGGTAGCAGATTCAAGTGGACACAGGTaGCTGTGGTCATGCGAAGGGGGTGGGTGTTGGGAGAGAAGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: CTCVPGLVADSSGHR*LWSCEGGGCWERSL Trigger: CAGGCTTCTCTCCCAACACCCACCCCCTTCGCATGACCACAGCCACCTGTGTCCACTTGAATCTGCTACCAGTCCTGGTACACATGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 90 bp | TGTGTACCAGGACTGGTAGCAGATTCAAGTGGACACAGGTGGCTGTaGTCATGCGAAGGGGGTGGGTGTTGGGAGAGAAGCCTGTTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: CVPGLVADSSGHRWL*SCEGGGCWERSLFR Trigger: TCTGAACAGGCTTCTCTCCCAACACCCACCCCCTTCGCATGACCACAGCCACCTGTGTCCACTTGAATCTGCTACCAGTCCTGGTACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 90 bp | ACAGTGCTTGTGCACATGTGTACCAGGACTGGTAGCAGATTCAAGTaGACACAGGTGGCTGTGGTCATGCGAAGGGGGTGGGTGTTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: TVLVHMCTRTGSRFK*TQVAVVMRRGWVLG Trigger: TCCCAACACCCACCCCCTTCGCATGACCACAGCCACCTGTGTCCACTTGAATCTGCTACCAGTCCTGGTACACATGTGCACAAGCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 90 bp | AGCAGATTCAAGTGGACACAGGTGGCTGTGGTCATGCGAAGGGGGTaGGTGTTGGGAGAGAAGCCTGTTCAGAAATCAGGGTTGCTCATT | + |
|
Preference number: 1 (lower is better) Translates to: SRFKWTQVAVVMRRG*VLGEKPVQKSGLLI Trigger: AATGAGCAACCCTGATTTCTGAACAGGCTTCTCTCCCAACACCCACCCCCTTCGCATGACCACAGCCACCTGTGTCCACTTGAATCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR TCA 90 bp | TTCATCACACACTTCAGAGTCTGTGACAACTTTGATGCTGGCTCTTaGTGCCTTCCCAGTTCTTACCAGGCTTTCCCCATGACCTCCATC | + |
|
Preference number: 1 (lower is better) Translates to: FITHFRVCDNFDAGS*CLPSSYQAFPMTSI Trigger: GATGGAGGTCATGGGGAAAGCCTGGTAAGAACTGGGAAGGCATCAAGAGCCAGCATCAAAGTTGTCACAGACTCTGAAGTGTGTGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR GCA 90 bp | ACTCACCTTGTGACTTTCCCTCCAACTCCCTTTTCTTCTAACAGCTaGTCTCAGTTGCTCCATCTTTCCAGTGGACACAGACTGTTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: THLVTFPPTPFSSNS*SQLLHLSSGHRLFC Trigger: GCAGAACAGTCTGTGTCCACTGGAAAGATGGAGCAACTGAGAGCAGCTGTTAGAAGAAAAGGGAGTTGGAGGGAAAGTCACAAGGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCGCTTCCTGGGGAATCTaGGGCAGAGGTAGCTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PPLRSNPHAKDYGNRYTCASWGI*GRGSWG Trigger: GCCCCAGCTACCTCTGCCTCAGATTCCCCAGGAAGC...GCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216545.2 |
||
| 3UTR CAA 90 bp | CGAAGGGGGTGGGTGTTGGGAGAGAAGCCTGTTCAGAAATCAGGGTaGCTCATTCCGCCAATACAGAATAAAGTGGCCTTTACCCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RRGWVLGEKPVQKSG*LIPPIQNKVAFTLG Trigger: TCCTAGGGTAAAGGCCACTTTATTCTGTATTGGCGGAATGAGCAACCCTGATTTCTGAACAGGCTTCTCTCCCAACACCCACCCCCTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTATGGTCTCTCATGGGTACCCTGGGGATGCCAGCTACTCATGTGCACTCAGCTTTACCAGAAGTTTaGCAGTGTGCTTTGAAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: WLWSLMGTLGMPATHVHSALPEV*QCALKP Trigger: AGGCTTCAAAGCACACTGTCAAACTTCTGGTAAAGC...TGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCTCTCATGGGTACCCTGGGGATGCCAGCTACTCATGTGCACTCACTGGGCACATGCCAAAGACTATaGAAACAGGTACACATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: WSLMGTLGMPATHVHSLGTCQRL*KQVHMQ Trigger: TTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGT...GCCCAGTGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAACTTTGATGCTGGCTCTTGATGCCTTCCCAGTTCTTACCAGGCTTTCCCCACCACTTGCACATTTGTaGATTAGGTTCACGCATGCG | + |
|
Preference number: 2 (lower is better) Translates to: TTLMLALDAFPVLTRLSPPLAHL*IRFTHA Trigger: CGCATGCGTGAACCTAATCCACAAATGTGCAAGTGG...TGGGGAAAGCCTGGTAAGAACTGGGAAGGCATCAAGAGCCAGCATCAAAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR TCA 90 bp | GACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCTGTTTCTGGAAGCTaGACAGCTCTCTTTTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: DLLSAAIHMPKTMETGTHAVSGS*TALFFK Trigger: CTTGAAAAAGAGAGCTGTTCAGCTTCCAGAAACAGC...ATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTATGGTCTCTCATGGGTACCCTGGGGATGCCAGCTACTCATGTGCACTCATCTCTTTGGAAATACTaGGACCAAATACGTAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: WLWSLMGTLGMPATHVHSSLWKY*DQIRNL Trigger: CAAGTTACGTATTTGGTCTCAGTATTTCCAAAGAGA...TGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAACTTTGATGCTGGCTCTTGATGCCTTCCCAGTTCTTACCAGGCTTTCCCCAGTACACCCTCAGCCATaGAACAAGTACTTTCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TTLMLALDAFPVLTRLSPVHPQP*NKYFPF Trigger: GAAAGGAAAGTACTTGTTCCATGGCTGAGGGTGTAC...TGGGGAAAGCCTGGTAAGAACTGGGAAGGCATCAAGAGCCAGCATCAAAGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 90 bp | AGAATCTTGTGGAGGGATCCCCACTCATCCCCTGACTTCTATTCTTaGTACACCCTCAGCCATGGAACAAGTACTTTCCTTTCTCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RILWRDPHSSPDFYS*YTLSHGTSTFLSLW Trigger: CCAAAGAGAAAGGAAAGTACTTGTTCCATGGCTGAGGGTGTACAAAGAATAGAAGTCAGGGGATGAGTGGGGATCCCTCCACAAGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAGGCTATAGACAGCCATCTTCTTaGGGCTTCCTGGGGAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: QQSTCQRLWKQVHMQIGYRQPSS*GFLGNL Trigger: CAGATTCCCCAGGAAGCCTCAAGAAGATGGCTGTCT...ATAGCCTATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216545.2 |
||
| 3UTR-3UTR GCA 90 bp | TATAGCAAGGCTAGAGCTACACAACACAGACCTCCTGAGCTGAGGGTTGGCTATGGGATAAATAGCCTTTaGTTCACAGCTTCTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YSKARATQHRPPELRVGYGINSL*FTASVL Trigger: GAGAACAGAAGCTGTGAAGCAAAGGCTATTTATCCC...ATAGCCAACCCTCAGCTCAGGAGGTCTGTGTTGTGTAGCTCTAGCCTTGCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTTACAAATGTGCAATCAAGACAGAATGGGTGTTGGTCTTACTTCAGGTACTGCCAGCTACTCATGTaGACTCACTGGGCAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLTNVQSRQNGCWSYFRYCQLLM*THWAAA Trigger: TGCTGCTGCCCAGTGAGTGCACATGAGTAGCTGGCA...GTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAGCTGTTTCTGGAAGCTaGACAGCTCTCTTTTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SPQQSTCQRLWKQVHMQIAVSGS*TALFFK Trigger: CTTGAAAAAGAGAGCTGTTCAGCTTCCAGAAACAGC...TATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTACACCCTCAGCCATGGAACAAGTACTTTCCTTTCTCTTTGGAAATACTGAGTTCTCCTGTGTCACCTaGCACTTGCACATTTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: CTPSAMEQVLSFLFGNTEFSCVT*HLHICG Trigger: TCCACAAATGTGCAAGTGGCAGGTGACACAGGAGAA...CTCAGTATTTCCAAAGAGAAAGGAAAGTACTTGTTCCATGGCTGAGGGTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR GCA 90 bp | TTAGAAATTGCCAGAAAGAGCTCAGTATCCACCCATCTCTCCTCTTCTTACAAAGGACACAGACTGTTCTaGCTTTATTCCTGGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LEIARKSSVSTHLSSSYKGHRLF*LYSWPP Trigger: AGGAGGCCAGGAATAAAGGCAGAACAGTCTGTGTCC...TTTGTAAGAAGAGGAGAGATGGGTGGATACTGAGCTCTTTCTGGCAATTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACATATCTTAGCTGTTTCTaGAAGCTGAACAGCTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RKQDLLSAAIHMPKTMETYLSCF*KLNSSL Trigger: AAGAGAGCTGTTCAGCTTCCAGAAACAGCTAAGATA...TGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTTTTAAGCCAGAACCCTCCCAGTCACATCAGAGTGTAATGTACAGTTACCAAAGAGCAAGTCCCTaGAGACACACTTTCCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: FLFKPEPSQSHQSVMYSYQRASP*RHTFLP Trigger: GGGAAGGAAAGTGTGTCTCCAGGGACTTGCTCTTTG...GTAACTGTACATTACACTCTGATGTGACTGGGAGGGTTCTGGCTTAAAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAGAAATTGCCAGAAAGAGCTCAGTATCCACCCATCTCTCCTCTTCTTACAAATTCTTCTGGAATTGTTaGGAACTGGGCAGGGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LEIARKSSVSTHLSSSYKFFWNC*ELGRVR Trigger: CCTTACCCTGCCCAGTTCCCAACAATTCCAGAAGAA...TTTGTAAGAAGAGGAGAGATGGGTGGATACTGAGCTCTTTCTGGCAATTTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR GCA 90 bp | TATAAAATGAAGCATAGGGAAGTTCTCTGGGCTGCAGGCATGAAAAGATCCCTTTTCAGAAATCAGGGTTaGTCATTCCGCCAATACAGA | + |
|
Preference number: 2 (lower is better) Translates to: YKMKHREVLWAAGMKRSLFRNQG*SFRQYR Trigger: TCTGTATTGGCGGAATGAGCAACCCTGATTTCTGAA...AAGGGATCTTTTCATGCCTGCAGCCCAGAGAACTTCCCTATGCTTCATTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR GCA 90 bp | TTAGAAATTGCCAGAAAGAGCTCAGTATCCACCCATCTCTCCTCTTCTTACAAATTGCTATATTATTCTTaGCAGAATCTTGTGGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LEIARKSSVSTHLSSSYKLLYYS*QNLVEG Trigger: TCCCTCCACAAGATTCTGGCAAGAATAATATAGCAA...TTTGTAAGAAGAGGAGAGATGGGTGGATACTGAGCTCTTTCTGGCAATTTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 90 bp | TTTGGAAATACTGAGACCAAATACGTAACTTGCCATGCAATTCTGTaGATAGAAGGAAAGTTACAAATCCAAAACGCATTTGCTTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FGNTETKYVTCHAIL*IEGKLQIQNAFAFG Trigger: CCCAAAAGCAAATGCGTTTTGGATTTGTAACTTTCCTTCTATCAACAGAATTGCATGGCAAGTTACGTATTTGGTCTCAGTATTTCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | TGTGGCTCAGTTCTCCCTCCGTTCCCACTCCCAGCCTaGAGCATCACCCCAACACCCGTGGCTCTCCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: CGSVLPPFPLPA*SITPTPVALPH Trigger: ATGTGGGAGAGCCACGGGTGTTGGGGTGATGCTCCAGGCTGGGAGTGGGAACGGAGGGAGAACTGAGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR GCA 72 bp | AGGGTTGGCTATGGTCTCTCATGGGTACCCTGGGGATaGCAGCTACTCATGTGCACTCACTGGGCAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RVGYGLSWVPWG*QLLMCTHWAAA Trigger: TGCTGCTGCCCAGTGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | GAGCTGAGGGTTGGCTATGGTCTCTCATGGGTACCCTaGGGATGCCAGCTACTCATGTGCACTCACTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ELRVGYGLSWVP*GCQLLMCTHWA Trigger: TGCCCAGTGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCAACCCTCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | AGACCTCCTGAGCTGAGGGTTGGCTATGGTCTCTCATaGGTACCCTGGGGATGCCAGCTACTCATGTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RPPELRVGYGLS*VPWGCQLLMCT Trigger: AGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCAACCCTCAGCTCAGGAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | CACAGGTGGCTGTGGTCATGCGAAGGGGGTGGGTGTTaGGAGAGAAGCCTGTTCAGAAATCAGGGTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HRWLWSCEGGGC*ERSLFRNQGCS Trigger: TGAGCAACCCTGATTTCTGAACAGGCTTCTCTCCCAACACCCACCCCCTTCGCATGACCACAGCCACCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | AAGTGGACACAGGTGGCTGTGGTCATGCGAAGGGGGTaGGTGTTGGGAGAGAAGCCTGTTCAGAAATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KWTQVAVVMRRG*VLGEKPVQKSG Trigger: CCCTGATTTCTGAACAGGCTTCTCTCCCAACACCCACCCCCTTCGCATGACCACAGCCACCTGTGTCCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | GTGCACATGTGTACCAGGACTGGTAGCAGATTCAAGTaGACACAGGTGGCTGTGGTCATGCGAAGGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VHMCTRTGSRFK*TQVAVVMRRGW Trigger: CCACCCCCTTCGCATGACCACAGCCACCTGTGTCCACTTGAATCTGCTACCAGTCCTGGTACACATGTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | GCCAAACAAACAGGGAAGAAATCAAGTGGACTAGTGTaGCTCAGTTCTCCCTCCGTTCCCACTCCCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AKQTGKKSSGLV*LSSPSVPTPSL Trigger: CAGGCTGGGAGTGGGAACGGAGGGAGAACTGAGCCACACTAGTCCACTTGATTTCTTCCCTGTTTGTTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR TCA 72 bp | CCTAGGAGCCACAGGATCAGTTCTAAGGCATCCCCTTaGAACCATATCCCTAGCAGGCACTCAGAGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: PRSHRISSKASP*NHIPSRHSEDM Trigger: CATGTCCTCTGAGTGCCTGCTAGGGATATGGTTTCAAGGGGATGCCTTAGAACTGATCCTGTGGCTCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCTTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCGAGACAGCCATCTTCTaGAGGCTTCCTGGGGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: HSFCSQGNKTSSPQQSTCETAIF*RLPGES Trigger: AGATTCCCCAGGAAGCCTCAAGAAGATGGCTGTCTC...GCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAAGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216545.2 |
||
| 3UTR CCA 72 bp | TTGTTTCTCCTGTGTCACCTGCCACTTGCACATTTGTaGATTAGGTTCACGCATGCGCAGGGCCATGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LFLLCHLPLAHL*IRFTHAQGHAV Trigger: AACAGCATGGCCCTGCGCATGCGTGAACCTAATCCACAAATGTGCAAGTGGCAGGTGACACAGGAGAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR TCA 72 bp | CACTTCAGAGTCTGTGACAACTTTGATGCTGGCTCTTaGTGCCTTCCCAGTTCTTACCAGGCTTTCCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: HFRVCDNFDAGS*CLPSSYQAFPM Trigger: CATGGGGAAAGCCTGGTAAGAACTGGGAAGGCATCAAGAGCCAGCATCAAAGTTGTCACAGACTCTGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR GCA 72 bp | TGGGCTGCAGGCATGAAAAGATCCCTTAGACTTCATTaGCACAGGAACTCGTGGTGTGTTGGGTTAACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WAAGMKRSLRLH*HRNSWCVGLTV Trigger: CACTGTTAACCCAACACACCACGAGTTCCTGTGGCAATGAAGTCTAAGGGATCTTTTCATGCCTGCAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGACCTCCATCCCTGTGGGTTCTGTAGTTGAGTATAGCAAGGCTAGAGCTACAAACAGCTGCTCTCAGTaGCTCCATCTTTCCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: MTSIPVGSVVEYSKARATNSCSQ*LHLSSG Trigger: TCCACTGGAAAGATGGAGCAACTGAGAGCAGCTGTT...TGTAGCTCTAGCCTTGCTATACTCAACTACAGAACCCACAGGGATGGAGGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR TCA 72 bp | CCAGAGGGCACAGGTATCTTAGCTGTTTCTGGAAGCTaGACAGCTCTCTTTTTCAAGCCTTTGGAGATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PEGTGILAVSGS*TALFFKPLEMV Trigger: CACCATCTCCAAAGGCTTGAAAAAGAGAGCTGTTCAGCTTCCAGAAACAGCTAAGATACCTGTGCCCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| 3UTR CCA 72 bp | TCTGAGGGTCTAGGGAAGGGGATACTTCAAAAACTATaGAGCCATCAAGTCAAGCTTCAAGGCCAGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SEGLGKGILQKL*SHQVKLQGQKR Trigger: CCTCTTCTGGCCTTGAAGCTTGACTTGATGGCTCCATAGTTTTTGAAGTATCCCCTTCCCTAGACCCTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAATGTGCAATCAAGACAGAATGGGTGTTGGTCTTACTTCAGGTACTAATCGCAGGGCCATGCTGTaGGCAAACCGTGATGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LQMCNQDRMGVGLTSGTNRRAML*ANRDGE Trigger: CTCACCATCACGGTTTGCCAACAGCATGGCCCTGCG...ATTAGTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | CTTAGCTCCAGAGGGCACAGGTATCTTAGCTGTTTCTaGAAGCTGAACAGCTCTCTTTTTCAAGCCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSSRGHRYLSCF*KLNSSLFQAFG Trigger: TCCAAAGGCTTGAAAAAGAGAGCTGTTCAGCTTCCAGAAACAGCTAAGATACCTGTGCCCTCTGGAGCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTACAAATGTGCAATCAAGACAGAATGGGTGTTGGTCTTACTTCAGGTACAAAACGCATTTGCTTTaGGGTAGGGGCTGGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTNVQSRQNGCWSYFRYKTHLL*GRGWEE Trigger: TTCCTCCCAGCCCCTACCCAAAAGCAAATGCGTTTT...GTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTTCCAGTGGACACAGACTGTTCTGCCTTTATTCCTGGCCTCCTAAGGACTTTTGCTATATTATTCTaGCCAGAATCTTGTGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IFPVDTDCSAFIPGLLRTFAILF*PESCGG Trigger: CCCTCCACAAGATTCTGGCAAGAATAATATAGCAAA...AGTCCTTAGGAGGCCAGGAATAAAGGCAGAACAGTCTGTGTCCACTGGAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR GCA 72 bp | CTCAGTATCCACCCATCTCTCCTCTTCTTACAAATGTaGAATCAAGACAGAATGGGTGTTGGTCTTACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSIHPSLLFLQM*NQDRMGVGLTS Trigger: TGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAAGAAGAGGAGAGATGGGTGGATACTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | GTCCTCTTATATAAAATGAAGCATAGGGAAGTTCTCTaGGCTGCAGGCATGAAAAGATCCCTTAGACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLYKMKHREVL*AAGMKRSLRLH Trigger: ATGAAGTCTAAGGGATCTTTTCATGCCTGCAGCCCAGAGAACTTCCCTATGCTTCATTTTATATAAGAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCATCCCCTGACTTCTATTCTTTGTACACCCTCAGCCATGGAACAAGTACTTTGCCATGCAATTCTGTaGATAGAAGGAAAGTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: THPLTSILCTPSAMEQVLCHAIL*IEGKLQ Trigger: TTGTAACTTTCCTTCTATCAACAGAATTGCATGGCA...AAGTACTTGTTCCATGGCTGAGGGTGTACAAAGAATAGAAGTCAGGGGATGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTACAAATGTGCAATCAAGACAGAATGGGTGTTGGTCTTACTTCAGGTACAGGATGGCTTATCTTTaGAAGGCAGGTGGAGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTNVQSRQNGCWSYFRYRMAYL*KAGGVK Trigger: TTTTACTCCACCTGCCTTCAAAAGATAAGCCATCCT...GTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CCA 72 bp | CTCTCCTCTTCTTACAAATGTGCAATCAAGACAGAATaGGTGTTGGTCTTACTTCAGGTACTAATATTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSSYKCAIKTE*VLVLLQVLIFS Trigger: TGAGAATATTAGTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAAGAAGAGGAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR TCA 72 bp | CATGGAACAAGTACTTTCCTTTCTCTTTGGAAATACTaGGACCAAATACGTAACTTGCCATGCAATTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HGTSTFLSLWKY*DQIRNLPCNSV Trigger: AACAGAATTGCATGGCAAGTTACGTATTTGGTCTCAGTATTTCCAAAGAGAAAGGAAAGTACTTGTTCCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | GACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGGCTGCCTCCATCTCTaGCTCGAAGGCCGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DLLSAAIHMPKTMETGTHGCLHL*LEGRLM Trigger: CATGAGCCGGCCTTCGAGGCAGAGATGGAGGCAGCC...ATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTATGGTCTCTCATGGGTACCCTGGGGATGCCAGCTACTCATGTGCACTCACAACCCTTTCATGGCTaGCTCCATCTCTGCCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLWSLMGTLGMPATHVHSQPFHG*LHLCLE Trigger: TTCGAGGCAGAGATGGAGGCAGCCATGAAAGGGTTG...TGAGTGCACATGAGTAGCTGGCATCCCCAGGGTACCCATGAGAGACCATAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | GGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGCGTAGCTGCTTTCTGTaGCTGCGTCCTTCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GNKTSSPQQSTCQRLWKQRSCFL*LRPSRP Trigger: CGGCCTGGAAGGACGCAGGCACAGAAAGCAGCTACG...CTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTTCCAGTGGACACAGACTGTTCTGCCTTTATTCCTGGCCTCCTAAGGACTCCCCTAGGATGGCAGTaGAGCCCAGCCATCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFPVDTDCSAFIPGLLRTPLGWQ*SPAILP Trigger: TGGGAGGATGGCTGGGCTCCACTGCCATCCTAGGGG...AGTCCTTAGGAGGCCAGGAATAAAGGCAGAACAGTCTGTGTCCACTGGAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCGGCCTCCTCGGCCTCTaGTCCTTCCATACATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPLRSNPHAKDYGNRYTCGLLGL*SFHTFR Trigger: TCTGAATGTATGGAAGGAGCAGAGGCCGAGGAGGCC...GCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGTCCTCCAGGCGGGTCTaGAGATTCAAGAACTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQGNKTSSPQQSTCQRLWSSRRV*RFKNSR Trigger: CCGGGAGTTCTTGAATCTGCAGACCCGCCTGGAGGA...CCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTCCTCGTCTCCAGGTaGGGCTTGGGCACTAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNKTSSPQQSTCQRLWKQVLVSR*GLGTNS Trigger: AGAGTTAGTGCCCAAGCCCCACCTGGAGACGAGGAC...CTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTTCCAGTGGACACAGACTGTTCTGCCTTTATTCCTGGCCTCCTAAGGACTCTCTGGGGAAGGGGCTaGCTCACTGGAGGTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFPVDTDCSAFIPGLLRTLWGRG*LTGGQV Trigger: CACTTGACCTCCAGTGAGCCAGCCCCTTCCCCAGAG...AGTCCTTAGGAGGCCAGGAATAAAGGCAGAACAGTCTGTGTCCACTGGAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 72 bp | CCATTGTTTCTCCTGTGTCACCTGCCACTTGCACATTaGTGGATTAGGTTCACGCATGCGCAGGGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFLLCHLPLAH*WIRFTHAQGHA Trigger: AGCATGGCCCTGCGCATGCGTGAACCTAATCCACAAATGTGCAAGTGGCAGGTGACACAGGAGAAACAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGTTCCAGCTGCCTTTCTaGCTCGGGACATGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SQGNKTSSPQQSTCQRLWFQLPF*LGTWRT Trigger: TGTCCTCCATGTCCCGAGGCAGAAAGGCAGCTGGAA...CCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTTCCAGTGGACACAGACTGTTCTGCCTTTATTCCTGGCCTCCTAAGGACTCAGCTCATGGCAGGATaGGGAGCTGTAACCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IFPVDTDCSAFIPGLLRTQLMAG*GAVTWQ Trigger: CTGCCAGGTTACAGCTCCCCATCCTGCCATGAGCTG...AGTCCTTAGGAGGCCAGGAATAAAGGCAGAACAGTCTGTGTCCACTGGAAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR TCA 90 bp | TTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGAGAGGGGCTGCTGGAATaGCTCCAAGACAAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCSQGNKTSSPQQSTCQREGLLE*LQDKTP Trigger: TGGAGTCTTGTCTTGGAGTCATTCCAGCAGCCCCTC...TCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR GCA 90 bp | TATAGCAAGGCTAGAGCTACACAACACAGACCTCCTGAGCTGAGGGTTGGCTATCACAGCCACTTCCATTaGTCCATCAACAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSKARATQHRPPELRVGYHSHFH*SINSRR Trigger: CCTCCTGCTGTTGATGGAGCAATGGAAGTGGCTGTG...ATAGCCAACCCTCAGCTCAGGAGGTCTGTGTTGTGTAGCTCTAGCCTTGCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATCGAAGGCCGGCTCATaGCTCACAGAACGATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSQGNKTSSPQQSTCQRLSKAGS*LTERYQ Trigger: CTGGTATCGTTCTGTGAGCCATGAGCCGGCCTTCGA...TAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCTTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCGGGAGCACACACCACTaGCGAGATCTTTGTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSFCSQGNKTSSPQQSTCGSTHH*RDLCLN Trigger: GTTTAGACAAAGATCTCGCCAGTGGTGTGTGCTCCC...GCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAAGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCCACTGTGTCAGAAAATAGCCAAAGAGCAAGTCCCTGGAGACACACTTGAGGGGCTGCTGGAATaGCTCCAAGACAAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLCQKIAKEQVPGDTLEGLLE*LQDKTP Trigger: TGGAGTCTTGTCTTGGAGTCATTCCAGCAGCCCCTC...AAGTGTGTCTCCAGGGACTTGCTCTTTGGCTATTTTCTGACACAGTGGACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR TCA 90 bp | TTAGAAATTGCCAGAAAGAGCTCAGTATCCACCCATCTCTCCTCTTCTTACAAAGCTTCCTGGGGAATCTaGGGCAGAGGTAGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEIARKSSVSTHLSSSYKASWGI*GRGSWG Trigger: GCCCCAGCTACCTCTGCCTCAGATTCCCCAGGAAGC...TTTGTAAGAAGAGGAGAGATGGGTGGATACTGAGCTCTTTCTGGCAATTTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | ATCTTTCCAGTGGACACAGACTGTTCTGCCTTTATTCCTGGCCTCCTAAGGACTCATGGCTGTCCACTATaGTCATCCGCCTTCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFPVDTDCSAFIPGLLRTHGCPL*SSAFEA Trigger: AGCTTCGAAGGCGGATGAGCATAGTGGACAGCCATG...AGTCCTTAGGAGGCCAGGAATAAAGGCAGAACAGTCTGTGTCCACTGGAAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | AGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACACACAGCCACTTCCATTaGTCCATCAACAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQDLLSAAIHMPKTMETHSHFH*SINSRR Trigger: CCTCCTGCTGTTGATGGAGCAATGGAAGTGGCTGTG...TGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCTACTGGGGCTGTTGCTaGAGAAGATGCTTTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PPLRSNPHAKDYGNRYTCYWGCC*RRCFSY Trigger: GTAGGAAAAGCATCTTCTCCAGCAACAGCCCCAGTA...GCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGAGGAGGTCAAGTGTACTaGGGCTGTTGCTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCSQGNKTSSPQQSTCQRGGQVY*GCCWRR Trigger: TCTTCTCCAGCAACAGCCCCAGTACACTTGACCTCC...TCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGTACAGTGTGTATGGGTaGAATCCAGTCCCACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNKTSSPQQSTCQRLWKQYSVYG*NPVPLC Trigger: GCACAGTGGGACTGGATTCCACCCATACACACTGTA...CTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCTTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCAGTGTACAGTGTGTATaGGTGGAATCCAGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HSFCSQGNKTSSPQQSTCSVQCV*VESSPT Trigger: AGTGGGACTGGATTCCACCCATACACACTGTACACT...GCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAAGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | GACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATCTCTTGTTGAGCTCTTaGGCTACCACAGCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLLSAAIHMPKTMETGTHLLLSS*ATTALS Trigger: GGACAAAGCTGTGGTAGCCCAAGAGCTCAACAAGAG...ATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR GCA 90 bp | ATGACCTCCATCCCTGTGGGTTCTGTAGTTGAGTATAGCAAGGCTAGAGCTACAGTGTACTGGGGCTGTTaGTGGAGAAGATGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTSIPVGSVVEYSKARATVYWGC*WRRCFS Trigger: GGAAAAGCATCTTCTCCAGCAACAGCCCCAGTACAC...TGTAGCTCTAGCCTTGCTATACTCAACTACAGAACCCACAGGGATGGAGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTACTCCACCTCCTTGTCTaGTGTGTCAATCTGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSQGNKTSSPQQSTCQRLLHLLV*CVNLDL Trigger: GAGATCCAGATTGACACAGCAGACAAGGAGGTGGAG...TAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATACTGCTTCTCCGTAGCTaGTTTCTGTGCCTGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQQSTCQRLWKQVHMQILLLRS*FLCLRP Trigger: AGGACGCAGGCACAGAAAGCAGCTACGGAGAAGCAG...TATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTGATGCTGGCTCTTGATGCCTTCCCAGTTCTTACCAGGCTTTCCCCAGGGACTTCTGCTGGCTaGATTCTCAGTAACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTLMLALDAFPVLTRLSPGTSAG*ILSNFV Trigger: GACAAAGTTACTGAGAATCCAGCCAGCAGAAGTCCC...TGGGGAAAGCCTGGTAAGAACTGGGAAGGCATCAAGAGCCAGCATCAAAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 72 bp | TGGAGGGATCCCCACTCATCCCCTGACTTCTATTCTTaGTACACCCTCAGCCATGGAACAAGTACTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRDPHSSPDFYS*YTLSHGTSTFL Trigger: AAGGAAAGTACTTGTTCCATGGCTGAGGGTGTACAAAGAATAGAAGTCAGGGGATGAGTGGGGATCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TATAGCAAGGCTAGAGCTACACAACACAGACCTCCTGAGCTGAGGGTTGGCTATGGGTTTAGTTCCCTGTaGTGCATCATGTCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKARATQHRPPELRVGYGFSSL*CIMSVL Trigger: AAGTACAGACATGATGCAGCACAGGGAACTAAACCC...ATAGCCAACCCTCAGCTCAGGAGGTCTGTGTTGTGTAGCTCTAGCCTTGCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGATGTCAGAAAGGAAGTTaGCTGGGGTCATTAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCSQGNKTSSPQQSTCQRCQKGS*LGSLAG Trigger: TCCTGCTAATGACCCCAGGCAACTTCCTTTCTGACA...TCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAGAGGTGTCATCTCCTTaGTCCACCTCCTTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQQSTCQRLWKQVHMQIEVSSP*STSLSA Trigger: AGCAGACAAGGAGGTGGAGCAAGGAGATGACACCTC...TATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTACTCGGCTATACTCAGTaGAGGGGCAATTTTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSQGNKTSSPQQSTCQRLLGYTQ*RGNFTG Trigger: TCCAGTAAAATTGCCCCTGCACTGAGTATAGCCGAG...TAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR TCA 90 bp | TGTACACCCTCAGCCATGGAACAAGTACTTTCCTTTCTCTTTGGAAATACTGAGAGACAGCCATCTTCTTaGGGCTTCCTGGGGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTPSAMEQVLSFLFGNTERQPSS*GFLGNL Trigger: CAGATTCCCCAGGAAGCCTCAAGAAGATGGCTGTCT...CTCAGTATTTCCAAAGAGAAAGGAAAGTACTTGTTCCATGGCTGAGGGTGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACTATGGAAACAGGTACACATGCAAATAGGCTATGTAGCTCCGTCATGCTCTTGTTGAGCTCTTaGGCTACCACAGCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKTMETGTHANRLCSSVMLLLSS*ATTALS Trigger: GGACAAAGCTGTGGTAGCCCAAGAGCTCAACAAGAG...CATGACGGAGCTACATAGCCTATTTGCATGTGTACCTGTTTCCATAGTCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| 3UTR CAA 72 bp | GTGTGTTCATCACACACTTCAGAGTCTGTGACAACTTaGATGCTGGCTCTTGATGCCTTCCCAGTTCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: VCSSHTSESVTT*MLALDAFPVLT Trigger: GGTAAGAACTGGGAAGGCATCAAGAGCCAGCATCAAAGTTGTCACAGACTCTGAAGTGTGTGATGAACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | GACTTCTATTCTTTGTACACCCTCAGCCATGGAACAAGTACTTTCCTTTCTCTTACAGCTCTGCTCCTTTaGAGTAGCCTCCTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFYSLYTLSHGTSTFLSLTALLL*SSLLCL Trigger: CAGGCAAAGGAGGCTACTGCAAAGGAGCAGAGCTGT...AAGAGAAAGGAAAGTACTTGTTCCATGGCTGAGGGTGTACAAAGAATAGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | ACTCATCCCCTGACTTCTATTCTTTGTACACCCTCAGCCATGGAACAAGTACTTCTCGGCTATACTCAGTaGAGGGGCAATTTTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: THPLTSILCTPSAMEQVLLGYTQ*RGNFTG Trigger: TCCAGTAAAATTGCCCCTGCACTGAGTATAGCCGAG...AAGTACTTGTTCCATGGCTGAGGGTGTACAAAGAATAGAAGTCAGGGGATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAACAGCTCTCTTTTTCAAGCCTTTGGAGATGGTGTTTTAGCTAAGTGGCAGAATCTTGTCCTGTaGCTCGGCTATACTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNSSLFQAFGDGVLAKWQNLVL*LGYTQC Trigger: GCACTGAGTATAGCCGAGGCACAGGACAAGATTCTG...CCACTTAGCTAAAACACCATCTCCAAAGGCTTGAAAAAGAGAGCTGTTCAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216545.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGATATCCACATATTCTTTaGGCACTTGCTGGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSQGNKTSSPQQSTCQRYPHIL*ALAGDL Trigger: AAGATCCCCAGCAAGTGCCCAAAGAATATGTGGATA...TCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTGATGCTGGCTCTTGATGCCTTCCCAGTTCTTACCAGGCTTTCCCCAGTGCCAAAAATAATGTaGAGGAACTTCTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTLMLALDAFPVLTRLSPVPKIM*RNFCML Trigger: AAGCATGCAGAAGTTCCTCCACATTATTTTTGGCAC...TGGGGAAAGCCTGGTAAGAACTGGGAAGGCATCAAGAGCCAGCATCAAAGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTATTTCCCTCTTGAGGATGGCTTATCTTTTGAAGGCAGGTGGAGTAAAAGCCTTCTTCAATCTCTaGGGAAGGGGCTGGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FIISLLRMAYLLKAGGVKAFFNL*GRGWLT Trigger: AGTGAGCCAGCCCCTTCCCCAGAGATTGAAGAAGGC...TTTTACTCCACCTGCCTTCAAAAGATAAGCCATCCTCAAGAGGGAAATAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAACAGCTCTCTTTTTCAAGCCTTTGGAGATGGTGTTTTAGCTAAGTGGGGGACTTCTGCTGGCTaGATTCTCAGTAACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLNSSLFQAFGDGVLAKWGTSAG*ILSNFV Trigger: GACAAAGTTACTGAGAATCCAGCCAGCAGAAGTCCC...CCACTTAGCTAAAACACCATCTCCAAAGGCTTGAAAAAGAGAGCTGTTCAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216545.2 |
||
| 3UTR CAA 72 bp | TATCCGCAAGTTTGCTATATTATTCTTGCCAGAATCTaGTGGAGGGATCCCCACTCATCCCCTGACTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YPQVCYIILARI*WRDPHSSPDFY Trigger: ATAGAAGTCAGGGGATGAGTGGGGATCCCTCCACAAGATTCTGGCAAGAATAATATAGCAAACTTGCGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR TCA 90 bp | ACTCATCCCCTGACTTCTATTCTTTGTACACCCTCAGCCATGGAACAAGTACTTACTTCTAGCCACCTCTaGACTAGTGTGCCAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: THPLTSILCTPSAMEQVLTSSHL*TSVPKI Trigger: TATTTTTGGCACACTAGTTCAGAGGTGGCTAGAAGT...AAGTACTTGTTCCATGGCTGAGGGTGTACAAAGAATAGAAGTCAGGGGATGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTTACAAATGTGCAATCAAGACAGAATGGGTGTTGGTCTTACTTCAGGTACGCAGGATGGTTTCTTTaGTCAGTTCAGACAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTNVQSRQNGCWSYFRYAGWFL*SVQTVV Trigger: CACCACTGTCTGAACTGAGCAAAGAAACCATCCTGC...GTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR GCA 90 bp | TTACAAATGTGCAATCAAGACAGAATGGGTGTTGGTCTTACTTCAGGTACTAATCAGAATCTTGTCCTGTaGCTCGGCTATACTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQMCNQDRMGVGLTSGTNQNLVL*LGYTQC Trigger: GCACTGAGTATAGCCGAGGCACAGGACAAGATTCTG...ATTAGTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTTAAGCCAGAACCCTCCCAGTCACATCAGAGTGTAATGTACAGTTACGGGTCATTAGCAGGATaGTTTCTTTGCTCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFKPEPSQSHQSVMYSYGSLAG*FLCSVQ Trigger: CTGAACTGAGCAAAGAAACCATCCTGCTAATGACCC...GTAACTGTACATTACACTCTGATGTGACTGGGAGGGTTCTGGCTTAAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAGGCTAGTGCCAAAAATAATGTaGAGGAACTTCTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAIHMPKTMETGTHANRLVPKIM*RNFCML Trigger: AAGCATGCAGAAGTTCCTCCACATTATTTTTGGCAC...TAGCCTATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACTATGGAAACAGGTACACATGCAAATAGGCTATGTAGCTCCGTCATGCATCATGTCTGTACTTaGAAAAGATACTCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PKTMETGTHANRLCSSVMHHVCT*KRYSQE Trigger: TTCTTGTGAGTATCTTTTCCAAGTACAGACATGATG...CATGACGGAGCTACATAGCCTATTTGCATGTGTACCTGTTTCCATAGTCTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTATTTCCCTCTTGAGGATGGCTTATCTTTTGAAGGCAGGTGGAGTAAAATACTTCAACAATCAATaGCAGAGATGTGGGCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: FIISLLRMAYLLKAGGVKYFNNQ*QRCGHR Trigger: TCGGTGCCCACATCTCTGCCATTGATTGTTGAAGTA...TTTTACTCCACCTGCCTTCAAAAGATAAGCCATCCTCAAGAGGGAAATAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTATTTCCCTCTTGAGGATGGCTTATCTTTTGAAGGCAGGTGGAGTAAAACTCACAAGAATAAGGTaGATCCAGTCAGGATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FIISLLRMAYLLKAGGVKLTRIR*IQSGSD Trigger: ATCAGATCCTGACTGGATCCACCTTATTCTTGTGAG...TTTTACTCCACCTGCCTTCAAAAGATAAGCCATCCTCAAGAGGGAAATAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGTGCAATCAAGACAGAATGGGTGTTGGTCTTACTTCAGGTACTAATTATCCACATATTCTTTaGGCACTTGCTGGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQMCNQDRMGVGLTSGTNYPHIL*ALAGDL Trigger: AAGATCCCCAGCAAGTGCCCAAAGAATATGTGGATA...ATTAGTACCTGAAGTAAGACCAACACCCATTCTGTCTTGATTGCACATTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 72 bp | ACTGAGACCAAATACGTAACTTGCCATGCAATTCTGTaGATAGAAGGAAAGTTACAAATCCAAAACGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TETKYVTCHAIL*IEGKLQIQNAF Trigger: AAATGCGTTTTGGATTTGTAACTTTCCTTCTATCAACAGAATTGCATGGCAAGTTACGTATTTGGTCTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 72 bp | TTTAAGGAACAGAAAGTAAAATCTGTATCCGCAAGTTaGCTATATTATTCTTGCCAGAATCTTGTGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKEQKVKSVSAS*LYYSCQNLVEG Trigger: TCCCTCCACAAGATTCTGGCAAGAATAATATAGCAAACTTGCGGATACAGATTTTACTTTCTGTTCCTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 72 bp | ATATTTATTATTTCCCTCTTGAGGATGGCTTATCTTTaGAAGGCAGGTGGAGTAAAAGTGTGTCCTCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: IFIISLLRMAYL*KAGGVKVCPLI Trigger: TATAAGAGGACACACTTTTACTCCACCTGCCTTCAAAAGATAAGCCATCCTCAAGAGGGAAATAATAAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| 3UTR CAA 72 bp | TTTGATATATCCTTGGTTATATTTATTATTTCCCTCTaGAGGATGGCTTATCTTTTGAAGGCAGGTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FDISLVIFIISL*RMAYLLKAGGV Trigger: TACTCCACCTGCCTTCAAAAGATAAGCCATCCTCAAGAGGGAAATAATAAATATAACCAAGGATATATCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CCA 90 bp | GGGCTACCACAGCTTTGTCCAGCAGACCGCTATCCACATATTCTTTaGGCACTTGCTGGGGATCTTTATCCGGGACTTCTGCTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLPQLCPADRYPHIL*ALAGDLYPGLLLAG Trigger: TCCAGCCAGCAGAAGTCCCGGATAAAGATCCCCAGCAAGTGCCCAAAGAATATGTGGATAGCGGTCTGCTGGACAAAGCTGTGGTAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS CCA 90 bp | CTTCAACCACAACGTGGCGTCCAGTCCTCGTCTCCAGGTGGGGCTTaGGCACTAACTCTTTTAGTATCAAGTTCACAATGCCACGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQPQRGVQSSSPGGA*ALTLLVSSSQCHVH Trigger: ATGCACGTGGCATTGTGAACTTGATACTAAAAGAGTTAGTGCCCAAGCCCCACCTGGAGACGAGGACTGGACGCCACGTTGTGGTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGGCTACCACAGCTTaGTCCAGCAGACCGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: CSQGNKTSSPQQSTCQRLWATTA*SSRPLS Trigger: GGATAGCGGTCTGCTGGACAAAGCTGTGGTAGCCCA...TAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CAA 90 bp | GACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATCAGCTCAGCCGACACTaGTTCACTCCCAGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLLSAAIHMPKTMETGTHQLSRH*FTPRIS Trigger: AGAAATCCTGGGAGTGAACAAGTGTCGGCTGAGCTG...ATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CAA 90 bp | GGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGAGTGTACTGGGGCTGTaGCTGGAGAAGATGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GNKTSSPQQSTCQRLWKQSVLGL*LEKMLF Trigger: GAAAAGCATCTTCTCCAGCAACAGCCCCAGTACACT...CTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CAA 90 bp | GCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAGGCTATGGGCTACCACAGCTTaGTCCAGCAGACCGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: AAIHMPKTMETGTHANRLWATTA*SSRPLS Trigger: GGATAGCGGTCTGCTGGACAAAGCTGTGGTAGCCCA...TAGCCTATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTTCCAGTGGACACAGACTGTTCTGCCTTTATTCCTGGCCTCCTAAGGACTACACAGCCACTTCCATaGCTCCATCAACAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IFPVDTDCSAFIPGLLRTTQPLP*LHQQQE Trigger: CTCCTGCTGTTGATGGAGCAATGGAAGTGGCTGTGT...AGTCCTTAGGAGGCCAGGAATAAAGGCAGAACAGTCTGTGTCCACTGGAAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTCTCAAGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACAGCTCAGCCGACACTaGTTCACTCCCAGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FCSQGNKTSSPQQSTCQRQLSRH*FTPRIS Trigger: AGAAATCCTGGGAGTGAACAAGTGTCGGCTGAGCTG...TCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCTTGAGAACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS CCA 90 bp | GTAATAACTTCAACCACAACGTGGCGTCCAGTCCTCGTCTCCAGGTaGGGCTTGGGCACTAACTCTTTTAGTATCAAGTTCACAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VITSTTTWRPVLVSR*GLGTNSFSIKFTMP Trigger: TGGCATTGTGAACTTGATACTAAAAGAGTTAGTGCCCAAGCCCCACCTGGAGACGAGGACTGGACGCCACGTTGTGGTTGAAGTTATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CAA 90 bp | TATAAAATGAAGCATAGGGAAGTTCTCTGGGCTGCAGGCATGAAAAGATCCCTTAGAGGTGTCATCTCCTaGCTCCACCTCCTTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YKMKHREVLWAAGMKRSLRGVIS*LHLLVC Trigger: GCAGACAAGGAGGTGGAGCAAGGAGATGACACCTCT...AAGGGATCTTTTCATGCCTGCAGCCCAGAGAACTTCCCTATGCTTCATTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAACAAGACCTCCTCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAATATTCTTTGGGCACTaGCTGGGGATCTTTATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKQDLLSAAIHMPKTMETIFFGH*LGIFIR Trigger: CCGGATAAAGATCCCCAGCAAGTGCCCAAAGAATAT...TGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGAGGAGGTCTTGTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCGCAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAAGGCAGTACAGAATCTaGTCCTGTGCCTCGGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: SPQQSTCQRLWKQVHMQIRQYRI*SCASAI Trigger: TATAGCCGAGGCACAGGACAAGATTCTGTACTGCCT...TATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTGCGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAGGCTATACACAGCCACTTCCATaGCTCCATCAACAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QQSTCQRLWKQVHMQIGYTQPLP*LHQQQE Trigger: CTCCTGCTGTTGATGGAGCAATGGAAGTGGCTGTGT...ATAGCCTATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAAATTGCCAGAAAGAGCTCAGTATCCACCCATCTCTCCTCTTCTTACAAAGAGACAGCCATCTTCTaGAGGCTTCCTGGGGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LEIARKSSVSTHLSSSYKETAIF*RLPGES Trigger: AGATTCCCCAGGAAGCCTCAAGAAGATGGCTGTCTC...TTTGTAAGAAGAGGAGAGATGGGTGGATACTGAGCTCTTTCTGGCAATTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CAA 90 bp | TATAGCAAGGCTAGAGCTACACAACACAGACCTCCTGAGCTGAGGGTTGGCTATAGTGGTAAGATGACATaGCAAGTAATAACTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: YSKARATQHRPPELRVGYSGKMT*QVITST Trigger: GGTTGAAGTTATTACTTGCAATGTCATCTTACCACT...ATAGCCAACCCTCAGCTCAGGAGGTCTGTGTTGTGTAGCTCTAGCCTTGCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAATCCACATGCCAAAGACTATGGAAACAGGTACACATGCAAATAGGCTATATATTCTTTGGGCACTaGCTGGGGATCTTTATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QQSTCQRLWKQVHMQIGYIFFGH*LGIFIR Trigger: CCGGATAAAGATCCCCAGCAAGTGCCCAAAGAATAT...ATAGCCTATTTGCATGTGTACCTGTTTCCATAGTCTTTGGCATGTGGATTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAAATTGCCAGAAAGAGCTCAGTATCCACCCATCTCTCCTCTTCTTACAAAACCATGAATGGTTTCTaGACAAAGGCAATCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEIARKSSVSTHLSSSYKTMNGF*TKAIRA Trigger: TGCTCGGATTGCCTTTGTCAAGAAACCATTCATGGT...TTTGTAAGAAGAGGAGAGATGGGTGGATACTGAGCTCTTTCTGGCAATTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CCA 72 bp | TCTGTCTCCGTTCCCGGGCCACTCTTGTTGAGCTCTTaGGCTACCACAGCTTTGTCCAGCAGACCGCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SVSVPGPLLLSS*ATTALSSRPLS Trigger: GGATAGCGGTCTGCTGGACAAAGCTGTGGTAGCCCAAGAGCTCAACAAGAGTGGCCCGGGAACGGAGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS TCA 72 bp | GGAGACAGCCATCTTCTTGAGGCTTCCTGGGGAATCTaGGGCAGAGGTAGCTGGGGCACACTCTTCAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GDSHLLEASWGI*GRGSWGTLFNR Trigger: TCTGTTGAAGAGTGTGCCCCAGCTACCTCTGCCTCAGATTCCCCAGGAAGCCTCAAGAAGATGGCTGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CAA 72 bp | GGGCTGGCTCACTGGAGGTCAAGTGTACTGGGGCTGTaGCTGGAGAAGATGCTTTTCCTACTGGCAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLAHWRSSVLGL*LEKMLFLLADS Trigger: AGAGTCTGCCAGTAGGAAAAGCATCTTCTCCAGCAACAGCCCCAGTACACTTGACCTCCAGTGAGCCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CAA 72 bp | GTCCAGCAGACCGCTATCCACATATTCTTTGGGCACTaGCTGGGGATCTTTATCCGGGACTTCTGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VQQTAIHIFFGH*LGIFIRDFCWL Trigger: CAGCCAGCAGAAGTCCCGGATAAAGATCCCCAGCAAGTGCCCAAAGAATATGTGGATAGCGGTCTGCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS CAA 72 bp | GGGCCACTCTTGTTGAGCTCTTGGGCTACCACAGCTTaGTCCAGCAGACCGCTATCCACATATTCTTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPLLLSSWATTA*SSRPLSTYSLG Trigger: GCCCAAAGAATATGTGGATAGCGGTCTGCTGGACAAAGCTGTGGTAGCCCAAGAGCTCAACAAGAGTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS CCA 72 bp | CAACGTGGCGTCCAGTCCTCGTCTCCAGGTGGGGCTTaGGCACTAACTCTTTTAGTATCAAGTTCACAATGC | + |
|
Preference number: 6 (lower is better) Translates to: QRGVQSSSPGGA*ALTLLVSSSQC Trigger: GCATTGTGAACTTGATACTAAAAGAGTTAGTGCCCAAGCCCCACCTGGAGACGAGGACTGGACGCCACGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CCA 72 bp | TCAACCACAACGTGGCGTCCAGTCCTCGTCTCCAGGTaGGGCTTGGGCACTAACTCTTTTAGTATCAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: STTTWRPVLVSR*GLGTNSFSIKF Trigger: GAACTTGATACTAAAAGAGTTAGTGCCCAAGCCCCACCTGGAGACGAGGACTGGACGCCACGTTGTGGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CCA 72 bp | AAGATGACATTGCAAGTAATAACTTCAACCACAACGTaGCGTCCAGTCCTCGTCTCCAGGTGGGGCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KMTLQVITSTTT*RPVLVSRWGLG Trigger: GCCCAAGCCCCACCTGGAGACGAGGACTGGACGCCACGTTGTGGTTGAAGTTATTACTTGCAATGTCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CCA 72 bp | TGGCTCACTGGAGGTCAAGTGTACTGGGGCTGTTGCTaGAGAAGATGCTTTTCCTACTGGCAGACTCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: WLTGGQVYWGCC*RRCFSYWQTLY Trigger: GTAGAGAGTCTGCCAGTAGGAAAAGCATCTTCTCCAGCAACAGCCCCAGTACACTTGACCTCCAGTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CAA 90 bp | ACTTCAACCACAACGTGGCGTCCAGTCCTCGTCTCCAGGTGGGGCTaGGGCACTAACTCTTTTAGTATCAAGTTCACAATGCCACGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSTTTWRPVLVSRWG*GTNSFSIKFTMPRA Trigger: TGCACGTGGCATTGTGAACTTGATACTAAAAGAGTTAGTGCCCAAGCCCCACCTGGAGACGAGGACTGGACGCCACGTTGTGGTTGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CCA 72 bp | CAGCTTTGTCCAGCAGACCGCTATCCACATATTCTTTaGGCACTTGCTGGGGATCTTTATCCGGGACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLCPADRYPHIL*ALAGDLYPGLL Trigger: CAGAAGTCCCGGATAAAGATCCCCAGCAAGTGCCCAAAGAATATGTGGATAGCGGTCTGCTGGACAAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164099.3 ENSMUST00000216545.2 |
||
| CDS CAA 72 bp | ACAACGTGGCGTCCAGTCCTCGTCTCCAGGTGGGGCTaGGGCACTAACTCTTTTAGTATCAAGTTCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: TTWRPVLVSRWG*GTNSFSIKFTM Trigger: CATTGTGAACTTGATACTAAAAGAGTTAGTGCCCAAGCCCCACCTGGAGACGAGGACTGGACGCCACGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||
| CDS CCA 72 bp | TGTCAGAAAGGAAGTTGCCTGGGGTCATTAGCAGGATaGTTTCTTTGCTCAGTTCAGACAGTGGTGACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CQKGSCLGSLAG*FLCSVQTVVTP Trigger: TGGAGTCACCACTGTCTGAACTGAGCAAAGAAACCATCCTGCTAATGACCCCAGGCAACTTCCTTTCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164099.3 |
||